View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_high_1 (Length: 1401)

Name: NF18178_high_1
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_high_1
NF18178_high_1
[»] chr6 (33 HSPs)
chr6 (514-1385)||(19161399-19162270)
chr6 (4-418)||(19162741-19163165)
chr6 (296-349)||(33549131-33549184)
chr6 (295-346)||(12234502-12234553)
chr6 (306-349)||(31622997-31623040)
chr6 (300-349)||(10338174-10338223)
chr6 (296-349)||(12188299-12188352)
chr6 (297-346)||(23910108-23910157)
chr6 (295-346)||(6385892-6385943)
chr6 (298-349)||(14557989-14558040)
chr6 (298-345)||(16405116-16405163)
chr6 (300-347)||(20213070-20213117)
chr6 (298-349)||(21418497-21418548)
chr6 (300-347)||(22107093-22107140)
chr6 (291-337)||(13227149-13227195)
chr6 (299-337)||(30127439-30127477)
chr6 (296-349)||(20863402-20863455)
chr6 (296-349)||(34786450-34786503)
chr6 (295-335)||(9626073-9626113)
chr6 (297-345)||(12216775-12216823)
chr6 (300-348)||(14199947-14199995)
chr6 (298-346)||(24641188-24641236)
chr6 (295-335)||(28841455-28841495)
chr6 (295-346)||(11423596-11423647)
chr6 (295-346)||(12633039-12633090)
chr6 (306-337)||(13661559-13661590)
chr6 (298-349)||(24334023-24334074)
chr6 (298-335)||(346571-346608)
chr6 (301-346)||(3172769-3172814)
chr6 (296-337)||(6758418-6758459)
chr6 (296-349)||(6776603-6776656)
chr6 (296-349)||(14278107-14278160)
chr6 (296-337)||(15951298-15951339)
[»] chr8 (43 HSPs)
chr8 (295-349)||(968389-968443)
chr8 (298-349)||(16852367-16852418)
chr8 (295-349)||(3624607-3624661)
chr8 (300-349)||(29858049-29858098)
chr8 (300-348)||(11819804-11819852)
chr8 (300-348)||(27750758-27750806)
chr8 (297-349)||(29431038-29431090)
chr8 (298-349)||(19703485-19703536)
chr8 (296-346)||(23361645-23361695)
chr8 (295-337)||(35641896-35641938)
chr8 (296-349)||(6536547-6536600)
chr8 (296-349)||(18540325-18540378)
chr8 (296-349)||(33017241-33017294)
chr8 (300-349)||(44780114-44780163)
chr8 (298-349)||(2203519-2203570)
chr8 (294-349)||(4436002-4436057)
chr8 (295-346)||(22193359-22193410)
chr8 (298-349)||(28783087-28783138)
chr8 (299-333)||(11928730-11928764)
chr8 (295-349)||(12281521-12281575)
chr8 (295-349)||(15948044-15948098)
chr8 (294-344)||(28540454-28540504)
chr8 (296-346)||(35583629-35583679)
chr8 (296-349)||(7140736-7140789)
chr8 (296-349)||(8794341-8794394)
chr8 (296-345)||(13129699-13129748)
chr8 (296-349)||(30483880-30483933)
chr8 (296-349)||(35690060-35690113)
chr8 (297-337)||(11492070-11492110)
chr8 (305-349)||(26688892-26688936)
chr8 (298-349)||(3524399-3524450)
chr8 (295-338)||(3721152-3721195)
chr8 (298-329)||(18546360-18546391)
chr8 (298-337)||(36205234-36205273)
chr8 (295-337)||(16843789-16843831)
chr8 (295-349)||(31087253-31087307)
chr8 (296-334)||(31408118-31408156)
chr8 (295-349)||(34628669-34628723)
chr8 (297-334)||(3826774-3826811)
chr8 (300-349)||(6436555-6436604)
chr8 (296-349)||(12988455-12988508)
chr8 (304-349)||(23874386-23874431)
chr8 (300-333)||(33727873-33727906)
[»] scaffold0258 (1 HSPs)
scaffold0258 (296-349)||(15319-15372)
