View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18162_high_40 (Length: 236)
Name: NF18162_high_40
Description: NF18162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18162_high_40 |
 | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
| [»] scaffold0285 (1 HSPs) |
| | |
|
| [»] scaffold0054 (2 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
| [»] scaffold1770 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 51064794 - 51064661
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
51064794 |
tattctctaaaatggacaagtattgtgaaacagacggagtatgtagtttaaattttgaatgatcgatttttgatttattacaacttaaatgtattgtatg |
51064695 |
T |
|
| Q |
101 |
caatataatttatatattttagtttattttgacg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
51064694 |
caatataatttatatattttagtttattttgacg |
51064661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 27133144 - 27133234
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
27133144 |
tatgtagtttaaattttgaatgatcggtttttgatttattacgacttaaatatgttgtatttaatatgatctatatattttagtttatttt |
27133234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 3288154 - 3288021
Alignment:
| Q |
41 |
atgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatata-ttttagtttattt----tgacgg |
135 |
Q |
| |
|
|||| ||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||| |
|
|
| T |
3288154 |
atgtggtttaaattttaaatgattaatttttggtttattacaacttaaatgtgttatatgcaatataatttatatatttttagtttatttttgatggcgg |
3288055 |
T |
|
| Q |
136 |
ctaccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
| ||||||||||||||| ||||| || ||||||| |
|
|
| T |
3288054 |
ccaccccaaacttttttgtctggctccgccactg |
3288021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 181579 - 181695
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt----tgacgg |
135 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||| |||||||||| || |||||||| | |||||||||||||||||| ||| || ||| |
|
|
| T |
181579 |
tatgtagtttaaattttgaatgatcgatttttggtttattacgacttaaatgtattatatgcaatgtgatttatatattttagttttttttttatggcgg |
181678 |
T |
|
| Q |
136 |
ctaccccaaactttttt |
152 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
181679 |
ccaccccaaactttttt |
181695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 16763957 - 16763868
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt |
129 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
16763957 |
tatgtagtttaaattttgaacgattcgtttttggtttattacgacttaaatgtattgtatgcaatatgatttatatattttggtttattt |
16763868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 47074471 - 47074391
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatatttta |
121 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
47074471 |
tatgtagtttaaattttgaatgatcaatttttggtttattacaa-ttaaatgtgttgcatgcaatataatttatatatttta |
47074391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 4692758 - 4692834
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatat |
117 |
Q |
| |
|
||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
4692758 |
tatgtagtttacattt-gaatgatcgatttttgatttattacaacttaaatgtgttgtatggaatatgatttatatat |
4692834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 48491667 - 48491580
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggctaccccaaacttttttatctgg |
158 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| |||| | ||||||||||||| ||||| |
|
|
| T |
48491667 |
tttattacaacttaagtgtgttgtaaacaatatgatttatatattttagtttattttgatggcggccatcccaaacttttttgtctgg |
48491580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 25537791 - 25537849
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
25537791 |
tttattacaacttaaatgttttatatacaatataatttatatattttaatttattttga |
25537849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 10801060 - 10800976
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttg |
131 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||| || ||||| | ||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
10801060 |
tatgtagtttaaattttgaacgatcggttt-------attacgacctaaatatattgtatgcaatatgatttatatattttggtttattttg |
10800976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 284570 - 284611
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
284570 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
284611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24771946 - 24771905
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
24771946 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
24771905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40783697 - 40783656
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
40783697 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
40783656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 321863 - 321903
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
321863 |
tattctctaaaatggacaagtattatgaaacggagggagta |
321903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 8920046 - 8920098
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgt |
92 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| | ||||||||||||||||||| |
|
|
| T |
8920046 |
tatgtaatttaaattttgaatgatcgactttcggtttattacaacttaaatgt |
8920098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23045319 - 23045279
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
23045319 |
tattctctaaaatggacaagtattatgaaacggagggagta |
23045279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 51064995 - 51065033
Alignment:
| Q |
3 |
ttctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
51064995 |
ttctttaaaatggacaagtattgtgaaacggagggagta |
51065033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 51286652 - 51286690
