View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18168_high_2 (Length: 514)

Name: NF18168_high_2
Description: NF18168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18168_high_2
NF18168_high_2
[»] chr3 (53 HSPs)
chr3 (296-489)||(32901867-32902075)
chr3 (296-434)||(42644211-42644349)
chr3 (2-139)||(32901535-32901672)
chr3 (2-139)||(42643860-42643997)
chr3 (148-225)||(32901719-32901796)
chr3 (300-422)||(52736716-52736839)
chr3 (300-435)||(30301202-30301336)
chr3 (148-225)||(42644044-42644122)
chr3 (300-435)||(44225517-44225653)
chr3 (300-422)||(53567883-53568007)
chr3 (300-373)||(50671880-50671953)
chr3 (304-435)||(25181166-25181298)
chr3 (324-399)||(32932162-32932238)
chr3 (300-434)||(10852727-10852862)
chr3 (335-435)||(7012627-7012728)
chr3 (427-472)||(42644357-42644402)
chr3 (300-399)||(4486764-4486864)
chr3 (300-423)||(23918794-23918918)
chr3 (300-471)||(29252102-29252270)
chr3 (387-451)||(23496357-23496421)
chr3 (387-451)||(50664798-50664862)
chr3 (402-449)||(5407011-5407058)
chr3 (300-434)||(21023229-21023364)
chr3 (387-434)||(25129481-25129528)
chr3 (382-449)||(35058445-35058512)
chr3 (391-434)||(48089632-48089675)
chr3 (404-451)||(55154558-55154605)
chr3 (382-451)||(10853264-10853333)
chr3 (387-452)||(31084247-31084312)
chr3 (402-471)||(51285681-51285750)
chr3 (167-216)||(52736488-52736537)
chr3 (403-451)||(835963-836011)
chr3 (387-451)||(3348283-3348347)
chr3 (407-447)||(30300923-30300963)
chr3 (387-450)||(7899120-7899183)
chr3 (388-451)||(19877458-19877521)
chr3 (388-451)||(42484425-42484488)
chr3 (407-449)||(36302301-36302343)
chr3 (383-449)||(41459251-41459317)
chr3 (391-436)||(3776622-3776667)
chr3 (409-450)||(14022091-14022132)
chr3 (387-451)||(16246093-16246155)
chr3 (406-451)||(44939413-44939458)
chr3 (395-448)||(46018693-46018746)
chr3 (402-451)||(48189439-48189488)
chr3 (407-451)||(8424727-8424771)
chr3 (387-451)||(10334178-10334242)
chr3 (387-451)||(21225030-21225094)
chr3 (387-451)||(26519704-26519768)
chr3 (383-443)||(33548342-33548402)
chr3 (387-451)||(38172304-38172368)
chr3 (387-451)||(52966806-52966870)
chr3 (427-471)||(53568026-53568070)
[»] scaffold0015 (1 HSPs)
scaffold0015 (300-434)||(65452-65587)
[»] chr8 (26 HSPs)
chr8 (311-434)||(29970773-29970897)
chr8 (319-434)||(19649165-19649281)
chr8 (303-449)||(39219684-39219831)
chr8 (316-420)||(35550198-35550302)
chr8 (300-422)||(12124757-12124880)
chr8 (301-394)||(35239434-35239527)
chr8 (387-471)||(2778609-2778693)
chr8 (402-471)||(2071545-2071614)
chr8 (402-451)||(2778338-2778387)
chr8 (382-451)||(3467576-3467645)
chr8 (387-452)||(40742172-40742237)
chr8 (387-451)||(22936790-22936854)
chr8 (387-451)||(31246312-31246376)
chr8 (379-435)||(36779431-36779487)
chr8 (387-451)||(41289055-41289119)
chr8 (384-451)||(24183841-24183908)
chr8 (404-451)||(36121542-36121589)
chr8 (388-434)||(10552923-10552969)
chr8 (187-225)||(29970606-29970644)
chr8 (381-451)||(36108636-36108706)
chr8 (430-471)||(10368118-10368159)
chr8 (300-396)||(15115682-15115779)
chr8 (387-451)||(32767485-32767547)
chr8 (319-435)||(38715222-38715339)
chr8 (427-471)||(32994131-32994175)
chr8 (387-435)||(38516346-38516394)
[»] chr7 (37 HSPs)
chr7 (300-471)||(38494189-38494361)
chr7 (300-420)||(16353401-16353521)
chr7 (300-434)||(20088842-20088977)
chr7 (319-422)||(4228539-4228643)
chr7 (387-447)||(40561687-40561747)
chr7 (387-471)||(45557461-45557545)
chr7 (300-422)||(37148623-37148746)
chr7 (387-449)||(29829296-29829358)
chr7 (383-449)||(44967385-44967451)
chr7 (387-451)||(10371942-10372006)
chr7 (300-411)||(33936844-33936956)
chr7 (389-449)||(41841180-41841240)
chr7 (387-451)||(48459771-48459835)
chr7 (364-471)||(1766463-1766570)
chr7 (364-451)||(38230106-38230193)
chr7 (387-449)||(33853411-33853473)
chr7 (387-451)||(3342851-3342915)
chr7 (387-451)||(3622444-3622508)
chr7 (383-431)||(26975301-26975349)
chr7 (387-451)||(37639491-37639555)
chr7 (387-451)||(42752175-42752239)
chr7 (386-434)||(44570682-44570730)
chr7 (364-451)||(39634149-39634236)
chr7 (387-449)||(3750747-3750809)
chr7 (383-421)||(38510377-38510415)
chr7 (425-471)||(40491726-40491772)
chr7 (387-449)||(45823267-45823329)
chr7 (388-449)||(42740454-42740515)
chr7 (386-451)||(46541660-46541725)
chr7 (387-451)||(12964659-12964723)
chr7 (387-423)||(15311228-15311264)
chr7 (387-435)||(16079463-16079511)
chr7 (408-448)||(36270832-36270872)
chr7 (387-451)||(37562631-37562695)
chr7 (391-471)||(40422893-40422973)
chr7 (387-451)||(41715718-41715782)
chr7 (387-451)||(47021980-47022044)
[»] chr5 (24 HSPs)
chr5 (300-471)||(32560248-32560419)
chr5 (300-422)||(43152386-43152509)
chr5 (300-434)||(3748864-3748999)
chr5 (308-435)||(22811000-22811128)
chr5 (300-421)||(19204028-19204150)
chr5 (300-435)||(2868363-2868499)
chr5 (319-449)||(24036559-24036689)
chr5 (387-451)||(22482243-22482307)
chr5 (387-451)||(18637379-18637443)
chr5 (386-433)||(7667751-7667798)
chr5 (383-434)||(14299418-14299469)
chr5 (387-450)||(19784867-19784930)
chr5 (300-351)||(33740851-33740902)
chr5 (324-434)||(43045185-43045296)
chr5 (387-449)||(2483710-2483772)
chr5 (383-449)||(15368565-15368630)
chr5 (307-420)||(37036733-37036844)
chr5 (408-451)||(2694754-2694797)
chr5 (383-420)||(28973949-28973986)
chr5 (402-451)||(33953896-33953945)
chr5 (387-451)||(3667908-3667972)
chr5 (387-435)||(5969957-5970005)
chr5 (387-451)||(35760243-35760307)
chr5 (405-449)||(42439566-42439610)
[»] chr1 (44 HSPs)
chr1 (300-435)||(4346950-4347086)
chr1 (300-421)||(7765311-7765433)
chr1 (300-425)||(7335903-7336029)
chr1 (300-435)||(5930736-5930872)
chr1 (307-420)||(36447705-36447818)
chr1 (387-451)||(20800275-20800339)
chr1 (387-451)||(35569200-35569264)
chr1 (344-451)||(40352411-40352518)
chr1 (391-451)||(47978359-47978419)
chr1 (405-449)||(28287260-28287304)
chr1 (388-452)||(47085898-47085962)
chr1 (313-423)||(47981821-47981931)
chr1 (364-434)||(32365120-32365190)
chr1 (363-449)||(49178215-49178301)
chr1 (364-449)||(25061267-25061352)
chr1 (387-451)||(1199891-1199955)
chr1 (427-471)||(3515957-3516001)
chr1 (382-434)||(5268310-5268362)
chr1 (387-435)||(13344837-13344885)
chr1 (387-451)||(31223438-31223502)
chr1 (387-451)||(42850217-42850281)
chr1 (404-451)||(25230087-25230134)
chr1 (387-434)||(29759715-29759762)
chr1 (387-450)||(48510972-48511035)
chr1 (387-449)||(4369803-4369864)
chr1 (383-449)||(5410699-5410765)
chr1 (383-449)||(49242982-49243048)
chr1 (402-447)||(6932113-6932158)
chr1 (402-451)||(10470668-10470717)
chr1 (364-449)||(11561863-11561948)
chr1 (402-451)||(12247498-12247547)
chr1 (387-432)||(28464939-28464984)
chr1 (300-373)||(29438562-29438635)
chr1 (402-471)||(34571088-34571157)
chr1 (383-444)||(50751233-50751294)
chr1 (389-449)||(3134656-3134716)
chr1 (427-471)||(5167381-5167425)
chr1 (389-445)||(6752789-6752845)
chr1 (427-471)||(7765247-7765291)
chr1 (387-451)||(7826352-7826416)
chr1 (383-435)||(13056057-13056109)
chr1 (427-471)||(15477340-15477384)
chr1 (387-451)||(27801650-27801714)
chr1 (383-451)||(45710109-45710176)
[»] chr2 (37 HSPs)
chr2 (300-449)||(23359927-23360077)
chr2 (311-434)||(12110847-12110970)
chr2 (300-378)||(37543866-37543944)
chr2 (311-434)||(1763192-1763316)
chr2 (300-423)||(23377465-23377589)
chr2 (303-431)||(11005706-11005836)
chr2 (387-450)||(10918652-10918715)
chr2 (300-422)||(14531978-14532092)
chr2 (364-451)||(31224706-31224793)
chr2 (300-435)||(5055130-5055266)
chr2 (387-451)||(1945034-1945098)
chr2 (402-446)||(29968937-29968981)
chr2 (300-422)||(42770420-42770541)
chr2 (387-450)||(3853949-3854012)
chr2 (383-434)||(4119369-4119420)
chr2 (388-443)||(4894090-4894145)
chr2 (404-451)||(14821228-14821275)
chr2 (308-413)||(29844146-29844252)
chr2 (300-435)||(26806266-26806400)
chr2 (387-451)||(9988496-9988560)
chr2 (387-451)||(25747877-25747940)
chr2 (387-451)||(30007548-30007612)
chr2 (387-471)||(30503303-30503387)
chr2 (404-451)||(5916237-5916284)
chr2 (404-451)||(36312342-36312389)
chr2 (383-442)||(38600447-38600506)
chr2 (387-449)||(7632521-7632583)
chr2 (404-434)||(37402198-37402228)
chr2 (388-449)||(3476356-3476417)
chr2 (402-451)||(8170376-8170425)
chr2 (387-420)||(15220817-15220850)
chr2 (408-449)||(32827620-32827661)
chr2 (387-451)||(2213555-2213619)
chr2 (387-451)||(7295343-7295407)
chr2 (387-451)||(34433301-34433365)
chr2 (427-471)||(37745789-37745833)
chr2 (387-431)||(41031465-41031508)
[»] chr4 (55 HSPs)
chr4 (300-446)||(20676987-20677133)
chr4 (319-471)||(22699698-22699851)
chr4 (300-422)||(14597650-14597773)
chr4 (319-449)||(22980701-22980832)
chr4 (319-449)||(22994288-22994419)
chr4 (308-449)||(46957968-46958110)
chr4 (300-434)||(20231919-20232055)
chr4 (379-471)||(36150621-36150713)
chr4 (300-363)||(38306201-38306264)
chr4 (300-413)||(1589629-1589743)
chr4 (300-435)||(28947762-28947898)
chr4 (382-449)||(33843802-33843869)
chr4 (300-371)||(40286226-40286297)
chr4 (388-451)||(42944895-42944958)
chr4 (382-451)||(33574198-33574267)
chr4 (387-451)||(16566330-16566394)
chr4 (383-451)||(54488626-54488694)
chr4 (404-451)||(32238056-32238103)
chr4 (387-434)||(53532002-53532049)
chr4 (388-451)||(55638752-55638815)
chr4 (387-449)||(48045679-48045741)
chr4 (383-449)||(54153066-54153131)
chr4 (387-444)||(27045554-27045611)
chr4 (404-449)||(37500205-37500250)
chr4 (170-222)||(1589908-1589960)
chr4 (387-451)||(46830066-46830130)
chr4 (387-451)||(48550424-48550488)
chr4 (387-451)||(51922965-51923029)
chr4 (403-446)||(2206260-2206303)
chr4 (388-451)||(26651845-26651908)
chr4 (387-449)||(4954050-4954112)
chr4 (387-449)||(13167550-13167612)
chr4 (402-436)||(26617281-26617315)
chr4 (384-422)||(32634099-32634137)
chr4 (188-222)||(38306435-38306469)
chr4 (387-449)||(39438886-39438948)
chr4 (383-449)||(41751199-41751265)
chr4 (387-449)||(41866179-41866241)
chr4 (387-449)||(50357973-50358035)
chr4 (387-449)||(52062977-52063039)
chr4 (382-419)||(17898085-17898122)
chr4 (385-434)||(46507979-46508028)
chr4 (387-451)||(19599493-19599556)
chr4 (319-371)||(28658051-28658103)
chr4 (408-452)||(28752560-28752604)
chr4 (387-451)||(29149304-29149368)
chr4 (387-451)||(38306036-38306100)
chr4 (387-451)||(39187759-39187823)
chr4 (387-451)||(39636810-39636874)
chr4 (389-449)||(39672982-39673042)
chr4 (387-451)||(43772120-43772184)
chr4 (382-434)||(45471083-45471135)
chr4 (387-451)||(48550242-48550306)
chr4 (387-451)||(49519755-49519819)
chr4 (387-471)||(54487197-54487281)
[»] scaffold0009 (1 HSPs)
scaffold0009 (300-435)||(199382-199518)
[»] scaffold0005 (1 HSPs)
scaffold0005 (300-422)||(219605-219728)
[»] scaffold0172 (1 HSPs)
scaffold0172 (311-434)||(15271-15394)
[»] chr6 (18 HSPs)
chr6 (300-435)||(3605764-3605900)
chr6 (387-452)||(16442346-16442411)
chr6 (387-447)||(882782-882842)
chr6 (304-376)||(28020523-28020594)
chr6 (381-449)||(34911033-34911100)
chr6 (402-449)||(2234144-2234191)
chr6 (404-451)||(6208060-6208107)
chr6 (388-451)||(17829995-17830058)
chr6 (407-471)||(34026390-34026454)
chr6 (387-438)||(3816374-3816425)
chr6 (387-446)||(28466914-28466973)
chr6 (387-446)||(34620982-34621041)
chr6 (387-446)||(34736760-34736819)
chr6 (387-446)||(34748419-34748478)
chr6 (383-449)||(16122000-16122066)
chr6 (388-434)||(25208723-25208769)
chr6 (387-435)||(16548179-16548227)
chr6 (387-451)||(21254876-21254939)
[»] scaffold0394 (1 HSPs)
scaffold0394 (404-449)||(5829-5874)
[»] scaffold0184 (1 HSPs)
scaffold0184 (300-397)||(6914-7010)


Alignment Details
Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 296 - 489
Target Start/End: Original strand, 32901867 - 32902075
Alignment:
Q  296 ctactttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataa 395  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32901867 ctactttggtcattcacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataa 32901966  T
Q  396 atcacgttacattcaactcacttttaa---------------ctagaatcaattcactcaaaatcaattctcatcactgcataaccaaacaggcttagtc 480  Q
    ||||||||| ||| || ||||||||||                ||||||||||| |||||||||||||||||||||| ||||||| |||||  |||||||    
T  32901967 atcacgttatatttaattcacttttaattaaaatcaatttttatagaatcaattaactcaaaatcaattctcatcaccgcataacgaaacaaacttagtc 32902066  T
Q  481 acctaattc 489  Q
    |||||||||    
T  32902067 acctaattc 32902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 296 - 434
Target Start/End: Original strand, 42644211 - 42644349
Alignment:
Q  296 ctactttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataa 395  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  42644211 ctactttggtcatttacacacccaaaaacaattttaacacaaaatatccaaacaacatttttcctacaaatcatttttattataaaatatccaaacataa 42644310  T
Q  396 atcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  42644311 atcactttacattcaactcacttttaactaaaatcaatt 42644349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 32901535 - 32901672
Alignment:
Q  2 cattcacctatgtgagaaattcattactctgtatttctgttgactaaagtctgcgtcannnnnnngtgttgctgtgaannnnnnnggttgttgcagaaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||||||||       |||||||||||||||    
T  32901535 cattcacctatgtgagaaattcattactctgtatttctgttgactgaagtctgcgtcatttttttgtgttgctgtgaattcttttggttgttgcagaaat 32901634  T
Q  102 ttaaaggtagaagaagacactgtttggtggaaagtgtg 139  Q
     | ||||||||||||||||||||| | || ||||||||    
T  32901635 ctgaaggtagaagaagacactgttcgatgaaaagtgtg 32901672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 42643860 - 42643997
Alignment:
Q  2 cattcacctatgtgagaaattcattactctgtatttctgttgactaaagtctgcgtcannnnnnngtgttgctgtgaannnnnnnggttgttgcagaaat 101  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||       |||||||| |||        |||||||||||||||    
T  42643860 cattcacctatatgagaaattcattactctgtatttttgttgactgaagtctgcgtcatttttttgtgttgctttgattttttttggttgttgcagaaat 42643959  T
