View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18177_high_31 (Length: 231)

Name: NF18177_high_31
Description: NF18177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18177_high_31
NF18177_high_31
[»] chr6 (26 HSPs)
chr6 (5-225)||(5102448-5102668)
chr6 (1-225)||(5128251-5128475)
chr6 (1-222)||(5096731-5096952)
chr6 (11-225)||(5370604-5370818)
chr6 (1-225)||(5066528-5066752)
chr6 (1-225)||(5425933-5426157)
chr6 (1-225)||(5157462-5157686)
chr6 (1-225)||(5354448-5354672)
chr6 (1-179)||(5344884-5345062)
chr6 (1-179)||(5176762-5176940)
chr6 (1-208)||(5181778-5181985)
chr6 (1-187)||(5073780-5073966)
chr6 (1-179)||(5278589-5278767)
chr6 (1-225)||(5350417-5350635)
chr6 (1-179)||(5690039-5690217)
chr6 (58-179)||(5243793-5243914)
chr6 (1-184)||(5447610-5447793)
chr6 (5-186)||(5434062-5434243)
chr6 (1-224)||(5383349-5383572)
chr6 (155-225)||(5137500-5137570)
chr6 (1-190)||(5284258-5284447)
chr6 (8-225)||(5396980-5397197)
chr6 (1-156)||(5281323-5281478)
chr6 (1-156)||(5179564-5179719)
chr6 (1-96)||(5257297-5257392)
chr6 (1-64)||(5447180-5447243)
[»] chr7 (2 HSPs)
chr7 (1-225)||(36213663-36213887)
chr7 (57-181)||(18935465-18935589)
[»] chr4 (16 HSPs)
chr4 (1-193)||(4123805-4123997)
chr4 (1-181)||(4344669-4344849)
chr4 (1-176)||(4320502-4320677)
chr4 (1-184)||(4335368-4335551)
chr4 (1-181)||(4361100-4361280)
chr4 (3-117)||(4133367-4133481)
chr4 (50-184)||(6498401-6498535)
chr4 (50-209)||(6651139-6651298)
chr4 (50-184)||(6545323-6545457)
chr4 (50-184)||(6588071-6588205)
chr4 (50-184)||(6815542-6815676)
chr4 (50-183)||(6753032-6753165)
chr4 (48-127)||(7885323-7885402)
chr4 (50-147)||(6621419-6621516)
chr4 (50-184)||(6728478-6728612)
chr4 (64-141)||(6822777-6822854)
[»] chr5 (5 HSPs)
chr5 (2-209)||(8877633-8877840)
chr5 (64-177)||(20838718-20838831)
chr5 (86-175)||(15803019-15803108)
chr5 (64-177)||(20812363-20812476)
chr5 (89-177)||(12599054-12599142)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-224)||(8735-8958)
[»] chr3 (6 HSPs)
chr3 (116-187)||(47986744-47986815)
chr3 (116-187)||(47996031-47996102)
chr3 (116-187)||(48005318-48005389)
chr3 (116-187)||(48014603-48014674)
chr3 (65-179)||(32411083-32411197)
chr3 (86-179)||(6905806-6905899)
[»] chr8 (10 HSPs)
chr8 (65-177)||(3262629-3262740)
chr8 (64-178)||(3286516-3286630)
chr8 (86-179)||(3391536-3391629)
chr8 (88-176)||(3325003-3325091)
chr8 (86-179)||(3364277-3364370)
chr8 (64-177)||(31175933-31176046)
chr8 (86-176)||(3314966-3315056)
chr8 (102-179)||(3407323-3407400)
chr8 (73-179)||(3267198-3267304)
chr8 (86-177)||(3398522-3398613)
[»] chr2 (2 HSPs)
chr2 (1-179)||(22584094-22584272)
chr2 (88-150)||(14766976-14767038)
[»] scaffold0813 (1 HSPs)
scaffold0813 (50-209)||(4676-4835)
[»] scaffold0286 (1 HSPs)
scaffold0286 (50-147)||(6731-6828)
[»] scaffold0552 (1 HSPs)
scaffold0552 (50-184)||(8160-8294)
[»] scaffold0468 (1 HSPs)
scaffold0468 (86-179)||(6146-6239)


Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 5102668 - 5102448
Alignment:
Q  5 gacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatata 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5102668 gacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatata 5102569  T
Q  105 tctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttcaaac 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5102568 tctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttggatgtcaccaacaaataatcttccacccctatttcaaac 5102469  T
Q  205 atctaatatcatgtcatctct 225  Q
    |||||||||||||||||||||    
T  5102468 atctaatatcatgtcatctct 5102448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5128475 - 5128251
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||| || ||| ||||||||||| |||||||||||||||||||||    
T  5128475 agaggacttggaacaaatggaatcattaacaactctgcttgcaaataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattgga 5128376  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||||||||| || ||| |||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  5128375 tatatctctctgtgcggccatgaaggattttcaagtgatgtgtttccatctatcatctggtcttggatgtcaccaacaaatgatctcccacccctatttc 5128276  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    |||||||||||||||||||||||||    
T  5128275 aaacatctaatatcatgtcatctct 5128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 5096731 - 5096952
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | |||||||||||||||||||||| ||| || ||||| ||||||| ||||| || ||| ||||||||||| |||||||||||||||||||||    
T  5096731 agaggacatagaacaaatggaatcattaaccattctgcttgcaaataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattgga 5096830  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    || || |||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||| || ||||| |||    
T  5096831 tacatttctctatgtggccatgaaggattttcacgtgatgtgtttccgtctatcatctggtcttggttgtcaccaacaaataatctctcatccctagttc 5096930  T
Q  201 aaacatctaatatcatgtcatc 222  Q
    ||||||||||| ||||||||||    
T  5096931 aaacatctaatgtcatgtcatc 5096952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 5370604 - 5370818
Alignment:
Q  11 gaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctc 110  Q
    ||||| |||||||||||||||||||| || ||||| ||||||||||||| ||  || ||||||||||| ||| ||||||||||||||||||| || ||      
T  5370604 gaacagatggaatcattaaccactctgcttgcaaataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacatttcat 5370703  T
Q  111 tatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttcaaacatctaa 210  Q
    | |||||| ||| |||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||    
T  5370704 tgtgtggccatgtaggattttcacatgatgtttttccatctatcatttggtcttggatgtcaccaacaaattatctcccacccctatttcaaacatgtaa 5370803  T
Q  211 tatcatgtcatctct 225  Q
    ||| |||||||||||    
T  5370804 tatgatgtcatctct 5370818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5066752 - 5066528
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | |||||||||||||| ||||||||||| || ||| | || |||||||||| || | | ||||||||||| |||||||||||||||||||||    
T  5066752 agaggacatagaacaaatggaatctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattgga 5066653  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    || |||||| | || |||||||||||| | || | ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||    
T  5066652 tacatctctttgtgcggctatgaaggattctcgcgtgatgtgtttccatctatcattttgtcttggatgtcaccaacaaataatctcccatccctatttc 5066553  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    ||||||||| ||||||| |||||||    
T  5066552 aaacatctactatcatgccatctct 5066528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 5425933 - 5426157
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | |||||||||||||| |||||||||||  | ||| | || |||||||||| || ||| |||||||||||||||| |||| |||||||||||    
T  5425933 agaggacatagaacaaatggaatctttaaccactctgattgcacataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattgga 5426032  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    || |||||| | || |||||||||||| |||||| ||||||||||||| | ||||| ||||||| ||||||||||||||||||||||||| ||| |||||    
T  5426033 tacatctctttgtgcggctatgaaggattttcacgtgatgtgtttccagcgatcatttggtcttggatgtcaccaacaaataatctcccatccccatttc 5426132  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    |||||||| ||||||||||||||||    
T  5426133 aaacatctgatatcatgtcatctct 5426157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5157686 - 5157462
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | ||||| |||||||| ||||||||||| || ||| || |||||||||||| || ||| ||||||||||| |||||||||||||||||||||    
T  5157686 agaggacatagaacagatggaatctttaaccactctgcttgcacacgacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattgga 5157587  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    || |||||| |  | |||||||||||| |||| | ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | | |||||    
T  5157586 tacatctctttgggcggctatgaaggattttctcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctcccatctccatttc 5157487  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    ||||||||  |  ||||||||||||    
T  5157486 aaacatctgctgccatgtcatctct 5157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5354672 - 5354448
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||| ||||||| |||||||| || || |||||  ||||||||||||||| ||| ||||| ||| | || || || ||||||||||||    
T  5354672 agaggacttggaacaattggaatctttaaccaccctgcttgcaaatgacactgcaataacaagagtacccttctcaatagttagttccaaaagcattgga 5354573  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||| ||| ||||||||||||||||| | |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | | | |||||    
T  5354572 tatatttctttatgtggctatgaaggattctcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctccgatctccatttc 5354473  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    ||||||||  |  ||||||||||||    
T  5354472 aaacatctgctgccatgtcatctct 5354448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 5344884 - 5345062
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||||| ||||||||| |||| ||||||| |||  | ||||| |||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||    
T  5344884 agaggacttagaacaaatgaaatctttaaccattctgatcgcaaataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattgga 5344983  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    ||||| ||||| ||||||||||||||| | ||||  ||||| |||||||||||||||||||||| ||||||||||||||    
T  5344984 tatatttctctgtgtggctatgaaggattctcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa 5345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 5176762 - 5176940
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||||| ||||||||| ||| | |||||||||||||||||||||    
T  5176762 agaggacttggaacaaatggaatctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattgga 5176861  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    || |||||| | || |||||||||||| | |||| |||| | |||||||| ||||| ||||||| ||||||||||||||    
T  5176862 tacatctctttgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 5181985 - 5181778
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||| |||||||||||| |||| ||||||||  |  | ||||| |||||||||||||||| |||||| |||||||| |||| ||| |||||||||| |    