Alignment:
| Q |
92 |
tgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
51286652 |
tgttgtatacaatatgatttatatattttagtttatttt |
51286690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 2622087 - 2622030
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || ||| || ||||||||||||||| |
|
|
| T |
2622087 |
atttattacaacttaaattcgttgtatgcaacatgattcctacattttagtttatttt |
2622030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33082981 - 33083022
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
33082981 |
tattctttaaaatggacaagtattatgaaacggagggagtat |
33083022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 41148177 - 41148120
Alignment:
| Q |
75 |
ttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||| ||||||||| ||| | |||||||||||| ||||||||||| |
|
|
| T |
41148177 |
ttattacaacttaaacgtgttgtatacaaagtggtttatatatttttgtttattttga |
41148120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 51064643 - 51064599
Alignment:
| Q |
173 |
tatagattagtgattttgaccttgccaagaagaggctgaaatgaaa |
218 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
51064643 |
tatatattagtgattt-gaccttgccaagaagaggctgaaacgaaa |
51064599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 11868 - 11736
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |||| |
|
|
| T |
11868 |
tatgtagtttaaattttgaatgatcgttttttggtttattacaacttaaatgtgttatatgcaatatgatttatatattttagtttattttaattgcggc |
11769 |
T |
|
| Q |
137 |
taccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
||||||||| ||||| ||||| || ||||||| |
|
|
| T |
11768 |
caccccaaacctttttgtctggctccgccactg |
11736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 43946355 - 43946487
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
43946355 |
tatgtagtttaaattttgaatgatcgatttttgatttattttgacttaaatgtgttgtaaccaatatgatttatatattttagtttattttgatggcggc |
43946454 |
T |
|
| Q |
137 |
taccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
|| ||||||||||||| ||||| |||||||||| |
|
|
| T |
43946455 |
tatcccaaacttttttgtctggctctgccactg |
43946487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 55121314 - 55121433
Alignment:
| Q |
36 |
ggagtatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga--- |
132 |
Q |
| |
|
||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
55121314 |
ggagtatgttgtttagattttgaatgatcgatttttgatttattacaagttaaatgtgttgcatgcaatataatttatatattttaatttattttgatgg |
55121413 |
T |
|
| Q |
133 |
cggctaccccaaactttttt |
152 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
55121414 |
cggccaccccaaactttttt |
55121433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 21496813 - 21496901
Alignment:
| Q |
44 |
tagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21496813 |
tagtttaaattttgaatgatcaatttttggtttattaaaacttaaatgtgttgtatgcaatatgatttatatattttagtttattttga |
21496901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 14195292 - 14195159
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttgacggc--- |
136 |
Q |
| |
|
||||||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
14195292 |
tatgtagtttaaattttaaatgattgatttttagtttattacaacttaaatgagttgtatgcaatatgatttatatattttagtttattttgatggcagt |
14195193 |
T |
|
| Q |
137 |
taccccaaacttttttatctggttctgccactga |
170 |
Q |
| |
|
||||||||||||||| |||| || |||||||| |
|
|
| T |
14195192 |
caccccaaacttttttgtctgactccgccactga |
14195159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 54788994 - 54789081
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttgacg |
134 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
54788994 |
tttaaattttgaatgatcgatttttggtttattacaacttaaatatgttatattcaatatggtttatatattttagtttattttgacg |
54789081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 8425290 - 8425210
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
8425290 |
tttaaattttgaatgatcgatttttggtttattac---ttaaatatgttgtatgaaatatgatttatatattttagtctatttt |
8425210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 19971990 - 19971910
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
19971990 |
tttaaattttgaatgatcgatttttggtttattac---ttaaatatgttgtatgaaatatgatttatatattttagtctatttt |
19971910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 38000520 - 38000464
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttg |
96 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
38000520 |
tatgtagtttaaattttgaatgatcgatttttggtatattacaacttaaatgtgttg |
38000464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19241708 - 19241667
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
19241708 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
19241667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29375369 - 29375410
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
29375369 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
29375410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36881517 - 36881558
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
36881517 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
36881558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13365080 - 13365120
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
13365080 |
tattctctaaaatggacaagtattatgaaacggagggagta |
13365120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46694150 - 46694110
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
46694150 |
tattctctaaaatggacaagtattatgaaacggagggagta |
46694110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 2736713 - 2736752
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
2736713 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
2736752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 22126484 - 22126445