[»] chr3 (59 HSPs)
chr3 (296-349)||(10445135-10445188)
chr3 (277-349)||(21960578-21960650)
chr3 (296-349)||(36720408-36720461)
chr3 (295-349)||(44743850-44743904)
chr3 (295-349)||(51903873-51903927)
chr3 (296-349)||(27259188-27259241)
chr3 (295-346)||(4844506-4844557)
chr3 (295-346)||(4870202-4870253)
chr3 (297-348)||(30311334-30311385)
chr3 (295-349)||(31520600-31520654)
chr3 (296-349)||(2667889-2667942)
chr3 (296-349)||(27093357-27093410)
chr3 (296-349)||(30510195-30510248)
chr3 (296-349)||(32651434-32651487)
chr3 (297-338)||(33899652-33899693)
chr3 (298-335)||(47454615-47454652)
chr3 (300-348)||(8075127-8075175)
chr3 (295-335)||(14186688-14186728)
chr3 (297-337)||(52769980-52770020)
chr3 (298-349)||(14339637-14339688)
chr3 (296-347)||(28703400-28703451)
chr3 (295-346)||(30715772-30715823)
chr3 (296-335)||(37788461-37788500)
chr3 (298-349)||(54990729-54990780)
chr3 (295-349)||(10499104-10499158)
chr3 (295-345)||(20501727-20501777)
chr3 (296-346)||(39253727-39253777)
chr3 (296-337)||(3427549-3427590)
chr3 (296-349)||(4222168-4222221)
chr3 (302-347)||(8853801-8853846)
chr3 (296-349)||(16354888-16354941)
chr3 (300-349)||(27923043-27923092)
chr3 (296-337)||(31608520-31608561)
chr3 (296-349)||(46518655-46518708)
chr3 (296-337)||(53412984-53413025)
chr3 (291-335)||(2597211-2597255)
chr3 (296-348)||(15048057-15048109)
chr3 (295-351)||(26481952-26482008)
chr3 (298-338)||(33861732-33861772)
chr3 (296-340)||(36010778-36010822)
chr3 (301-337)||(45229273-45229309)
chr3 (301-345)||(45308903-45308947)
chr3 (302-349)||(9557347-9557394)
chr3 (298-349)||(16900679-16900730)
chr3 (298-337)||(17108896-17108935)
chr3 (298-349)||(19716224-19716275)
chr3 (298-349)||(25035732-25035783)
chr3 (298-337)||(49494144-49494183)
chr3 (295-349)||(8051241-8051295)
chr3 (299-349)||(11090164-11090214)
chr3 (296-346)||(13808881-13808931)
chr3 (296-337)||(8796089-8796130)
chr3 (301-346)||(12761542-12761587)
chr3 (300-337)||(17765166-17765203)
chr3 (300-337)||(19066486-19066523)
chr3 (297-334)||(19154673-19154710)
chr3 (296-349)||(28531054-28531107)
chr3 (296-333)||(29563943-29563980)
chr3 (296-349)||(31788966-31789019)
[»] chr7 (58 HSPs)
chr7 (298-349)||(20335829-20335880)
chr7 (295-349)||(5668566-5668620)
chr7 (296-349)||(26459406-26459459)
chr7 (295-349)||(2446335-2446389)
chr7 (291-349)||(43215211-43215269)
chr7 (298-346)||(22760893-22760941)
chr7 (294-349)||(22035425-22035480)
chr7 (298-349)||(43590934-43590985)
chr7 (296-346)||(23552148-23552198)
chr7 (295-336)||(7309396-7309437)
chr7 (296-349)||(17041008-17041061)
chr7 (296-349)||(39631871-39631924)
chr7 (298-347)||(42711987-42712036)
chr7 (296-348)||(9871282-9871334)
chr7 (297-349)||(29385740-29385792)
chr7 (297-349)||(30442515-30442567)
chr7 (295-347)||(45709703-45709755)
chr7 (301-349)||(48771965-48772013)
chr7 (295-346)||(3174957-3175008)
chr7 (298-349)||(7499922-7499973)
chr7 (299-346)||(8108611-8108658)
chr7 (298-349)||(15905672-15905722)
chr7 (298-349)||(37085547-37085598)
