View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18168_low_1 (Length: 1228)
Name: NF18168_low_1
Description: NF18168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18168_low_1 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 733; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 733; E-Value: 0
Query Start/End: Original strand, 14 - 895
Target Start/End: Original strand, 17898518 - 17899405
Alignment:
| Q |
14 |
aatatcataaaaatgagcttttgaagctctttaggaggtgtcagaattcaaagagaaactaaaatttgctaaccaatt--------tattgccttctcgt |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
17898518 |
aatatcataaaaatgagcttttgaagctctttaggaggtgtcaaaattcaaagagaaactaaaatttgctaaccaatcagcacatctattgcctttgcgt |
17898617 |
T |
 |
| Q |
106 |
caactgtgaataacatgtatgctagctttgctgaaaaagctgtggaatatgtcgaatcaatgaaggggtggttccgttgatcttgcaatgtttggtaacc |
205 |
Q |
| |
|
||| |||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
17898618 |
caagtgtgaataacatgtatgccagtttcgctgaaaaagctgtggaatatgtcgaatcaatgaaggg-tggttccattgatcttgcaatgtttggtaacc |
17898716 |
T |
 |
| Q |
206 |
atgtcaatacgcactttcgagtctttttcaataattaggtgagatagaccttcttttcaagccatatcaagtctcagatatggaccctgcatctttgcat |
305 |
Q |
| |
|
||||||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17898717 |
atgtcaataaacactttcgagtcattttcaacaattagatgagatagaccttcttttcaagccatatcaagtctcagatatggaccctgcatctttgcat |
17898816 |
T |
 |
| Q |
306 |
gaaattcatcacaagtttcaattttttcgattaaatcctttaagccatagagaccatatgaatggcgaagaagccttccacatcctgcgatctttctatt |
405 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17898817 |
gaaatgcatcacaagtttcaattttttcgattaaatcctttaagccatagagaccatatgaatgacgaagaagccttccacatcctgcaatctttctatt |
17898916 |
T |
 |
| Q |
406 |
gcttttagaatctctgtcacaattaagcttcacccaattatcatttggtctcttccaaccaataaacatagtttccttatgttggggattgactaacaaa |
505 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17898917 |
gcttttacaatctctgtcacgattaagcttcacccaattatcatttggtctctcccaaccgataaacatagtttccttatgttggggattgactaacaaa |
17899016 |
T |
 |
| Q |
506 |
tgattttgagaactttcttctataacactaatgaaattttggataacaaaggttgggttagttggtctgtagaatccatctttgaaaattgatttgtttc |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17899017 |
tgattttgagaactttcttctataacactaatgaaattttggataacaaaggttgggttagttggtctttagaatccatctttgaaaattgatttgtttc |
17899116 |
T |
 |
| Q |
606 |
tacaagtccacaaatgccaacaagtagtcatgaatgttgttttccaactattatcaacaactccattccaccttttgttgaggtttttgaaagcccaaat |
705 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17899117 |
tacaagtccacaaatgccaacaagtagtcatgaatgttgttttccaactagtatcaacaactccattccaccttttgttgaggtttttgaaagcccaaat |
17899216 |
T |
 |
| Q |
706 |
tctgcaatcagtaaaagaaaaaagttagtgacccaatctggaggcacaagtatattccatagctgatatgcatgcgtacacgtcacggagcacgtgcaga |
805 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
17899217 |
tctgcaatcagcaaaagaaaaaagttagtgacccaatctggaggcgcaagtatattccatacctgatatacatgcgtaca-gtcacagagcacgtgcaga |
17899315 |
T |
 |
| Q |
806 |
