View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18164_low_12 (Length: 253)
Name: NF18164_low_12
Description: NF18164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18164_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 25273471 - 25273224
Alignment:
| Q |
1 |
atggtggaagtgtttgtcagcggttagtttaaagttaaaacgacgacggtgtggagagcgaggtcgccagagtggatagcaagagagaatgatttgctaa |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25273471 |
atggtggaagtgtttgtcagcggtaagtttaaagttaaaacgacgatggcgtggagagcgaggtcgccagagtggatagcaagagagaatgatttgctaa |
25273372 |
T |
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| Q |
101 |
tggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttannnnnnnatgatttcctttctct |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
25273371 |
tggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttatttttttatgatttcctttctct |
25273272 |
T |
|
| Q |
201 |
ctcaaacaaatatttcatatggcctttgtttttgttttgatgatgatg |
248 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
25273271 |
ctcaaacaaatatttcatatggcatttgtttttgttttgatgatgatg |
25273224 |
T |
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