chr7 (295-349)||(48079670-48079724)
chr7 (296-345)||(7721400-7721449)
chr7 (296-349)||(11700192-11700245)
chr7 (296-337)||(18363735-18363776)
chr7 (297-346)||(23301599-23301648)
chr7 (296-349)||(33222397-33222450)
chr7 (296-348)||(9608625-9608677)
chr7 (296-348)||(9836197-9836249)
chr7 (301-337)||(25590650-25590686)
chr7 (305-349)||(26703152-26703196)
chr7 (298-334)||(29916806-29916842)
chr7 (296-335)||(2882991-2883030)
chr7 (306-349)||(5579240-5579283)
chr7 (303-346)||(7801210-7801253)
chr7 (296-335)||(13106778-13106817)
chr7 (295-334)||(14058295-14058334)
chr7 (295-334)||(14368323-14368362)
chr7 (296-335)||(15137594-15137633)
chr7 (296-331)||(21558173-21558208)
chr7 (298-349)||(38374597-38374648)
chr7 (296-335)||(41519260-41519299)
chr7 (296-334)||(2962501-2962539)
chr7 (305-347)||(27776201-27776243)
chr7 (311-349)||(28236592-28236630)
chr7 (301-335)||(31835233-31835267)
chr7 (300-349)||(5934148-5934197)
chr7 (296-337)||(9183187-9183228)
chr7 (296-337)||(17113834-17113875)
chr7 (298-335)||(18056773-18056810)
chr7 (354-383)||(21854550-21854579)
chr7 (299-348)||(29785300-29785349)
chr7 (296-349)||(30579362-30579415)
chr7 (296-349)||(33869441-33869494)
chr7 (298-335)||(37473655-37473692)
chr7 (298-347)||(49050489-49050538)
[»] chr5 (40 HSPs)
chr5 (296-346)||(16773837-16773887)
chr5 (296-349)||(14285188-14285241)
chr5 (296-349)||(25627084-25627137)
chr5 (295-347)||(39327085-39327137)
chr5 (298-351)||(84849-84902)
chr5 (297-346)||(1410657-1410705)
chr5 (296-349)||(29075808-29075861)
chr5 (300-349)||(30109308-30109357)
chr5 (296-349)||(34984833-34984886)
chr5 (296-337)||(43442235-43442276)
chr5 (295-387)||(8278270-8278353)
chr5 (290-346)||(9842836-9842892)
chr5 (306-345)||(4793094-4793133)
chr5 (295-346)||(14495800-14495851)
chr5 (298-349)||(30883196-30883247)
chr5 (291-337)||(25979209-25979255)
chr5 (300-345)||(17028264-17028309)
chr5 (300-349)||(21589315-21589364)
chr5 (299-348)||(35982716-35982765)
chr5 (295-347)||(22020857-22020909)
chr5 (298-334)||(35360084-35360120)
chr5 (296-335)||(8779306-8779345)
chr5 (298-349)||(16457837-16457888)
chr5 (296-335)||(29173531-29173570)
chr5 (296-335)||(37258362-37258401)
chr5 (295-337)||(12883879-12883921)
chr5 (300-337)||(87423-87460)
chr5 (298-335)||(3315256-3315293)
chr5 (301-330)||(5390853-5390882)
chr5 (296-337)||(6844768-6844809)
chr5 (296-349)||(7918465-7918518)
chr5 (300-349)||(15485420-15485468)
chr5 (298-327)||(17675759-17675788)
chr5 (296-349)||(18595997-18596050)
chr5 (296-349)||(21549133-21549186)
chr5 (300-349)||(22737109-22737158)
chr5 (296-345)||(26078047-26078096)
chr5 (296-333)||(27841015-27841052)
chr5 (296-349)||(30000143-30000196)
chr5 (296-337)||(36958118-36958159)
[»] scaffold0299 (1 HSPs)
scaffold0299 (296-349)||(11555-11608)
[»] chr4 (50 HSPs)
chr4 (298-387)||(19238575-19238655)
chr4 (296-349)||(23377983-23378036)
chr4 (296-349)||(37109347-37109400)
chr4 (298-351)||(39509095-39509148)
chr4 (298-349)||(46295124-46295175)
chr4 (295-349)||(49576889-49576943)
chr4 (296-349)||(2622391-2622444)