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
22126484 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
22126445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 40925759 - 40925798
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
40925759 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
40925798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 37293469 - 37293436
Alignment:
| Q |
9 |
aaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
37293469 |
aaaatggacaagtattgtgaaacggagggagtat |
37293436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 18355900 - 18355868
Alignment:
| Q |
9 |
aaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
18355900 |
aaaatggacaagtattgtgaaacggagggagta |
18355868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32835029 - 32834989
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
32835029 |
tattctctacaatggacaagtattatgaaacggagggagta |
32834989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 19647117 - 19647250
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttga-tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cgg |
135 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19647117 |
tatgtagtttaaattttgaatgaacgatttttttgtttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttgatggcgg |
19647216 |
T |
|
| Q |
136 |
ctaccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
||||||||||||||| |||| |||||||||| |
|
|
| T |
19647217 |
gcaccccaaacttttttgtctgactctgccactg |
19647250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 35635048 - 35634958
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
35635048 |
tatgtagtttaaattttgaatgatcgttttttggtttattacaacttaaatgtgttatatgcaatatgatttatatattttagtttatttt |
35634958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 19663105 - 19663013
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
19663105 |
tatgtagtttaaattttgaataatcgatttttgatttattacaacttaaatgtgttgtatacaatatagattatatattttagtttattttga |
19663013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 37259277 - 37259386
Alignment:
| Q |
43 |
gtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttgacggctacccc |
142 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | || | |
|
|
| T |
37259277 |
gtagtttacattttgaatgatcgacttttggtttattacaacttaaatatgttgtatgcaatatgatttatatattttagtttattttgacgccgacaac |
37259376 |
T |
|
| Q |
143 |
aaactttttt |
152 |
Q |
| |
|
|||||||||| |
|
|
| T |
37259377 |
aaactttttt |
37259386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 38352107 - 38352191
Alignment:
| Q |
46 |
gtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
38352107 |
gtttaaattttgaatgatcgatttttggtttattacaacttaaatgtgttgtatgcaatatgattcatatattttagtttatttt |
38352191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 19676920 - 19676827
Alignment:
| Q |
40 |
tatgtagtttaaatttt-gaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||| || ||| || |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
19676920 |
tatgtagtttaaatttttgattgaccgatttttggtttattacaacttaaatgtgttgtacgcaatataaattatatattttagtttattttga |
19676827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 38395109 - 38394981
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | |||| |
|
|
| T |
38395109 |
tatgtagtttaaattttgaatgatcgttttttagtttat----acttaaatgtgttatatgcaatatgatttatatattttagtttattttaattgcggc |
38395014 |
T |
|
| Q |
137 |
taccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
||||||||| ||||| ||||| || ||||||| |
|
|
| T |
38395013 |
caccccaaacctttttgtctggctccgccactg |
38394981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 34438463 - 34438381
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggctaccccaaactttttt |
152 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
34438463 |
atttattacaacttaaatttgttgtatgcaatatgatttatatattttagtttattttgaaggcggccaccccaaactttttt |
34438381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 42740330 - 42740241
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
42740330 |
tatgtagtttaaattttgaatgatcgattttttgtttattatgacttaa-tgtgttgtatgcaatatgatttatatattttagtttttttt |
42740241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 11776070 - 11776156
Alignment:
| Q |
44 |
tagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||| | | |||| |||||| |||||||||||||||||||||||| |
|
|
| T |
11776070 |
tagtttaaattttgaatgatcgatttttgatttattacaaattaaa--tatcgtatacaatatcttttatatattttagtttattttga |
11776156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 29086286 - 29086362
Alignment:
| Q |
42 |
tgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatatt |
118 |
Q |
| |
|
|||||| |||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
| T |
29086286 |
tgtagtataaattttgaatgatcagtttttggtttattacgacttaaatatgttgtatgcaatatgttttatatatt |
29086362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 7349570 - 7349629
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
7349570 |
atttattacaagttaaatgtgttgtatacaatatgatttatatattttagtttattttga |
7349629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 29556887 - 29556788
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggctaccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
|||||||||||||||||| |||||||||||| || |||| ||| |||| ||||||||||| ||| || |||||||||||| ||||| |||||||||| |
|
|
| T |
29556887 |
atttattacaacttaaatttgttgtatgcaacatgatttttatcttttggtttattttgatggcggtcactccaaacttttttgtctggctctgccactg |
29556788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12806893 - 12806852
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
12806893 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
