View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18173_high_45 (Length: 262)
Name: NF18173_high_45
Description: NF18173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18173_high_45 |
 | |
|
| [»] scaffold1701 (1 HSPs) |
| | |
|
| [»] scaffold0101 (2 HSPs) |
| | |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0323 (1 HSPs) |
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| [»] scaffold0304 (1 HSPs) |
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| [»] scaffold0270 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0081 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0001 (2 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0193 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0239 (1 HSPs) |
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| [»] scaffold0059 (1 HSPs) |
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| [»] scaffold0100 (1 HSPs) |
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| [»] scaffold0013 (2 HSPs) |
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| [»] scaffold0156 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 41369389 - 41369638
Alignment:
| Q |
1 |
cgatccaaagtactgttcatttcaacgaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaa |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |
|
|
| T |
41369389 |
cgatccaaagtactgttcatctcaacgaaccaaaaatttgaatctttatggcgcgcgtagaaggttcttcttctcaaccaacgaaacaacatgaaacaaa |
41369488 |
T |
|
| Q |
101 |
tgccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaac |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
41369489 |
tgccaatcttcccataaatactcagtttatggaagaaccagacgttaaagaagctgaagacagaatctggaaatcccaggtaattattccatgctcaaac |
41369588 |
T |
|
| Q |
201 |
tcatcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41369589 |
tcatcgcatgcatacctagggcctttgccggatgactccgacgatcagaa |
41369638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 22085774 - 22085551
Alignment:
| Q |
27 |
gaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaat |
126 |
Q |
| |
|
||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| | |
|
|
| T |
22085774 |
gaaacaaaaatttgaatctccatgactcgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctcagt |
22085675 |
T |
|
| Q |
127 |
ttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggccttt |
226 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085674 |
ttatggaagaaccagatgtcaaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggccttt |
22085575 |
T |
|
| Q |
227 |
gctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|| ||| ||||||||||||||||| |
|
|
| T |
22085574 |
gccggacgactccgacgatcagaa |
22085551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 238
Target Start/End: Original strand, 22795328 - 22795444
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| ||||||||||| || |||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
22795328 |
tcaattcatggaagaaccggatatcaaagaagctgaagataaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctaggg |
22795427 |
T |
|
| Q |
222 |
cctttgctggatgactc |
238 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
22795428 |
cctttgcaggatgactc |
22795444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 21309982 - 21309876
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||||| | ||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21309982 |
tcaatttatggaagagccagatatcaaggaagctgaagataaaatctagaaatcctaggtaatcatttcatgccctaactcatcgcatgcatacctaggg |
21309883 |
T |
|
| Q |
222 |
cctttgc |
228 |
Q |
| |
|
||||||| |
|
|
| T |
21309882 |
cctttgc |
21309876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 22685572 - 22685681
Alignment:
| Q |
126 |
tttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctt |
225 |
Q |
| |
|
||||||||||| ||||| |||| ||||||||||| | ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
22685572 |
tttatggaagagtcagacatcaaggaagctgaagataaaatctggaaatcccaggtaatcattccatgccctaactcatcgcatgcatacctaggacctt |
22685671 |
T |
|
| Q |
226 |
tgctggatga |
235 |
Q |
| |
|
||| |||||| |
|
|
| T |
22685672 |
tgccggatga |
22685681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 4567490 - 4567412
Alignment:
| Q |
135 |
gaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
||||||||| | || ||||||||||| | |||||| |||||||||||||||| |||||||| |||||| ||||||||| |
|
|
| T |
4567490 |
gaaccagacattaaggaagctgaagataaaatctgaaaatcccaggtaattaactcatgccctaactcaccgcatgcat |
4567412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 1734710 - 1734461
Alignment:
| Q |
1 |
cgatccaaagtactgttcatttcaacgaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaa |
100 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||||||| || || |||||||||||||||| ||||||||||||| ||||||||| ||| |||| |
|
|
| T |
1734710 |