chr4 (296-349)||(7949450-7949503)
chr4 (296-349)||(13015454-13015507)
chr4 (296-349)||(37274455-37274508)
chr4 (298-349)||(55427198-55427249)
chr4 (299-349)||(31759657-31759707)
chr4 (296-349)||(7292794-7292847)
chr4 (298-335)||(30938217-30938254)
chr4 (300-349)||(38869795-38869844)
chr4 (299-348)||(46329192-46329241)
chr4 (295-351)||(2185027-2185083)
chr4 (300-348)||(8030204-8030252)
chr4 (296-347)||(19680784-19680835)
chr4 (298-349)||(32992639-32992690)
chr4 (298-349)||(37720212-37720263)
chr4 (295-346)||(51954144-51954195)
chr4 (295-349)||(17618308-17618362)
chr4 (304-346)||(24827855-24827897)
chr4 (296-346)||(28635726-28635776)
chr4 (296-337)||(12798723-12798764)
chr4 (298-331)||(19229206-19229239)
chr4 (296-349)||(24234672-24234725)
chr4 (296-348)||(4249205-4249257)
chr4 (296-348)||(8306513-8306565)
chr4 (298-346)||(9936959-9937007)
chr4 (298-334)||(47044759-47044795)
chr4 (295-335)||(51948521-51948561)
chr4 (298-349)||(37980146-37980196)
chr4 (297-336)||(43623441-43623480)
chr4 (296-335)||(51622526-51622565)
chr4 (295-346)||(52254399-52254450)
chr4 (298-349)||(56409978-56410028)
chr4 (296-346)||(11592149-11592199)
chr4 (299-337)||(41346962-41347000)
chr4 (296-337)||(7539629-7539670)
chr4 (353-386)||(9241069-9241102)
chr4 (296-349)||(16581720-16581773)
chr4 (296-349)||(19531998-19532051)
chr4 (296-337)||(21660140-21660181)
chr4 (296-337)||(21668904-21668945)
chr4 (296-349)||(33632132-33632185)
chr4 (353-386)||(44865333-44865366)
chr4 (298-347)||(49262682-49262731)
chr4 (296-345)||(53496908-53496957)
[»] chr1 (57 HSPs)
chr1 (296-349)||(21547476-21547529)
chr1 (300-348)||(6122822-6122870)
chr1 (295-347)||(12370192-12370244)
chr1 (297-349)||(15786317-15786369)
chr1 (297-349)||(31383795-31383847)
chr1 (297-344)||(7219915-7219962)
chr1 (295-334)||(12587312-12587351)
chr1 (296-346)||(3265954-3266004)
chr1 (296-337)||(2799901-2799942)
chr1 (296-349)||(4566575-4566628)
chr1 (296-349)||(8177178-8177231)
chr1 (296-349)||(9165191-9165244)
chr1 (296-349)||(10526850-10526903)
chr1 (296-349)||(17745252-17745305)
chr1 (296-337)||(33700769-33700810)
chr1 (296-349)||(36371497-36371550)
chr1 (296-349)||(50901609-50901662)
chr1 (298-349)||(24047100-24047151)
chr1 (295-334)||(51814536-51814575)
chr1 (298-349)||(52116779-52116830)
chr1 (295-333)||(2220015-2220053)
chr1 (296-346)||(8904444-8904494)
chr1 (305-386)||(15064961-15065036)
chr1 (295-337)||(16893433-16893475)
chr1 (295-337)||(17439956-17439998)
chr1 (299-337)||(38947471-38947509)
chr1 (299-349)||(40257426-40257476)
chr1 (296-337)||(1247152-1247193)
chr1 (299-348)||(9117147-9117196)
chr1 (296-349)||(18459227-18459280)
chr1 (296-349)||(21267989-21268042)
chr1 (296-349)||(27476767-27476820)
chr1 (298-346)||(12259290-12259338)
chr1 (298-346)||(16169976-16170024)
chr1 (298-334)||(19528325-19528361)
chr1 (296-344)||(44126427-44126475)
chr1 (298-349)||(952538-952589)
chr1 (298-349)||(4824998-4825049)
chr1 (295-334)||(26232356-26232395)
chr1 (298-349)||(31605846-31605897)