T  5181985 agaggatttggaacaaatgaaatctttaaccacattgattgcaaataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgca 5181886  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||| ||  | ||||| ||||||||| | |||||||||||||||||| | ||||| ||||||| ||||||||| ||||||||||||||| ||| |||||    
T  5181885 tatatttccttgtgtggatatgaaggattctcacatgatgtgtttccagcgatcatttggtcttggatgtcaccgacaaataatctcccatccccatttc 5181786  T
Q  201 aaacatct 208  Q
    ||||||||    
T  5181785 aaacatct 5181778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5073966 - 5073780
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||||| ||||| |||  ||| |||||||||||  ||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  5073966 agaggacttagaacagatgacatctttaaccactctgatagcaaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattgga 5073867  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctc 187  Q
    ||||| ||| | || |||||||||||| | |||| ||||||||| ||||| ||||| ||||||| ||||||||| ||||||||||||    
T  5073866 tatatttctttgtgcggctatgaaggattctcacgtgatgtgttcccatcgatcatttggtcttggatgtcaccgacaaataatctc 5073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 5278589 - 5278767
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||||| ||||||||| ||  | |||||||||||||||||||||    
T  5278589 agaggacttggaacaaatggaatctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattgga 5278688  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    || |||||| | || |||||||||||| | |||| |||| | |||||||| ||||| ||||||| ||||||||||||||    
T  5278689 tacatctctttgtgcggctatgaaggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa 5278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 5350417 - 5350635
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | |||||||||||||| ||||||||||| || ||| | || |||||||||| || | | ||||||||||| |||||||||||||||||||||    
T  5350417 agaggacatagaacaaatggaatctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattgga 5350516  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    || |||||| | || |||||||||||| |||||| ||||||||||  |||  ||||    |||| |||||||||||||||||||| |||| ||| |||||    
T  5350517 tacatctctttgtgcggctatgaaggattttcacgtgatgtgttt--atcattcat----tcttggatgtcaccaacaaataatcacccatccccatttc 5350610  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    |||||||| | ||||||||||||||    
T  5350611 aaacatctgacatcatgtcatctct 5350635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5690217 - 5690039
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| ||||||||||| || |||||  |||||| ||||||||  |||||||||||| | ||||||||||||||||||||     
T  5690217 agaggacttggaacaaatggaatctttaaccactctgcttgcaaatgacactggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattggg 5690118  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    ||||| ||||| || ||  |||||||| | |||| |||| | |||||||||||||| ||||||| ||||||||||||||    
T  5690117 tatatttctctgtgcggacatgaaggattctcacgtgatatatttccatctatcatttggtcttggatgtcaccaacaa 5690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 5243914 - 5243793
Alignment:
Q  58 aacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatc 157  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||| ||| | ||||||||||||||| ||||||  ||||| |||||||||||||||    
T  5243914 aacaagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatgtatttccatctatcatc 5243815  T
Q  158 tggtcttagatgtcaccaacaa 179  Q
    ||||||| ||||||||||||||    
T  5243814 tggtcttggatgtcaccaacaa 5243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 5447610 - 5447793
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||| || ||| |||||||||||||||||||||| || || ||||| || |||||||||    
T  5447610 agaggacttggaacagatggaatctttaaccactctgcttgcaaataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattgga 5447709  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataat 184  Q
    ||||| ||| | || || | |||||||   || |||||||||||||||||||| ||  |||||| ||||||||||| |||||||    
T  5447710 tatatttctttgtgcggatttgaaggatcctcgcatgatgtgtttccatctattattcggtcttggatgtcaccaagaaataat 5447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 5434062 - 5434243
Alignment:
Q  5 gacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatata 104  Q
    ||||||||||| |||||||| ||||||||||| || ||||| ||||||||||||| || ||||||  |||||||  | || |||||||||||||||||||    
T  5434062 gacttggaacatatggaatctttaaccactctgcttgcaaataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatata 5434161  T
Q  105 tctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatct 186  Q
    ||||| | || || ||||||||| | ||||| ||| | ||||||| ||||||   ||||| |||||||||||||||||||||    
T  5434162 tctctttgtgcggttatgaaggattctcacacgatttatttccatttatcattcagtcttggatgtcaccaacaaataatct 5434243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 5383349 - 5383572
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | |||||||||||||| ||||| ||| | || ||| | |||||||||||||||| ||| ||| ||||| |  ||||||||||||| |||| |    
T  5383349 agaggacatagaacaaatggaatctttaactactttgcttgcagataacactgcaataacaagagttcccctttcaattttaaggtcaaaaagtattgta 5383448  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||| ||| | || ||| |||||||| | |||| ||||||||||||||| |||||   ||||| ||||||  |||||||||||||||||  ||  ||||    