acatactcattttcattcctacaacatggacaagtgggtgatatacccaccgccatctactttggcggcagttagtaagaatacatccat |
895 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17899316 |
acatactcattttcattcctacaacatggacaagtgggtgatatacccaccgccatctactttggcggcagttagtaagaatacatccat |
17899405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 893 - 1206
Target Start/End: Original strand, 17901387 - 17901700
Alignment:
| Q |
893 |
catgagccactaaccacttgaaaatttgaatacgatgtgttccccttcatttccattgtacttgtcaatccccctccgcaaaaacatgatttgaaacaaa |
992 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
17901387 |
catgagccattaaccacgtgaaaatttgaacacgatgcattccccttcatttccatagtacttgtccatccccctccgcaataacatgatttgaaacaag |
17901486 |
T |
 |
| Q |
993 |
taaatcgtaagcactcttaacggaaaattgatgagtattaatgccaccccacccaatagtgtcaagcccatcaacctccataagggttgggattgctatg |
1092 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17901487 |
taaatcgtaagcactcttgacggagaattgatgagtactaatgccaccccacccaatggtgtcaagcccatcaacctccataagggttgggattgctatg |
17901586 |
T |
 |
| Q |
1093 |
attttattagcaatattaacatgtagattcgtaaacaataaattgttgtctcaattaccagaagcattagttatatccttaacagtaagagtgattttca |
1192 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
17901587 |
attttattagcaatattaacgtgtagattcgtaaacaataaattgttgtctcaattaccagaagcattagttacatccttaacagtaagagtggttttca |
17901686 |
T |
 |
| Q |
1193 |
aaaaagtttgagta |
1206 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17901687 |
aaaaagtttgagta |
17901700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 434 - 639
Target Start/End: Original strand, 27890074 - 27890281
Alignment:
| Q |
434 |
ttcacccaattatcatttggtctcttccaaccaataaacatagtttccttatgt--tggggattgactaacaaatgattttgagaactttcttctataac |
531 |
Q |
| |
|
||||||||| |||| |||||||||||| |||||| ||| | ||||||| ||| || ||||||| | |||||||||||||||||||||||| || | |
|
|
| T |
27890074 |
ttcacccaaccatcaactggtctcttccatccaatatacacaatttccttgtgtgttgaggattgattttcaaatgattttgagaactttcttcaatgaa |
27890173 |
T |
 |
| Q |
532 |
actaatgaaattttggataacaaaggttgggttagttggtctgtagaatccatctttgaaaattgatttgtttctacaagtccacaaatgccaacaagta |
631 |
Q |
| |
|
|| ||| |||||| ||||||| ||||||| ||||| ||||| | ||||| |||| ||||||||||||||||| |||||||||| |||||||| || |
|
|
| T |
27890174 |
cctgatgtaattttagataacataggttggattagtcggtctttggaatctttcttcaaaaattgatttgtttctcaaagtccacaagtgccaacaggtt |
27890273 |
T |
 |
| Q |
632 |
gtcatgaa |
639 |
Q |
| |
|
|||||||| |
|
|
| T |
27890274 |
gtcatgaa |
27890281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 740 - 929
Target Start/End: Original strand, 42161726 - 42161915
Alignment:
| Q |
740 |
aatctggaggcacaagtatattccatagctgatatgcatgcgtacacgtcacggagcacgtgcagaacatactcattttcattcctacaacatggacaag |
839 |
Q |
| |
|
||||||||| ||||||| || |||||| |||| |||||||| | || ||||| ||||| || | ||| ||||||| |||||| |||||| ||||||| |
|
|
| T |
42161726 |
aatctggagacacaagtctagtccatacctgagatgcatgcctgcaa-tcacgaagcacatgaataacggtctcatttgcattcccacaacaaggacaag |
42161824 |
T |
 |
| Q |
840 |
tgggtgatataccca-ccgccatctactttggcggcagttagtaagaatacatccatgagccactaaccacttgaaaatttgaatacgatg |