chr1 (298-349)||(43445990-43446041)
chr1 (295-345)||(18037608-18037658)
chr1 (296-334)||(44961807-44961845)
chr1 (295-349)||(51013121-51013175)
chr1 (295-333)||(51281394-51281432)
chr1 (296-349)||(6650622-6650675)
chr1 (296-345)||(10150865-10150914)
chr1 (296-349)||(11063583-11063636)
chr1 (296-333)||(12662325-12662362)
chr1 (298-347)||(17297013-17297062)
chr1 (296-349)||(30420337-30420390)
chr1 (312-349)||(31794276-31794313)
chr1 (296-337)||(40810506-40810547)
chr1 (298-335)||(45266875-45266912)
chr1 (296-337)||(51703818-51703859)
chr1 (298-335)||(52029935-52029972)
chr1 (296-349)||(52336770-52336823)
[»] chr2 (47 HSPs)
chr2 (298-346)||(39715022-39715070)
chr2 (297-349)||(42327392-42327444)
chr2 (295-349)||(4262297-4262351)
chr2 (295-349)||(7799030-7799084)
chr2 (298-349)||(21213796-21213847)
chr2 (298-349)||(23052521-23052572)
chr2 (298-345)||(29503302-29503349)
chr2 (298-349)||(37480102-37480153)
chr2 (299-345)||(33839259-33839305)
chr2 (296-349)||(11251114-11251167)
chr2 (301-346)||(28846721-28846766)
chr2 (296-349)||(33569854-33569907)
chr2 (296-345)||(33582004-33582053)
chr2 (300-348)||(21195676-21195724)
chr2 (298-349)||(19016058-19016109)
chr2 (298-349)||(21939121-21939172)
chr2 (295-349)||(12086124-12086178)
chr2 (296-346)||(19244139-19244189)
chr2 (295-349)||(23140907-23140961)
chr2 (295-349)||(23552697-23552751)
chr2 (295-337)||(25637190-25637232)
chr2 (299-345)||(32687512-32687558)
chr2 (295-349)||(42602581-42602635)
chr2 (300-346)||(42860378-42860424)
chr2 (296-349)||(42922441-42922495)
chr2 (296-349)||(1729843-1729896)
chr2 (296-349)||(11062387-11062440)
chr2 (296-349)||(13803522-13803575)
chr2 (296-337)||(14500316-14500357)
chr2 (297-345)||(27244339-27244387)
chr2 (296-343)||(3661004-3661051)
chr2 (298-349)||(6099517-6099567)
chr2 (298-349)||(26482120-26482170)
chr2 (299-346)||(29197375-29197422)
chr2 (291-346)||(30907619-30907674)
chr2 (296-338)||(6859308-6859350)
chr2 (299-349)||(7667468-7667518)
chr2 (300-346)||(12994376-12994422)
chr2 (303-349)||(37755974-37756020)
chr2 (296-346)||(40416386-40416436)
chr2 (295-349)||(41504931-41504985)
chr2 (297-334)||(7599978-7600015)
chr2 (353-386)||(16525177-16525210)
chr2 (296-337)||(16918574-16918615)
chr2 (296-345)||(19322799-19322848)
chr2 (296-349)||(30410545-30410598)
chr2 (297-334)||(31573638-31573675)
[»] scaffold0194 (1 HSPs)
scaffold0194 (295-337)||(13041-13083)
[»] scaffold1367 (1 HSPs)
scaffold1367 (296-349)||(836-889)
[»] scaffold0180 (1 HSPs)
scaffold0180 (296-349)||(19958-20011)
[»] scaffold0291 (1 HSPs)
scaffold0291 (298-337)||(2468-2507)
[»] scaffold0008 (1 HSPs)
scaffold0008 (295-349)||(49333-49387)
[»] scaffold0126 (1 HSPs)
scaffold0126 (296-349)||(25343-25396)
[»] scaffold0002 (1 HSPs)
scaffold0002 (296-349)||(94967-95020)
[»] scaffold0238 (2 HSPs)
scaffold0238 (296-335)||(2707-2746)
scaffold0238 (296-349)||(5220-5273)
[»] scaffold0122 (1 HSPs)
scaffold0122 (302-349)||(6921-6968)
[»] scaffold0118 (1 HSPs)
scaffold0118 (296-334)||(41629-41667)