T  5383449 tatatttctttgtgcggccatgaaggattctcacgtgatgtgtttccatccatcattaagtcttggatgtcctcaacaaataatctcccattccattttc 5383548  T
Q  201 aaacatctaatatcatgtcatctc 224  Q
    |||||||   ||||||||||||||    
T  5383549 aaacatcagctatcatgtcatctc 5383572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 5137570 - 5137500
Alignment:
Q  155 atctggtcttagatgtcaccaacaaataatctcccacccctatttcaaacatctaatatcatgtcatctct 225  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137570 atctggtcttggatgtcaccaacaaataatctcccacccctatttcaaacatctaatatcatgtcatctct 5137500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 5284447 - 5284258
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||||| ||||| |||  ||| |||||||||||  |||| || ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  5284447 agaggacttagaacagatgacatctttaaccactctgatagctaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattgga 5284348  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctccca 190  Q
    |||||  || | || || ||||| |||||||||   |||||||||||||  || || | ||| | ||||||| |||||||||||||||||    
T  5284347 tatattgctttgtgcggttatgagggactttcaagcgatgtgtttccattaataattttgtcatggatgtcagcaacaaataatctccca 5284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 5396980 - 5397197
Alignment:
Q  8 ttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatct 107  Q
    |||||||| |||||||| ||||||||  |  | ||||| ||||||||||||| || |||||| |||||| |  |||||| |||||||||||||| |||||    
T  5396980 ttggaacagatggaatctttaaccaccttggttgcaaataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatct 5397079  T
Q  108 ctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttcaaacatc 207  Q
    || | || || ||||||||| |||||  ||| ||||||||| ||||||| | ||||| |||||||||||||| ||| ||||||   | ||||||||||||    
T  5397080 ctttgtgcggatatgaaggattttcatgtgaagtgtttccagctatcatttcgtcttggatgtcaccaacaattaacctcccatttccatttcaaacatc 5397179  T
Q  208 taatatcatgtcatctct 225  Q
    |  |  ||||||||||||    
T  5397180 tgctgccatgtcatctct 5397197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5281323 - 5281478
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| ||||| || ||  | || ||  ||||||||||||||| ||| |||||| |||| | |||||  |||| |||||||    
T  5281323 agaggacttggaacaaatggaatccttaacgaccctgattgctaatgacactgcaataacaagagttccctttgcagtaggaaggttgaaaaacattgga 5281422  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcat 156  Q
    ||||| ||| | || |||||| ||||| | |||| ||||||  |||||| ||||||    
T  5281423 tatatttctttctgcggctataaaggattctcacgtgatgtagttccatatatcat 5281478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5179564 - 5179719
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||||||||| |||||||||| ||||| || ||  | || ||  ||||||||||||| | ||| |||||| |||| | |||||  |||| |||||||    
T  5179564 agaggacttggaagaaatggaatccttaacgaccctgattgctaatgacactgcaataactagagttccctttgcagtaggaaggttgaaaaacattgga 5179663  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcat 156  Q
    ||||| ||| | || |||||| ||||| | |||| ||||||  |||||| ||||||    
T  5179664 tatatttctttctgcggctataaaggattctcacgtgatgtagttccatatatcat 5179719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 5257392 - 5257297
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcat 96  Q
    ||||||||| ||||| |||  ||| |||||||||||  | ||||| |||||||||||||||| |||||| || |||||  |||| |||||||||||    
T  5257392 agaggacttagaacagatgacatctttaaccactctaattgcaaataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcat 5257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5447180 - 5447243
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaaca 64  Q
    ||||||||| ||  |||||||||| |||||||||||||| ||||| |||||| |||||||||||    
T  5447180 agaggacttcgagaaaatggaatctttaaccactcttcttgcaaataacacttcaataacaaca 5447243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36213887 - 36213663
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| ||||||| |||||||| ||||||||  |  | ||||| |||||||||||||||| |||||| |||||||| ||||| || |||||||| |      
T  36213887 agaggacatggaacagatggaatctttaaccaccttgattgcaaataacactgcaataacaagagtgccattttcagtagtaagatctaaaagcatcgct 36213788  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||| ||| | || |||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||   || |||||    
T  36213787 tatatatctttgtgcggctatgaaggattctcacatgatgtgtttccatctatcatttggtcttggatgtcaccaacaaatgttctcccgttccgatttc 36213688  T
Q  201 aaacatctaatatcatgtcatctct 225  Q
    ||||||||| |||||||||||||||    
T  36213687 aaacatctactatcatgtcatctct 36213663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 18935465 - 18935589
Alignment:
Q  57 taacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcat 156  Q
    |||||| |||||||||| |||| ||||| |||||||||||||||| ||| || || ||||| | ||||||| |  ||| | |||||||||| || || ||    
T  18935465 taacaagagtgccctttgcagtagtaagatcaaaaagcattggatttatttcactgtgtggatttgaaggattagcacgtaatgtgtttccttcaattat 18935564  T
Q  157 ctggtcttagatgtcaccaacaaat 181  Q
       ||||| |||||| |||||||||    
T  18935565 tcagtcttggatgtctccaacaaat 18935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4123997 - 4123805