cgatccaaagtactgttcatcttaacgaaccaaaaatttgaatttttatcgcgcgcgtagaaggttcgtcttctcaaccaatgaaacaacatgaaacaaa |
1734611 |
T |
|
| Q |
101 |
tgccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaac |
200 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
1734610 |
tgccaatctttccataaatactcagtttatggaagaaccagacgttaaagaagctgaagacagaatctggaaatcccaggtaattattccatgctcaaac |
1734511 |
T |
|
| Q |
201 |
tcatcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
1734510 |
tcatcgcatgcatacctagggcctttgccggatgactccaacgatcagaa |
1734461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 22334254 - 22334380
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
22334254 |
tcaatttatggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcccagataattatctcatgcccaaattcatcgcatgcatacctaggg |
22334353 |
T |
|
| Q |
222 |
cctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||| ||| ||||| ||||||||| |
|
|
| T |
22334354 |
cctttgccggacgactctgacgatcag |
22334380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1701 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold1701
Description:
Target: scaffold1701; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 6 - 250
Target Start/End: Complemental strand, 1350 - 1103
Alignment:
| Q |
6 |
caaagtactgttcatt--tcaacgaaacaaaaatttgaa-tcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatg |
102 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
1350 |
caaaatactgttcattattcaacaaaacaaaattttgaaatcttcatggcgcgcgtagaaggttcttcttctcaaccaacgaaacaacatgaaccaaatg |
1251 |
T |
|
| Q |
103 |
ccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactc |
202 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
1250 |
tcaatctccccataaatactcagtttatggaagaaccagacgtcagggaagctgaagacagaatctggaaatcccaggtaatcatctcatgcccaaactc |
1151 |
T |
|
| Q |
203 |
atcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
1150 |
atcgcatgcatacctagggcctttgccggacgactccgacgatcagaa |
1103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 10791904 - 10791654
Alignment:
| Q |
1 |
cgatccaaagtactgttcatttcaacgaaacaaaaattt-gaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaa |
99 |
Q |
| |
|
||||||||| |||||||||| |||||||| ||||| ||| |||| || |||| |||| ||||||||| |||||||||| ||| ||| ||||| ||| ||| |
|
|
| T |
10791904 |
cgatccaaaatactgttcatctcaacgaaccaaaatttttgaatttttatggtgcgcatagaaggttcttcttctcaatcaatgaagcaacaagaaacaa |
10791805 |
T |
|
| Q |
100 |
atgccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaa |
199 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
10791804 |
atgccaatctttccataaatactcagtttatggaagaaccagacgtcaaagaagctaaagacagaatctggaaatcccaggtaattattccatgctcaaa |
10791705 |
T |
|
| Q |
200 |
ctcatcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10791704 |
ctcatcgcatgcatacctagggcctttgccggatgactccgacgatcagaa |
10791654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 14683889 - 14684135
Alignment:
| Q |
6 |
caaagtactgttcattt---caacgaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatg |
102 |
Q |
| |
|
||||||||||||||||| ||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
14683889 |
caaagtactgttcatttattcaacgaaacaaca-tttgaatcctcatggcgcacatagaaggttcttcttctcaaccaacgaaacaacacgaaccaaatg |
14683987 |
T |
|
| Q |
103 |
ccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactc |
202 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||| |||| |
|
|
| T |
14683988 |
tcaatcttcccgtaaatactcagttcatggaagaaccagacgtcagagaagctgaagacagaatctggaaatcccaggtaatcatctcatgcccagactc |
14684087 |
T |
|
| Q |
203 |
atcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||||||||| ||| || |||||||||||||| |
|
|
| T |
14684088 |
atcgcatgcatacctagggcctttgccggacgattccgacgatcagaa |
14684135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 7342241 - 7342450
Alignment:
| Q |
41 |
aatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaacca |
140 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
7342241 |
aatcttcatggcgcgcgtagaaggctcttcttctcaaccaacgaaacaacatgaaccaaatgtcaatctccccaaaaatactcagtttatggaagaacca |
7342340 |
T |
|
| Q |
141 |
gacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccg |
240 |
Q |
| |
|
||||| ||||||||||| |||| ||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| | ||||| |
|
|
| T |
7342341 |
gacgttaaagaagctgaggacaaaatctggaaatcccatgtaatcatctcatgcccaaactcatcacatgcatacctagggcctttgctggacggctccg |
7342440 |
T |
|
| Q |
241 |
acgatcagaa |
250 |
Q |
| |
|
|||||||||| |
|
|
| T |
7342441 |
acgatcagaa |
7342450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 10170513 - 10170294
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
||||||||| | ||||||| || ||| ||||||| |||||||||| |||| ||||| || |||||||||| |||||||| | |||| |||||||||| |
|
|
| T |
10170513 |
caaaaatttataacttcatgacgtgcgctgaaggttcttcttctcaatcaacaaaacagcatgaaccaaatgtcaatcttctcggaaatcctcaatttat |