Q  102 ttaaaggtagaagaagacactgtttggtggaaagtgtg 139  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42643960 ttaaaggtagaagaagacactgttcggtggaaagtgtg 42643997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 32901719 - 32901796
Alignment:
Q  148 aattaatgtacgatcctgataaagcccactaattttttggttttataaaataataatatgaattttagttaccaaatg 225  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32901719 aattaatgtacgatcctgatagagcccactaattttttgattttataaaataataatatgaattttagttaccaaatg 32901796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 52736716 - 52736839
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    |||| ||||||||||| |||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||||| ||||| ||| |||||| |||||    
T  52736716 tttgatcatttacacaaccaaaagcaattttgacacaaaatatctaaacaacatatttcatacaaatcacttttattgtaaaagtatccaaacacaaatc 52736815  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || |||| | |||||||||||    
T  52736816 acttttcattaacctcacttttaa 52736839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 30301336 - 30301202
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |||| |||||||||||| |||||| ||   || ||||||||| ||    
T  30301336 tttggtcatttacacacccaaaagcaattttgacac--aatatccaaacaacatctttcatacaaatcacttctattatgaagggatccaaacataattc 30301239  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    ||  ||||||||||||||||||||  | |||||||||    
T  30301238 actatacattcaactcacttttaatcaaaatcaattc 30301202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 42644044 - 42644122
Alignment:
Q  148 aattaatgtacgatcctgataaagcccactaattttttgg-ttttataaaataataatatgaattttagttaccaaatg 225  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  42644044 aattaatgtacgatcttgataaagcccactaatttttttgattttattaaataataatatgaattttagttaccaaatg 42644122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 44225517 - 44225653
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    |||||||||||||||| |||||||||||||| |||   | ||||||||||||||||||| |||||| ||||||| || | |   ||| ||||||||||||    
T  44225517 tttggtcatttacacatccaaaagcaattttgacatcgagtatccaaacaacatttttcatacaaagcacttttgttgtgagggtatccaaacataaatc 44225616  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || ||||||| |||||||||||||| | |||||||||    
T  44225617 actttacattaaactcacttttaacgaaaatcaattc 44225653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 53567883 - 53568007
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaaca-tttttcctacaaatcacttttattataaa-atattcaaacataaat 397  Q
    |||||||||||||| | | |||||||||||| ||||||||||||||||||| | ||||||  |||||| |||| ||| |||||  ||| |||||||||||    
T  53567883 tttggtcatttacataacgaaaagcaattttgacacaaaatatccaaacaatattttttcgcacaaataacttctatcataaaggtatccaaacataaat 53567982  T
Q  398 cacgttacattcaactcacttttaa 422  Q
     || || ||||||||||||||||||    
T  53567983 tacttttcattcaactcacttttaa 53568007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 50671953 - 50671880
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcactttt 373  Q
    |||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |  |||||||||||    
T  50671953 tttgatcatttacacaaccaaaatcaattttaatacaaaatatccaaacaacatttttcatgtaaatcactttt 50671880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 435
Target Start/End: Original strand, 25181166 - 25181298
Alignment:
Q  304 gtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacgt 402  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||||| |||   ||||||||||||| |  | ||  ||| ||||||||||| |  |    
T  25181166 gtcatttaaacacccaaaatcaattttgacacaaaatatccaaacaacatattttaaacaaatcacttttgtggtgaaggtatccaaacataaataattt 25181265  T
Q  403 tacattcaactcacttttaactagaatcaattc 435  Q
    |||||| |||||||||||||  | |||||||||    
T  25181266 tacattaaactcacttttaatcaaaatcaattc 25181298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 399
Target Start/End: Complemental strand, 32932238 - 32932162
Alignment:
Q  324 caattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatca 399  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||| | |||||  |||||||||||||||||    
T  32932238 caattttgacacaaaatatccaaacaacatatttcatacaaatcacttttgtaataaaggtattcaaacataaatca 32932162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 10852862 - 10852727
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||| ||||||||   |||||||||| | || ||||| ||||||| |||||||||| || ||||||||||| || |  |  ||  ||||||||||||    
T  10852862 tttggtcttttacacatttaaaagcaattctgactcaaaacatccaaataacatttttcatataaatcacttttgttttggaggtagccaaacataaatc 10852763  T
Q  399 acgttacattcaactcacttttaactagaatcaatt 434  Q
    || |||||||||||||||||||||| | ||||||||    
T  10852762 actttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 7012627 - 7012728
Alignment:
Q  335 caaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttacattcaactcacttttaactagaatcaat 433  Q
    ||||| ||||||||||  |||||  |||||||||||||| || | ||  ||| |||||||||||||| |||||||||||||||||||||| | |||||||    
T  7012627 caaaacatccaaacaaatttttttatacaaatcacttttcttttgaaggtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaat 7012726  T
Q  434 tc 435  Q
    ||    
T  7012727 tc 7012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 42644357 - 42644402
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaacag 472  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  42644357 aatcaattcactcaaaatcaattctcatcaccgcataaccaaacag 42644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 399
Target Start/End: Original strand, 4486764 - 4486864
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    |||| ||||||||||||| |||||||||| | |||||||||||||| |||| ||||||| | ||||| || | | || ||||| ||||||||||||||||    
T  4486764 tttgatcatttacacaccaaaaagcaattgttacacaaaatatccacacaatatttttcatgcaaattacctatcttttaaaagtattcaaacataaatc 4486863  T
Q  399 a 399  Q
    |    
T  4486864 a 4486864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 23918794 - 23918918
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||| ||||||||   |||||||||| |  | ||||| |||| ||||||||||||| |  ||||||||||| || ||||  ||  ||||||||||||    
T  23918794 tttggtcttttacacatttaaaagcaattctgcctcaaaacatcctaacaacatttttcatctaaatcacttttgttttaaaggtaaccaaacataaatc 23918893  T
Q  399 acgttacattcaactcacttttaac 423  Q
    || ||||||||||||||||||||||    
T  23918894 actttacattcaactcacttttaac 23918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 29252270 - 29252102
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatca 399  Q
    |||||| ||||||| | |||||||||||||| || |||||| | |||||||||| |||| || |||||||||   || | ||  |  |||||||||||||    
T  29252270 tttggtaatttacatatccaaaagcaattttgacgcaaaattttcaaacaacatctttcatataaatcactt---ttttgaagcaggcaaacataaatca 29252174  T
Q  400 cgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
      ||||| | ||||||||||| |  | |||||||||| |||||||||||| | | | ||||| |||||||||    
T  29252173 atttacaattaactcacttttgatcaaaatcaattcaatcaaaatcaatttttaccgctgcagaaccaaaca 29252102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 23496357 - 23496421
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  23496357 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 23496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 50664798 - 50664862
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  50664798 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 50664862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 449
Target Start/End: Original strand, 5407011 - 5407058
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  5407011 ttaccttcaactcaattttagctagaatcaattcactcaaaatcaatt 5407058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 21023364 - 21023229
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| || ||||||||||||||||||  || |||||||||||||||   | ||||| || ||||||||| | || | ||| |||  |||||||||||    
T  21023364 tttggtctttcacacacccaaaagcaattcaaatacaaaatatccaaacgctagttttcataaaaatcacttctgttttgaaagtatctaaacataaatc 21023265  T
Q  399 acgttacattcaactcacttttaactagaatcaatt 434  Q
    || | | ||||||||||| |||||| | ||||||||    
T  21023264 acttcaaattcaactcacatttaaccaaaatcaatt 21023229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 25129528 - 25129481
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||    
T  25129528 caaacataaatcacgttacattcaactcacttttatcctgaatcaatt 25129481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 35058445 - 35058512
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||| |||||||||| ||| |||  |||||||||||||||  |||||||||| |||||||||||||||    
T  35058445 atatccaaacataaagcactttatcttcaactcacttttagttagaatcaatccactcaaaatcaatt 35058512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 48089675 - 48089632
Alignment:
Q  391 cataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  48089675 cataaatcattttacattcaactcacttttaactagaatcaatt 48089632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 55154558 - 55154605
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||||||    
T  55154558 acattcaactcacttttaactaaaatcaattctctcaaactcaattct 55154605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 451
Target Start/End: Complemental strand, 10853333 - 10853264
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||| |||||||||||||  ||| ||| |||||||||||||| | ||||||||| |||||| ||||||||    
T  10853333 atatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattct 10853264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 31084247 - 31084312
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctc 452  Q
    |||||||||||||  | |||||||||||||||||||  | |||||||||  |||||||||||||||    
T  31084247 caaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaattctc 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 51285681 - 51285750
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||||||||||||| | | ||| ||||||||||||||||||| |  |||| ||| |||||||||    
T  51285681 ttacattcaactcacttttagccataataaattcactcaaaatcaatttttctcaccgcaaaaccaaaca 51285750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 52736488 - 52736537
Alignment:
Q  167 taaagcccactaattttttggttttataaaataataatatgaattttagt 216  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| |||||    
T  52736488 taaagcccaataattttttaattttataaaataataatatgaatcttagt 52736537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 451
Target Start/End: Original strand, 835963 - 836011
Alignment:
Q  403 tacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  835963 tacattcaactcagttttatccagaatcaattcaatcaaaatcaattct 836011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 3348283 - 3348347
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |||||| |||||||||| |||| | |||||||||||| ||| ||||||||    
T  3348283 caaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattct 3348347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 447
Target Start/End: Complemental strand, 30300963 - 30300923
Alignment:
Q  407 ttcaactcacttttaactagaatcaattcactcaaaatcaa 447  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  30300963 ttcaactcacttttaaccagaatgaattcactcaaaatcaa 30300923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 7899183 - 7899120
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    ||||||||||||   ||||||||||||  |||||||||| |||||||||| || ||||||||||    
T  7899183 caaacataaatcgttttacattcaactatcttttaactaaaatcaattcattccaaatcaattc 7899120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 19877458 - 19877521
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||  |||||| ||||||||||||||| | |||||||||  ||||| ||||||||    
T  19877458 aaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattct 19877521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 42484488 - 42484425
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||| ||||||| |||| | |||| |||||||||| |||||||||||||||| ||| ||||||    
T  42484488 aaacacaaatcactttacctgcaacccacttttaaccagaatcaattcactcataattaattct 42484425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 36302301 - 36302343
Alignment:
Q  407 ttcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  36302301 ttcaactcaattttaaccggaatcaattcactcaaaatcaatt 36302343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 41459251 - 41459317
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||  |||  ||||| ||||||||||| | | |||||||| ||||||||||||    
T  41459251 tattcaaacataaatcaatttatcttcaaatcacttttaaccaaagtcaattcaatcaaaatcaatt 41459317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 436
Target Start/End: Original strand, 3776622 - 3776667
Alignment:
Q  391 cataaatcacgttacattcaactcacttttaactagaatcaattca 436  Q
    |||||||||| |||||||||||||| ||||| | ||||||||||||    
T  3776622 cataaatcactttacattcaactcaattttagccagaatcaattca 3776667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 14022091 - 14022132
Alignment:
Q  409 caactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    |||||||||||||  |||||| ||||||||||||||||||||    
T  14022091 caactcacttttagatagaataaattcactcaaaatcaattc 14022132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 16246155 - 16246093
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  ||||||  |||||||||||||||| ||||||||  |||||| ||||||||    
T  16246155 caaacataaatcaatttacatctaactcacttttaactaaaatcaatt--ctcaaactcaattct 16246093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 44939458 - 44939413
Alignment:
Q  406 attcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||  | |||||||||||||||| ||||||||    
T  44939458 attcaactcacttttaatcaaaatcaattcactcaaattcaattct 44939413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 46018693 - 46018746
Alignment:
Q  395 aatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaat 448  Q
    |||||| ||||  ||||||||  |||| ||||||||||||||||||||||||||    