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||| ||||||||||||||||| |||||||||||  | ||||| || ||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  4123997 agaggagttggaacaaatggaatctttaaccactctgattgcaaataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattgga 4123898  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccaccc 193  Q
    | ||| ||||| ||||| ||||||||| | || | |||||||||||| |||||||| | ||||| ||||| ||||||||||||||||||||||    
T  4123897 tttatttctctgtgtggatatgaaggattctctcgtgatgtgtttccttctatcatttcgtcttggatgttaccaacaaataatctcccaccc 4123805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 4344669 - 4344849
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| |||||||||||  | ||||| |||||||| ||||||| ||| ||||||||||| |||||||||||| ||||||||    
T  4344669 agaggacttggaacaaatggaatctttaaccactctgattgcaaataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattgga 4344768  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaat 181  Q
    | ||| ||| | ||||| ||||||||| | |||| |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  4344769 tttatttctttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaacaaat 4344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 4320677 - 4320502
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| |||||||| ||  | ||||| || ||||  ||||||| ||| ||||||||| | |||||||||||||||||||||    
T  4320677 agaggacttggaacaaatggaatctttaaccaccctgattgcaaataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattgga 4320578  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaa 176  Q
    | ||| ||||| ||||| ||||||||| | |||| |||||||||||| |||||||| ||||||| |||||||||||    
T  4320577 tttatttctctgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaa 4320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 4335368 - 4335551
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| |||||||||||  | ||| | |||||||  ||||||| ||||||||||||||| |||| |||||||||||||||     
T  4335368 agaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggc 4335467  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataat 184  Q
    ||||||||| | ||||| ||||||||| | || | |||||||||||| ||||| || ||||||| ||||  |||||||||||||    
T  4335468 tatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccttctataatttggtcttggatggtaccaacaaataat 4335551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 4361100 - 4361280
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| |||||||||||  | ||||| |||||||  ||||||| ||| ||||||||| | ||||| |||||| ||||||||    
T  4361100 agaggacttggaacaaatggaatctttaaccactctgattgcaaataacactggtataacaaaagtacccttttcaattgtaagatcaaaacgcattgga 4361199  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaat 181  Q
    | ||| ||| | ||||| ||||||||| | |||| |||||||||||| |||||||| | ||||| ||||||||||||||||    
T  4361200 tttatttctttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgtcaccaacaaat 4361280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 4133481 - 4133367
Alignment:
Q  3 aggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggata 102  Q
    ||||||||||||||||||| || |||||||||||  | |   | |||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||    
T  4133481 aggacttggaacaaatggagtctttaaccactctgattgtggataacactgcaataacaaaagtgcccttttcagtcgcaaggtcaaaaagcattgaata 4133382  T
Q  103 tatctctctatgtgg 117  Q
    ||| ||||| |||||    
T  4133381 tatttctctttgtgg 4133367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 6498535 - 6498401
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| ||| ||||||||| | ||||| ||||||||||||||||| || ||| || |||| | | ||||| |||||| |||||| ||||| |    
T  6498535 actgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttctttaggtggatttaaaggattttcacgtgatgtatttcctt 6498436  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || ||||  |||||| |||||||||| ||||||||    
T  6498435 ctctcattcggtcttggatgtcaccatcaaataat 6498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 6651139 - 6651298
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| |||||| |||||| | ||||| | || || |||||||||||| ||||||||||||| ||||||| ||||||  ||||| ||||| |    
T  6651139 actgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtatttcctt 6651238  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttcaaacatcta 209  Q
     | || |  |||||| |||||||||| ||| |||| |  || ||||| ||||||||||||    
T  6651239 ttctcgttcggtcttggatgtcaccatcaactaatgtaacatccctagttcaaacatcta 6651298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 6545457 - 6545323
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| ||||||||||||| | || || |  ||||||||||||||||| ||| |  |||||| ||||||| |||||| |||||| || || |    
T  6545457 actgctataacaaaagtgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattccctt 6545358  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || ||||  |||||| | |||||||| ||||||||    
T  6545357 ctctcattcggtcttggctgtcaccatcaaataat 6545323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 6588205 - 6588071
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| || |||| |||||| |||||| | ||||||   ||||||||||||||||| ||| | ||||||| ||||||| |||||| |||||| || || |    
