View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18174_low_5 (Length: 304)
Name: NF18174_low_5
Description: NF18174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18174_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 17 - 288
Target Start/End: Original strand, 4642465 - 4642736
Alignment:
| Q |
17 |
ctggagctactgcgttagatcgaagtttctttgaagagaaagagtttgttgttgaagtgactgcaaattactctctcatggttcagatagatgggttcaa |
116 |
Q |
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| T |
4642465 |
ctggagctactgcgttagatcgaagtttctttgaagagaaagagtttgttgttgaagtgactgcaaattactctctcattgttcagttagatgggttcaa |
4642564 |
T |
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| Q |
117 |
ggaattgttgccttctatctgcaattctacttcaagtgaggttacctactattcgctttcccacattttgtttttataaatacttgtcccattgcaaatt |
216 |
Q |
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| T |
4642565 |
ggaattgttgccttctatctgcaattctacttcaagtgaggttacctactattcgctttcccacattttgtttttataaatacttgtcccattgcaaatt |
4642664 |
T |
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| Q |
217 |
tgcatttattaatttgaacgacgaatttgatgggttgagaatagtttatagactattcattatagttttata |
288 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
4642665 |
tgcatttattaatttgaaccacgaatttgatgggttgagaatagtttatagactatttattatagttttata |
4642736 |
T |
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