View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18177_high_7 (Length: 419)

Name: NF18177_high_7
Description: NF18177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18177_high_7
NF18177_high_7
[»] chr6 (18 HSPs)
chr6 (24-354)||(14623036-14623365)
chr6 (24-352)||(14589378-14589705)
chr6 (196-322)||(33123017-33123143)
chr6 (200-323)||(26388201-26388324)
chr6 (219-323)||(29938623-29938726)
chr6 (201-319)||(7632781-7632899)
chr6 (204-322)||(3989524-3989642)
chr6 (30-172)||(12846939-12847080)
chr6 (201-316)||(3989524-3989639)
chr6 (196-324)||(7632776-7632904)
chr6 (201-319)||(14623212-14623330)
chr6 (201-319)||(33123022-33123140)
chr6 (201-310)||(29938627-29938735)
chr6 (275-335)||(10405046-10405106)
chr6 (196-319)||(26388202-26388325)
chr6 (201-319)||(14589554-14589672)
chr6 (275-324)||(23767941-23767990)
chr6 (279-323)||(30629598-30629642)
[»] chr4 (37 HSPs)
chr4 (24-181)||(29954955-29955111)
chr4 (196-323)||(22720512-22720639)
chr4 (24-183)||(51369340-51369498)
chr4 (196-323)||(52673604-52673731)
chr4 (196-323)||(22720513-22720640)
chr4 (196-323)||(22768150-22768277)
chr4 (196-336)||(52673592-52673732)
chr4 (211-321)||(41622106-41622216)
chr4 (204-323)||(22768151-22768270)
chr4 (196-323)||(49083049-49083171)
chr4 (196-253)||(2198054-2198111)
chr4 (275-323)||(2198055-2198103)
chr4 (196-323)||(44626168-44626293)
chr4 (196-323)||(49083048-49083170)
chr4 (211-324)||(6464885-6464998)
chr4 (275-323)||(22923666-22923714)
chr4 (275-323)||(22928319-22928367)
chr4 (275-323)||(22984598-22984646)
chr4 (275-323)||(22998186-22998234)
chr4 (221-317)||(41622128-41622224)
chr4 (275-324)||(15794769-15794819)
chr4 (275-324)||(2198121-2198169)
chr4 (196-249)||(22923665-22923718)
chr4 (196-249)||(22928318-22928371)
chr4 (196-249)||(22984597-22984650)
chr4 (196-249)||(22998185-22998238)
chr4 (207-248)||(2198118-2198159)
chr4 (286-323)||(5281231-5281268)
chr4 (197-250)||(6464886-6464939)
chr4 (275-324)||(39396827-39396876)
chr4 (280-329)||(39897110-39897159)
chr4 (282-323)||(44156092-44156133)
chr4 (286-335)||(50485791-50485840)
chr4 (196-249)||(52299084-52299136)
chr4 (276-324)||(6131436-6131484)
chr4 (201-268)||(15794774-15794842)
chr4 (280-336)||(22020110-22020166)
[»] chr2 (15 HSPs)
chr2 (24-180)||(20493090-20493245)
chr2 (196-291)||(8996792-8996887)
chr2 (221-324)||(8717540-8717643)
chr2 (194-323)||(20218550-20218679)
chr2 (275-323)||(10495729-10495777)
chr2 (275-323)||(43100756-43100804)
chr2 (182-249)||(10495725-10495792)
chr2 (262-324)||(8996729-8996791)
chr2 (229-323)||(8996792-8996886)
chr2 (24-117)||(1355419-1355511)
chr2 (199-323)||(13953774-13953899)
chr2 (199-323)||(14094981-14095106)
chr2 (231-306)||(39792136-39792211)
chr2 (196-242)||(43100755-43100801)
chr2 (201-249)||(8996734-8996782)
[»] chr3 (13 HSPs)
chr3 (24-163)||(11532268-11532406)
chr3 (201-323)||(50334932-50335053)
chr3 (196-301)||(35239682-35239787)
chr3 (219-321)||(29497369-29497471)
chr3 (196-319)||(50334932-50335054)
chr3 (205-303)||(32711221-32711319)
chr3 (201-301)||(29497371-29497471)
chr3 (219-323)||(35239682-35239786)
chr3 (197-328)||(53711868-53711998)
chr3 (286-320)||(42912351-42912385)
chr3 (201-234)||(42912352-42912385)
chr3 (275-324)||(53711867-53711916)
chr3 (221-301)||(48593175-48593255)
[»] chr5 (18 HSPs)
chr5 (196-322)||(26221030-26221156)
chr5 (200-323)||(21032539-21032662)
chr5 (203-323)||(42364233-42364353)
chr5 (201-324)||(29486504-29486627)
chr5 (221-323)||(5240233-5240335)
chr5 (194-301)||(21032536-21032643)
chr5 (201-324)||(29486509-29486632)
chr5 (196-324)||(7604194-7604323)
chr5 (196-323)||(42364227-42364354)
chr5 (204-319)||(26221035-26221150)
chr5 (196-299)||(5240232-5240335)
chr5 (275-321)||(892560-892606)
chr5 (201-249)||(892562-892610)
chr5 (275-319)||(6834041-6834085)
chr5 (195-249)||(6834035-6834089)
chr5 (286-324)||(35969225-35969263)
chr5 (280-324)||(1098634-1098678)
chr5 (280-324)||(36864512-36864556)
[»] chr8 (13 HSPs)
chr8 (196-323)||(6197832-6197959)
chr8 (196-309)||(13325116-13325225)
chr8 (196-319)||(6197837-6197960)
chr8 (197-323)||(27938998-27939124)
chr8 (201-324)||(11322569-11322690)
chr8 (211-319)||(13325116-13325220)
chr8 (217-324)||(11322589-11322695)
chr8 (207-249)||(158444-158486)
chr8 (275-309)||(158448-158482)
chr8 (275-321)||(1214021-1214067)
chr8 (196-249)||(43140629-43140681)
chr8 (201-249)||(28205809-28205857)
chr8 (275-323)||(43140553-43140601)
[»] chr7 (25 HSPs)
chr7 (196-319)||(4132392-4132516)
chr7 (196-319)||(4132397-4132521)
chr7 (201-338)||(38646177-38646315)
chr7 (196-338)||(41115556-41115698)
chr7 (275-323)||(26982771-26982819)
chr7 (196-249)||(26982770-26982823)
chr7 (195-252)||(43250417-43250474)
chr7 (275-336)||(45578005-45578066)
chr7 (275-323)||(43250424-43250472)
chr7 (275-321)||(38646175-38646221)
chr7 (281-323)||(43250376-43250418)
chr7 (275-323)||(21857076-21857124)
chr7 (195-251)||(45578016-45578072)
chr7 (196-239)||(43250375-43250418)
chr7 (196-242)||(38646255-38646301)
chr7 (196-249)||(21587841-21587894)
chr7 (196-249)||(21857075-21857128)
chr7 (275-324)||(24155642-24155691)
chr7 (196-249)||(34840620-34840673)
chr7 (201-318)||(41115562-41115679)
chr7 (275-323)||(21587842-21587890)
chr7 (275-323)||(21857171-21857219)
chr7 (280-324)||(30457820-30457864)
chr7 (204-264)||(34703509-34703569)
chr7 (204-264)||(40416972-40417032)
[»] chr1 (13 HSPs)
chr1 (196-336)||(8352129-8352269)
chr1 (196-319)||(8352141-8352264)
chr1 (185-315)||(26468289-26468419)
chr1 (202-316)||(31635757-31635871)
chr1 (201-288)||(14773765-14773852)
chr1 (204-323)||(31635752-31635871)
chr1 (201-319)||(43731130-43731248)
chr1 (205-323)||(26468301-26468419)
chr1 (199-321)||(43731128-43731250)
chr1 (255-323)||(30800186-30800254)
chr1 (221-299)||(897042-897120)
chr1 (275-324)||(39940571-39940620)
chr1 (280-324)||(10256787-10256831)
[»] scaffold0155 (1 HSPs)
scaffold0155 (196-234)||(33971-34009)


Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 14623036 - 14623365
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14623036 gttggtaatagtggatgaggaaggaagtatttacagg-aacaatgccaaagacatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 14623134  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactacattcagtcattattataagcaaaacttcacttt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14623135 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaaacatatttcatatacttcattcggtcattattataagcaaaacttcacttt 14623234  T
Q  224 tcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14623235 tcagatacattgaataattcatgtatctaatctttattatagactgaacagattaatttttcaatgtatctaaaaagtgaagttttatttataatagtga 14623334  T
Q  324 tgagagtgagtatatgtttccctttcaacag 354  Q
    |||||| ||||||||||||||||||||||||    
T  14623335 tgagagggagtatatgtttccctttcaacag 14623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 24 - 352
Target Start/End: Original strand, 14589378 - 14589705
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14589378 gttggtaatagtggatgaggaaggaagtatttacagg-aacaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 14589476  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactacattcagtcattattataagcaaaacttcacttt 223  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||    
T  14589477 aaacttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcatatactcccttcggtcattattataaacaaaacttcacttt 14589576  T
Q  224 tcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  14589577 tcagatacattgaataattcatgtatctagtctttattatagaccggacagattgattattcaatgtatctaaaaagtaaagttttatttataatagtga 14589676  T
Q  324 tgagagtgagtatatgtttccctttcaac 352  Q
    |||||| ||||||| ||||||||||||||    
T  14589677 tgagagggagtataggtttccctttcaac 14589705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 33123017 - 33123143
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||| |||||| ||| |||| ||||||||| || |  ||||||||| | ||||||||    
T  33123017 gtcattattataaacaaaacttcactttttaaatacattgaataattaatgtatctagtcttttttatagacttgatacgttaattattaagtgtatcta 33123116  T
