View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18173_high_81 (Length: 209)
Name: NF18173_high_81
Description: NF18173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18173_high_81 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 33398657 - 33398475
Alignment:
| Q |
11 |
agcagagaatgaaaaattaaatactaataatgcataactaaaagtttctcttcttttcaatgtatttgtgaaaaagataatataaaccaaattgcaaagt |
110 |
Q |
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| T |
33398657 |
agcaaagaatgaaaaattaaatactaataatgcataactaaaagtttctcttcttttcaatgtatttgtgaaaaagataatataaaccaaattgcaaagt |
33398558 |
T |
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| Q |
111 |
cagaaa--atattttatgtctgtatcaagtgcaatgatattgtttatgaatgttctatgcattcggagcaagcatggattgat |
191 |
Q |
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| T |
33398557 |
cagaaaatatattttatgtctatatcaagtgcaatgatattgtttatgaatgttctatgcattcggagcaagcatggattgat |
33398475 |
T |
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