12806852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30720532 - 30720491
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
30720532 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
30720491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36561139 - 36561099
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
36561139 |
tattctctaaaatggacaagtattatgaaacggagggagta |
36561099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40886650 - 40886610
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
40886650 |
tattctctaaaatggacaagtattatgaaacggagggagta |
40886610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 22270324 - 22270285
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
22270324 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
22270285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 15302661 - 15302623
Alignment:
| Q |
82 |
aacttaaatgtgttgtatgcaatataatttatatatttt |
120 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
15302661 |
aacttaaatgtgttgtatacaatatgatttatatatttt |
15302623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23097764 - 23097723
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
23097764 |
tattctccaaaatggacaagtattatgaaacggaaggagtat |
23097723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25773886 - 25773919
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacgga |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
25773886 |
tattctctaaaatggacaagtattatgaaacgga |
25773919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 734379 - 734347
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacgg |
33 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
734379 |
tattctccaaaatggacaagtattgtgaaacgg |
734347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 21744539 - 21744499
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatta |
80 |
Q |
| |
|
||||||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
21744539 |
tatgtagtttaaattttgaataatcgatttttggtttatta |
21744499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25683269 - 25683229
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
25683269 |
tattctccaaaatggacaagtattatgaaacggagggagta |
25683229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 24535184 - 24535092
Alignment:
| Q |
41 |
atgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttgac |
133 |
Q |
| |
|
||||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24535184 |
atgtagtttaaattttgaatgatcgatttttggtgtattacaacttaaatgtgttatatgtaatataatttatatattttagtttattttgac |
24535092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 43335391 - 43335299
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
43335391 |
tatgtagtttaaattttgaatgatcggtttttggtatattacaacttaaatgtgttgtatgcaatatgattcatatattttagtttactttga |
43335299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 7114371 - 7114463
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
7114371 |
tatgtaatttaaattttgaatgatcgatttttagtttattacaacttaaatgtattgtatgcaatataatttatatattttagttcattttga |
7114463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 16401175 - 16401296
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||| |
|
|
| T |
16401175 |
tatgtagtttaaattttgaatgttcgattttcggtttattacaacttaaatgtgttgtatgcaatatgatttatatatttaactttattttgatggaggc |
16401274 |
T |
|
| Q |
137 |
taccccaaacttttttatctgg |
158 |
Q |
| |
|
|||| ||||||||||| ||||| |
|
|
| T |
16401275 |
tacctcaaacttttttgtctgg |
16401296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 44504869 - 44504961
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
44504869 |
tatgtagtttaaattttaaatgattgatttttgatttattacgacttaaatgtgttgtatgtaatatgatttatatattttaatttattttga |
44504961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 27599661 - 27599740
Alignment:
| Q |
53 |
ttttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||| || ||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
27599661 |
ttttgaatgatcgattattggtttattacaacttaaatgtattgtatgcaatatgatttatttattttagtttattttga |
27599740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 53816199 - 53816126
Alignment:
| Q |
53 |
ttttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagttta |
126 |
Q |
| |
|
||||||||||||| |||||| ||||||| || |||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
53816199 |
ttttgaatgatcgctttttggtttattaaaatttaaatatgttgtatgaaatatgatttatatattttagttta |
53816126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14261281 - 14261323
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtatg |
43 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
14261281 |
tattctctaaaatggacaagtattatgaaacggagggagtatg |
14261323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21310658 - 21310699
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
21310658 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
21310699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24706287 - 24706246
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
24706287 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
24706246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25704888 - 25704929
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
25704888 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
25704929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44569074 - 44569115
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
44569074 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
44569115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 9816430 - 9816500
Alignment:
| Q |
102 |
