View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18173_low_68 (Length: 237)
Name: NF18173_low_68
Description: NF18173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18173_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 33398806 - 33399039
Alignment:
| Q |
1 |
acgggagatgacacaggtcacatgactatcacacgcactgctgtccggcttgacaaggccaggcttgagctatgcggtgttttattttttgcggactatg |
100 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33398806 |
acgggagatgacaaaggtcacatgactatcacacgcactgctgtccggcttgacaaggccaggcttgagctatgcggtgttttattttttgcggactatg |
33398905 |
T |
|
| Q |
101 |
cgtcgctgtccggctcgacaagccattcaaaaacctgtctactttgcaatactaataagaaagttctactttgttcaatgttagttttaagataacttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33398906 |
cgtcgctgtccggctcgacaagccattcaaaaacctgtctactttgcaatactaataagaaagttctactttgttcaatgttagttttaagataacttta |
33399005 |
T |
|
| Q |
201 |
tttaccataaatcatagtaacaccagtacacaat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
33399006 |
tttaccataaatcatagtaacaccagtacacaat |
33399039 |
T |
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