Q  296 aaaagtgaagttttacttataatagtg 322  Q
    |||||| || |||| ||||||||||||    
T  33123117 aaaagtaaacttttgcttataatagtg 33123143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 323
Target Start/End: Original strand, 26388201 - 26388324
Alignment:
Q  200 ttattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 299  Q
    ||||||||| |||||||  |||||| ||||| ||||||||||| |||||| ||  ||||||||||||||| | | |||||||||||||| ||| ||||||    
T  26388201 ttattataaacaaaactctactttttagatatattgaataattaatgtatctaatctttattatagactgaatacattaattattcaatatatataaaaa 26388300  T
Q  300 gtgaagttttacttataatagtga 323  Q
    ||| |||||| |||||||||||||    
T  26388301 gtggagtttttcttataatagtga 26388324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 323
Target Start/End: Complemental strand, 29938726 - 29938623
Alignment:
Q  219 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 318  Q
    |||||| ||||||||||||||||| |||||| ||| ||||||| || ||| || | |||||||||| ||||||||||||||||||| |||||||||||||    
T  29938726 actttttagatacattgaataattaatgtatctagtctttattgtatactagatacattaattatt-aatgtatctaaaaagtgaaattttacttataat 29938628  T
Q  319 agtga 323  Q
    |||||    
T  29938627 agtga 29938623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 7632781 - 7632899
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||| ||||||||||||||  |  |||||| ||||||  |||||| ||| ||||||||||||| ||| | |||||||||||| |||||||||||||    
T  7632781 tattataaacaaaacttcactttctaactacattcaataatcaatgtatctagtctttattatagaccggatacattaattattcagtgtatctaaaaag 7632880  T
Q  301 tgaagttttacttataata 319  Q
    | |||||||  ||||||||    
T  7632881 ttaagttttgtttataata 7632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 322
Target Start/End: Original strand, 3989524 - 3989642
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 303  Q
    ||||||||||||||||||||| | ||||||  ||||||  |||| | ||| |||||||||||||| || | || ||||||||||||||||| || ||| |    
T  3989524 tataagcaaaacttcactttttaaatacataaaataatcaatgtttctagtctttattatagactagatacatcaattattcaatgtatcttaatagtta 3989623  T
Q  304 agttttacttataatagtg 322  Q
    ||||||  |||||||||||    
T  3989624 agttttgattataatagtg 3989642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 12846939 - 12847080
Alignment:
Q  30 aatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaaaaattt 129  Q
    |||| ||||||  ||||||| |||||||||| || ||||| ||||| ||||| ||| || | ||||||||||| ||||||||  |||||||| || ||||    
T  12846939 aataatggatgccgaaggaattatttacagg-aacaatgcaaaagagatgggcaagattttcagttcaaaagaacttcacaaaaaatacattgaagattt 12847037  T
Q  130 cattgccactcttcaaaagtttagagttcattccgacaattaa 172  Q
    ||||||  |||||||||||| ||| |||||||| || ||||||    
T  12847038 cattgctgctcttcaaaagtatagggttcattctgagaattaa 12847080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 3989639 - 3989524
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||| |||||||| ||| || ||||||||||||||||| |||||| ||| || || || ||||| || | ||| ||||||  |||||| |||||||    
T  3989639 tattataatcaaaacttaactattaagatacattgaataattgatgtatctagtctataataaagactagaaacattgattattttatgtatttaaaaag 3989540  T
Q  301 tgaagttttacttata 316  Q
    ||||||||| ||||||    
T  3989539 tgaagttttgcttata 3989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 7632904 - 7632776
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||||||| ||||||   | || || || ||||| || | ||| |||||| ||||||  ||    
T  7632904 gtcattattataaacaaaacttaactttttagatacactgaataattaatgtatccggtctataataaagactagatacattgattattgaatgtagtta 7632805  T
Q  296 aaaagtgaagttttacttataatagtgat 324  Q
     |||||||||||||  |||||||||||||    
T  7632804 gaaagtgaagttttgtttataatagtgat 7632776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 14623330 - 14623212
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    ||||||||  |||||||||||||| |||||||||||| |||| || | |  || || || || ||| | || | || ||||||||||||||||| |||||    
T  14623330 tattataaataaaacttcactttttagatacattgaaaaattaatctgttcagtctataataaagattagatacatgaattattcaatgtatctgaaaag 14623231  T
Q  301 tgaagttttacttataata 319  Q
    ||||||||| |||||||||    
T  14623230 tgaagttttgcttataata 14623212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 33123140 - 33123022
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||||||||| || |||||| ||||||| | ||||||| | ||||  || || ||  | ||||| || | |||||||||||||||||| |||||||    
T  33123140 tattataagcaaaagtttactttttagatacacttaataattaacgtatcaagtctataaaaaagactagatacattaattattcaatgtatttaaaaag 33123041  T
Q  301 tgaagttttacttataata 319  Q
    |||||||||  ||||||||    
T  33123040 tgaagttttgtttataata 33123022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 29938627 - 29938735
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    ||||||||| |||| ||||||||| ||||||||| ||||||| |||||| |||  |  | || ||||| || | ||||||||||||||||||||||||||    
T  29938627 tattataagtaaaatttcactttttagatacatt-aataattaatgtatctagtatacaataaagactagatacattaattattcaatgtatctaaaaag 29938725  T
Q  301 tgaagtttta 310  Q
    |  |||||||    
T  29938726 tagagtttta 29938735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 10405106 - 10405046
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagta 335  Q
    |||||||||| ||||||| |||||| |||||||||| ||||||||||||| |||| |||||    
T  10405106 attaattatttaatgtatttaaaaaatgaagttttatttataatagtgatcagagagagta 10405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 26388325 - 26388202
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| ||||||||| |||||| ||||||| | ||| ||||||||||| ||||||  || || || || ||| | || | |||||||||||||| ||||||    
T  26388325 gtcactattataagaaaaactccactttttatatatattgaataattaatgtattcagtctataataaagattagatacattaattattcaatatatcta 26388226  T
Q  296 aaaagtgaagttttacttataata 319  Q
    ||||||  ||||||  ||||||||    
T  26388225 aaaagtagagttttgtttataata 26388202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 14589672 - 14589554
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    ||||||||  ||||||| |||||| ||||||||||||||||  || | |   | || || || ||||| || | || ||||||||||||||||| |||||    
T  14589672 tattataaataaaactttactttttagatacattgaataatcaatctgtccggtctataataaagactagatacatgaattattcaatgtatctgaaaag 14589573  T
Q  301 tgaagttttacttataata 319  Q
    |||||||||  ||||||||    
T  14589572 tgaagttttgtttataata 14589554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 23767990 - 23767941
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    |||||||||| |||||||| ||||| |||| |||||||||||||| ||||    
T  23767990 attaattatttaatgtatcgaaaaactgaaattttacttataatattgat 23767941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 30629642 - 30629598
Alignment:
Q  279 attattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||| ||||||||||||||| ||||  ||||||||||||    
T  30629642 attattcaatctatctaaaaagtgaaattttgtttataatagtga 30629598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 29954955 - 29955111
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    ||||| |||||||||||||||||||||||| ||  || || ||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||    
T  29954955 gttggcaatagtggatgaggaaggaagtatgtatcgg-aataatgccaaagatatggaaaaggttttcagttcaaaagatcttcacaatgaatacattaa 29955053  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttc 181  Q
    | || |||||||  |||||||||||| |||||||| ||  | ||||||||||||||||    
T  29955054 agatgtcattgctgctcttcaaaagtatagagttcgttatgtcaattaagcatatttc 29955111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 22720512 - 22720639
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||| ||||| | ||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||||||||||||    
T  22720512 gtcactattataaacaaaattccactttttagatacattgaataattaatgtatctagtctttattatagactgcatacattaattattcaatgtatcta 22720611  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||||||| |||||| |||||||||||||    
T  22720612 aaaagtggagttttgcttataatagtga 22720639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 51369498 - 51369340
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    |||||||||||||||||||||||| || |  | || |||||||||| ||||| ||||||||  || | ||||||||||||||||||||| ||||||||||    
