View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18177_low_31 (Length: 250)
Name: NF18177_low_31
Description: NF18177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18177_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 33950054 - 33950266
Alignment:
| Q |
13 |
aatatatacatgtatcttatttgaatatttcaaatttaataaatatgattagttttagataagtttcatgaatgattgtcaatattttaaaataataatg |
112 |
Q |
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| T |
33950054 |
aatatatacatgtatcttatttgaatatttcaaatttaataaatatgattagttttagataagtttcatgaatgatcgtcaatattttaaaataataatg |
33950153 |
T |
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| Q |
113 |
tcaaatacaatgtacaatcgcggcgtaaaagaataaacaaaacatggtatgaattgtacatttgtttatttttatggtgaaatggcctactgaataatgc |
212 |
Q |
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| T |
33950154 |
tcaaatacaatgtacaatcgcggcgtaaaagaataaacaaaacatggtatgaattgtacatttgtttatttttatggtgaaatggcctactgaataatgc |
33950253 |
T |
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| Q |
213 |
cacacgttaacat |
225 |
Q |
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| T |
33950254 |
cacacgttaacat |
33950266 |
T |
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