929 |
Q |
| |
|
| || || || || | || ||| |||||| | ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
42161825 |
taggcgaaattcctatcccccacctacttcgacggtagttagtaagaatacgaccatgagccactaaccacatgaaaatttgaataagatg |
42161915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 42161152 - 42161278
Alignment:
| Q |
150 |
gaatatgtcgaatcaatgaaggggtggttccgttgatcttgcaatgtttggtaaccatgtcaatacgcactttcgagtctttttcaataattaggtgaga |
249 |
Q |
| |
|
||||| |||||| || |||||| ||||||| ||||||||||||| || |||||||| |||||| ||||||| ||||| | |||| ||| | |||||| |
|
|
| T |
42161152 |
gaatacgtcgaaccagagaagggatggttccattgatcttgcaattgttagtaaccatatcaataagcacttttgagtcactctcaacaatcacgtgaga |
42161251 |
T |
 |
| Q |
250 |
tagaccttcttttcaagccatatcaag |
276 |
Q |
| |
|
|| ||| || | |||||||||||||| |
|
|
| T |
42161252 |
taaaccctcactccaagccatatcaag |
42161278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 119; Significance: 3e-60; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 158 - 1059
Target Start/End: Complemental strand, 43691721 - 43690825
Alignment:
| Q |
158 |
cgaatcaatgaaggggtggttccgttgatcttgcaatgtttggtaaccatgtcaatacgcactttcgagtctttttcaataattaggtgagatagacctt |
257 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||||||| |||||| ||||| || ||| |||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
43691721 |
cgaatcaaggaaggggtagttcctttgatcttgcaatttttggtgaccatatctataaacactttcgagtcactttcaacaattaggtgagatagacctt |
43691622 |
T |
 |
| Q |
258 |
cttttcaagccatatcaagtctcagatatggaccctgcatctttgcatgaaattcatcacaagtttcaattttttcgattaaatcctttaagccatagag |
357 |
Q |
| |
|
|| |||||||||||| ||||| |||||| ||||| |||| |||||| | | | ||| | | ||||||| ||| |||||| ||||| | | |
|
|
| T |
43691621 |
ctcttcaagccatatgaagtcccagatagagaccccatatctctgcatggagtgtagcactacctccaatttta-cgactaaatctcttaagtcgccta- |
43691524 |
T |
 |
| Q |
358 |
accatatgaatggcgaagaagccttccacatcctgcgatctttctattgcttttagaatctctgtcacaattaagcttcacccaattatcatttggtctc |
457 |
Q |
| |
|
|||| ||||| ||||| || || ||||||||| || |||| || |||||||||| | ||| |||| ||||||||||||| ||||||||||| || || |
|
|
| T |
43691523 |
-ccatctgaattgcgaa-aacccctccacatcccgcaatctctccattgcttttacatgctccatcacgattaagcttcaccaaattatcatttagtatc |
43691426 |
T |
 |
| Q |
458 |
----------ttccaaccaataaacatagtttccttatgttggggattgactaacaaatgattttgagaactttcttctataacactaatgaaattttgg |
547 |
Q |
| |
|
||| ||||||||||||||||| | ||||||||||||||| |||| ||||||||||||| ||||| |||| | |||||||||||||| |
|
|
| T |
43691425 |
atttagtatcttcttgccaataaacatagtttcttaatgttggggattgaccaacacatgattttgagaattttctgctatggctttaatgaaattttgg |
43691326 |
T |
 |
| Q |
548 |
ataacaaaggttgggttagttggtctgtagaatccatctttgaaaattgatttgtttctacaagtccacaaatgccaacaagtagtcatgaatgttgttt |
647 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||| |||| | ||||||||| ||||| || |||||| ||| ||||| |||| ||| |||||||||| |
|
|
| T |
43691325 |
ataacaaaggttgggttagttggtctttgaaatccttcttcg-taattgatttatttctcaaaatccacatatgtcaacatgtagccataaatgttgttt |
43691227 |
T |
 |
| Q |
648 |