T  51369498 gttggtaatagtggatgaggaaggtagcacgtgca-ggaaaaatgctaaagatatgggaaaaattttcagttcaaaagatcttcacaatcaatacattaa 51369400  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatatttcat 183  Q
    | |||| || ||  |||||||||||  ||||||||||||||||| |||||||||||||||    
T  51369399 agatttaatcgctgctcttcaaaagcatagagttcattccgacagttaagcatatttcat 51369340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 52673604 - 52673731
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| ||||||||||||||||| |||||| ||||| ||||||||||| |||||| |||  ||||||||||  |||| | |||||||||||||||||||||    
T  52673604 gtcactattataagcaaaactttactttttagatatattgaataattaatgtatctagtttttattatagtatggatacattaattattcaatgtatcta 52673703  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||||||||| |||| |||||||||||||    
T  52673704 aaaagtgaaattttgcttataatagtga 52673731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 22720640 - 22720513
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||  || || || || ||||| || | |||||||||||||||||||||    
T  22720640 gtcactattataagcaaaactccactttttagatacattgaataattaatgtatgcagtctataataaagactagatacattaattattcaatgtatcta 22720541  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||||||| | ||||  ||||||||||||    
T  22720540 aaaagtggaattttgtttataatagtga 22720513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 22768150 - 22768277
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||||| ||  ||| ||||||||||||||||| |||||| ||| ||||||||||||||| |   |||||||||||||||||||||    
T  22768150 gtcactattataagcaaaactccatattttagatacattgaataattaatgtatctagtctttattatagactgcattcattaattattcaatgtatcta 22768249  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||||||| ||| ||  ||||| ||||||    
T  22768250 aaaagtgtagtgttgtttatagtagtga 22768277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 52673732 - 52673592
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||  |  || || || | ||| || | |||||||||||||| ||||||    
T  52673732 gtcactattataagcaaaatttcactttttagatacattgaataattaatgtatccatactataataaaaactagatacattaattattcaatatatcta 52673633  T
Q  296 aaaagtgaagttttacttataatagtgatgagagtgagtat 336  Q
    |||||| ||||||| ||||||||||||| | ||| ||||||    
T  52673632 aaaagtaaagttttgcttataatagtgacgggagggagtat 52673592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 41622216 - 41622106
Alignment:
Q  211 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 310  Q
    |||| ||||||||| ||||||||||||| ||| |||||| ||| ||||||||||||||    | | ||||||||||||||||||||||| |  | |||||    
T  41622216 aaaagttcactttttagatacattgaatgattaatgtatctagtctttattatagactacgtacactaattattcaatgtatctaaaaaatagattttta 41622117  T
Q  311 cttataatagt 321  Q
    |||||||||||    
T  41622116 cttataatagt 41622106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 22768270 - 22768151
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 303  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||| ||  || || || || ||||| || | ||||||||||||||||||||||||  ||     
T  22768270 tataaacaacactacactttttagatacattgaataattaatgaatgcagtctataataaagactagatacattaattattcaatgtatctaaaatatgg 22768171  T
Q  304 agttttacttataatagtga 323  Q
    |||||| |||||||||||||    
T  22768170 agttttgcttataatagtga 22768151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 49083171 - 49083049
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||| ||||| ||| ||||||||| ||||||| |||||  ||  ||||||||    || || | ||||||||||||||| |||||    
T  49083171 gtcactattataagcaaaatttcacattttagatacattaaataattaatgtaactaatctttatta----ctagatacattaattattcaatgcatcta 49083076  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    |||| ||||||||| |||||||||||||    
T  49083075 aaaa-tgaagttttgcttataatagtga 49083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 2198054 - 2198111
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatag 253  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  2198054 gtcactattataagcaaaactccactttttagatacattgaataattaatgtatatag 2198111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 2198103 - 2198055
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2198103 attaattattcaatgtatctaaaaagtggagttttgcttataatagtga 2198055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 44626168 - 44626293
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||| ||||| || | |||||||||||||||||||| | |||||| ||| || |||||||  |   | | |||||||||||| | ||| |     
T  44626168 gtcactattataatcaaaattttatttttcagatacattgaataactaatgtatctagtctatattataacca--aaaaattaattattcagtatatttg 44626265  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||||||    
T  44626266 aaaagtgaagttttacttataatagtga 44626293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 49083048 - 49083170
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| ||||||||||||||||||| |||| |||| |||||||||||| |||||| |||    || || ||| | |  | |||||||||| ||||||||||    
T  49083048 gtcactattataagcaaaacttcattttt-agatgcattgaataattaatgtatctag----taataaagattagttacattaattatttaatgtatcta 49083142  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    ||| ||||| |||| |||||||||||||    
T  49083143 aaatgtgaaattttgcttataatagtga 49083170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 6464998 - 6464885
Alignment:
Q  211 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 310  Q
    |||||||||||||| | |||| |||||||||| |||||| |||   ||||||||   || | | |||||||||||||||||| | |||||| ||||||||    
T  6464998 aaaacttcacttttaaaataccttgaataattaatgtatctagttattattataacatgtatacattaattattcaatgtattttaaaagtaaagtttta 6464899  T
Q  311 cttataatagtgat 324  Q
    ||||| ||| ||||    
T  6464898 cttatcataatgat 6464885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 22923714 - 22923666
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22923714 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22923666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 22928367 - 22928319
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22928367 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22928319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 22984646 - 22984598
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22984646 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22984598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 22998234 - 22998186
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  22998234 attaattattcaatgtatctaaaaattggagttttgcttataatagtga 22998186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 41622128 - 41622224
Alignment:
Q  221 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataa 317  Q
    |||| |||||||||||||||||  ||||  ||| || || || ||||| || | |||||| ||||||||||||||||||||||| ||||| ||||||    
T  41622128 tttttagatacattgaataattagtgtacgtagtctataataaagactagatacattaatcattcaatgtatctaaaaagtgaacttttatttataa 41622224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 15794819 - 15794769
Alignment:
Q  275 attaattattcaatgtatctaaaa-agtgaagttttacttataatagtgat 324  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  15794819 attaattattcaatgtatctaaaacaatgaaattttacttataatagtgat 15794769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 2198121 - 2198169
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  2198121 attaattattcaatgtatttaaaaagtgaagttttgctt-taatagtgat 2198169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22923665 - 22923718
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22923665 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22928318 - 22928371
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22928318 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22928371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22984597 - 22984650
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22984597 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22984650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22998185 - 22998238