aatataatttatatattttagtttattttga---cggctaccccaaacttttttatctggttctgccactg |
169 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||| || ||||||| |
|
|
| T |
9816430 |
aatatgatttatatattttagtttattttgatggcggtcaccccaaacttttttgtctggctccgccactg |
9816500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12071797 - 12071837
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
12071797 |
tattctctaaaatggacaagtattatgaaacggagggagta |
12071837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 14797319 - 14797280
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
14797319 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
14797280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21661575 - 21661537
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggag |
39 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
21661575 |
tattctctaaaatggacaagtattatgaaacggagggag |
21661537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21670339 - 21670301
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggag |
39 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
21670339 |
tattctctaaaatggacaagtattatgaaacggagggag |
21670301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 55405152 - 55405217
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatat |
115 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| |||||||| ||||||||| ||||| |||||||| |
|
|
| T |
55405152 |
tttaaattttgaatgatcaatttttggtttatt---acttaaatatgttgtatgaaatatgatttatat |
55405217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22321308 - 22321267
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
22321308 |
tattctctaaaatagacaagtattatgaaacggagggagtat |
22321267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40122527 - 40122494
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacgga |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
40122527 |
tattctctaaaatggacaagtattatgaaacgga |
40122494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19692959 - 19692999
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
19692959 |
tattctctaaaatagacaagtattgtgatacggatggagta |
19692999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19703544 - 19703584
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
19703544 |
tattctctaaaatagacaagtattgtgatacggatggagta |
19703584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 39295418 - 39295454
Alignment:
| Q |
6 |
tctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
39295418 |
tctaaaatggacaagtattatgaaacggaaggagtat |
39295454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 5885410 - 5885318
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| |
|
|
| T |
5885410 |
tatgtagtttaaattttgaatgattggtttttggtttattacaacttaaatgtgttgtatgcaatatgattcatatgttttagtttattttga |
5885318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 41318232 - 41318351
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
41318232 |
tatgtagtttaaattttaaatgatcgattttttgtttattacaacttaaatgtgtt-tatgcaatatgatttatatattttagtttattttgatggcggc |
41318330 |
T |
|
| Q |
137 |
taccccaaacttttttatctg |
157 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
41318331 |
caccccaaacttttttgtctg |
41318351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 5088804 - 5088884
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
5088804 |
tttaaattttgaatgatcgatttttggtttattac---ttaaatatgttgtatgaaatatgatttatatattttagtctatttt |
5088884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 43327750 - 43327820
Alignment:
| Q |
57 |
gaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
43327750 |
gaatgatcgatttttggtttattac---ttaaatatgttgtatgaaatatgatttatatattttagtctatttt |
43327820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22388178 - 22388137
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
22388178 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
22388137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23367026 - 23367067
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
23367026 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
23367067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 17738061 - 17738017
Alignment:
| Q |
42 |
tgtagtttaaattttgaatgatcggtttttgatttattacaactt |
86 |
Q |
| |
|
|||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
17738061 |
tgtattttaaattttgaatgatcgttttttggtttattacaactt |
17738017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37673783 - 37673743
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
37673783 |
tattctctaaaatggacaagtattatgaaacggaaggagta |
37673743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 19258429 - 19258386
Alignment:
| Q |
89 |
atgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||| |||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
19258429 |
atgtattgtatacaatatgatttatatattttagtttattttga |
19258386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1102738 - 1102779
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| ||||||| |
|
|
| T |
1102738 |
tattctctcaaatggacaagtattatgaaacggagggagtat |
1102779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3519144 - 3519177
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacgga |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
3519144 |
tattctctaaaatggacaagtattatgaaacgga |
3519177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39938407 - 39938448
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| ||||||| |
|
|
| T |
39938407 |
tattctctaaaatggacaagtattataaaacggagggagtat |
39938448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1646524 - 1646564
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| |||||| |
