View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18176_high_33 (Length: 227)
Name: NF18176_high_33
Description: NF18176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18176_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 42453767 - 42453935
Alignment:
| Q |
17 |
cacagatgggtgagtttgctgctacaatggagagactgcagtctcttttgagtttccaggattcaacagctacaatgttagttatgatttcgtgtctgat |
116 |
Q |
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| T |
42453767 |
cacagatgggtgagtttgctgctacaatggagagactgcagtctcttttgagtttccaggattcaacagctacaatgttagttatgatttcgtgtctgat |
42453866 |
T |
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| Q |
117 |
aatagggattgtggctttggctgttcctttccgatatcttgtctttgtttggtttctttattttctaag |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42453867 |
aatagggattgtggctttggctgttcctttccgatatcttgtctttgtttggtttctttattttctaag |
42453935 |
T |
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