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  22998185 gtcactattataagcaaaactccaatttttagatacattgaataattaatgtat 22998238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 2198159 - 2198118
Alignment:
Q  207 aagcaaaacttcacttttcagatacattgaataattcatgta 248  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  2198159 aagcaaaacttcactttttaaatacattgaataattaatgta 2198118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 5281231 - 5281268
Alignment:
Q  286 aatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  5281231 aatgtatctaaaaagtgaatttttacttatattagtga 5281268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 6464886 - 6464939
Alignment:
Q  197 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtata 250  Q
    ||||||| ||||| ||||||| |||||| | ||||||||||||||| |||||||    
T  6464886 tcattatgataagtaaaactttacttttaaaatacattgaataattaatgtata 6464939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 39396876 - 39396827
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||||||| | |||||| ||||||||||||||||  |||||||||||||    
T  39396876 attaattatcccatgtatttaaaaagtgaagttttgtttataatagtgat 39396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 39897159 - 39897110
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgatgagag 329  Q
    |||||||||| |||||||||||||  |||||||| ||||||||| |||||    
T  39897159 ttattcaatgaatctaaaaagtgattttttacttctaatagtgacgagag 39897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 323
Target Start/End: Original strand, 44156092 - 44156133
Alignment:
Q  282 attcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||| |||| |||||| ||||||    
T  44156092 attcaatgtatctaaaaagtgaatttttgcttatattagtga 44156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 50485791 - 50485840
Alignment:
Q  286 aatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagta 335  Q
    ||||||||||||||||||| |||   ||||||||||||||||| ||||||    
T  50485791 aatgtatctaaaaagtgaaatttagtttataatagtgatgagattgagta 50485840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 52299084 - 52299136
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||| ||||||    
T  52299084 gtcattattataagcaaaattttacttttta-atacattgaataattaatgtat 52299136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 6131484 - 6131436
Alignment:
Q  276 ttaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||||||| ||||||| |||||||| |||||||  |||||||||||||    
T  6131484 ttaattatttaatgtatttaaaaagtaaagttttgattataatagtgat 6131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 15794774 - 15794842
Alignment:
Q  201 tattataagcaaaacttcact-tttcagatacattgaataattcatgtatatagcctttattatagact 268  Q
    ||||||||| |||| |||| | ||| ||||||||||||||||| |||||| | | ||||||||||||||    
T  15794774 tattataagtaaaatttcattgttttagatacattgaataattaatgtatctggtctttattatagact 15794842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 22020166 - 22020110
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagtat 336  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||  |||| ||||||    
T  22020166 ttattgaatgaatctaaaaagtgaacttttgcttataatagtgaccagagggagtat 22020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 20493090 - 20493245
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    ||||| |||||||||||||||||||||||| || ||  |||||||||||||| ||||||||| || |  |||||||||||||||||||||||||||||||    
T  20493090 gttggcaatagtggatgaggaaggaagtatctataga-aaaaatgccaaagatatgggaaagattttcggttcaaaagatcttcacaatgaatacattaa 20493188  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattccgacaattaagcatattt 180  Q
    |  ||||||||   |||| |||||   ||||||||||||| ||||||||||||||||    
T  20493189 aggtttcattgatgctctccaaaaacatagagttcattccaacaattaagcatattt 20493245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 8996887 - 8996792
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgta 291  Q
    |||| ||||||||||||||||  |||||  ||||||||||||||||  |||||||||| |||||||||||||| || | |||||||||||||||||    
T  8996887 gtcactattataagcaaaactctactttctagatacattgaataatcaatgtatatagtctttattatagactagatacattaattattcaatgta 8996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 324
Target Start/End: Original strand, 8717540 - 8717643
Alignment:
Q  221 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatag 320  Q
    |||| ||||||||| ||||||| |||||| ||| |||||||||| ||| || | |||| ||||||||||||| |||||| | || ||| |||||||||||    
T  8717540 tttttagatacattaaataattaatgtatttagtctttattatatactagatacattatttattcaatgtatttaaaaaattaaatttaacttataatag 8717639  T
Q  321 tgat 324  Q
    ||||    
T  8717640 tgat 8717643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 323
Target Start/End: Original strand, 20218550 - 20218679
Alignment:
Q  194 cagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatc 293  Q
    |||||| ||||||||||||||   ||||||| || | ||||||||||   ||||||  || |  |||||||||||||| | || |||||||||||| |||    
T  20218550 cagtcactattataagcaaaaaaacactttttagtttcattgaataaccgatgtatgcagtcagtattatagactggatacatcaattattcaatgaatc 20218649  T
Q  294 taaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||  | || |||||||||||||    
T  20218650 taaaaagtgatttcttgcttataatagtga 20218679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 10495729 - 10495777
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  10495729 attaaatattcaatgtatctaaaaagtgaaattttgcttataatagtga 10495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 43100804 - 43100756
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  43100804 attaattattcaatgtatctaaaaaatgaatttttgcttataatagtga 43100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 10495792 - 10495725
Alignment:
Q  182 atatactacattcagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    ||||||| ||| | |||| |||||||||||||| ||||||||| |||||||||||||| || ||||||    
T  10495792 atatacttcatccggtcactattataagcaaaatttcactttttagatacattgaatatttaatgtat 10495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 8996791 - 8996729
Alignment:
Q  262 atagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||||| || | |||||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  8996791 atagactagatacattaattattcaatgtatctaaaaaccgaaattttgcttataatagtgat 8996729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 8996792 - 8996886
Alignment:
Q  229 tacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||| |||||| ||| || || || |||||  | | ||| ||||||||||||||||| |||||  |||||| |||||||||||||    
T  8996792 tacattgaataattaatgtatctagtctataataaagactatatacattgattattcaatgtatctagaaagtagagttttgcttataatagtga 8996886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 1355419 - 1355511
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaata 117  Q
    ||||| ||| ||||||||||||||||||| || |||| || ||||| |||||  |||| |||||| | |||||||||||| |||||||| ||||    
T  1355419 gttggcaattgtggatgaggaaggaagtagtttcagg-aacaatgctaaagagttggggaaggttttcagttcaaaagatattcacaatcaata 1355511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 13953774 - 13953899
Alignment:
Q  199 attattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaa 297  Q
    |||||||||||||||| || | ||||  ||||| ||| |||||||  | ||||||| |||||||||| | | || | ||| |||||  ||||||||||||    
T  13953774 attattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaa 13953873  T
Q  298 aagtgaagttttacttataatagtga 323  Q
    | ||||||||||  ||||||||||||    
T  13953874 atgtgaagttttgtttataatagtga 13953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 14094981 - 14095106
Alignment:
Q  199 attattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaa 297  Q
    |||||||||||||||| || | ||||  ||||| ||| |||||||  | ||||||| |||||||||| | | || | ||| |||||  ||||||||||||    
T  14094981 attattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaa 14095080  T
Q  298 aagtgaagttttacttataatagtga 323  Q
    | ||||||||||  ||||||||||||    
T  14095081 atgtgaagttttgtttataatagtga 14095106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 39792136 - 39792211
Alignment:
Q  231 cattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagt 306  Q