T  6588205 actgccatcacaaaagtgccattttcaatagtaaggatgaaaagcattggatatatttctttttgtggctttgaaggattttcacgtgatgtattccctt 6588106  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || ||||  |||||| |||||| ||| ||||||||    
T  6588105 ctctcattcggtcttggatgtcgccatcaaataat 6588071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 6815542 - 6815676
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| |||| || |||||| |||||||||||||| |  ||||||||||||||||| ||| || |||||| ||||||| || ||| |||||| ||| | |    
T  6815542 actgctataaaaaaagtgccattttcagtggtaagattgaaaagcattggatatatttctttaggtggctttgaaggatttacacgtgatgtattttctt 6815641  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || || |  | |||| |||||||||| ||||||||    
T  6815642 ctctcgttcgctcttggatgtcaccatcaaataat 6815676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 6753032 - 6753165
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| ||||||||||||| | ||||| |  ||||||||||||||||| ||| |  |||||| ||||||| |||||| |||||| || || |    
T  6753032 actgctataacaaaagtgcccttttcaatagtaagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattccctt 6753131  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataa 183  Q
    || ||||  |||||| ||| || ||| |||||||    
T  6753132 ctctcattcggtcttggatatcgccatcaaataa 6753165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 7885402 - 7885323
Alignment:
Q  48 acactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaagga 127  Q
    ||||||| || |||| |||||||||| |||| ||||| ||||||||||||| || ||| ||||||||||| ||| |||||    
T  7885402 acactgctatcacaagagtgccctttgcagtagtaagatcaaaaagcattgcatttatttctctatgtggttataaagga 7885323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 6621516 - 6621419
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttcc 147  Q
    ||||| ||||||| ||| ||||||||| | ||| | || |||| |||||||||||| ||| ||||||| | ||||||| ||||||  |||||||||||    
T  6621516 actgctataacaaaagttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatgtgtttcc 6621419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 6728478 - 6728612
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| |||||| |||||| | ||||| |  ||||| ||||||||||| ||| |  |||||| ||||||| |||||| |||||| || || |    
T  6728478 actgctataacaaaagtgccattttcaatagtaagattgaaaagtattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattccctt 6728577  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || |  | ||||||| |||||| ||| ||||||||    
T  6728578 ctcttgtttggtcttggatgtcgccatcaaataat 6728612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 6822777 - 6822854
Alignment:
Q  64 agtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgt 141  Q
    |||||| |||||| | ||||| |  ||||||||||||||||| ||| |||| |||| ||||||| |||||| ||||||    
T  6822777 agtgccattttcaatagtaagattgaaaagcattggatatatttctttatgcggctttgaaggattttcacgtgatgt 6822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 8877633 - 8877840
Alignment:
Q  2 gaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggat 101  Q
    |||||||| ||||| ||| |||| ||||||||||| || ||||| ||||||||||||| || ||| || |||||| | ||||||||||||||||||||||    
T  8877633 gaggacttagaacagatgaaatctttaaccactctgcttgcaaataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggat 8877732  T
Q  102 atatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttca 201  Q
    |||| ||| | || |||||||||||| |||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||   |  |||| ||||||    
T  8877733 atatttctttgtgcggctatgaaggattttcgcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataattaacagcccccatttca 8877832  T
Q  202 aacatcta 209  Q
    ||||||||    
T  8877833 aacatcta 8877840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 20838718 - 20838831
Alignment:
Q  64 agtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtct 163  Q
    |||||||| |||| | | ||| |||||||||||||||||||| || |||||||| ||||||||| | ||||||||||| ||||| ||| |||| ||||||    
T  20838718 agtgccctattcaatagcaagatcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatgatgtttttccttctctcatttggtct 20838817  T
Q  164 tagatgtcaccaac 177  Q
    | ||||||||||||    
T  20838818 tggatgtcaccaac 20838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 15803019 - 15803108
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcacca 175  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| | ||||||||||| ||||| ||| ||||  |||||| ||| ||||||    
T  15803019 tcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgatgtttttccttctctcattaggtcttggatatcacca 15803108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 20812363 - 20812476
Alignment:
Q  64 agtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtct 163  Q
    |||||||| |||| | | ||| ||||||||||||| |||||| || |||||||| || |||||| | |||| |||||| ||||| ||| |||| ||||||    
T  20812363 agtgccctattcaatagcaagatcaaaaagcattgcatatatatcactatgtggatacgaaggattatcacgtgatgtttttccttctctcatttggtct 20812462  T
Q  164 tagatgtcaccaac 177  Q
    | ||||||||||||    
T  20812463 tggatgtcaccaac 20812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 12599142 - 12599054
Alignment:
Q  89 aaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaac 177  Q