10170414 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
||||||||| || || |||||||||||||||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||| | |
|
|
| T |
10170413 |
ggaagaaccggatgttaaagaagctgaagacaaaatatggaaatcccaggtaatcatctcatgcccaaattcatcgcatgcatacctaaggcctttgccg |
10170314 |
T |
|
| Q |
231 |
gatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10170313 |
gatgactccgacgatcagaa |
10170294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 12022385 - 12022497
Alignment:
| Q |
116 |
aaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatac |
215 |
Q |
| |
|
||||| ||| ||||| ||||||||||| ||||| ||||| ||||| | ||||| ||||||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
12022385 |
aaatattcagtttattgaagaaccagatgtcaaggaagcggaagataaaatctagaaatcccaggtaatcatctcatgccctaactcatcgcatgcatat |
12022484 |
T |
|
| Q |
216 |
ctagggcctttgc |
228 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12022485 |
ctagggcctttgc |
12022497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 12845530 - 12845624
Alignment:
| Q |
126 |
tttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagg |
220 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| || |||||||| || ||||| |||||||| ||||| |
|
|
| T |
12845530 |
tttatagaagaaccagacgtcagggaagcggaagacaaaatatggaaatcccaggtaatcatctcatgccctaattcatcacatgcatatctagg |
12845624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 133388 - 133469
Alignment:
| Q |
132 |
gaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
||||||||| || | || ||||||||||| | ||| ||||||| |||||||||||| ||||||| || ||| ||||||||| |
|
|
| T |
133388 |
gaagaaccaaacattaaggaagctgaagataaaatatggaaattccaggtaattatctcatgccttaattcaccgcatgcat |
133469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 14324452 - 14324699
Alignment:
| Q |
6 |
caaagtactgttcatt--tcaacgaaacaaaaatttgaa-tcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatg |
102 |
Q |
| |
|
|||| ||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
14324452 |
caaaatactgttcattattcaacaaaacaaaattttgaaatcttcatggcgcgcgtagaaggttcttcttctcaaccaacaaaacaacatgaaccaaatg |
14324551 |
T |
|
| Q |
103 |
ccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactc |
202 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
14324552 |
tcaatctccccataaatactcagtttatggaagaaccagacgtcagggaagctgaagacaaaatatggaaatcccaggtaatcatctcatgcccaaactc |
14324651 |
T |
|
| Q |
203 |
atcgcatgcatacctagggcctttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
14324652 |
atcgcatgcatacctagggcctttgccggacgactccgacgatcagaa |
14324699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 18160344 - 18160428
Alignment:
| Q |
164 |
aatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
18160344 |
aatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgccggatgactccgatgatcag |
18160428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 10828755 - 10828835
Alignment:
| Q |
133 |
aagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
|||||||| || ||||||||||||| || | ||||||||||||||||||||| ||| ||||||| || ||| ||||||||| |
|
|
| T |
10828755 |
aagaaccatacatcaaagaagctgatgataaaatctggaaatcccaggtaatcattccatgccctaattcaccgcatgcat |
10828835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 11022547 - 11022627
Alignment:
| Q |
133 |
aagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
|||||||| || ||||||||||||| || | ||||||||||||||||||||| ||| ||||||| || ||| ||||||||| |
|
|
| T |
11022547 |
aagaaccatacatcaaagaagctgatgataaaatctggaaatcccaggtaatcattccatgccctaattcaccgcatgcat |
11022627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 10863299 - 10863237
Alignment:
| Q |
164 |
aatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggccttt |
226 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||| || ||| ||||||||| |||||||||| |
|
|
| T |
10863299 |
aatctggaaatcccaggtaatcattccatgccctaattcaccgcatgcatttttagggccttt |
10863237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 13347341 - 13347422
Alignment:
| Q |
132 |
gaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
|||||||| ||| | || ||||||||||| | ||||||||||||||||||||| || |||| ||| || ||| | ||||||| |
|
|
| T |
13347341 |
gaagaacctgacattaaggaagctgaagataaaatctggaaatcccaggtaatcatctcataccctaattcaccacatgcat |
13347422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 47029 - 47252
Alignment:
| Q |
27 |
gaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaat |
126 |
Q |
| |
|
||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| | |
|
|
| T |
47029 |
gaaacaaaaatttgaatctccatgacacgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctcagt |
47128 |
T |
|
| Q |
127 |
ttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggccttt |
226 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47129 |
ttatggaagaaccagatgtcaaagaagatgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggccttt |
47228 |
T |
|
| Q |
227 |
gctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|| ||| ||||||||||||||||| |
|
|
| T |
47229 |
gccggacgactccgacgatcagaa |
47252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 51667 - 51890
Alignment:
| Q |
27 |
gaaacaaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaat |
126 |
Q |
| |
|
||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| | |
|
|
| T |
51667 |
gaaacaaaaatttgaatctccatgacacgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctcagt |
51766 |
T |
|
| Q |
127 |
ttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggccttt |
226 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
51767 |
ttatggaagaaccagatgtcaaagaagatgaagacaaaatctggaaatcccaggtaatcatatcatgcccaaactaatcacatgcatacctagggccttt |
51866 |
T |
|
| Q |
227 |
gctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|| ||| ||||||||||||||||| |
|
|
| T |
51867 |
gccggacgactccgacgatcagaa |
51890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 40709 - 40490
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
|||||||||| | ||||||| |||||| ||||||| |||||||||| |||| |||||||| |||||||| | ||| |||||||||||| |||||||||| |
|
|
| T |
40709 |
caaaaatttgtaacttcatgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaaacgtcaaacttcccataaatcctcaatttat |
40610 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
||||||||| || || |||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
40609 |
ggaagaaccggatgttaaagaagctgaagacaaaatatggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctagggcctttgccg |
40510 |
T |
|
| Q |
231 |
gatgactccgacgatcagaa |
250 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
40509 |
gatgactccgatgatcagaa |
40490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0323 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0323
Description:
Target: scaffold0323; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 3885 - 3682
Alignment:
| Q |
47 |
catggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtc |
146 |
Q |
| |
|
|||| |||||| |||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||| | || |
|
|
| T |
3885 |
catgacgcgcgcagaaggttattcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccataaatcctcagtttatggaagaaccatatatc |
3786 |
T |
|
| Q |
147 |
aaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |
|
|
| T |
3785 |
aaagaagctgaagacaaaatctggaaatctcagctaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgccggacgactccgaagatc |
3686 |
T |
|
| Q |
247 |
agaa |
250 |
Q |
| |
|
|||| |
|
|
| T |
3685 |
agaa |
3682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 33 - 247
Target Start/End: Original strand, 6540 - 6754
Alignment:
| Q |
33 |
aaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatgg |
132 |
Q |
| |
|
|||||||| | | ||||| |||||| ||||||| |||||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
6540 |
aaaatttgtaacctcatgacgcgcggtgaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccgtaaatcctcaatttatgg |
6639 |
T |
|
| Q |
133 |
aagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctgga |
232 |
Q |
| |
|
|||||| || |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6640 |
aagaacaggatatcaaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgtcgga |
6739 |
T |
|
| Q |
233 |
tgactccgacgatca |
247 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
6740 |
tgactccgatgatca |
6754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 47 - 248
Target Start/End: Complemental strand, 22647912 - 22647711
Alignment:
| Q |
47 |
catggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtc |
146 |
Q |
| |
|
|||| |||||| ||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||| || || |
|
|
| T |
22647912 |
catgacgcgcgctgaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccataaatcctcagtttatggaagaaccggatatc |
22647813 |
T |
|
| Q |
147 |
aaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
22647812 |
aaagaagctgaagacaaaatatggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgtcggatgactccgatgatc |
22647713 |
T |
|
| Q |
247 |
ag |
248 |
Q |
| |
|
|| |
|
|
| T |
22647712 |
ag |
22647711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 23615899 - 23616102
Alignment:
| Q |
47 |
catggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtc |
146 |
Q |
| |
|
|||| |||||| ||||||| |||||||||| |||| |||||||| ||| |||||| |||||||| ||||||| ||||||||||||||||||| | || |
|
|
| T |
23615899 |
catgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaacaaatgtcaatcttctcataaatcctcaatttatggaagaaccgggtctc |
23615998 |
T |
|
| Q |
147 |
aaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
23615999 |
aaagaagctgaagacaaaatctggaaatcccaggtaatcatttcatgtccaaactcatcacatgcatacctagggcctttgccggatgactccgatgatc |