T  46018693 aatcactttactatcaactcatctttagctagaatcaattcactcaaaatcaat 46018746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 48189488 - 48189439
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||||  | ||||||||| |||||| ||||||||    
T  48189488 ttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 48189439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 8424771 - 8424727
Alignment:
Q  407 ttcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||||||| | ||||||||| |||||| ||||||||    
T  8424771 ttcaactcacttttaaccaaaatcaattctctcaaactcaattct 8424727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 10334178 - 10334242
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | | |||||||| ||||||||| | ||||||||| |||||| ||||||||    
T  10334178 caaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaattct 10334242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 21225030 - 21225094
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||| ||||  ||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  21225030 caaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattct 21225094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 26519704 - 26519768
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||||||||||||||| |  | ||||||||| |||||| ||||||||    
T  26519704 caaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattct 26519768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 33548342 - 33548402
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaa 443  Q
    ||||||||||||||| || | | ||||||||| |||| ||||| |||||||||| ||||||    
T  33548342 tattcaaacataaattacttcatattcaactccctttaaactaaaatcaattcattcaaaa 33548402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 38172368 - 38172304
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| | ||||||||||||| | ||||||||| |||||| ||||||||    
T  38172368 caaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattct 38172304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 52966870 - 52966806
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||  || ||||||||||| | ||||||||| |||||||||||||||    
T  52966870 caaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattct 52966806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 53568026 - 53568070
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||||    
T  53568026 aatcaattcactcaaaatcaattttcatcatcgcataatcaaaca 53568070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 65452 - 65587
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||||| || | |  |||| ||||||||||||    
T  65452 tttggtcatttacacacccaaaatcaattttgacacaaagtatccaaacaatatttttcatacaaatcacttttgttgtgaggatatccaaacataaatc 65551  T
Q  399 acgttacattcaactcacttttaactagaatcaatt 434  Q
    || ||||||| |||||| ||||||| | ||||||||    
T  65552 actttacattaaactcatttttaaccaaaatcaatt 65587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 29970773 - 29970897
Alignment:
Q  311 acacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatcacgttacattc 409  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||| ||||||||| || |||| ||||  ||| |||||||||||||| ||| | ||    
T  29970773 acacacccaaaagcaattttaacataaaatattcaaataacatttttcatacaaatcatttctattgtaaaggtatccaaacataaatcactttaaactc 29970872  T
Q  410 aactcacttttaactagaatcaatt 434  Q
    |||||||||||||||| ||||||||    
T  29970873 aactcacttttaactaaaatcaatt 29970897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 19649165 - 19649281
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttacattcaactcact 417  Q
    |||||||||| | || ||||| |||||||||| ||||||| |||||||||||||| || | ||  ||| |||||||||||||| ||||||||||||||||    
T  19649165 aaaagcaattctgactcaaaacatccaaacaaaatttttcatacaaatcacttttgttttgaaggtatccaaacataaatcactttacattcaactcact 19649264  T
Q  418 tttaactagaatcaatt 434  Q
    |||||| | ||||||||    
T  19649265 tttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 449
Target Start/End: Original strand, 39219684 - 39219831
Alignment:
Q  303 ggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacg 401  Q
    |||||||||  || |||||||||||||| ||||  | ||||||||||||||||||| |||||| ||||||| || | |  |||| ||||||||||||||     
T  39219684 ggtcatttatgcatccaaaagcaattttgacaccgagtatccaaacaacatttttcatacaaagcacttttgttgtgaggatatccaaacataaatcact 39219783  T
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    | | ||| |||||||||||||| | |||||||||  ||||||| ||||    
T  39219784 tcatattaaactcacttttaacgaaaatcaattctatcaaaattaatt 39219831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 420
Target Start/End: Original strand, 35550198 - 35550302
Alignment:
Q  316 cccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttacattcaactca 415  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||  |||||||| || ||| ||  || |||||| ||||||| ||||| | ||||||    
T  35550198 cccaaaagcaattttgacacaaaatatccaaacaacatctttcgtatcaatcacttctactatgaagcatccaaacaaaaatcactttacactaaactca 35550297  T
Q  416 ctttt 420  Q
    |||||    
T  35550298 ctttt 35550302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 12124880 - 12124757
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    |||| ||||||||||| |||||| ||||||| ||| ||||||| | ||||||||||||| |  ||||||||| ||| |||||  ||| |||||||||||     
T  12124880 tttgatcatttacacaaccaaaatcaattttgacataaaatattcgaacaacatttttcatgtaaatcacttctatcataaaggtatccaaacataaata 12124781  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || ||||||||||||| ||||    
T  12124780 acttttcattcaactcactattaa 12124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 394
Target Start/End: Original strand, 35239434 - 35239527
Alignment:
Q  301 ttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacata 394  Q
    ||||||||||||||| |||||||||||| |||  ||||||||||||| | || ||||| || ||||||||||| || | || ||||||||||||    
T  35239434 ttggtcatttacacatccaaaagcaattctaatgcaaaatatccaaaaatcaattttcataaaaatcacttttgttttgaagtattcaaacata 35239527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 2778609 - 2778693
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||| ||||||||| |||  ||||||||||||||| ||||||||| |||||  |||||||||| |  || |||||||||||||||    
T  2778609 caaaaataaatcactttatcttcaactcacttttagctagaatcagttcacataaaatcaatttttgtcgctgcataaccaaaca 2778693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 2071614 - 2071545
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||||||||||||||||   | |||||||||  |||||||||||||||||| | ||| |||||||||    
T  2071614 ttacattcaactcacttttagtcaaaatcaattctgtcaaaatcaattctcatcgccgcagaaccaaaca 2071545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 2778387 - 2778338
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||    
T  2778387 ttacattcaactcacttttaagtaaaatcaatttattcaaaatcaattct 2778338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 451
Target Start/End: Original strand, 3467576 - 3467645
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||| |||||| ||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  3467576 atatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 3467645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 40742172 - 40742237
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctc 452  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||| |||||||||    
T  40742172 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctc 40742237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 22936854 - 22936790
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| | ||||||    
T  22936854 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattct 22936790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 31246376 - 31246312
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | |||||||||   |||||||||||||    
T  31246376 caaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattct 31246312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 36779431 - 36779487
Alignment:
Q  379 aaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    ||||||| ||||||||||| || |||||||||||||||||||||  | |||||||||    
T  36779431 aaaatatccaaacataaattactttacattcaactcacttttaatcaaaatcaattc 36779487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 41289119 - 41289055
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||| ||||||||||||||| || ||||||||| |||||| ||||||||    
T  41289119 caaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaattct 41289055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 24183841 - 24183908
Alignment:
Q  384 attcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||| ||||||||  || ||||||| ||| |||||   |||||||||||||||||||||||||||    
T  24183841 attcaaatataaatcatttttcattcaattcatttttattcagaatcaattcactcaaaatcaattct 24183908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 36121589 - 36121542
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||| | |||||||||||| ||| ||||||||    
T  36121589 acattcaactcacttttaaccaaaatcaattcacttaaactcaattct 36121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||||||||||  |||||||||||||||||||||| | ||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 29970606 - 29970644
Alignment:
Q  187 gttttataaaataataatatgaattttagttaccaaatg 225  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  29970606 gttttataagataataaaatgaattttagttaccaaatg 29970644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 451
Target Start/End: Original strand, 36108636 - 36108706
Alignment:
Q  381 aatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||| ||||||||||  ||||||| |||| |||||||  |  |||||||||||||||||| ||||||    
T  36108636 aatattcacacataaatcattttacattaaacttacttttacatgcaatcaattcactcaaaattaattct 36108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Original strand, 10368118 - 10368159
Alignment:
Q  430 caattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||||||||||||||| ||||||||  |||||||||    
T  10368118 caattcactcaaaatcaattcttatcactgcgaaaccaaaca 10368159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 15115779 - 15115682
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaa 396  Q
    ||||||||||| |  ||| |||||||||||| |||||   |||||||||||||||||   |||||||||||| | || |||| |||| ||||||||||    
T  15115779 tttggtcatttgcgtacctaaaagcaattttgacacactgtatccaaacaacattttatatacaaatcacttcttttgtaaagatatccaaacataaa 15115682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 32767485 - 32767547
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |||||| |||||||||||||   | |||||||||||||||||| ||||||    
T  32767485 caaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 32767547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 38715339 - 38715222
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatcacgttacattcaactcact 417  Q
    |||| |||||||||  |||| ||| ||||||| || |||  || ||||||||||| || | || |||  |||||||||||||| ||||| | |||||| |    
T  38715339 aaaatcaattttaatccaaattattcaaacaatatatttgttataaatcacttttgttgtgaagataaccaaacataaatcactttacacttaactcaat 38715240  T
Q  418 tttaactagaatcaattc 435  Q
    |||||||| |||||||||    
T  38715239 tttaactaaaatcaattc 38715222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 32994175 - 32994131
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||| |||| |||||||||||| ||||||||||| |||||||||    
T  32994175 aatcagttcattcaaaatcaattgtcatcactgcagaaccaaaca 32994131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 38516346 - 38516394
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||| |||||||||||||||| ||| | | |||||||||    
T  38516346 caaacataaatcactttacattcaactcactattatcgaaaatcaattc 38516394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 471
Target Start/End: Original strand, 38494189 - 38494361
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||||||||||||| ||||| ||||||| |||| |||||||||||||| || |||| |||||||||||| |||| | ||  ||  |||||||||| |    
T  38494189 tttggtcatttacacactcaaaaacaattttgacaccaaatatccaaacaaaatatttcatacaaatcacttctattgtgaaggtaaccaaacataaacc 38494288  T
Q  399 acgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    || | |||||||||||||||||||| | ||||||||||  ||||||||||| ||  ||| ||| |||||||||    
T  38494289 acttcacattcaactcacttttaaccaaaatcaattcaaacaaaatcaattttcgccaccgcacaaccaaaca 38494361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 420
Target Start/End: Original strand, 16353401 - 16353521
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatca 399  Q
    ||||||||||| |||||| |||||||||||| ||||| | ||||||||||||||||| | ||||||| | |||| |   || ||||||||||||||| ||    
T  16353401 tttggtcatttgcacacctaaaagcaattttgacacacagtatccaaacaacattttacatacaaattatttttttgcaaagatattcaaacataaacca 16353500  T
Q  400 cgttacattcaactcactttt 420  Q
    | ||| ||| |||||||||||    
T  16353501 ctttagattaaactcactttt 16353521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 20088842 - 20088977
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||||| | |||||||| |||||||||||||||||| |||||| | ||| |  | ||||  ||  ||||||||||||    
T  20088842 tttggtcttttacacatctaaaagcaattctgacacaaaacatccaaacaacatttttcatacaaagctcttctgctttaaaggtaaccaaacataaatc 20088941  T
Q  399 acgttacattcaactcacttttaactagaatcaatt 434  Q
    || |||| ||||||||||||||||| | ||||||||    
T  20088942 actttacgttcaactcacttttaaccaaaatcaatt 20088977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 4228539 - 4228643
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatcacgttacattcaactcact 417  Q
    |||||||||||| ||||||||||| |||||||||| |||| ||  |||||||| |||  ||||  ||| |||||||||||||| || |||||||||||||    
T  4228539 aaaagcaattttgacacaaaatattcaaacaacatctttcatatgaatcacttctatcttaaaggtatccaaacataaatcacttttcattcaactcact 4228638  T
Q  418 tttaa 422  Q
    |||||    
T  4228639 tttaa 4228643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 40561747 - 40561687
