View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18175_high_7 (Length: 280)
Name: NF18175_high_7
Description: NF18175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18175_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 1853650 - 1853913
Alignment:
| Q |
1 |
caatatcactatgcaaataggcaacattccaattcatggccaatgcaagaaagttttgtgattccggacggagacgaaccacctcctaatatggaaacaa |
100 |
Q |
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|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1853650 |
caatatcactatgcaaatagacaacattctaattcatggccaatgcaagaaagttttgtgattccggacggagacgaaccacctcctaatatggaaacaa |
1853749 |
T |
|
| Q |
101 |
aaacaccttcacaaaggaaaacatatccttacacaaacaaagaattggaaatgttggaaaaaacaagagataaaggtttctatgaaacaaatattttccc |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
1853750 |
aaacacctacacaaaggaaaacatatccttacacaaacaaagaattggaaatgttggaaaaaacaagagataacggtttctatgaaacaaatattttccc |
1853849 |
T |
|
| Q |
201 |
tccgcctgtgccgataaatagacaaacagaaagtacaatttcaaagcacaatcgcgcatacttg |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
1853850 |
tccgcctgtgccgataaatagacaaacagaaagtacaatttcaaagcacaatcgtgcatacttg |
1853913 |
T |
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