    |||| ||||||| |||||| |||  ||||||||||| | || | |||||||||||| |||||||||||| ||||||    
T  39792136 cattaaataattaatgtatctagtttttattatagattagatacattaattattcattgtatctaaaaaatgaagt 39792211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 43100755 - 43100801
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataatt 242  Q
    |||| |||||||||||||| |||| |||| |||||||||||||||||    
T  43100755 gtcactattataagcaaaaattcattttttagatacattgaataatt 43100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 8996734 - 8996782
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||||||||||||| |||  |||| ||||||||||||||||| ||||||    
T  8996734 tattataagcaaaatttcggtttttagatacattgaataattaatgtat 8996782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 11532268 - 11532406
Alignment:
Q  24 gttggtaatagtggatgaggaaggaagtatttacagggaaaaatgccaaagaaatgggaaaggttgtgagttcaaaagatcttcacaatgaatacattaa 123  Q
    |||||||||| ||||||||||||||||||  |||||  || ||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||| |    
T  11532268 gttggtaataatggatgaggaaggaagtacgtacaga-aacaatgccaaagatatgggaaaggttttcagttcaaaagatcttcacaatcaatacattga 11532366  T
Q  124 aaatttcattgccactcttcaaaagtttagagttcattcc 163  Q
    | |||| ||||   |||||||||||| |||||||||||||    
T  11532367 agattttattgttgctcttcaaaagtatagagttcattcc 11532406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 323
Target Start/End: Original strand, 50334932 - 50335053
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||| ||||||||||| ||| ||||||||||||||||| |||||| ||  |||||||||||  || | | |||||||||||||| ||||||||||     
T  50334932 tattataaacaaaacttcacattttagatacattgaataattaatgtatctaatctttattataggttgtatacattaattattcaatatatctaaaaaa 50335031  T
Q  301 tgaagttttacttataatagtga 323  Q
    | || |||| |||||||||||||    
T  50335032 t-aaattttgcttataatagtga 50335053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 35239787 - 35239682
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||| ||||| || || ||| |||||||||||||| || |||||| ||| ||||||||||||||  | | |||||||||||||||||||||    
T  35239787 gtcactattataaccaaaatttgacattttagatacattgaatagttaatgtatctagtctttattatagacttaatacattaattattcaatgtatcta 35239688  T
Q  296 aaaagt 301  Q
    ||||||    
T  35239687 aaaagt 35239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 29497471 - 29497369
Alignment:
Q  219 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 318  Q
    |||||| |||||||||||| |||| || ||| ||| ||||||| ||||||| | | |||||||| |||||||||||||||||| || |||| ||||||||    
T  29497471 actttttagatacattgaacaattaatatatctagtctttattgtagactgaatacattaattagtcaatgtatctaaaaagtaaaattttgcttataat 29497372  T
Q  319 agt 321  Q
    |||    
T  29497371 agt 29497369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 50335054 - 50334932
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||| || | |||| ||||| ||||||||||| ||||||| | ||| || || ||| | || | |||||||||||||||||||||    
T  50335054 gtcactattataagcaaaattt-attttttagatatattgaataattaatgtatacaacctataataaagattagatacattaattattcaatgtatcta 50334956  T
Q  296 aaaagtgaagttttacttataata 319  Q
    ||| ||||||||||  ||||||||    
T  50334955 aaatgtgaagttttgtttataata 50334932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 32711221 - 32711319
Alignment:
Q  205 ataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 303  Q
    ||||||||||  |||||||| || | |||||||||||| |||||| | |||| ||||||||||  || | || |||||||||||| |||||||||||||    
T  32711221 ataagcaaaaagtcactttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagtga 32711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 29497371 - 29497471
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||||||||| || |||||| ||||||||||| ||||| ||||||  || ||  | || ||||| || | ||||||| ||||||||||||||||||    
T  29497371 tattataagcaaaattttactttttagatacattgactaattaatgtattcagtctacaataaagactagatatattaattgttcaatgtatctaaaaag 29497470  T
Q  301 t 301  Q
    |    
T  29497471 t 29497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 323
Target Start/End: Original strand, 35239682 - 35239786
Alignment:
Q  219 acttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataat 318  Q
    |||||| ||||||||||||||||| ||||||  || || || || ||||| || | ||||| |||||||||||||||||| || || ||||  |||||||    
T  35239682 actttttagatacattgaataattaatgtattaagtctataataaagactagatacattaactattcaatgtatctaaaatgtcaaattttggttataat 35239781  T
Q  319 agtga 323  Q
    |||||    
T  35239782 agtga 35239786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 328
Target Start/End: Original strand, 53711868 - 53711998
Alignment:
Q  197 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaa 296  Q
    ||||||||||||| |||| ||||||||| | |||| || ||||||| |||||| |   ||||  |||||||| || |  ||||||||||||| ||| |||    
T  53711868 tcattattataagtaaaatttcactttttaaatactttaaataattaatgtatttgatctttcatatagactagatacgttaattattcaatatatataa 53711967  T
Q  297 aaagtgaagttttacttataatagtgatgaga 328  Q
    ||| | || |||||||||| ||||||| ||||    
T  53711968 aaa-ttaaattttacttatgatagtgacgaga 53711998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 42912385 - 42912351
Alignment:
Q  286 aatgtatctaaaaagtgaagttttacttataatag 320  Q
    |||||||||||||||||||||||| ||||||||||    
T  42912385 aatgtatctaaaaagtgaagttttgcttataatag 42912351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 42912352 - 42912385
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacatt 234  Q
    |||||||||||||||||||||||| |||||||||    
T  42912352 tattataagcaaaacttcactttttagatacatt 42912385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 53711916 - 53711867
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    |||||||||| || |||| ||||||||||| |||||||||||||| ||||    
T  53711916 attaattatttaaagtatttaaaaagtgaaattttacttataataatgat 53711867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 48593255 - 48593175
Alignment:
Q  221 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagt 301  Q
    |||| |||| |||||||||||| |||||| | | || |||| |||||  || | || ||||||||||||||||||||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagt 48593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 26221030 - 26221156
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||| |||||||| |||||| ||||||||||||||||| |||||| |||  |||||||||||  | | | |||||||||||| ||||||||    
T  26221030 gtcaatattataaacaaaactttactttttagatacattgaataattaatgtatctagtttttattatagatggtatatattaattattcagtgtatcta 26221129  T
Q  296 aaaagtgaagttttacttataatagtg 322  Q
    ||||||||||||||||||||| |||||    
T  26221130 aaaagtgaagttttacttatattagtg 26221156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 21032662 - 21032539
Alignment:
Q  200 ttattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 299  Q
    ||||||||| ||||| |  |||||| ||||| ||||||||||| |||||| ||| ||||||||||||||| | | |||||||||||||||||| ||||||    
T  21032662 ttattataaacaaaattctactttttagatatattgaataattaatgtatctagtctttattatagactgaatacattaattattcaatgtatataaaaa 21032563  T
Q  300 gtgaagttttacttataatagtga 323  Q
    ||| |||||| |||||||||||||    
T  21032562 gtggagttttgcttataatagtga 21032539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 323
Target Start/End: Original strand, 42364233 - 42364353
Alignment:
Q  203 ttataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtg 302  Q
    |||||| ||||| || |||||| | ||||||||||||||| |||||| ||| |||||||||| ||| || |   ||||||||||||||||||||||||||    
T  42364233 ttataaacaaaaatttactttttaaatacattgaataattaatgtatgtagtctttattataaactagataccctaattattcaatgtatctaaaaagtg 42364332  T
Q  303 aagttttacttataatagtga 323  Q
    ||||||| |||||||||||||    
T  42364333 aagttttgcttataatagtga 42364353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 29486627 - 29486504
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    ||||||||||||||  | |||||| ||||||||||||||||| || ||| ||| |||||| ||| ||| || | |||||||||||||||||||||||| |    
T  29486627 tattataagcaaaatctgactttttagatacattgaataattaatatatttagtctttatcataaactagatacattaattattcaatgtatctaaaatg 29486528  T
Q  301 tgaagttttacttataatagtgat 324  Q