|
|
| T |
1646524 |
tattctctaaaatggacaggtattatgaaacggagggagta |
1646564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12969780 - 12969740
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
12969780 |
tattctccaaaatggacaagtattatgaaacggagggagta |
12969740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40756951 - 40756911
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
40756951 |
tattctccaaaatggacaagtattatgaaacggagggagta |
40756911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 17264566 - 17264488
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatatt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17264566 |
tatgtagtttaaattttgaatgatcggtttttgatttattacgacttaaatgtgttgtatacaatataatttatatatt |
17264488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 8363852 - 8363944
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||| | ||||| ||||||||||||||||||||||||| |
|
|
| T |
8363852 |
tatgtagtttaaattttgaatgatcgatttttggtttataacgacttaaatgtgttgtgtttaatatgatttatatattttagtttattttga |
8363944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 18295197 - 18295288
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||| |||||||| ||||||| |||||||||||||| |
|
|
| T |
18295197 |
tatgtagtttaaattttgaatgatcgattttttatttattactacttaaatgtattgtatacaatataa-ttatatacattagtttattttga |
18295288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 380774 - 380833
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
380774 |
atttattacaacttaaatttgttgtatgcaatatgatttatatattttagtttattttga |
380833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 19341096 - 19341175
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatt |
128 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||||||| |
|
|
| T |
19341096 |
tttaaatttggaatgatcgatttttgatttattacaacttaaatgtgt--tatacaatatgattcatatatttttgtttatt |
19341175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 37126754 - 37126834
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
37126754 |
tttaaattttgaatgatcgatttttggtttattac---ttaaatatgttgtatgaaatatgatttatatattttagtctatttt |
37126834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 3091437 - 3091516
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatatttta |
121 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||| || ||||| |||||| |||||||||||||| |
|
|
| T |
3091437 |
tatgtagtttaaattttgaatgatcgaatttttgtttattacaacttaaa--tgatgtattcaatatcatttatatatttta |
3091516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 21452096 - 21452038
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||| ||||||||||| ||||||||||||| |
|
|
| T |
21452096 |
tttattacgacttaaatgtgttgtgtttaatatgatttatatattatagtttattttga |
21452038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27814048 - 27814089
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
27814048 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
27814089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40349198 - 40349239
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
40349198 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
40349239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 12002246 - 12002188
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||| ||||||||||||||| | ||||| ||||||||||| ||||||||||||| |
|
|
| T |
12002246 |
tttattatgacttaaatgtgttgtgtttaatatgatttatatattatagtttattttga |
12002188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25614393 - 25614352
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||| ||||||| |
|
|
| T |
25614393 |
tattctctaaaatggacaattattatgaaacggagggagtat |
25614352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36453164 - 36453131
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacgga |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
36453164 |
tattctctaaaatggacaagtattatgaaacgga |
36453131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 20099084 - 20099216
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt---tgacggc |
136 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||| | |
|
|
| T |
20099084 |
tatgtagtttaa-ttttgaatgatcgatttttgattcattacaacttaaatgtattgtatgcaatatgaattatatattttagtttattttgatgacgac |
20099182 |
T |
|
| Q |
137 |
taccccaaacttttttatctggttctgccactga |
170 |
Q |
| |
|
|||||||||||||||| ||| || |||||||| |
|
|
| T |
20099183 |
caccccaaacttttttagctgactccgccactga |
20099216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 158
Target Start/End: Original strand, 18427758 - 18427879
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
|||||||||||||||||||| || | |||||| ||||| |||| |||||||||||||||||||||| | ||| |||||||| |||||||||| || | |
|
|
| T |
18427758 |
tatgtagtttaaattttgaacaattgatttttggtttataacaagttaaatgtgttgtatgcaatatgacttaaatattttattttattttgatggcgac |
18427857 |
T |
|
| Q |
137 |
taccccaaacttttttatctgg |
158 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
18427858 |
caccccaaacttttttgtctgg |
18427879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 32382338 - 32382444
Alignment:
| Q |
68 |
ttttgatttattacaacttaaatgtgttgtatgc-aatataatttatatattttagttta--ttttgacggctaccccaaacttttttatctggttctgc |
164 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||| |||| |||||||| |||||| ||||| || || |
|
|
| T |
32382338 |
ttttggtttattacaacttaaatgtgttgtatgcaaatatgatttatatattttattttatttttttgcggccaccccaaatttttttgtctggctccgc |
32382437 |
T |
|
| Q |
165 |
cactgaa |
171 |
Q |
| |
|
||||||| |
|
|
| T |
32382438 |
cactgaa |
32382444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 32436293 - 32436399
Alignment:
| Q |
68 |
ttttgatttattacaacttaaatgtgttgtatgc-aatataatttatatattttagttta--ttttgacggctaccccaaacttttttatctggttctgc |
