View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18173_high_71 (Length: 228)
Name: NF18173_high_71
Description: NF18173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18173_high_71 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 37408240 - 37408450
Alignment:
| Q |
18 |
aacaaacagtaaatacagaaattagatgctatattctttccaaaactaatatatttaaaactttcatgcatgatgttaattcttctcaaacctatataca |
117 |
Q |
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| T |
37408240 |
aacaaacagtaaatacagaaattagatgctatattctttccaaaactaatatatttaaaactttcatgcatgatgttaattcttctcaaacctatataca |
37408339 |
T |
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| Q |
118 |
acaaagtacagacacgaaatttcatttgtatacaaacttaactaattttccaaataacgtagtaactattatggaccgatcaatctaaaatgaatggtag |
217 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37408340 |
acaaagtacagacacgaaatttcatttggatacaaacttaactaattttccaaataacgtagtaactattatggaccgttcaatctaaaatgaatggtag |
37408439 |
T |
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| Q |
218 |
aaatgtaaaac |
228 |
Q |
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||||||||||| |
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| T |
37408440 |
aaatgtaaaac |
37408450 |
T |
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