    |||| |||| ||||||||||||||    
T  29486527 tgaaattttgcttataatagtgat 29486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 5240335 - 5240233
Alignment:
Q  221 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatag 320  Q
    |||| ||||||||||||||||| |||||| ||  |||||||||| ||| || | ||||||||||||||||||||||||| | || |||| ||||||||||    
T  5240335 tttttagatacattgaataattaatgtatctaaactttattatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatag 5240236  T
Q  321 tga 323  Q
    |||    
T  5240235 tga 5240233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 301
Target Start/End: Original strand, 21032536 - 21032643
Alignment:
Q  194 cagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatc 293  Q
    |||||| |||||||||||||||| ||||||| | ||||||||||||||| ||||||  || || || || ||||| || | |||||||||||||| ||||    
T  21032536 cagtcactattataagcaaaactccactttttatatacattgaataattaatgtattcagtctataataaagactagatacattaattattcaatatatc 21032635  T
Q  294 taaaaagt 301  Q
    ||||||||    
T  21032636 taaaaagt 21032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 324
Target Start/End: Original strand, 29486509 - 29486632
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||||||||| ||||| ||| ||||||||||||||||| |||||| |||  | |  || |||||  | | ||||||||||||||||||||||||||    
T  29486509 tattataagcaaaatttcacattttagatacattgaataattaatgtatctagtttatgataaagactaaatatattaattattcaatgtatctaaaaag 29486608  T
Q  301 tgaagttttacttataatagtgat 324  Q
    | |  |||| ||||||||||||||    
T  29486609 tcagattttgcttataatagtgat 29486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 7604323 - 7604194
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataa-ttcatgtatatagcctttattatagactggacagattaattattcaatgtatct 294  Q
    |||||||||||||| |||| || |||||| ||||| | ||||||| || ||| || ||| |||||||||||||| ||   |||| ||||||| | |||||    
T  7604323 gtcattattataagtaaaatttgactttttagatatactgaataaattaatggatttagtctttattatagacttgatgcattacttattcagtatatct 7604224  T
Q  295 aaaaagtgaagttttacttataatagtgat 324  Q
    |||||||||| |||| ||||||||||||||    
T  7604223 aaaaagtgaaattttgcttataatagtgat 7604194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 42364354 - 42364227
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||   |||| |||  | || || |||||  | | |||||||||||||||||| ||    
T  42364354 gtcactattataagcaaaacttcactttttagatacattgaataattagggtatctagtttataataaagactacatacattaattattcaatgtattta 42364255  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    |||||| || ||||  |||||| |||||    
T  42364254 aaaagtaaatttttgtttataacagtga 42364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 26221150 - 26221035
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 303  Q
    |||||| |||||||||||||| ||||||| ||||||||| || ||||    || || || | ||| || | ||||||||||||||||||||||||||| |    
T  26221150 tataagtaaaacttcactttttagatacactgaataattaatatataccatctataataaaaactagatacattaattattcaatgtatctaaaaagtaa 26221051  T
Q  304 agttttacttataata 319  Q
    ||||||  ||||||||    
T  26221050 agttttgtttataata 26221035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 5240232 - 5240335
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| |||||||||||||| || | |||| ||||||||||||||||| |||||| |||  | || || ||  | || | |||||||||||||||||||||    
T  5240232 gtcactattataagcaaaatttgattttttagatacattgaataattaatgtatctagtatataataaagtttagatacattaattattcaatgtatcta 5240331  T
Q  296 aaaa 299  Q
    ||||    
T  5240332 aaaa 5240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 892606 - 892560
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 321  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  892606 attaattattcaatgaatctaaaaagtgaatttttgcttataatagt 892560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 892562 - 892610
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||||||||||||| ||||||||| |||| |||||||||||| ||||||    
T  892562 tattataagcaaaaattcactttttagattcattgaataattaatgtat 892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 6834085 - 6834041
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataata 319  Q
    |||||||||||||| |||||||||||| || ||||||||||||||    
T  6834085 attaattattcaatatatctaaaaagtaaaattttacttataata 6834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 6834035 - 6834089
Alignment:
Q  195 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    ||||||||||||||| |||| || |||||| ||||| ||||||||||| ||||||    
T  6834035 agtcattattataagtaaaattttactttttagatatattgaataattaatgtat 6834089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 35969225 - 35969263
Alignment:
Q  286 aatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  35969225 aatgtatctaaaaagtgaatttttacttatattagtgat 35969263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 1098678 - 1098634
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||    
T  1098678 ttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 36864512 - 36864556
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||| |||| |||||||||||||| ||||| |||||||||||||    
T  36864512 ttattgaatgaatctaaaaagtgaacttttatttataatagtgat 36864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 6197832 - 6197959
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||| || |||||| ||| |||||| ||||| |  | | |||||||||| ||||||||||    
T  6197832 gtcattattataagcaaaactccactttttagatacattaaatagttaatgtatctagtctttatcatagattaaatacattaattatttaatgtatcta 6197931  T
Q  296 aaaagtgaagttttacttataatagtga 323  Q
    |||||| ||||||| |||||||||||||    
T  6197932 aaaagtaaagttttgcttataatagtga 6197959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 309
Target Start/End: Complemental strand, 13325225 - 13325116
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||||||||||||| |||||||||||||| || || ||||||||||  |||||| |||    ||||||| ||| || | |||||||||||||||||||||    
T  13325225 gtcattattataaggaaaacttcactttttaggtatattgaataatcaatgtatttag----tattataaactagatacattaattattcaatgtatcta 13325130  T
Q  296 aaaagtgaagtttt 309  Q
    |||| |||||||||    
T  13325129 aaaattgaagtttt 13325116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 6197960 - 6197837
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| ||||||||||||||||| |||||| ||||||||| ||||||| |||||| ||  || |  || ||||| || | ||||| |||| ||||||||||    
T  6197960 gtcactattataagcaaaactttactttttagatacattaaataattaatgtatttaatctatgataaagactagatacattaactatttaatgtatcta 6197861  T
Q  296 aaaagtgaagttttacttataata 319  Q
    ||||||| |||||| |||||||||    
T  6197860 aaaagtggagttttgcttataata 6197837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 27938998 - 27939124
Alignment:
Q  197 tcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaa 296  Q
    ||||||| ||||| |||||| ||||||  |  | |||||||||||  |||||| ||| ||||||||||||||||  | ||| ||||||||||||||||||    
T  27938998 tcattatcataagtaaaactccactttataagtgcattgaataatcaatgtatctagtctttattatagactgggtacattcattattcaatgtatctaa 27939097  T
Q  297 aaagtgaagttttacttataatagtga 323  Q
    ||| | || ||||||| ||||||||||    
T  27939098 aaaataaaattttactcataatagtga 27939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 11322690 - 11322569
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||||||||||| || |||| ||||| ||||||||||| || |||  |  ||||||||||||  ||| | ||||||||||||||| ||||||||||    
T  11322690 tattataagcaaaact-caatttttagatatattgaataattaatatatccaatctttattatagatcggatacattaattattcaatgcatctaaaaag 11322592  T
Q  301 tgaagttttacttataatagtgat 324  Q
    || | |||| ||||||| ||||||    
T  11322591 tg-actttttcttataacagtgat 11322569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 319
Target Start/End: Original strand, 13325116 - 13325220
Alignment:
Q  211 aaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagtttta 310  Q
    ||||||||| |||| ||||||||||||||||| |||||| |||  ||||| |||  ||  | | ||| |||||||||| || |||||||||||||||||     
T  13325116 aaaacttcaatttttagatacattgaataattaatgtatctag--tttataata--ctaaatacattgattattcaatatacctaaaaagtgaagttttc 13325211  T
Q  311 cttataata 319  Q
    |||||||||    