23616098 |
T |
|
| Q |
247 |
agaa |
250 |
Q |
| |
|
|||| |
|
|
| T |
23616099 |
agaa |
23616102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 47 - 248
Target Start/End: Original strand, 23612243 - 23612444
Alignment:
| Q |
47 |
catggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtc |
146 |
Q |
| |
|
|||| |||||| ||||||| |||||||||| |||| ||| | || ||||||||| |||||||||||||||| |||| |||||||||||||| || || |
|
|
| T |
23612243 |
catgacgcgcgctgaaggttcttcttctcaatcaactaaatatcatgaaccaaatttcaatcttcccataaatcctcagtttatggaagaaccggatatc |
23612342 |
T |
|
| Q |
147 |
aaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
23612343 |
aaagaagctgaagacaaaatctggaaatcctaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgccggatgactccgatgatc |
23612442 |
T |
|
| Q |
247 |
ag |
248 |
Q |
| |
|
|| |
|
|
| T |
23612443 |
ag |
23612444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 93 - 248
Target Start/End: Original strand, 23191372 - 23191527
Alignment:
| Q |
93 |
gaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcat |
192 |
Q |
| |
|
||||||||| |||||||||| ||| | |||| |||| ||||||||| || |||||||||||||||||| ||||||||||||| ||||||| || |||| |
|
|
| T |
23191372 |
gaaccaaatatcaatcttcccgtaagtcctcagtttagggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcctaggtaatcatctcat |
23191471 |
T |
|
| Q |
193 |
gcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
23191472 |
gcccaaactcatcgcatgcatacctagggcctttgccggatgactccgatgatcag |
23191527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 23617020 - 23617145
Alignment:
| Q |
125 |
atttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcct |
224 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
23617020 |
atttatggaagaaccgggtctcaaagaagctgaagacaaaatctggaaatcccaggtaatcatttcatgtccaaactcatcacatgcatacctagggcct |
23617119 |
T |
|
| Q |
225 |
ttgctggatgactccgacgatcagaa |
250 |
Q |
| |
|
|||| |||||||||||| |||||||| |
|
|
| T |
23617120 |
ttgccggatgactccgatgatcagaa |
23617145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0270
Description:
Target: scaffold0270; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 15979 - 16179
Alignment:
| Q |
46 |
tcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgt |
145 |
Q |
| |
|
||||| |||||| |||||||| |||||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||||| || || |
|
|
| T |
15979 |
tcatgacgcgcgcagaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccgtaaattctcaatttatggaagaaccggatgt |
16078 |
T |
|
| Q |
146 |
caaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgat |
245 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||| |
|
|
| T |
16079 |
tagagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgtccaaactcatcgcatgcatacctagggcctgtgccggatgactccgatgat |
16178 |
T |
|
| Q |
246 |
c |
246 |
Q |
| |
|
| |
|
|
| T |
16179 |
c |
16179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 14557657 - 14557857
Alignment:
| Q |
46 |
tcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgt |
145 |
Q |
| |
|
||||| |||||| ||||||| |||||||||| ||||||||||||| ||| | |||| |||||||||| ||||| |||||||||||||||||||||| || |
|
|
| T |
14557657 |
tcatgacgcgcgcggaaggttcttcttctcaatcaacgaaacaacatgaaacgaatgtcaatcttcccgtaaattctcaatttatggaagaaccagatgt |
14557756 |
T |
|
| Q |
146 |
caaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgat |
245 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
14557757 |
caaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgtccaaactcatcgcatgcatacctagggcctttgccggacgactccgatgat |
14557856 |
T |
|
| Q |
246 |
c |
246 |
Q |
| |
|
| |
|
|
| T |
14557857 |
c |
14557857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 13277979 - 13278189
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
|||||| ||| | ||||||| |||||| ||||||| ||||||| | |||| ||||| || |||||||||| ||||||||| | |||| |||||||||| |
|
|
| T |
13277979 |
caaaaacttgtaacttcatgacgcgcgctgaaggttcttcttcttattcaacaaaacagcatgaaccaaatgtcaatcttccaaaaaatcctcaatttat |
13278078 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
|||||||||||| || |||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
13278079 |
ggaagaaccagatgtaaaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaattcatcgcatgcatacctagggcctttgccg |
13278178 |
T |
|
| Q |
231 |
gatgactccga |
241 |
Q |
| |
|
||||||||||| |
|
|
| T |
13278179 |
gatgactccga |
13278189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 14714983 - 14715109
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| ||||||||||| || |||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
14714983 |
tcaattcatggaagaaccggatatcaaagaagctgaagataaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctaggg |
14715082 |
T |
|
| Q |
222 |
cctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||| ||||||||| |||||||| |
|
|
| T |