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaa 447  Q
    |||||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||||||    
T  40561747 caaacataaatcactttactttcaactcaatttttactagaatcaattcactcaaaatcaa 40561687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 45557461 - 45557545
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||| ||||||| |||| |||||||||||||||   |||||||||||| |||||||||||||   |||||||| |||||||||    
T  45557461 caaacacaaatcactttaccttcaactcacttttagtcagaatcaattcattcaaaatcaattcctgtcactgcaaaaccaaaca 45557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 37148746 - 37148623
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    |||||||||||||||| | |||| ||||||| ||| ||||||||||||||| ||  ||| |||||||||||| ||| | |||  ||| |||||| |||||    
T  37148746 tttggtcatttacacaacgaaaatcaattttgacataaaatatccaaacaatatcattcatacaaatcacttctatcacaaagctatccaaacagaaatc 37148647  T
Q  399 acgttacattcaactcacttttaa 422  Q
    |  || ||||||||||| ||||||    
T  37148646 atttttcattcaactcatttttaa 37148623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 29829358 - 29829296
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||| |||||||||||||| ||||| | |||||||||||| ||| ||||||||    
T  29829358 caaacataaatcactttacattcaactcatttttagccagaatcaattcattcagaatcaatt 29829296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 44967451 - 44967385
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||    
T  44967451 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 44967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 10372006 - 10371942
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  10372006 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 10371942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 411
Target Start/End: Complemental strand, 33936956 - 33936844
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||| | | |  ||||| |||||||||||||||||| |||||||||||||| || | ||  ||  ||||||||||||    
T  33936956 tttggtcttttacacatctaaaagcaagtctgattcaaaacatccaaacaacatttttcatacaaatcacttttgttttgaaggtaagcaaacataaatc 33936857  T
Q  399 acgttacattcaa 411  Q
    || ||||||||||    
T  33936856 actttacattcaa 33936844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 41841180 - 41841240
Alignment:
Q  389 aacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||| |||||||||| ||||||| || || |||||||||| ||||||||||||    
T  41841180 aacataaatcactttacattcaagtcactttcaagtaaaatcaattcattcaaaatcaatt 41841240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 48459771 - 48459835
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  48459771 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 48459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 471
Target Start/End: Original strand, 1766463 - 1766570
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcata 463  Q
    ||||||||||||  |||  ||| |||| ||||||||  |||  ||||||||||||||||  | |||||||| | ||||||||||||||| ||||  ||||    
T  1766463 aatcacttttatgttaaggtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatttaatcaaaatcaattctcgtcacaacata 1766562  T
Q  464 accaaaca 471  Q
    ||||||||    
T  1766563 accaaaca 1766570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 38230106 - 38230193
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||| || ||  ||| |||||||||||||  | |||||||||||||||||||| | ||||||||| || ||| ||||||||    
T  38230106 aatcacttttaataaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattct 38230193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 33853473 - 33853411
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||| |||  ||||||||||| ||| | |||||||||||||| ||||||||||    
T  33853473 caaacataaatcactttagcttcaactcactcttagccagaatcaattcactaaaaatcaatt 33853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 3342851 - 3342915
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | | || ||||||||||||||||| ||||||||| |||||| ||||||||    
T  3342851 caaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattct 3342915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 3622508 - 3622444
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||| ||||||||    
T  3622508 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 3622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 26975349 - 26975301
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatca 431  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  26975349 tattcaaacataaatcattttacattcaactcacttataactaaaatca 26975301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 37639491 - 37639555
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||| ||||||||||| | ||||||||| |||||| ||||||||    
T  37639491 caaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattct 37639555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 42752239 - 42752175
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | |||||||||   |||||||||||||    
T  42752239 caaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattct 42752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 44570730 - 44570682
Alignment:
Q  386 tcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||||||    
T  44570730 tcaaacataaatcactttacattcaactcaattttaagttgaatcaatt 44570682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 451
Target Start/End: Complemental strand, 39634236 - 39634149
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||| || |||  ||| |||||||||||||  | | |||||||||||||||||| | |||||||||   |||||||||||||    
T  39634236 aatcacttttgttttaagttatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattct 39634149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 3750747 - 3750809
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||| ||||||    
T  3750747 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaatt 3750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 421
Target Start/End: Complemental strand, 38510415 - 38510377
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcactttta 421  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  38510415 tattcaaacataaatcactttatattcaactcactttta 38510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 471
Target Start/End: Original strand, 40491726 - 40491772
Alignment:
Q  425 agaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||    
T  40491726 agaatcaattcactcaaaatcaattcttgtcaccgcagaaccaaaca 40491772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 45823267 - 45823329
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||| || |||||||||||||||| |    |||||||||| ||||||||||||    
T  45823267 caaacataaatcacatttcattcaactcacttttgatcgaaatcaattcaatcaaaatcaatt 45823329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 42740454 - 42740515
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||  | |||||||||| ||||||||| | ||||||||| |||||| ||||||    
T  42740454 aaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaatt 42740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 46541660 - 46541725
Alignment:
Q  386 tcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||| ||  | ||||||||||||||| |||| | ||||||||| |||||| ||||||||    
T  46541660 tcaaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattct 46541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 12964659 - 12964723
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||   |||||||||||||||| |||| | ||||||||  |||||| ||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattct 12964723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 15311264 - 15311228
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaac 423  Q
    ||||||||||||||  |||||||||||||||||||||    
T  15311264 caaacataaatcactatacattcaactcacttttaac 15311228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 16079463 - 16079511
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||| || ||||||||||||||| ||| | |||||||||    
T  16079463 caaacataaatcacttttcattcaactcactttaaaccaaaatcaattc 16079511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 36270872 - 36270832
Alignment:
Q  408 tcaactcacttttaactagaatcaattcactcaaaatcaat 448  Q
    ||||||||||||||| || |||||||||| |||||||||||    
T  36270872 tcaactcacttttaattaaaatcaattcattcaaaatcaat 36270832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 37562631 - 37562695
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| || ||| ||||||||    
T  37562631 caaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattct 37562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 471
Target Start/End: Original strand, 40422893 - 40422973
Alignment:
Q  391 cataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||| || |||||||||||| |||||||| || |||||||||| || |||||| || |  ||  ||||||||||||||    
T  40422893 cataaattactttacattcaactaacttttaagtaaaatcaattcattcgaaatcattttttgtcggtgcataaccaaaca 40422973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 41715718 - 41715782
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  ||||||  |||||||||||||  | ||||||||| || ||||||||||||    
T  41715718 caaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 41715782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 47021980 - 47022044
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | || ||||||| ||||||||| | ||||||||| |||||| ||||||||    
T  47021980 caaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattct 47022044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 32560419 - 32560248
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||| |||||| ||| |||||| |||||    
T  32560419 tttggtcattttcataactaaaagcaattttgacacaaaatatccaaacaacatttttcatatgaatcacttttatcataaaagtatccaaacaaaaatc 32560320  T
Q  399 acgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |  || ||| |||||| ||||||   | |||||||| |   |||||||||||||||||| |||||||||||||    
T  32560319 aattttcatccaactcgcttttattcataatcaatt-atgtaaaatcaattctcatcaccgcataaccaaaca 32560248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 43152509 - 43152386
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |  ||||||||| |||   |||  ||| ||||||||||||    
T  43152509 tttggtcatttacacaaccaaaatcaattttgacacaaaatatccaaacaacatttttcatgtaaatcacttctatcgcaaaggtatccaaacataaatc 43152410  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || ||||||||||||||||||    
T  43152409 acttttcattcaactcacttttaa 43152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 3748864 - 3748999
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||| || |||| ||||||| ||||  ||| | ||  ||  |||||||||| |    
T  3748864 tttggtcatttacacacccaaaagtaattttgacaccaaatatccaaacaaaatctttcatacaaataacttcaattgtgaaggtaaccaaacataaacc 3748963  T
Q  399 acgttacattcaactcacttttaactagaatcaatt 434  Q
    || ||||||| |||||||||||||||| ||||||||    
T  3748964 actttacattaaactcacttttaactataatcaatt 3748999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 435
Target Start/End: Original strand, 22811000 - 22811128
Alignment:
Q  308 tttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttaca 406  Q
    |||||||| | |||||||||| | || ||||| || ||||||||||||||| ||| |||||||||| || | ||  ||| |||||||||||||| |||||    
T  22811000 tttacacatctaaaagcaattctgactcaaaacatgcaaacaacatttttcatactaatcacttttgttttgaaggtatccaaacataaatcactttaca 22811099  T
Q  407 ttcaactcacttttaactagaatcaattc 435  Q
    ||||||||||||||||| | |||||||||    
T  22811100 ttcaactcacttttaaccaaaatcaattc 22811128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 421
Target Start/End: Complemental strand, 19204150 - 19204028
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| ||||||||||||||||||| ||||||| ||  |||||||| ||| |||||| ||| |||||| |||||    
T  19204150 tttggtcattttcataactaaaagcaattttgacacaaaatatccaaacaatatttttcatatgaatcacttctatcataaaagtatccaaacaaaaatc 19204051  T
Q  399 acgttacattcaactcactttta 421  Q
    || || ||| |||||||||||||    
T  19204050 acttttcatccaactcactttta 19204028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 2868499 - 2868363
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    |||||| ||||||||||| |||||||||||| |  |||  |||||||||| ||| |||  |  ||||||||||| || | |||| || ||||| ||||||    
T  2868499 tttggtaatttacacacctaaaagcaattttgattcaagctatccaaacaccatctttaatgtaaatcacttttgttcttaaaacatccaaacttaaatc 2868400  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || |||||||||||||||||||||||| |||||||||    
T  2868399 actttacattcaactcacttttaactaaaatcaattc 2868363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 24036559 - 24036689
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttacattcaactcactt 418  Q
    |||||||||||||| | ||| || | ||| || ||| ||  |||||||||||||||||  |  ||||||||||||||||||  |||||||||||||||||    
T  24036559 aaaagcaattttaatataaattacctaaataatattgtttatacaaatcacttttattcaatgatattcaaacataaatcattttacattcaactcactt 24036658  T
Q  419 ttaactagaatcaattcactcaaaatcaatt 449  Q
    || |  | |||||||||  ||||||||||||    
T  24036659 ttcatcaaaatcaattctatcaaaatcaatt 24036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 22482243 - 22482307
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  22482243 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 22482307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 18637379 - 18637443
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||| |||||||  |||  ||||||||||||||  ||||||||||||||||||||||||||||    
T  18637379 caaacacaaatcactgtactctcaactcacttttagttagaatcaattcactcaaaatcaattct 18637443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 433
Target Start/End: Original strand, 7667751 - 7667798
Alignment:
Q  386 tcaaacataaatcacgttacattcaactcacttttaactagaatcaat 433  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||    
T  7667751 tcaaacataaatcactttacattcaactcacttatagctagaatcaat 7667798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 434