tccaactattatcaacaactccattccacc-ttttgttgaggtttttgaaagcccaaattctgcaatcagtaaaagaaaaaagttagtgacccaatctgg |
746 |
Q |
| |
|
||| ||| ||| |||| | ||||||||| ||||||||||||||| |||||| || || | || | || ||||||||||||||||| ||| | |
|
|
| T |
43691226 |
gccacctagtat-aacagcctcattccacctttttgttgaggttttggaaagc---aagact---aacaaaagaaaaaaaaagttagtgacccgatccag |
43691134 |
T |
 |
| Q |
747 |
aggcacaagtatattccatagctgatatgcatgcgtacacgtcacggagcacgtgcagaacatactcattttcattcctacaacatggacaagtgggtga |
846 |
Q |
| |
|
|| |||||| |||| |||| || |||| |||||| | ||| | ||||| || | |||| | ||| |||||| ||| |||| ||||| || ||| |
|
|
| T |
43691133 |
agacacaagcctatttcatacttggtatgtttgcgtata-atcaagaagcacatgaataacaatcacatcttcatt-cta-aacagggacacatgaatga |
43691037 |
T |
 |
| Q |
847 |
tatacccaccgccatctactttggcggcagttagtaagaatacatccatgagccactaaccacttgaaaatttgaatacgatgtgttccccttcatttcc |
946 |
Q |
| |
|
|||||||||| |||||||||| ||| | ||||||| |||||| || |||||| ||||||||| | ||| |||||||| |||||| |||||| || |||| |
|
|
| T |
43691036 |
tatacccacccccatctacttcggcagtagttagtcagaatatgtctatgagcaactaaccacattaaagtttgaatatgatgtgatcccctccaattcc |
43690937 |
T |
 |
| Q |
947 |
attgtacttgtcaatccccctccgcaaaaacatgatttgaaacaaataaatcgtaagcactcttaacggaaaattgatgagtattaatgccaccccaccc |
1046 |
Q |
| |
|
|| | |||| ||||||||| || | | |||| ||||||||||||||||||||||| ||||| | ||||| |||||| |||| || | |||||||||| |
|
|
| T |
43690936 |
atagaacttctcaatccccttcag-agtaacacgatttgaaacaaataaatcgtaaacactcatgacggagaattgacaagtactagcgtcaccccaccc |
43690838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1081 - 1203
Target Start/End: Complemental strand, 43690625 - 43690504
Alignment:
| Q |
1081 |
gggattgctatgattttattagcaatattaacatgtagattcgtaaacaataaattgttgtctcaattaccagaagcattagttatatccttaacagtaa |
1180 |
Q |
| |
|
|||||||||| ||| |||| ||||||||| | |||||||| |||||| ||||||||||| ||||| ||| |||||||| ||| ||| |||||||||| |
|
|
| T |
43690625 |
gggattgctacaattatatttgcaatattataaggtagattctcaaacaagaaattgttgtcccaattccca-aagcattacttacatcattaacagtaa |
43690527 |
T |
 |
| Q |
1181 |
gagtgattttcaaaaaagtttga |
1203 |
Q |
| |
|
||||| | || ||||||| |||| |
|
|
| T |
43690526 |
gagtggtatttaaaaaagattga |
43690504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 703
Target Start/End: Original strand, 40536895 - 40537000
Alignment:
| Q |
598 |
tttgtttctacaagtccacaaatgccaacaagtagtcatgaatgttgttttccaactattatcaacaactccattccaccttttgttgaggtttttgaaa |
697 |
Q |
| |
|
||||||||| |||||||||| |||||| || ||||||||||| ||| | ||||| ||| ||| ||||||| || | |||||| | |||||||||||| |
|
|
| T |
40536895 |
tttgtttctccaagtccacagatgccagcatgtagtcatgaaagttttcttccacctaaactcagaaactccaatcgatcttttgctaaggtttttgaaa |
40536994 |
T |
 |
| Q |
698 |
gcccaa |
703 |
Q |
| |
|
||||| |
|
|
| T |
40536995 |
acccaa |
40537000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 6e-25; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 456 - 651
Target Start/End: Complemental strand, 26208336 - 26208141
Alignment:
| Q |
456 |
tcttccaaccaataaacatagtttccttatgttggggattgactaacaaatgattttgagaactttcttctataacactaatgaaattttggataacaaa |