164 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||| |||| |||||||| |||||| ||||| || || |
|
|
| T |
32436293 |
ttttggtttattacaacttaaatgtgttgtatgcaaatatgatttatatattttattttatttttttgcggccaccccaaatttttttgtctggctccgc |
32436392 |
T |
|
| Q |
165 |
cactgaa |
171 |
Q |
| |
|
||||||| |
|
|
| T |
32436393 |
cactgaa |
32436399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 35538784 - 35538694
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||| |||| || || ||| || |||||||||||||||||| |||||||||| ||| |||||||||||||| | |||||| |
|
|
| T |
35538784 |
tatgtagtttaaactttgcatattcaatttatggtttattacaacttaaatgagttgtatgcagtattatttatatattttaatctatttt |
35538694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11646365 - 11646324
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
11646365 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
11646324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30999564 - 30999523
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
30999564 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
30999523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36068317 - 36068358
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
36068317 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
36068358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43275439 - 43275398
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
43275439 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
43275398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7147150 - 7147190
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
7147150 |
tattctctaaaatggacaagtattatgaaacggagggagta |
7147190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37345808 - 37345848
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
37345808 |
tattctctaaaatggacaagtattatgaaacggaaggagta |
37345848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40058343 - 40058303
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
40058343 |
tattctctaaaatggacaagtattatgaaacggagggagta |
40058303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40918771 - 40918731
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
40918771 |
tattctctaaaatggacaagtattatgaaacggagggagta |
40918731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 4783418 - 4783469
Alignment:
| Q |
108 |
atttatatattttag-tttattt-tgacggctaccccaaacttttttatctg |
157 |
Q |
| |
|
||||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
4783418 |
atttatatattttagatttgtttatgacggctaccccaaacttttttatctg |
4783469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 42809742 - 42809781
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
42809742 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
42809781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 27919197 - 27919139
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
27919197 |
tttattacaatttaatcgtgttgtatagaatatgatttatatattttaatttattttga |
27919139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2539970 - 2539929
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
2539970 |
tattctttaaaatggacaagtattatgaaacggaaggagtat |
2539929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3585688 - 3585729
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
3585688 |
tattctctaaaatagacaagtattatgaaacggatggagtat |
3585729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35866850 - 35866891
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
35866850 |
tattctccaaaatagacaagtattgtgaaacggatggagtat |
35866891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 35866652 - 35866616
Alignment:
| Q |
3 |
ttctctaaaatggacaagtattgtgaaacggacggag |
39 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
35866652 |
ttctttaaaatggacaagtattgtgaaacggaaggag |
35866616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 20)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 25987990 - 25988081
Alignment:
| Q |
42 |
tgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgc-aatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||| |||| ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25987990 |
tgtagtttaaattttgaattatcgatttttaatttattacaacttaaatatgttgtatgcaaatataatttatatattttagtttattttga |
25988081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 10895037 - 10894959
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatatt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
10895037 |
tatgtagtttaaattttgaatgatcggtttttggtttattacgaattaaatgtgttgtatgcaatataatttatatatt |
10894959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 27156487 - 27156372
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggc |
136 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
27156487 |
tatgtagtttaaattttgaatgatcaatttttggcttattacaacttaaatgtgtagtatgcaatatgatttatatattttaatttattttgatggcggc |
27156388 |
T |
|
| Q |
137 |
taccccaaactttttt |
152 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
27156387 |
caccctaaactttttt |
27156372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 26092700 - 26092793
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatg-caatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
26092700 |
tatgtagtttaaattttgaattatcgatttttgatttattacaacataaatatgttgtatgtaaatatgatttatatattttagtttattttga |
26092793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 14113961 - 14113862
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga---cggctaccccaaacttttttatctggttctgccactga |
170 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||| ||||| ||||||||||| |
|
|
| T |
14113961 |