    ||||||||||||||||| ||  | ||||| ||||||||| | |||| |||||| ||||| ||| |||  ||||||| ||||||||||||    
T  12599142 aaaagcattggatatatatccttgtgtggatatgaaggattatcacgtgatgtttttccttctctcaattggtcttggatgtcaccaac 12599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8958 - 8735
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    ||||||| | ||||| |||||||| ||||||||||| || ||| | ||||||||| |||||| ||||||||||||| | |||||||||||||| |||| |    
T  8958 agaggacatagaacagatggaatctttaaccactctgcttgcagataacactgcattaacaagagtgcccttttcaatagtaaggtcaaaaagtattgta 8859  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttc 200  Q
    ||||| ||| | || ||| |||||||| | |||| |||||||||||||||||||||   ||||| |||||| |||||||||||||||||| |    ||||    
T  8858 tatatttctttgtgcggccatgaaggattctcacgtgatgtgtttccatctatcattaagtcttggatgtctccaacaaataatctcccatcttactttc 8759  T
Q  201 aaacatctaatatcatgtcatctc 224  Q
    ||||||||| ||||||||||||||    
T  8758 aaacatctactatcatgtcatctc 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 47986815 - 47986744
Alignment:
Q  116 ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctc 187  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  47986815 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 47986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 47996102 - 47996031
Alignment:
Q  116 ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctc 187  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  47996102 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 47996031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 48005389 - 48005318
Alignment:
Q  116 ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctc 187  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48005389 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 48005318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 48014674 - 48014603
Alignment:
Q  116 ggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaaataatctc 187  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48014674 ggctatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataatctc 48014603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 32411197 - 32411083
Alignment:
Q  65 gtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtctt 164  Q
    ||||||| |||| | ||||| || |||||||| | |||||| ||||||||||| ||||||||| | |||||||| || ||||| ||| |||| |||||||    
T  32411197 gtgccctgttcaatagtaagatcgaaaagcatcgcatatatatctctatgtggatatgaaggattatcacatgaagtatttccctctctcatttggtctt 32411098  T
Q  165 agatgtcaccaacaa 179  Q
    |||||||||||||||    
T  32411097 agatgtcaccaacaa 32411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 6905899 - 6905806
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    |||||||||||||  ||||| || ||||| || ||||||||| | |||| |||| | ||||| ||| |||| ||||||| ||||||||||||||    
T  6905899 tcaaaaagcattgtgtatatatccctatgcggatatgaaggattatcacgtgatatttttccttctctcatttggtcttggatgtcaccaacaa 6905806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 3262740 - 3262629
Alignment:
Q  65 gtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtctt 164  Q
    ||||||| |||| | ||||| |||||||||||||||||||| || |||||||| |||| |||| |||||| |||||| ||||| |||||||| |||||||    
T  3262740 gtgccctattcaatagtaagatcaaaaagcattggatatatatccctatgtggatatg-aggattttcacgtgatgtttttccctctatcatttggtctt 3262642  T
Q  165 agatgtcaccaac 177  Q
     ||||||||||||    
T  3262641 ggatgtcaccaac 3262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 3286630 - 3286516
Alignment:
Q  64 agtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtct 163  Q
    ||||||||||||| | ||||| |||||||||||  ||||||| || |||||||| ||||||||| | ||||||||||| |||| |||| ||||  |||||    
T  3286630 agtgcccttttcaattgtaagatcaaaaagcatcagatatatatccctatgtggatatgaaggattatcacatgatgtttttcaatctctcattaggtct 3286531  T
Q  164 tagatgtcaccaaca 178  Q
    | |||||||||||||    
T  3286530 tggatgtcaccaaca 3286516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 3391629 - 3391536
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | |||||| |||| ||||| ||| ||||  |||||| ||||||||||||||    
T  3391629 tcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaacaa 3391536  T

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Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 3325091 - 3325003
Alignment:
Q  88 aaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaa 176  Q
    |||||||||||||||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||||| ||||||| |||||||||||    
T  3325091 aaaaagcattggatatatatccctctgtggatatgaaggactatcacacgatgtttttccttctatcatttggtcttggatgtcaccaa 3325003  T

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Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 3364277 - 3364370
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | |||||| |||| ||||| ||| ||||  |||||| ||| ||||||||||    
T  3364277 tcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatatcaccaacaa 3364370  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 31175933 - 31176046
Alignment:
Q  64 agtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtct 163  Q