Target Start/End: Original strand, 14299418 - 14299469
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||| ||||||| |||| ||||||||||||||| ||||||||||||    
T  14299418 tattcaaacacaaatcactttaccttcaactcacttttatctagaatcaatt 14299469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 19784867 - 19784930
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    |||||||||| ||| |||||||||||||||||||||| | ||||||||||   |||||||||||    
T  19784867 caaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattc 19784930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 33740851 - 33740902
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaac 351  Q
    |||||||||||||||||| ||| |||||||| |||||||||||| |||||||    
T  33740851 tttggtcatttacacacctaaacgcaattttgacacaaaatatctaaacaac 33740902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 43045296 - 43045185
Alignment:
Q  324 caattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatcacgttacattcaactcacttttaa 422  Q
    ||||||| | |||||||||||||||||||| |||| |||||||||||||| | |||||  |||  |||||||||| |  ||||| | ||||||||||||     
T  43045296 caattttgatacaaaatatccaaacaacatatttcatacaaatcacttttgtaataaaggtatctaaacataaattaatttacactaaactcacttttat 43045197  T
Q  423 ctagaatcaatt 434  Q
     || ||||||||    
T  43045196 gtaaaatcaatt 43045185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 2483772 - 2483710
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||  | |||||||||||||||||||||| |||||||||   |||||||||||    
T  2483772 caaacataaatcaattcacattcaactcacttttaactaaaatcaattccaacaaaatcaatt 2483710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 15368565 - 15368630
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||| || | ||||||||| ||| | | |||||||||||||||||||||||||    
T  15368565 tattcaaacataaatcac-ttcccttcaactcaatttcagccagaatcaattcactcaaaatcaatt 15368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 37036844 - 37036733
Alignment:
Q  307 atttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttaca 406  Q
    ||||||| | |||||||||||||| ||||||  ||| |||||||||| |||| || ||||||||| || ||| ||  || |||| ||||||||| |||||    
T  37036844 atttacatatccaaaagcaattttgacacaa--tattcaaacaacatctttcatataaatcacttatactatgaagcatccaaagataaatcactttaca 37036747  T
Q  407 ttcaactcactttt 420  Q
     | |||||||||||    
T  37036746 ctaaactcactttt 37036733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 2694797 - 2694754
Alignment:
Q  408 tcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||| | |||||||||| ||||||||||||||    
T  2694797 tcaactcacttttaaccaaaatcaattcaatcaaaatcaattct 2694754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 28973949 - 28973986
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcactttt 420  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  28973949 tattcaaacataaatcacattatattcaactcactttt 28973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 33953945 - 33953896
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||| |||||||||||||||| || ||||||||| |||||| ||||||||    
T  33953945 ttacgttcaactcacttttaaataaaatcaattctctcaaactcaattct 33953896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 3667908 - 3667972
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||||||||||||||| |  | ||||||||| |||||| ||||||||    
T  3667908 caaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaattct 3667972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 5970005 - 5969957
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||| ||||||||||||||||| || | | |||||||||    
T  5970005 caaacataaatcactttacattcaactcacttatatccaaaatcaattc 5969957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 35760243 - 35760307
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||||||||||||||| |  | ||||||||| |||||| ||||||||    
T  35760243 caaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattct 35760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 42439610 - 42439566
Alignment:
Q  405 cattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||||||||||| || ||||||| |||||| |||||    
T  42439610 cattcaactcacttttaactaaaaccaattcattcaaaaacaatt 42439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 4346950 - 4347086
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||||| | || ||||| |||||||||| ||||||| |||||||||||||| || | ||  ||| ||||||||||||    
T  4346950 tttggtcttttacacatctaaaagcaattctcactcaaaacatccaaacaaaatttttcatacaaatcacttttgttttgaaggtatccaaacataaatc 4347049  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || |||||||||||||||||||||| | |||||||||    
T  4347050 actttacattcaactcacttttaaccaaaatcaattc 4347086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 421
Target Start/End: Complemental strand, 7765433 - 7765311
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| ||||||||||||||||||||||||||| ||  |||||||| ||| |||||| ||| |||||| |||||    
T  7765433 tttggtcattttcataactaaaagcaattttgacacaaaatatccaaacaacatttttcatatgaatcacttctatcataaaagtatccaaacaaaaatc 7765334  T
Q  399 acgttacattcaactcactttta 421  Q
    || || ||| |||||||||||||    
T  7765333 acttttcatccaactcactttta 7765311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 300 - 425
Target Start/End: Complemental strand, 7336029 - 7335903
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    |||||| ||||||||||| |||||||||||| |  |||  |||||||||| ||| |||  |  ||||||||||| || | |||| |||||||||||||||    
T  7336029 tttggtaatttacacacctaaaagcaattttgattcaagctatccaaacaccatctttgatgtaaatcacttttgttgttaaaacattcaaacataaatc 7335930  T
Q  399 acgttacattcaactcacttttaacta 425  Q
    || ||||||||||||||||||||||||    
T  7335929 actttacattcaactcacttttaacta 7335903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 5930736 - 5930872
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||||| | || ||||| || ||||||||||||||| |||||||||||||| || | ||  ||  ||||||||||||    
T  5930736 tttggtcttttacacatctaaaagcaattctcactcaaaacattcaaacaacatttttcatacaaatcacttttgttttgaaggtaaccaaacataaatc 5930835  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || |||||||||| | ||||||||| | |||||||||    
T  5930836 actttacattcaatttacttttaaccaaaatcaattc 5930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 36447818 - 36447705
Alignment:
Q  307 atttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttaca 406  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||| |||  || ||||||||| || ||| ||  |||| |||||||||||| ||||     
T  36447818 atttacatatccaaaagcaattttgacacaaaatatccaaacaacatcttttatataaatcacttctactatgaagcattccaacataaatcactttact 36447719  T
Q  407 ttcaactcactttt 420  Q
     | |||||||||||    
T  36447718 cttaactcactttt 36447705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 20800339 - 20800275
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  20800339 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 20800275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 35569264 - 35569200
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  35569264 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 35569200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 451
Target Start/End: Original strand, 40352411 - 40352518
Alignment:
Q  344 caaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaa 442  Q
    ||||||| |||||||  ||||||||||||| || | |  |||| |||||||||||||| ||||||| |||||||||||||| | ||||||||| | ||||    
T  40352411 caaacaatatttttcacacaaatcacttttgttgtgaggatatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc-cacaaa 40352509  T
Q  443 atcaattct 451  Q
    |||||||||    
T  40352510 atcaattct 40352518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 47978419 - 47978359
Alignment:
Q  391 cataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||| |||||||||||||||||||| | | |||||||||||||||||| ||||||    
T  47978419 cataaatcactttacattcaactcacttttacccaaaatcaattcactcaaaatgaattct 47978359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 28287304 - 28287260
Alignment:
Q  405 cattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  28287304 cattcaactcacttttagctagaatcaattcactcaaagtcaatt 28287260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 47085898 - 47085962
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctc 452  Q
    ||||||||||||  | ||||||||||||||||||| || |||||||||  |||||||||||||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaattctc 47085962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 47981931 - 47981821
Alignment:
Q  313 acacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacgttacattcaa 411  Q
    |||||||||||||||| ||| ||||||||||||||| ||| ||||  || ||||||||| | || | ||  ||| |||||||||||||| ||| ||||||    
T  47981931 acacccaaaagcaattctaatacaaaatatccaaac-acaatttttataaaaatcacttctgttttgaaggtatccaaacataaatcactttaaattcaa 47981833  T
Q  412 ctcacttttaac 423  Q
    |||| |||||||    
T  47981832 ctcaattttaac 47981821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 32365120 - 32365190
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||| |||||||  || || |||||||||||||||  ||||||||||||||||||| |||| ||||||||    
T  32365120 aatcaattttatttaaatatgttcaaacataaatcaatttacattcaactcacttttgactaaaatcaatt 32365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 49178215 - 49178301
Alignment:
Q  363 aaatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||   || ||||||||||||||||||  ||| |||| | ||| ||||||| | |||||||||| ||||||||||||    
T  49178215 aaatcacttttatgtcaagatattcaaacataaatcaatttatattcgagtcatttttaacaaaaatcaattcaatcaaaatcaatt 49178301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 25061267 - 25061352
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||  |||  ||| |||||||||||||  |||  ||||||||||||||||| | ||||||||||  |||||||||||    
T  25061267 aatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattcaaccaaaatcaatt 25061352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 1199891 - 1199955
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||| ||||| |||||| ||||||||    
T  1199891 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattct 1199955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 3515957 - 3516001
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||    
T  3515957 aatcaattcactcaaaaccaattctaatcaccgcataaccaaaca 3516001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 5268310 - 5268362
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  5268310 atattcaaacaaaaatcactttacattcaactcacttttaggcagaatcaatt 5268362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 13344837 - 13344885
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  13344837 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattc 13344885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 31223438 - 31223502
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||| ||||||||    
T  31223438 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 31223502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 42850281 - 42850217
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | |||||||||||| ||| ||||||||    
T  42850281 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattct 42850217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 25230087 - 25230134
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||||| ||||||||| |||||| ||| ||||    
T  25230087 acattcaactcacttttaactaaaatcaattctctcaaactcagttct 25230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 29759715 - 29759762
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||||||  |||||||||||||||||||||| | ||||||||    
T  29759715 caaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 48510972 - 48511035
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||  |||||| |||||||    
T  48510972 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattc 48511035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 4369864 - 4369803
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||||||||||    
T  4369864 caaacataaatcaattcacat-caactcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 5410699 - 5410765
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||  |||||| ||||||||||||||  | |||||||||  ||||| ||||||    
T  5410699 tattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaatt 5410765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 49243048 - 49242982
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||  | |||| ||||||| ||||||| | ||||||||| |||||| ||||||    
T  49243048 tattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaatt 49242982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Complemental strand, 6932158 - 6932113
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaa 447  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||    
T  6932158 ttacattcaactcacttttagtcagaatcaattcattcaaaatcaa 6932113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 10470668 - 10470717
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||||  | ||||||||| |||||| ||||||||    
T  10470668 ttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 10470717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 11561863 - 11561948
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||  |||  ||||||||| ||||||||  | |||||||||||||||||||| | ||| |||||  ||||| ||||||    
T  11561863 aatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaatt 11561948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 12247498 - 12247547
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||| ||||||||||||||| ||||||||||| || ||| ||||||||    
T  12247498 ttacatccaactcacttttaaccagaatcaattctcttaaactcaattct 12247547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 28464984 - 28464939
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaa 432  Q
    ||||||||||||| |||||||||||||| ||||||  |||||||||    