tttattactacttaaatgtgttctatgcaatatgatttatatattttagtttattttgatggcggcgatcccaaacttttttgtctggctctgccactga |
14113862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 6059841 - 6059753
Alignment:
| Q |
44 |
tagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
||||||||||||| |||||||| |||||| ||||||| ||||||||| |||| ||| |||||| |||||||||||||| |||||||||| |
|
|
| T |
6059841 |
tagtttaaattttaaatgatcgatttttggtttattataacttaaatatgttatatacaatatgatttatatattttaatttattttga |
6059753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 31709623 - 31709567
Alignment:
| Q |
73 |
atttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt |
129 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31709623 |
atttattacaacttaaatttgttgtatgcaatatgatttatatattttagtttattt |
31709567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 97375 - 97455
Alignment:
| Q |
47 |
tttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttatttt |
130 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| |||||| ||||||||| | ||| |||||||||||||||| |||||| |
|
|
| T |
97375 |
tttaaattttgaatgatcgatttttggtttattac---ttaaatatgttgtatgaagtatgatttatatattttagtctatttt |
97455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 17750063 - 17750129
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatat |
106 |
Q |
| |
|
|||||| || ||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
17750063 |
tatgtacttcaaattttgaatgatcaatttttaatttattttaacttaaatatgttgtatgcaatat |
17750129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 32398469 - 32398527
Alignment:
| Q |
74 |
tttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||| ||||||||||| ||||||||||||| |
|
|
| T |
32398469 |
tttattacgacttaaatgtgttgtgtttaatatgatttatatattatagtttattttga |
32398527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1605815 - 1605856
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
1605815 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
1605856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8626719 - 8626760
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
8626719 |
tattctctaaaatggacaagtattatgaaacggagggagtat |
8626760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13757444 - 13757485
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
13757444 |
tattctctaaaatggacaagtattatgaaacggatggagtat |
13757485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7761537 - 7761577
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
7761537 |
tattctctaaaatggacaagtattatgaaacggagggagta |
7761577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29260429 - 29260469
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
29260429 |
tattctctaaaatggacaagtattatgaaacggagggagta |
29260469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15064735 - 15064694
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
15064735 |
tattctccaaaatggacaagtattatgaaacggagggagtat |
15064694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17942680 - 17942721
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagtat |
42 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
17942680 |
tattctccaaaatggacaagtattatgaaacggagggagtat |
17942721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4129663 - 4129703
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4129663 |
tattttctaaaatggacaagtattatgaaacggagggagta |
4129703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 14200689 - 14200649
Alignment:
| Q |
92 |
tgttgtatgcaatataatttatatattttagtttattttga |
132 |
Q |
| |
|
|||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
14200689 |
tgttgtatgcaaaattatttatatattctagtttattttga |
14200649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31559778 - 31559738
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
31559778 |
tattctctaaaatggagaagtattatgaaacggagggagta |
31559738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0285 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0285
Description:
Target: scaffold0285; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 7803 - 7714
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt |
129 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
7803 |
tatgtagtttaaattttgaacgattcgtttttggtttattacgacttaaatgtattgtatgcaatatgatttatatattttggtttattt |
7714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 3552 - 3641
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttattacaacttaaatgtgttgtatgcaatataatttatatattttagtttattt |
129 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| |||||||| |||||||||| ||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
3552 |
tatgtagtttaaattttgaacgattcgtttttggtttattacgacttaaatgtattgtatgcattatgatttatatattttggtttattt |
3641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45690 - 45730
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
45690 |
tattctctaaaatggacaagtattatgaaacggagggagta |
45730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 42412 - 42451
Alignment:
| Q |
40 |
tatgtagtttaaattttgaatgatcggtttttgatttatt |
79 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
42412 |
tatgtagtttaaattttgaatgattggtttttggtttatt |
42451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1770 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1770
Description:
Target: scaffold1770; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 398 - 438
Alignment:
| Q |
1 |
tattctctaaaatggacaagtattgtgaaacggacggagta |
41 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
398 |
tattttctaaaatggacaagtattatgaaacggagggagta |
438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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