View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18166_high_10 (Length: 273)
Name: NF18166_high_10
Description: NF18166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18166_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 34365197 - 34364970
Alignment:
| Q |
33 |
acgtttccaccatcagattctgattgagttagaactcttgtcatcagaaaccttcatttttattttatgatggatgatattattcttagggaagtgtcac |
132 |
Q |
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| T |
34365197 |
acgtatccacaatcagattctgattgagttagaactcttgtcttcagaaaccttcattttt-ttttatgatggatgatattattcttagggaagtgtcac |
34365099 |
T |
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| Q |
133 |
acaacttgtggaataactgaatatatgacaaaatgcttgtaggtcagttaacactgagcctaatctagacagacaagggtttgatgat-ggaatgtcaaa |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
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| T |
34365098 |
acaacttgtggaataactgaatatatgacaaaatgcttgtaggtcagttaacactgagcctaatctagacagacaggggtttgatgatgggaatgtcaaa |
34364999 |
T |
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| Q |
232 |
actcaaaatttcaatcctccattatagta |
260 |
Q |
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|||||| ||||||||| ||||||| |||| |
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| T |
34364998 |
actcaatatttcaatcttccattagagta |
34364970 |
T |
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