T  28464984 caaacataaatcatgttacattcaactcgcttttagatagaatcaa 28464939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 29438562 - 29438635
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcactttt 373  Q
    ||||||||||| || ||  |||||||| ||| ||||| ||||||||||||| ||||| | ||||||||| ||||    
T  29438562 tttggtcatttgcatacttaaaagcaagtttgacacacaatatccaaacaatattttacatacaaatcattttt 29438635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 34571157 - 34571088
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||||||||||||||  ||||||||||   | |||||||||| |  |||| |||||||||||||    
T  34571157 ttacattcaactcacttttaatcagaatcaattttatgaaaatcaatttttgtcaccgcataaccaaaca 34571088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 50751294 - 50751233
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaat 444  Q
    |||||||||||||||||  ||||||| ||||||||||||    ||||||||||| |||||||    
T  50751294 tattcaaacataaatcattttacatttaactcacttttagtccgaatcaattcattcaaaat 50751233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 3134716 - 3134656
Alignment:
Q  389 aacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||| ||   || |||||||||||||| | ||| |||||||||||||||||||    
T  3134716 aacataaatcactttgttttaaactcacttttaaccataattaattcactcaaaatcaatt 3134656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Original strand, 5167381 - 5167425
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||| |||||||||||| ||||||| ||| |||||||||    
T  5167381 aatcaattcattcaaaatcaattttcatcaccgcagaaccaaaca 5167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 6752845 - 6752789
Alignment:
Q  389 aacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatc 445  Q
    ||||||||| ||  ||||||| ||| ||||||||| |||||||||||| ||||||||    
T  6752845 aacataaattactatacattcgacttacttttaaccagaatcaattcattcaaaatc 6752789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 7765291 - 7765247
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||    
T  7765291 aatcaattctatcaaaatcaattctcgtcaccgcataaccaaaca 7765247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 7826416 - 7826352
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||  | |||||||||||| | ||||||||| |||||||||||||||    
T  7826416 caaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattct 7826352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 13056057 - 13056109
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||||||  | ||| |||||||||||||||| | |||||||||    
T  13056057 tattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattc 13056109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 15477384 - 15477340
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||| |||||||||||||| ||||||| ||||||| |||||    
T  15477384 aatcaatttactcaaaatcaattttcatcaccgcataacaaaaca 15477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 27801714 - 27801650
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  ||||||  |||||||||||||  | ||||||||| || ||||||||||||    
T  27801714 caaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 27801650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 45710109 - 45710176
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||| |||  | |||| ||||||||||||||  | |||||||||||||||| ||||||||    
T  45710109 tattcaaacataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattct 45710176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 9e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 449
Target Start/End: Complemental strand, 23360077 - 23359927
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||||| | |  ||||| |||||||||||||||||| ||| |||||||||| || | ||  ||| ||||||||||||    
T  23360077 tttggtcttttacacatctaaaagcaattctgattcaaaacatccaaacaacatttttcatactaatcacttttgttttgaaggtatccaaacataaatc 23359978  T
Q  399 acgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    || |||||||||||||||||||||| | |||||||||   |||||||||||    
T  23359977 actttacattcaactcacttttaaccaaaatcaattctaccaaaatcaatt 23359927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 12110847 - 12110970
Alignment:
Q  311 acacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttacattca 410  Q
    ||||| |||||||||||| |||  |||||||| |||||| || ||||| || ||||||||| | || | || ||| |||||||||||||| ||| |||||    
T  12110847 acacatccaaaagcaattctaatgcaaaatattcaaacaccagttttcataaaaatcacttatgttttgaagtatccaaacataaatcactttatattca 12110946  T
Q  411 actcacttttaactagaatcaatt 434  Q
    ||||||||||||| | ||||||||    
T  12110947 actcacttttaaccaaaatcaatt 12110970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 37543866 - 37543944
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat 378  Q
    |||||||||||||||| | |||| |||||||||||||||| || ||| ||||||||||| |||||||||| ||||||||    
T  37543866 tttggtcatttacacatctaaaaacaattttaacacaaaaaattcaatcaacatttttcatacaaatcacgtttattat 37543944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 434
Target Start/End: Original strand, 1763192 - 1763316
Alignment:
Q  311 acacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacgttacattc 409  Q
    |||||||||||||||||| ||| |||||||||||||||| || ||||| || ||||||||| | || | ||  |||  ||||||||||||| ||| ||||    
T  1763192 acacacccaaaagcaattctaatacaaaatatccaaacatcagttttcataaaaatcacttctgttttgaaggtatctaaacataaatcactttaaattc 1763291  T
Q  410 aactcacttttaactagaatcaatt 434  Q
    |||||| ||||||| | ||||||||    
T  1763292 aactcaattttaaccaaaatcaatt 1763316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 23377465 - 23377589
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| |||||||| | |||||||||| | |  ||||| |||||||||||||||||  ||| |||||||||| || | ||  ||| ||||||||||||    
T  23377465 tttggtcttttacacatctaaaagcaattctgattcaaaacatccaaacaacattttttatactaatcacttttgttttgaaggtatccaaacataaatc 23377564  T
Q  399 acgttacattcaactcacttttaac 423  Q
    |  ||||||||||||||||||||||    
T  23377565 aacttacattcaactcacttttaac 23377589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 431
Target Start/End: Complemental strand, 11005836 - 11005706
Alignment:
Q  303 ggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacattt-ttcctacaaatcacttttattataaaa-tattcaaacataaatcac 400  Q
    |||||||| ||| | ||||||| |||||| |||||||||||||||||| |    |||  |||||||||||||||| ||||| ||| |||||||||||||     
T  11005836 ggtcatttgcacgctcaaaagcgattttaccacaaaatatccaaacaatacacattcacacaaatcacttttattgtaaaaatatccaaacataaatcat 11005737  T
Q  401 gttacattcaactcacttttaactagaatca 431  Q
     |||||||||| ||||| ||||||| |||||    
T  11005736 tttacattcaagtcactattaactaaaatca 11005706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 10918652 - 10918715
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    |||||||||||||| |||||||||||||||||||| | | |||||||||| ||||||| |||||    
T  10918652 caaacataaatcactttacattcaactcacttttatccaaaatcaattcagtcaaaattaattc 10918715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 14532092 - 14531978
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    |||||||||||||||| |||||| ||||||| |||| ||||| ||||||||         ||||||||||||||||| ||||  ||| |||||| |||||    
T  14532092 tttggtcatttacacaaccaaaaacaattttgacacgaaatacccaaacaa---------tacaaatcacttttattgtaaaggtatccaaacacaaatc 14532002  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || ||||||||||||||||||    
T  14532001 acttttcattcaactcacttttaa 14531978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 31224706 - 31224793
Alignment:
Q  364 aatcacttttattataaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||| || || |||| |||||||||||||  | |||| ||||||||||||||||| |||||||||  ||||| ||||||||    
T  31224706 aatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattct 31224793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 5055130 - 5055266
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcactttt--attataaaatattcaaacataaat 397  Q
    ||||||||||| ||| | ||||||||||||| |||||||||||||||||| ||| || | ||||||||| ||||  |||  ||  |||||||||| |||     
T  5055130 tttggtcatttccacgctcaaaagcaattttgacacaaaatatccaaacatcatcttacatacaaatcaattttgcatt-gaaggtattcaaacacaaac 5055228  T
Q  398 cacgttacattcaactcacttttaactagaatcaattc 435  Q
    ||| |||  || |||||||||||||| | |||||||||    
T  5055229 cactttatgttaaactcacttttaaccaaaatcaattc 5055266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 1945098 - 1945034
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  1945098 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 1945034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 29968981 - 29968937
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  29968981 ttacattcaactcacttttaactaaaatcaattcattcaaaatca 29968937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 42770541 - 42770420
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| ||||||  |||||||||||||| | || ||  ||||||||||||  |||| |||| |||||||| |||    
T  42770541 tttggtcattttcataactaaaagcaattttgacacaa--tatccaaacaacatctctcataagaatcacttttatcttaaagatatccaaacatagatc 42770444  T
Q  399 acgttacattcaactcacttttaa 422  Q
    |  || ||||||||||||||||||    
T  42770443 aattttcattcaactcacttttaa 42770420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 3853949 - 3854012
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattc 450  Q
    |||||||||||||  |||||||||||||||||||||  | |||||||||  |||||||||||||    
T  3853949 caaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattc 3854012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 434
Target Start/End: Complemental strand, 4119420 - 4119369
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||||||||||| |||||||  ||||||||||| ||||||||||||    
T  4119420 tattcaaacataaatcactttacattagactcacttttagctagaatcaatt 4119369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 4894145 - 4894090
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaa 443  Q
    ||||||||||||| |||| ||||||| | ||||| |||||||||||||||||||||    
T  4894145 aaacataaatcactttaccttcaacttaattttagctagaatcaattcactcaaaa 4894090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 14821228 - 14821275
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  14821228 acattaaactcacttttaactaaaatcaattcactcaaactcaattct 14821275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 413
Target Start/End: Original strand, 29844146 - 29844252
Alignment:
Q  308 tttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacgttaca 406  Q
    |||||||| | ||||| |||| | || ||||| |||||||||||||||||| |||||||||||||| || | ||  ||  |||||||||||||| ||||     
T  29844146 tttacacatctaaaagtaattatgactcaaaacatccaaacaacatttttcatacaaatcacttttgttttgaaggtaaccaaacataaatcactttacc 29844245  T
Q  407 ttcaact 413  Q
    |||||||    
T  29844246 ttcaact 29844252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 26806400 - 26806266
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| ||||||  ||||||||||| || |||| ||  |||||||| |||  ||||  ||| ||||||||||||    
T  26806400 tttggtcattttcataactaaaagcaattttgacacaa--tatccaaacaatatctttcatatgaatcacttctatcttaaaggtatccaaacataaatc 26806303  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || || || |||||||||||||||  | |||||||||    
T  26806302 acttttcactcaactcacttttaatcaaaatcaattc 26806266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 9988560 - 9988496
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | ||||||||| |||||| ||||||||    
T  9988560 caaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattct 9988496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 25747940 - 25747877
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |||||||||||||||||||||  | ||||||||| |||||| ||||||||    
T  25747940 caaacataaatcaa-ttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 25747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 30007612 - 30007548
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||| ||||| |||||| ||||||||    
T  30007612 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattct 30007548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 471
Target Start/End: Original strand, 30503303 - 30503387
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||| ||||||  |||| ||||||| |||||||   ||||||||||||||||||||| ||| |  ||| ||||||||||||||    
T  30503303 caaacaaaaatcagtttaccttcaactaacttttagtcagaatcaattcactcaaaatcgattattgtcattgcataaccaaaca 30503387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 5916284 - 5916237
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||| | ||||||||| |||||||| ||||||    
T  5916284 acattcaactcacttttaaccaaaatcaattctctcaaaattaattct 5916237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 36312342 - 36312389
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||| | ||||||||| |||||||| ||||||    
T  36312342 acattcaactcacttttaaccaaaatcaattctctcaaaattaattct 36312389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 38600506 - 38600447
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaa 442  Q
    |||||||||||||||||  ||||||  |||||||||||||| | ||||||||| ||||||    
T  38600506 tattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaa 38600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 7632583 - 7632521
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||| | ||||| |||| ||||| ||||||||||  ||||| |||||||||||||||||||    
T  7632583 caaacacatatcactttaccttcaattcacttttaatcagaataaattcactcaaaatcaatt 7632521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 434
Target Start/End: Complemental strand, 37402228 - 37402198
Alignment:
Q  404 acattcaactcacttttaactagaatcaatt 434  Q
    |||||||||||||||||||||||||||||||    
T  37402228 acattcaactcacttttaactagaatcaatt 37402198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 3476417 - 3476356
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||| ||||| | || |||| |||||||||| | |||||||||||||| ||||||||||    