14715083 |
cctttgccggatgactcaaacgatcag |
14715109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 31 - 250
Target Start/End: Complemental strand, 79167 - 78948
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
|||||||||| |||| |||| |||||| ||||||| ||| |||||| ||||||||||| | |||||||||| |||||||| ||||| |||| ||||| |
|
|
| T |
79167 |
caaaaatttgtatctccatgacgcgcgctgaaggttcttcctctcaatcaacgaaacaagatgaaccaaatgttaatcttcctgtaaatcctcagtttat |
79068 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
79067 |
ggaagaaccagatatcaaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgccg |
78968 |
T |
|
| Q |
231 |
gatgactccgacgatcagaa |
250 |
Q |
| |
|
|| |||||||| |||||||| |
|
|
| T |
78967 |
gacgactccgatgatcagaa |
78948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 31 - 248
Target Start/End: Complemental strand, 23495927 - 23495710
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
|||||||||| | || |||| |||||| ||||||| |||||||||| |||| |||||||| |||||||||| |||||||||||||||| |||| ||||| |
|
|
| T |
23495927 |
caaaaatttgtaactccatgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaaatgtcaatcttcccataaatcctcagtttat |
23495828 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
||||||||| || ||||||||| |||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23495827 |
ggaagaaccggatatcaaagaagatgaagacaaaatctggaaatcccaggtaatcatcttatgcccaaactcatcgcatgcatacctagggcctttgccg |
23495728 |
T |
|
| Q |
231 |
gatgactccgacgatcag |
248 |
Q |
| |
|
|||||||| || |||||| |
|
|
| T |
23495727 |
gatgactctgatgatcag |
23495710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 60 - 247
Target Start/End: Original strand, 19026167 - 19026357
Alignment:
| Q |
60 |
gaaggttgttcttctcaaccaacgaaacaacaggaaccaa---atgccaatcttcccataaatactcaatttatggaagaaccagacgtcaaagaagctg |
156 |
Q |
| |
|
||||||| |||||||||| |||| ||||| || ||||||| ||| ||||||||||| |||| || |||||||||||||| | || |||||||||||| |
|
|
| T |
19026167 |
gaaggttcttcttctcaatcaacaaaacagcatgaaccaactaatgtcaatcttcccaaaaatcctaaatttatggaagaatcggatatcaaagaagctg |
19026266 |
T |
|
| Q |
157 |
aagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatca |
247 |
Q |
| |
|
|||||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||| |
|
|
| T |
19026267 |
aagacaaaatctggaaatcccaggtaatcatctcatgcccaaattcatcgcatgcatacctagggtctttgccggatgactccgatgatca |
19026357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 47 - 248
Target Start/End: Complemental strand, 43565 - 43364
Alignment:
| Q |
47 |
catggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttatggaagaaccagacgtc |
146 |
Q |
| |
|
|||| |||||| ||||||| ||| |||||| ||||||||||||| ||||| |||| ||||||||||||||| |||| ||||| ||||||| || || |
|
|
| T |
43565 |
catgacgcgcgctgaaggttcttcctctcaatcaacgaaacaacatgaacccaatgtcaatcttcccataaaccctcagtttattgaagaactggatatc |
43466 |
T |
|
| Q |
147 |
aaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
43465 |
aaagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgcccaaactcatcgcatgcatacctagggcctttgccggatgactccgatgatc |
43366 |
T |
|
| Q |
247 |
ag |
248 |
Q |
| |
|
|| |
|
|
| T |
43365 |
ag |
43364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 31 - 248
Target Start/End: Complemental strand, 57873 - 57656
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgccaatcttcccataaatactcaatttat |
130 |
Q |
| |
|
|||||| ||| | ||||||| |||||| ||||| | ||||||| | |||||||| | || ||||||||| ||||||||| | |||| |||||||||| |
|
|
| T |
57873 |
caaaaacttgcaacttcatgacgcgcgctgaaggctcttcttcttattcaacgaaatagcatgaaccaaatatcaatcttccaaaaaatcctcaatttat |
57774 |
T |
|
| Q |
131 |
ggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctg |
230 |
Q |
| |
|
||||||||| || || |||||||||||||||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
57773 |
ggaagaaccggatgtaaaagaagctgaagacaaaatttggaaatcccaggtaatcatctcatgcccaaattcatcgcatgcatacctagggcctttgccg |
57674 |
T |
|
| Q |
231 |
gatgactccgacgatcag |
248 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
57673 |
gatgactccgatgatcag |
57656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0081 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0081
Description:
Target: scaffold0081; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 120 - 248
Target Start/End: Original strand, 45073 - 45201
Alignment:
| Q |
120 |
actcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctag |
219 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
45073 |
actcaatttatggaagaaccggatgtcaaagaagctgaagacaaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctag |
45172 |
T |
|
| Q |
220 |
ggcctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||||| ||||||||| || |||||| |
|
|
| T |
45173 |
ggcctttgccggatgactctgatgatcag |
45201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 84324 - 84198