555 |
Q |
| |
|
||||||| |||||| ||| |||| ||||| |||| ||||||| | |||||||||||||||||||||||| || | || ||| |||||||||||||| | |
|
|
| T |
26208336 |
tcttccatccaatatacacagttcccttaggttgaggattgatttgcaaatgattttgagaactttcttcaatgaacctgatgtaattttggataacata |
26208237 |
T |
 |
| Q |
556 |
ggttgggttagttggtctgtagaatccatctttgaaaattgatttgtttctacaagtccacaaatgccaacaagtagtcatgaatgttgttttcca |
651 |
Q |
| |
|
| ||| |||| ||||| | || ||| |||| |||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||| |
|
|
| T |
26208236 |
aggtggattagccggtctttggattccttcttcaaaaattgatttgtttcgccaagtccacaaatgccaacaggttgtcatgttagttgttttcca |
26208141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 875 - 931
Target Start/End: Complemental strand, 26207911 - 26207855
Alignment:
| Q |
875 |
agttagtaagaatacatccatgagccactaaccacttgaaaatttgaatacgatgtg |
931 |
Q |
| |
|
||||||| ||||||| || || |||||||||||| ||||||||||||||||||||| |
|
|
| T |
26207911 |
agttagtgagaatacgaccgtgtgccactaaccacatgaaaatttgaatacgatgtg |
26207855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000008; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 534 - 644
Target Start/End: Complemental strand, 32992964 - 32992854
Alignment:
| Q |
534 |
taatgaaattttggataacaaaggttgggttagttggtctgtagaatccatctttgaaaattgatttgtttctacaagtccacaaatgccaacaagtagt |
633 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||| |||||| | ||||| |||| ||||| | ||||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
32992964 |
taatgaaattttggatgacataagttgggttatctggtctttgaaatccttcttcaaaaatagctttgtttctccaagtccacatatgccaacatgtagt |
32992865 |
T |
 |
| Q |
634 |
catgaatgttg |
644 |
Q |
| |
|
|||||| |||| |
|
|
| T |
32992864 |
catgaaagttg |
32992854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 875 - 931
Target Start/End: Complemental strand, 46910957 - 46910901
Alignment:
| Q |
875 |
agttagtaagaatacatccatgagccactaaccacttgaaaatttgaatacgatgtg |
931 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
46910957 |
agtttgtaagaatacaaccatgagcaactaaccacatgaaagtttgaatacgatgtg |
46910901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 875 - 943
Target Start/End: Original strand, 45753481 - 45753549
Alignment:
| Q |
875 |
agttagtaagaatacatccatgagccactaaccacttgaaaatttgaatacgatgtgttccccttcatt |
943 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||| ||||| ||||||||||||||| |||||| |||| |
|
|
| T |
45753481 |
agtttgtaagaatacgaccatgagctactaaccacatgaaagtttgaatacgatgtggtcccctccatt |
45753549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 590 - 651
Target Start/End: Original strand, 41550567 - 41550628
Alignment:
| Q |
590 |
aaaattgatttgtttctacaagtccacaaatgccaacaagtagtcatgaatgttgttttcca |
651 |
Q |
| |
|
||||||| ||| |||| ||| ||||||||||| |||||||||||||||| ||||| ||||| |
|
|
| T |
41550567 |
aaaattgttttatttcgccaattccacaaatgctaacaagtagtcatgaaagttgtcttcca |
41550628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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