T  3476417 aaacatatatcacttcactttcagctcacttttatccagaatcaattcacttaaaatcaatt 3476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 8170376 - 8170425
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||||  | ||||||||| |||||| ||||||||    
T  8170376 ttacattcaactcacttttaatcaaaatcaattctctcaaactcaattct 8170425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 420
Target Start/End: Complemental strand, 15220850 - 15220817
Alignment:
Q  387 caaacataaatcacgttacattcaactcactttt 420  Q
    |||||||||||||| |||||||||||||||||||    
T  15220850 caaacataaatcactttacattcaactcactttt 15220817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 32827620 - 32827661
Alignment:
Q  408 tcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||| ||||| ||| |||||||||||||||||||||||    
T  32827620 tcaactcatttttatctaaaatcaattcactcaaaatcaatt 32827661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 2213555 - 2213619
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||||||||||||||| |  | ||||||||| |||||| ||||||||    
T  2213555 caaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattct 2213619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 7295407 - 7295343
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |||| |  |||||| ||||||| ||||||||||| |||||| ||||||||    
T  7295407 caaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattct 7295343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 34433365 - 34433301
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||  | |||||||||  ||||| ||||||||    
T  34433365 caaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattct 34433301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 471
Target Start/End: Complemental strand, 37745833 - 37745789
Alignment:
Q  427 aatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||||    
T  37745833 aatcaattcactcaaaatcaattattatcaccgcaaaaccaaaca 37745789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 41031508 - 41031465
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatca 431  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||    
T  41031508 caaacataaatcac-ttacatttaactcactattaactagaatca 41031465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 446
Target Start/End: Original strand, 20676987 - 20677133
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatca 399  Q
    |||||| ||||||| | |||||||||||||| |||||||||||||||||||||  |||  || ||||||||| || ||| || ||| |||||||||||||    
T  20676987 tttggtaatttacatatccaaaagcaattttgacacaaaatatccaaacaacaacttttgtataaatcacttctactatgaagtatccaaacataaatca 20677086  T
Q  400 cgttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    | ||||| | || |||||||| |  | |||||||||| |||||||||    
T  20677087 ctttacactaaattcacttttgatcaaaatcaattcaatcaaaatca 20677133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 319 - 471
Target Start/End: Original strand, 22699698 - 22699851
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttacattcaactcact 417  Q
    |||||||||| | || ||||| |||||||||| ||||||| |||||||||||||| || | ||  ||| |||||||||||||| |||||||||||| |||    
T  22699698 aaaagcaattatgactcaaaacatccaaacaaaatttttcatacaaatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttact 22699797  T
Q  418 tttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||| | |||||||||   ||||||||||| |  |||| ||| |||||||||    
T  22699798 tttaaccaaaatcaattctaccaaaatcaatttttttcaccgcacaaccaaaca 22699851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 422
Target Start/End: Complemental strand, 14597773 - 14597650
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| |||||||||||||||||||||| | || ||  |||||||| |||  |||| |||| ||||||||||||    
T  14597773 tttggtcattttcataactaaaagcaattttgacacaaaatatccaaacaacatctctcataagaatcacttctatcttaaagatatccaaacataaatc 14597674  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || ||||||||||||||||||    
T  14597673 acttttcattcaactcacttttaa 14597650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 22980832 - 22980701
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttacattcaactcact 417  Q
    |||||||||| | || ||||| |||||||||| ||||||| |||||||||||||| || | ||  ||| |||||||||||||| |||||||||||| |||    
T  22980832 aaaagcaattatgactcaaaacatccaaacaaaatttttcatacaaatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttact 22980733  T
Q  418 tttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||| | |||||||||   |||||||||||    
T  22980732 tttaaccaaaatcaattctaccaaaatcaatt 22980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 22994419 - 22994288
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatcacgttacattcaactcact 417  Q
    |||||||||| | || ||||| |||||||||| ||||||| |||||||||||||| || | ||  ||| |||||||||||||| |||||||||||| |||    
T  22994419 aaaagcaattatgactcaaaacatccaaacaaaatttttcatacaaatcacttttgttttgaaggtatccaaacataaatcactttacattcaacttact 22994320  T
Q  418 tttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||| | |||||||||   |||||||||||    
T  22994319 tttaaccaaaatcaattctaccaaaatcaatt 22994288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 46957968 - 46958110
Alignment:
Q  308 tttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatcacgttaca 406  Q
    |||||||| | |||||||||| | |||||||| |||||||||||||||||| |||||| ||||| | || | ||  ||  ||||||||||| || ||||     
T  46957968 tttacacatctaaaagcaattctgacacaaaacatccaaacaacatttttcatacaaagcacttctgttttgaaggtaaccaaacataaattactttacg 46958067  T
Q  407 ttcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||||||| | |||||||||  ||||||||||||    
T  46958068 ttcaactcacttttaaccaaaatcaattctatcaaaatcaatt 46958110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 434
Target Start/End: Original strand, 20231919 - 20232055
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    ||||||||| || | | |||||||||||||| |||||||||||| ||||||||| |||| |||||||||||| |||| |||| ||||  ||||||||| |    
T  20231919 tttggtcatctatataaccaaaagcaattttgacacaaaatatctaaacaacatatttcatacaaatcacttctattgtaaatatatctaaacataaaac 20232018  T
Q  399 acgttacattc-aactcacttttaactagaatcaatt 434  Q
    || || ||||| |||| ||||||||| | ||||||||    
T  20232019 acttttcattcaaactaacttttaaccaaaatcaatt 20232055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 471
Target Start/End: Original strand, 36150621 - 36150713
Alignment:
Q  379 aaaatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  | ||||||||   ||||||||||||||| |||| ||| |||||||||    
T  36150621 aaaatatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaattctcgtcaccgcacaaccaaaca 36150713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 38306264 - 38306201
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctaca 363  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  38306264 tttggtcatttacatacccaaaagtaattttaacataaaatatccaaacaacatttttcataca 38306201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 413
Target Start/End: Complemental strand, 1589743 - 1589629
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    |||||||||||||| ||| ||||||||||| |||| ||||||||||||||| | ||||| ||||||||| ||||||  ||||   || ||||||| ||||    
T  1589743 tttggtcatttacaaaccaaaaagcaatttcaacataaaatatccaaacaatacttttcatacaaatcaattttatattaaaggcatccaaacatgaatc 1589644  T
Q  399 acgttacattcaact 413  Q
    || ||||||||||||    
T  1589643 actttacattcaact 1589629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 28947898 - 28947762
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaa-tattcaaacataaatc 398  Q
    ||||||| | |||||| | |||||||||| | |||||||| || ||||||| ||||||| |||||| ||||| |||| | ||  ||  ||||||||||||    
T  28947898 tttggtcttctacacatctaaaagcaattctgacacaaaacattcaaacaatatttttcatacaaaacacttctattttgaaggtaaccaaacataaatc 28947799  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || |||| ||||||||||||||||| | |||||||||    
T  28947798 actttacgttcaactcacttttaaccaaaatcaattc 28947762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 33843802 - 33843869
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||| |||||||||||||| |||||| ||||||||||||| | |||||||||||| ||||||||||||    
T  33843802 atatccaaacataaatcactttacatccaactcacttttagccagaatcaattcaatcaaaatcaatt 33843869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 40286226 - 40286297
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcactt 371  Q
    |||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||| |  |||||||||    
T  40286226 tttggtcatttacacaaccaaaatcaattttgacacaaaatagccaaacaacatttttcatgtaaatcactt 40286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 42944958 - 42944895
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||  | |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  42944958 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattct 42944895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 451
Target Start/End: Original strand, 33574198 - 33574267
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||||||||  | |||||||||||||||||||| | ||| ||||| |||||| ||||||||    
T  33574198 atattcaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattct 33574267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 16566330 - 16566394
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  16566330 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 16566394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 54488626 - 54488694
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||  | |||||||||||||||||||| | |||||||||   |||||||||||||    
T  54488626 tattcaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattct 54488694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 32238103 - 32238056
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||    
T  32238103 acattcaactcacttttaaccaaaatcaattcactcaaactcaattct 32238056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 53532002 - 53532049
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  53532002 caaacataaaccacgttacatccaactcacttttaactaaaatcaatt 53532049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 55638815 - 55638752
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||  ||||||| |||||||||||||| | ||||||||| |||||| ||||||||    
T  55638815 aaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattct 55638752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 48045741 - 48045679
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||| |||  ||||||||| ||||| | |||||||||| ||||||||||||||    
T  48045741 caaacataaatcactttatcttcaactcagttttagccagaatcaatttactcaaaatcaatt 48045679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 54153066 - 54153131
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||| |||  | |||||||||||||||||||| | |||||||||||||||| ||||||    
T  54153066 tattcaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaatt 54153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 27045554 - 27045611
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaat 444  Q
    ||||||||||| ||  ||||||||||| ||||||||||| |||||||||| |||||||    
T  27045554 caaacataaataactctacattcaacttacttttaactaaaatcaattcattcaaaat 27045611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 37500250 - 37500205
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||    
T  37500250 acattcaactcaattttaactaaaatcaattcattcaaaatcaatt 37500205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 1589960 - 1589908
Alignment:
Q  170 agcccactaattttttggttttataaaataataatatgaattttagttaccaa 222  Q
    |||||| | ||||||| |||||||||| |||||| ||||||||||||||||||    
T  1589960 agcccattcatttttttgttttataaattaataaaatgaattttagttaccaa 1589908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 46830130 - 46830066
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | |||||||||||| ||| ||||||||    
T  46830130 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattct 46830066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 48550488 - 48550424
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||| | |||||||||  ||||||||||||||    
T  48550488 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattct 48550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 51922965 - 51923029
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | | |||||||||||||||||| | ||||||||| |||||| ||||||||    
T  51922965 caaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattct 51923029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 446
Target Start/End: Original strand, 2206260 - 2206303
Alignment:
Q  403 tacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||||||||||||| || |||||||||| |||||||||    
T  2206260 tacattcaactcacttttaaataaaatcaattcattcaaaatca 2206303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 26651908 - 26651845
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| | ||||||    
T  26651908 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattct 26651845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 4954112 - 4954050
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||  | ||||  |||||||||||||| | ||||||||| |||||||||||||    
T  4954112 caaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 13167550 - 13167612
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||| ||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||    
T  13167550 caaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 13167612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 26617315 - 26617281
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattca 436  Q
    |||||||||||||||||||||||| ||||||||||    
T  26617315 ttacattcaactcacttttaactaaaatcaattca 26617281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 32634099 - 32634137
Alignment:
Q  384 attcaaacataaatcacgttacattcaactcacttttaa 422  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  32634099 attcaaacataaatcacattacattcaagtcacttttaa 32634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 38306469 - 38306435
Alignment:
Q  188 ttttataaaataataatatgaattttagttaccaa 222  Q
    ||||||||||||||||||||||||| |||||||||    
T  38306469 ttttataaaataataatatgaatttaagttaccaa 38306435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 39438886 - 39438948
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||  || | ||||||||||||||||||| || ||| |||||| ||||||||||||    
T  39438886 caaacataaacaacttcacattcaactcacttttaagtaaaattaattcattcaaaatcaatt 39438948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 41751265 - 41751199
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||| |||||| |||  || |||||||||||||  | ||| |||||||||||||||||||    
T  41751265 tattcaaacattaatcactttatcttgaactcacttttaaacaaaataaattcactcaaaatcaatt 41751199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 41866179 - 41866241
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||  | |||| ||||||||||||||||| | ||||||| |||||| ||||||    
T  41866179 caaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaatt 41866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 50358035 - 50357973
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||| | ||| || ||||||||||||||||||||| |||||| ||| | ||||||||||    
T  50358035 caaacatagaccactttgcattcaactcacttttaactaaaatcaactcatttaaaatcaatt 50357973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 52063039 - 52062977
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||| ||||||  |||| || |||||||||||||||| |||||||||| |||| |||||||    
T  52063039 caaacagaaatcattttaccttaaactcacttttaactaaaatcaattcaatcaagatcaatt 52062977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 419
Target Start/End: Complemental strand, 17898122 - 17898085
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttt 419  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  17898122 atatccaaacataaatcactttacattcaactcacttt 17898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 46508028 - 46507979
Alignment:
Q  385 ttcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    |||||||||||||||| ||| |||| |||||||||||  |||||||||||    
T  46508028 ttcaaacataaatcactttatattccactcacttttatttagaatcaatt 46507979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 19599556 - 19599493
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  ||||||||||||||||||||   | ||||||||| |||||| ||||||||    
T  19599556 caaacataaatcaa-ttacattcaactcacttttattcaaaatcaattctctcaaactcaattct 19599493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 28658051 - 28658103
Alignment:
Q  319 aaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcactt 371  Q
    |||| ||||| | ||| ||||||||||||||| ||||||| ||||||||||||    
T  28658051 aaaaacaattcttacaaaaaatatccaaacaatatttttcatacaaatcactt 28658103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 28752560 - 28752604
Alignment:
Q  408 tcaactcacttttaactagaatcaattcactcaaaatcaattctc 452  Q
    |||||||||||||||| | ||||||||||  ||||||||||||||    
T  28752560 tcaactcacttttaaccaaaatcaattcagacaaaatcaattctc 28752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 29149368 - 29149304
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | ||||||||||||||||| |  | ||||||||| |||||| ||||||||    
T  29149368 caaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattct 29149304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 38306036 - 38306100
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |  ||||||||||||||||||| | |||||||||   |||||||||||||    
T  38306036 caaacataaatcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattct 38306100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 39187759 - 39187823
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||||||| | ||||||||| | ||||||||| |||||| ||||||||    
T  39187759 caaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaattct 39187823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 39636810 - 39636874
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  | |||| ||||||||||||||  | ||||||||| |||||| ||||||||    
T  39636810 caaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattct 39636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 39672982 - 39673042
Alignment:
Q  389 aacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||  || |||||||| | ||||||||| ||||| |||| ||||||||||||    
T  39672982 aacataaatcactctatattcaactaagttttaactaaaatcagttcaatcaaaatcaatt 39673042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 43772184 - 43772120
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||   | |||| ||||||||||||||| | ||||||||| |||||| ||||||||    
T  43772184 caaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 43772120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 45471083 - 45471135
Alignment:
Q  382 atattcaaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||| ||| ||||||||| ||||||| || |||||||||| |||||||||||    
T  45471083 atatttaaatataaatcactttacatttaagtcacttttaattagaatcaatt 45471135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 48550242 - 48550306
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  ||||||  |||||||||||||  | ||||||||| || ||||||||||||    
T  48550242 caaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattct 48550306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 49519755 - 49519819
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||| |  | |||| ||||||||||||||| | ||||||||| |||||| ||||||||    
T  49519755 caaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 49519819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 54487281 - 54487197
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    |||||||||||||  ||||||||||||||||||| |    |||||||||  ||||| |||||| | ||||  |||||||||||||    
T  54487281 caaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaatttttatcatcgcataaccaaaca 54487197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 199518 - 199382
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattat-aaaatattcaaacataaatc 398  Q
    ||||||| |||||||  | |||||||||| | |||||||| |||||||||||||||||| |||||| ||||| |||| | ||  ||  ||||||||||||    
T  199518 tttggtcttttacacttctaaaagcaattctgacacaaaacatccaaacaacatttttcatacaaagcacttatattttgaaggtaaccaaacataaatc 199419  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || |||| ||||||||||||||||| | |||||||||    
T  199418 actttacgttcaactcacttttaaccaaaatcaattc 199382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 219605 - 219728
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaa-atattcaaacataaatc 398  Q
    ||||||||||| || | | |||||||||||| |||||||||||||||||||||| | || ||  |||||||| |||  |||| |||| ||||||||||||    
T  219605 tttggtcattttcataactaaaagcaattttgacacaaaatatccaaacaacatctctcataagaatcacttctatcttaaagatatccaaacataaatc 219704  T
Q  399 acgttacattcaactcacttttaa 422  Q
    || || ||||||||||||||||||    
T  219705 acttttcattcaactcacttttaa 219728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 15394 - 15271
Alignment:
Q  311 acacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaatcacgttacattca 410  Q
    ||||| |||||||||||| |||  |||||||| |||||| || ||||| || ||||||||| | || | || ||| |||||||||||||| ||| |||||    
T  15394 acacatccaaaagcaattctaatgcaaaatattcaaacaccagttttcataaaaatcacttatgttttgaagtatccaaacataaatcactttatattca 15295  T
Q  411 actcacttttaactagaatcaatt 434  Q
    ||||||||||||| | ||||||||    
T  15294 actcacttttaaccaaaatcaatt 15271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 3605900 - 3605764
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattata-aaatattcaaacataaatc 398  Q
    |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||||||| |  ||||||||| |||  || |  | | ||||||||||||    
T  3605900 tttggtcatttacacaaccaaaatcaattttgacacaaaatagtcaaacaacatttttcatgtaaatcacttctatggtagaggtgtccaaacataaatc 3605801  T
Q  399 acgttacattcaactcacttttaactagaatcaattc 435  Q
    || || || |||||||||||||||  | |||||||||    
T  3605800 acttttcactcaactcacttttaatcaaaatcaattc 3605764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 16442411 - 16442346
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattctc 452  Q
    |||||||||||||  | ||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  16442411 caaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattctc 16442346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 882782 - 882842
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaa 447  Q
    |||||||||||||  |||| ||||||||| |||||||||||||||||||||||||| ||||    
T  882782 caaacataaatcattttaccttcaactcaattttaactagaatcaattcactcaaactcaa 882842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 28020594 - 28020523
Alignment:
Q  304 gtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttatt 376  Q
    |||||||| | ||||||||||||||| | |  ||||||||||||||||||||||| |||||||||||| ||||    
T  28020594 gtcatttataaacccaaaagcaatttga-cttaaaatatccaaacaacatttttcgtacaaatcacttatatt 28020523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 34911033 - 34911100
Alignment:
Q  381 aatattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||| |||||||||||||| |||| |||||||||||||||    ||||||||||||||||||||||||    
T  34911033 aatatccaaacataaatcac-ttaccttcaactcacttttagtcggaatcaattcactcaaaatcaatt 34911100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 449
Target Start/End: Complemental strand, 2234191 - 2234144
Alignment:
Q  402 ttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||    
T  2234191 ttacattcaactcacttttaagtaaaatcaattcattcaaaatcaatt 2234144  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 6208107 - 6208060
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||    
T  6208107 acattcaactcacttttaatcaaaatcaattcactcaaaatcaattct 6208060  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 17830058 - 17829995
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    ||||||||||||  | |||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 17829995  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 34026454 - 34026390
Alignment:
Q  407 ttcaactcacttttaactagaatcaattcactcaaaatcaattctcatcactgcataaccaaaca 471  Q
    ||||||||||||||| | ||||||||||||||||||||  |||||  |||| ||| |||||||||    
T  34026454 ttcaactcacttttagccagaatcaattcactcaaaatatattcttgtcacagcaaaaccaaaca 34026390  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 3816425 - 3816374
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcact 438  Q
    |||||||||| | | |||||||||||||||||||| | ||||||||||||||    
T  3816425 caaacataaagcgcattacattcaactcacttttatccagaatcaattcact 3816374  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 28466973 - 28466914
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||| |||  ||| ||||||||| ||||| | ||||||||||||||||||||||    
T  28466973 caaacataaaccactataccttcaactcaattttagccagaatcaattcactcaaaatca 28466914  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 34620982 - 34621041
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||||||| |||| ||||||||| || || | |||||| |||||||||||||||    
T  34620982 caaacataaatcactttaccttcaactcaattctagccagaatccattcactcaaaatca 34621041  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 34736760 - 34736819
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||| |||  ||| ||||||||| ||||| | ||||||||||||||||||||||    
T  34736760 caaacataaaccactataccttcaactcaattttagccagaatcaattcactcaaaatca 34736819  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 34748419 - 34748478
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatca 446  Q
    |||||||||||||| |||| ||||||||| || || | |||||| |||||||||||||||    
T  34748419 caaacataaatcactttaccttcaactcaattctagccagaatccattcactcaaaatca 34748478  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 16122066 - 16122000
Alignment:
Q  383 tattcaaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||| ||||||  ||||| |||| ||||||||||| | |||||||||  ||||||||||||    
T  16122066 tattcaaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaatt 16122000  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 434
Target Start/End: Original strand, 25208723 - 25208769
Alignment:
Q  388 aaacataaatcacgttacattcaactcacttttaactagaatcaatt 434  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||    
T  25208723 aaacataaatcattttacattcaactcacttttaattaaaatcaatt 25208769  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 16548179 - 16548227
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattc 435  Q
    |||||||||||||  | |||||||||||||||||||| | |||||||||    
T  16548179 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 16548227  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 21254939 - 21254876
Alignment:
Q  387 caaacataaatcacgttacattcaactcacttttaactagaatcaattcactcaaaatcaattct 451  Q
    |||||||||||||  |||||||||||||||||||||  | | ||||||| |||||| ||||||||    
T  21254939 caaacataaatcaa-ttacattcaactcacttttaatcaaattcaattctctcaaactcaattct 21254876  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 5874 - 5829
Alignment:
Q  404 acattcaactcacttttaactagaatcaattcactcaaaatcaatt 449  Q
    |||||||||||||||||||| | ||||||||| |||||| ||||||    
T  5874 acattcaactcacttttaaccaaaatcaattctctcaaactcaatt 5829  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 6914 - 7010
Alignment:
Q  300 tttggtcatttacacacccaaaagcaattttaacacaaaatatccaaacaacatttttcctacaaatcacttttattataaaatattcaaacataaat 397  Q
    ||||||||||||||||  ||||| ||||||| ||| ||| |||  ||||||||| |||  |||||||||||||| || | || ||| |||||||||||    
T  6914 tttggtcatttacacattcaaaatcaattttgacataaa-tatttaaacaacatattttatacaaatcacttttgttttgaagtatccaaacataaat 7010  T

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