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |
|
|
| T |
84324 |
tcaatttatggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgtatacctaggg |
84225 |
T |
|
| Q |
222 |
cctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||| ||||||||| ||||||||| |
|
|
| T |
84224 |
cctttgccggatgactctgacgatcag |
84198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 21902 - 21803
Alignment:
| Q |
129 |
atggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgc |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21902 |
atggaagaaccagacatcaaagaagctgaagataaaatctggaaatcccaggtaatcatctcatgccccaactcatcgcatgcatacctagggcctttgc |
21803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 31 - 248
Target Start/End: Complemental strand, 21529686 - 21529466
Alignment:
| Q |
31 |
caaaaatttgaatcttcatggcgcgcgtagaaggttgttcttctcaaccaacgaaacaacaggaaccaaatgc---caatcttcccataaatactcaatt |
127 |
Q |
| |
|
|||||| ||| | ||||||| |||||| ||||||| |||||||||| |||| |||||||| ||||||| || ||| |||| | |||| |||||| |
|
|
| T |
21529686 |
caaaaaattgtaacttcatgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaactgatatcaaccttcgcggaaatcttcaatt |
21529587 |
T |
|
| Q |
128 |
tatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttg |
227 |
Q |
| |
|
|||||||||| | || |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21529586 |
tatggaagaatcggatatcaaagaaactgaagacaaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctagggcctttg |
21529487 |
T |
|
| Q |
228 |
ctggatgactccgacgatcag |
248 |
Q |
| |
|
| ||||||||| || |||||| |
|
|
| T |
21529486 |
ccggatgactctgatgatcag |
21529466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 389368 - 389251
Alignment:
| Q |
129 |
atggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgc |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
389368 |
atggaagaaccagacatcaaagaagctgaagataaaatctggaaatcccaggtaattatctcatgccccaactcatcgcatgcatacctagggtctttgc |
389269 |
T |
|
| Q |
229 |
tggatgactccgacgatc |
246 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
389268 |
cggatgactccgacgatc |
389251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 116205 - 116308
Alignment:
| Q |
145 |
tcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacga |
244 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| | |||||||| | || |
|
|
| T |
116205 |
tcaaagaaactgaagacaaaatctggaaatcccaggtaattatctcatgcccaaattcatcacatgcatacctagggcctttgccgaatgactccaatga |
116304 |
T |
|
| Q |
245 |
tcag |
248 |
Q |
| |
|
|||| |
|
|
| T |
116305 |
tcag |
116308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 24387 - 24247
Alignment:
| Q |
108 |
cttcccataaatactcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgc |
207 |
Q |
| |
|
|||| ||||||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| ||||||| |
|
|
| T |
24387 |
cttcgcataaatcttcaatttatggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcctaggtaattatctcatgtccaaattcatcgc |
24288 |
T |
|
| Q |
208 |
atgcatacctagggcctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
24287 |
atgcatacctagggcctttgccggatgactccggcgatcag |
24247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 120 - 248
Target Start/End: Original strand, 27588 - 27716
Alignment:
| Q |
120 |
actcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctag |
219 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
27588 |
actcaatttatggaagaaccggatgtcaatgaagctgaagacaaaatctggaaatcccaggtaattatctcatgcccaaattcatcgcatgcatacctag |
27687 |
T |
|
| Q |
220 |
ggcctttgctggatgactccgacgatcag |
248 |
Q |
| |
|
|||||||| ||||||||| || |||||| |
|
|
| T |
27688 |
ggcctttgtcggatgactctgatgatcag |
27716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 30176 - 30300
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
30176 |
tcaattcatggaagaaccggacatcaaagaagctgaagataaaatctggaaatcccaggtaattatctcctgcccaaactcatcgcatgcatacctaggg |
30275 |
T |
|
| Q |
222 |
cctttgctggatgactccgacgatc |
246 |
Q |
| |
|
||||||| |||||||| ||| |||| |
|
|
| T |
30276 |
cctttgccggatgactgcgatgatc |
30300 |
T |
|
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Target: scaffold0019 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 152251 - 152368
Alignment:
| Q |
129 |
atggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgc |
228 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
152251 |
atggaagaaccagacatcaaagaagctgaagatgaaatctggaaatcccaagtaattatctcatgccccaactcatcgcatgcatacctagggcctttgc |
152350 |
T |
|
| Q |
229 |
tggatgactccgacgatc |
246 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
152351 |
cggatgactccgaagatc |
152368 |
T |
|
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Target: scaffold0026 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 119165 - 119268
Alignment:
| Q |
145 |
tcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgctggatgactccgacga |
244 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
119165 |
tcaaagaagctgaggataaaatctggaaatcccaggtaattatctcatgtccaaactcatcgcatgcatacctagggcctttgccggatgactccgacga |
119264 |
T |
|
| Q |
245 |
tcag |
248 |
Q |
| |
|
|||| |
|
|
| T |
119265 |
tcag |
119268 |
T |
|
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Target: scaffold0107 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 28432 - 28315
Alignment:
| Q |
129 |
atggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgc |
228 |
Q |
| |
|
||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||| || || || |||||||||||||||||||||||||||||| |
|
|
| T |
28432 |
atggaagaaccagacatcaaagaaggtgaagataaaatctggaaatcccaggtaattatctcgtgtcccaactcatcgcatgcatacctagggcctttgt |
28333 |
T |
|
| Q |
229 |
tggatgactccgacgatc |
246 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
28332 |
cgcatgactctgacgatc |
28315 |
T |
|
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Target: scaffold0239 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 17927 - 18030
Alignment:
| Q |
126 |
tttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctt |
225 |
Q |
| |
|
||||| ||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||| || ||||| || || |||||||||||||| |||||||||| |
|
|
| T |
17927 |
tttatagaagaaccagatgtcaaggaagcggaagataaaatctggaaatcccaggtaatcatctcatgtcctaattcatcgcatgcatatctagggcctt |
18026 |
T |
|
| Q |
226 |
tgct |
229 |
Q |
| |
|
|||| |
|
|
| T |
18027 |
tgct |
18030 |
T |
|
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Target: scaffold0059 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 71694 - 71796
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| |||||||||||||||||| | ||||| ||||| | ||||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||| |
|
|
| T |
71694 |
tcaattcatggaagaaccagacgtccaggaagcggaagataaaatctggaaatcccaggtaattagctcatgccctaactcaccacatgcatacttaggg |
71793 |
T |
|
| Q |
222 |
cct |
224 |
Q |
| |
|
||| |
|
|
| T |
71794 |
cct |
71796 |
T |
|
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Target: scaffold0100 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 8563 - 8472
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcat |
213 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||| || | |||||||||||||||||||||||| || ||||| |||||| | ||||||| |
|
|
| T |
8563 |
tcaatttatggaagaaccagacatcaaggaagctgaggataaaatctggaaatcccaggtaattatctcgtgccctaactcaccacatgcat |
8472 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 119112 - 119010
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| ||||||||||||||||| | ||||| ||||| | |||||||| |||||||||||| || |||||||| |||||| | ||||||||| ||||| |
|
|
| T |
119112 |
tcaattcatggaagaaccagacgttagggaagcggaagataaaatctggagatcccaggtaatcatctcatgccctaactcaccacatgcatacttaggg |
119013 |
T |
|
| Q |
222 |
cct |
224 |
Q |
| |
|
||| |
|
|
| T |
119012 |
cct |
119010 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 126956 - 126854
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctaggg |
221 |
Q |
| |
|
|||||| |||||||||| |||||| | ||||| ||||| | ||||||||||||||||||||| || |||||||| |||||| | ||||||||| ||||| |
|
|
| T |
126956 |
tcaattcatggaagaactagacgttagggaagcggaagataaaatctggaaatcccaggtaatcatctcatgccctaactcacctcatgcatacttaggg |
126857 |
T |
|
| Q |
222 |
cct |
224 |
Q |
| |
|
||| |
|
|
| T |
126856 |
cct |
126854 |
T |
|
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Target: scaffold0156 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0156
Description:
Target: scaffold0156; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 19159 - 19233
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgccc |
196 |
Q |
| |
|
|||||| ||||| |||||||| ||||| |||||||| || | ||||||||||||||||||||| ||| ||||||| |
|
|
| T |
19159 |
tcaattcatggaggaaccagatgtcaaggaagctgaggaaaaaatctggaaatcccaggtaatcattccatgccc |
19233 |
T |
|
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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 6592 - 6500
Alignment:
| Q |
122 |
tcaatttatggaagaaccagacgtcaaagaagctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcata |
214 |
Q |
| |
|
|||||| ||||||||||| ||| |||| ||| |||| || | ||||||||||||||| |||||||| || ||||| |||||| | |||||||| |
|
|
| T |
6592 |
tcaattcatggaagaaccggacatcaaggaacctgaggataaaatctggaaatcccatgtaattatctcgtgccctaactcaccacatgcata |
6500 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 30110 - 30035
Alignment:
| Q |
153 |
gctgaagacagaatctggaaatcccaggtaattatttcatgcccaaactcatcgcatgcatacctagggcctttgc |
228 |
Q |
| |
|
|||||||| | ||||| ||||||||||||||| || |||||||| ||||||| | ||||||| |||||||| |||| |
|
|
| T |
30110 |
gctgaagataaaatctagaaatcccaggtaatcatctcatgccccaactcatagtatgcataactagggcccttgc |
30035 |
T |
|
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