    |||||||| |||| | | ||| ||||||||||||| |||||| ||||||||||| ||||||||| | |||  ||| || ||||| ||| |||| ||||||    
T  31175933 agtgccctattcaatagcaagatcaaaaagcattgcatatatatctctatgtggatatgaaggattatcatgtgacgtttttccttctctcatttggtct 31176032  T
Q  164 tagatgtcaccaac 177  Q
    | ||||||||||||    
T  31176033 tggatgtcaccaac 31176046  T

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Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 3314966 - 3315056
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaa 176  Q
    ||||||| |||||||||||| || |||||||  ||||||||  | |||| |||||| ||||| |||||||| ||||||| |||||||||||    
T  3314966 tcaaaaaacattggatatatatccctatgtgaatatgaaggtttatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaa 3315056  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 3407400 - 3407323
Alignment:
Q  102 atatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    |||| ||||||||||| ||| ||||| | |||| |||||| ||||| |||||||| ||||||| ||||||||||||||    
T  3407400 atatatctctatgtggatatcaaggattatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaacaa 3407323  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 3267304 - 3267198
Alignment:
Q  73 ttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtca 172  Q
    |||||||||||| |  |||||||| |||||||| ||||||||||| ||||||||| | ||| | ||||| ||||  ||||| ||   ||||| |||||||    
T  3267304 ttcagtggtaagattgaaaagcatcggatatatatctctatgtggatatgaaggattatcagaagatgtttttcattctattattcagtcttggatgtca 3267205  T
Q  173 ccaacaa 179  Q
    |||||||    
T  3267204 ccaacaa 3267198  T

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Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 3398613 - 3398522
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaac 177  Q
    ||||||||||||| |||||| ||||||||||| ||| ||||| | ||   |||||| ||||| ||| |||| ||||| | ||||||||||||    
T  3398613 tcaaaaagcattgcatatatatctctatgtggatataaaggattatcgtctgatgtttttccttctctcatttggtcatggatgtcaccaac 3398522  T

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Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 22584272 - 22584094
Alignment:
Q  1 agaggacttggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattgga 100  Q
    |||||||||||||||||||||||| ||||||||||| || |||||  | |||||||||| || |||||| |||||| |  | ||||||||||  ||| |     
T  22584272 agaggacttggaacaaatggaatctttaaccactctgcttgcaaatgaaactgcaataaaaaaagtgccattttcaatatttaggtcaaaaactatttgg 22584173  T
Q  101 tatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    || || ||| | ||||||||||||||||| | |   |||||  |||||||||| || ||||||| ||||||| ||||||    
T  22584172 tacatttctttgtgtggctatgaaggactcttaagcgatgtagttccatctatgatttggtcttggatgtcatcaacaa 22584094  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 14767038 - 14766976
Alignment:
Q  88 aaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatc 150  Q
    |||||||||||||||||| || |||||||| ||||||||| | || |||||| | ||||||||    
T  14767038 aaaaagcattggatatatatccctatgtggttatgaaggattatcgcatgatatttttccatc 14766976  T

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Target: scaffold0813 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 4835 - 4676
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| ||||||| |||||| |||||| | ||||| | || || |||||||||||| ||||||||||||| ||||||| ||||||  ||||| ||||| |    
T  4835 actgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtatttcctt 4736  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataatctcccacccctatttcaaacatcta 209  Q
     | || |  |||||| |||||||||| ||| |||| |  || ||||| ||||||||||||    
T  4735 ttctcgttcggtcttggatgtcaccatcaactaatgtaacatccctagttcaaacatcta 4676  T

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Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 6731 - 6828
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttcc 147  Q
    ||||| ||||||| ||| ||||||||| | ||| | || |||| |||||||||||| ||| ||||||| | ||||||| ||||||  |||||||||||    
T  6731 actgctataacaaaagttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatgtgtttcc 6828  T

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Target: scaffold0552 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 8294 - 8160
Alignment:
Q  50 actgcaataacaacagtgcccttttcagtggtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 149  Q
    ||||| |||| || |||||| |||||||||||||| |  |||| |||||||||||| ||| || |||||| ||||||| || ||| || ||| ||| | |    
T  8294 actgctataaaaaaagtgccattttcagtggtaagattgaaaaccattggatatatttctttaggtggctttgaaggatttacacgtgctgtattttctt 8195  T
Q  150 ctatcatctggtcttagatgtcaccaacaaataat 184  Q
    || || |  | |||| |||||||||| ||||||||    
T  8194 ctctcgttcgctcttggatgtcaccatcaaataat 8160  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 6239 - 6146
Alignment:
Q  86 tcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttagatgtcaccaacaa 179  Q
    |||||||||||||  ||||| || ||||| || ||||||||| | |||| |||||| ||||| ||  | || ||||||| ||||||||||||||    
T  6239 tcaaaaagcattgtgtatatatccctatgcggatatgaaggattatcacgtgatgtttttccttcccttatttggtcttggatgtcaccaacaa 6146  T

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