T  13325212 cttataata 13325220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 11322589 - 11322695
Alignment:
Q  217 tcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttata 316  Q
    |||||||| |||| |||||||||||| ||||||     || || || ||| |||| | |||||||||||||| |||||||||| || |||||| ||||||    
T  11322589 tcactttttagatgcattgaataattaatgtatccgatctataataaagattggatatattaattattcaatatatctaaaaattg-agttttgcttata 11322687  T
Q  317 atagtgat 324  Q
    ||||||||    
T  11322688 atagtgat 11322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 158444 - 158486
Alignment:
Q  207 aagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||    
T  158444 aagcaaaatttcactttttagatacattgaataattaatgtat 158486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 158482 - 158448
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagtttt 309  Q
    |||||||||||||||||||||||||||||| ||||    
T  158482 attaattattcaatgtatctaaaaagtgaaatttt 158448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 1214021 - 1214067
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 321  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  1214021 attaattattcaatatatctaaaaagtagagttttatttataatagt 1214067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 43140681 - 43140629
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    ||||||||||||| |||||||||| |||| |||||| |||||||||| ||||||    
T  43140681 gtcattattataaacaaaacttcattttttagatac-ttgaataattaatgtat 43140629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 28205809 - 28205857
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||||||| ||||| || | |||||||||||||||||||||| ||||||    
T  28205809 tattataaacaaaatttaatttttcagatacattgaataattaatgtat 28205857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 43140601 - 43140553
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||||||||||| |||| | |||||  ||||||||||||    
T  43140601 attaattattcaatgtatctaataagtaatgttttgtttataatagtga 43140553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 4132392 - 4132516
Alignment:
Q  196 gtcattattataagcaaaacttcacttttc-agatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatct 294  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||| ||||||||||  |||||||||||||  | | ||||| ||||||||||||||    
T  4132392 gtcaatattataagcaaaatttcacttttttagatacattgaataattaatgtatatagtatttattatagactaaatacattaaatattcaatgtatct 4132491  T
Q  295 aaaaagtgaagttttacttataata 319  Q
    ||||||| |||||||  ||||||||    
T  4132492 aaaaagttaagttttgtttataata 4132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 4132521 - 4132397
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatct- 294  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| || |||||| ||| || || || | |||  | | ||||||||||||||||||||     
T  4132521 gtcattattataaacaaaacttaactttttagatacattgaatatttaatgtatttagtctataataaatactatatacattaattattcaatgtatcta 4132422  T
Q  295 aaaaagtgaagttttacttataata 319  Q
    |||||||||| |||| |||||||||    
T  4132421 aaaaagtgaaattttgcttataata 4132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 338
Target Start/End: Original strand, 38646177 - 38646315
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagatt-aattattcaatgtatctaaaaa 299  Q
    ||||||||| ||||||  |||||| ||||||||||||||||| || ||| ||   ||| |||||||| | | | ||| ||||||||||| |||||||| |    
T  38646177 tattataagtaaaactcaactttttagatacattgaataattaatatatttaatttttgttatagaccgaatacattaaattattcaatatatctaaata 38646276  T
Q  300 gtgaagttttacttataatagtgatgagagtgagtatat 338  Q
    |||||||||| |||||||||||||  |||| ||||||||    
T  38646277 gtgaagttttgcttataatagtgaccagagggagtatat 38646315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 41115556 - 41115698
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    ||||| |||||||| ||||||  |||||  |||||||||||| |||| |||||| ||  |||||||||||| | || | |||||||||  ||||||| ||    
T  41115556 gtcatcattataagtaaaactgtactttgtagatacattgaacaattaatgtatctaatctttattatagagtagatacattaattatgtaatgtatata 41115655  T
Q  296 aaaagtgaagttttacttataatagtgatgagagtgagtatat 338  Q
    |||| | ||||||||||||||||||| |  |||| ||||||||    
T  41115656 aaaaattaagttttacttataatagttaccagagagagtatat 41115698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 26982819 - 26982771
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26982819 attaattattcaatgtatctaaaaagtgaagttttgcttataatagtga 26982771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 26982770 - 26982823
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26982770 gtcactattataagcaaaacttcactttttagatacattgaataattaatgtat 26982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 43250474 - 43250417
Alignment:
Q  195 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatata 252  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  43250474 agtcactattataagcaaaactttactttttagatacattgaataattaatgtatata 43250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 45578066 - 45578005
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgatgagagtgagtat 336  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||  |||| ||||||    
T  45578066 attaattgttcaatgtatctaaaaagtgaaattttacttataatagtgactagagagagtat 45578005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 43250424 - 43250472
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  43250424 attaattattcaatgtatctaaaaagtaaagttttgcttataatagtga 43250472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 38646221 - 38646175
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagt 321  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  38646221 attaattattcaatgtatctaaaaagttgagttttacttataatagt 38646175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 323
Target Start/End: Complemental strand, 43250418 - 43250376
Alignment:
Q  281 tattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  43250418 tattcaatgtatctaaaaagtaaagttttgcttataatagtga 43250376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 21857124 - 21857076
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||||    
T  21857124 attaattattcaatgtgtctaaaaagtaaacttttgcttataatagtga 21857076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 45578016 - 45578072
Alignment:
Q  195 agtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatat 251  Q
    ||||| ||||||||| |||| ||||||||| |||||||||||| |||| ||||||||    
T  45578016 agtcactattataagtaaaatttcactttttagatacattgaacaattaatgtatat 45578072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43250375 - 43250418
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaata 239  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||    
T  43250375 gtcactattataagcaaaactttactttttagatacattgaata 43250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 38646301 - 38646255
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataatt 242  Q
    |||| ||||||||||||||||||||| || ||||| |||||||||||    
T  38646301 gtcactattataagcaaaacttcactatttagatatattgaataatt 38646255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 21587841 - 21587894
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||||||||||||  |||| |||| ||||||| ||||||    
T  21587841 gtcactattataagcaaaacttcactttcaagatgcattaaataattaatgtat 21587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 21857075 - 21857128
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    |||| |||||||||||||| || |||||| ||| ||||||||||||| ||||||    
T  21857075 gtcactattataagcaaaagtttactttttagacacattgaataattaatgtat 21857128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 24155642 - 24155691
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    |||||||||| |||||||||||||| |||||||||  |||| ||||||||    
T  24155642 attaattatttaatgtatctaaaaattgaagttttgtttatgatagtgat 24155691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 34840620 - 34840673
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtat 249  Q
    ||||||||||||||||||| ||||||||| |||| |||| ||||| | ||||||    
T  34840620 gtcattattataagcaaaagttcactttttagattcattcaataaatgatgtat 34840673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 41115679 - 41115562
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    ||||||||| ||||||| | |||| | |||||||  |||||| |||||| ||  || || || ||| | || | ||||||| ||||||||||||| ||||    
T  41115679 tattataagtaaaacttaattttttatatacattacataattaatgtatctactctataataaagattagatacattaattgttcaatgtatctacaaag 41115580  T
Q  301 tgaagttttacttataat 318  Q
    |  |||||||||||||||    
T  41115579 tacagttttacttataat 41115562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 21587890 - 21587842
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||| |||| ||||  ||||||||||||| |||||||||||||    
T  21587890 attaattatttaatgcatcttgaaagtgaagttttgcttataatagtga 21587842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 21857171 - 21857219
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    |||||||||||||| | |||||||| |||| |||| |||||||||||||    
T  21857171 attaattattcaatatgtctaaaaaatgaatttttgcttataatagtga 21857219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 30457820 - 30457864
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||| |||| || ||||||||||| |||||||||||||||||||    
T  30457820 ttattgaatgaatttaaaaagtgaacttttacttataatagtgat 30457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 34703569 - 34703509
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattata 264  Q
    ||||||||||| ||||||||| ||||||||| ||| | | |||||||| | ||||||||||    
T  34703569 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 34703509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 40417032 - 40416972
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattata 264  Q
    ||||||||||| ||||||||| ||||||||| ||| | | |||||||| | ||||||||||    
T  40417032 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattata 40416972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 8352269 - 8352129
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||| ||  || || || | | | || | |||||| ||||||||||||||    
T  8352269 gtcattattataagcaaaacttccctttttagatatattgaataattaatgtatttattctataataaatattagatacattaatcattcaatgtatcta 8352170  T
Q  296 aaaagtgaagttttacttataatagtgatgagagtgagtat 336  Q
    |||| ||||||||| |||||||||||||  |||| ||||||    
T  8352169 aaaaatgaagttttgcttataatagtgaccagagggagtat 8352129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 8352141 - 8352264
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatcta 295  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| ||| |||||| ||   ||||||||||| |  | | |||||||||||||| ||||||    
T  8352141 gtcactattataagcaaaacttcattttttagatacattgaatgattaatgtatctaatatttattatagaataaatacattaattattcaatatatcta 8352240  T
Q  296 aaaagtgaagttttacttataata 319  Q
    ||||| |||||||| |||||||||    
T  8352241 aaaagggaagttttgcttataata 8352264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 315
Target Start/End: Original strand, 26468289 - 26468419
Alignment:
Q  185 tactacattcagtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattatt 284  Q
    |||| ||||| |||| |||||||| ||||| ||||||||| | ||||||||||||||| |||||| ||   ||||||||||||   | | || |||||||    
T  26468289 tactccattcggtcactattataaacaaaatttcactttttaaatacattgaataattaatgtatctaatttttattatagaccatatatatcaattatt 26468388  T
Q  285 caatgtatctaaaaagtgaagttttacttat 315  Q
    ||||||||  |||||||||| ||||||||||    
T  26468389 caatgtataaaaaaagtgaaattttacttat 26468419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 31635757 - 31635871
Alignment:
Q  202 attataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagt 301  Q
    |||| ||| |||||||||||||| | ||||||||||||||  ||||||   |   |||||||||||| || | |||| ||||||||||||||||||||||    
T  31635757 attacaagtaaaacttcactttttatatacattgaataataaatgtattcggtgcttattatagactagatatattagttattcaatgtatctaaaaagt 31635856  T
Q  302 gaagttttacttata 316  Q
    ||| |||| ||||||    
T  31635857 gaaattttgcttata 31635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 14773852 - 14773765
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaat 288  Q
    |||||||||||||| || |||||| ||||| |||| |||||| |||||| ||| || |||||||||||||| | | ||||||||||||    
T  14773852 tattataagcaaaatttaactttttagatatattgtataattaatgtatctagtctgtattatagactggatacaataattattcaat 14773765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 31635871 - 31635752
Alignment:
Q  204 tataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtga 303  Q
    ||||||||||| ||||||||| ||||||||||||||| | || ||| ||| || || ||   || | | | ||| |||||||||||||| ||||||||||    
T  31635871 tataagcaaaatttcactttttagatacattgaataactaatatatctagtctataataagcaccgaatacatttattattcaatgtatataaaaagtga 31635772  T
Q  304 agttttacttataatagtga 323  Q
    |||||||||| |||| ||||    
T  31635771 agttttacttgtaatggtga 31635752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 43731130 - 43731248
Alignment:
Q  201 tattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaag 300  Q
    |||||||||||||| || || | | ||||||||| ||||||| |||||| |||  ||||||| | | | || | ||||| |||||||||||||||||||     
T  43731130 tattataagcaaaaatttacatgtaagatacattcaataattaatgtatctagtttttattaaaaaatagatacattaactattcaatgtatctaaaaaa 43731229  T
Q  301 tgaagttttacttataata 319  Q
    |||| |||| |||||||||    
T  43731230 tgaaattttgcttataata 43731248  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 323
Target Start/End: Complemental strand, 26468419 - 26468301
Alignment:
Q  205 ataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaagtgaa 304  Q
    ||||| |||| |||||||||   ||||||||||||||| || ||||| | || || || | | | || | |||||||||||||||||| |||||||||||    
T  26468419 ataagtaaaatttcactttttttatacattgaataattgatatatatggtctataataaaaattagatacattaattattcaatgtatttaaaaagtgaa 26468320  T
Q  305 gttttacttataatagtga 323  Q
     ||||  ||||||||||||    
T  26468319 attttgtttataatagtga 26468301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 321
Target Start/End: Complemental strand, 43731250 - 43731128
Alignment:
Q  199 attattataagcaaaacttcacttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaa 298  Q
    |||||||||||||||| |||| |||| |||||||||||||| || |||||| ||   |||| || | ||| || | |||||||||| ||||||||| | |    
T  43731250 attattataagcaaaatttcattttttagatacattgaatagttaatgtatctattttttaataaaaactagatacattaattattgaatgtatcttaca 43731151  T
Q  299 agtgaagttttacttataatagt 321  Q
     || || |||| |||||||||||    
T  43731150 tgtaaatttttgcttataatagt 43731128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 30800254 - 30800186
Alignment:
Q  255 ctttattatagactggacagattaattattcaatgtatctaaaaagtgaagttttacttataatagtga 323  Q
    ||||||||||||||||| | |||||| |||||||||||||| ||||| || ||||  |||||| |||||    
T  30800254 ctttattatagactggatacattaatcattcaatgtatctagaaagtaaaattttgtttataagagtga 30800186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 897042 - 897120
Alignment:
Q  221 ttttcagatacattgaataattcatgtatatagcctttattatagactggacagattaattattcaatgtatctaaaaa 299  Q
    |||| ||||||||| ||||||| |||||| ||| ||| ||| || |  ||| | |||||||||||||||||||||||||    
T  897042 tttttagatacatttaataattaatgtatttagtcttcattgtaaatgggatacattaattattcaatgtatctaaaaa 897120  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 39940571 - 39940620
Alignment:
Q  275 attaattattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    |||| ||||| |||| ||||||||||| || |||||||||||||||||||    
T  39940571 attatttattgaatgaatctaaaaagtaaatttttacttataatagtgat 39940620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 10256831 - 10256787
Alignment:
Q  280 ttattcaatgtatctaaaaagtgaagttttacttataatagtgat 324  Q
    ||||| |||| |||||||||||||| |||| ||||||||||||||    
T  10256831 ttattgaatgaatctaaaaagtgaattttttcttataatagtgat 10256787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 34009 - 33971
Alignment:
Q  196 gtcattattataagcaaaacttcacttttcagatacatt 234  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34009 gtcattattacaagcaaaacttcactttttagatacatt 33971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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