[»] scaffold0074 (1 HSPs)
scaffold0074 (296-346)||(45755-45805)
[»] scaffold0009 (1 HSPs)
scaffold0009 (300-345)||(145913-145958)


Alignment Details
Target: chr6 (Bit Score: 796; Significance: 0; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 796; E-Value: 0
Query Start/End: Original strand, 514 - 1385
Target Start/End: Complemental strand, 19162270 - 19161399
Alignment:
Q  514 cttacatgggagtctctaaccacagcgaaagcagaaatctcgacaatgcctttggaactcataatcaaagctagagacacagcatccttcaatggcatct 613  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162270 cttacatgggagtctctaaccacagcgaaagcagaaatctcgacaacgcctttggaactcataatcaaagctagagacacagcatccttcaatggcatct 19162171  T
Q  614 tactgcgtaacggaactatcatgcaagcaataaatttggtaacaaaaatcaatacaataagagccaaagtttgcaccataaaatcatcaatacttccatc 713  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  19162170 tactgcgtaaaggaactatcatgcaagcaataaatttggtaacaaaaatcactacaataagaaccaaagtttgcaccataaaatcatcaatacttccatc 19162071  T
Q  714 attttcatttctccatctcaacaagtctttgaaatctatcctcataacacttgtagtcacaaacaatggcatcaaaatctcattaacaaaagtatcaann 813  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  19162070 attttcatttctccatctcaacaactctttgaaatctaccctcataacacttgtagtcacaaacaatggcatcaaaatctcattaacaaaagtatcaatt 19161971  T
Q  814 nnnnnnataatagctgtgcctaatggaggtccttctggaatagccaaacccaacacaaaaggtccaaagagactaaagaatccaaatttatatgaagcat 913  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19161970 ttttttataatagctgtgcctaatggaggtccttctggaatagccaaacccaacacaaaaggtccaaagagactaaagaatccaaatttatatgaagcat 19161871  T
Q  914 aggatgataacaaagccaatatgagtgcactataaacatagttatcattcacatgagaaccttccggcgtctcttttataatccaaaacatcgctggtcg 1013  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19161870 aggatgataacaaagcaaatatgagtgcactataaacatagttatcattcacatgagaaccttccggcgtctcttttataatccaaaacatcgctggtcg 19161771  T
Q  1014 aataatgaatataaccaatagtataaagaagatagcggacgcaatgcaaagcaaagcatctgctaaaccacgctcctcgtataatttatcaaacgtcatt 1113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  19161770 aataatgaatataaccaatagtataaagaagatagcggacgcaatgcaaagcaaagcatctgctaaaccacgctccgcgtataatttctcaaacgtcatt 19161671  T
Q  1114 aacgatgctatgaatacactgaaaatttcactgactaatgatgctgattggccgattcgacccaattcggaattcaagatctttagatcacttaatgttg 1213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19161670 aacgatgctatgaatacactgaaaatttcactgactaatgatgctgattggccgattcgacccaattcggaattcaagatcttgagatcacttaatgttg 19161571  T
Q  1214 aggaaatgacagggaaaggagtcatacagaacaatccaatgataattgtaaatatcttcgttcgctcggggtgtatgaatctttgcgaggagaacattag 1313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  19161570 aggaaatgacagggaaaggagtcatacagaacaatccaatgataattgtaaatatcttcgttcgcccggggtgtatgaatctttgcgagatgaacattag 19161471  T
Q  1314 aaccgcaatgccacatagaaaaggaaccactatagcactacagcctatgatggtggtaccacttctagtttt 1385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19161470 aaccgcaatgccacatagaaaaggaaccactatagcactacagcctatgatggtggtaccacttctagtttt 19161399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 4 - 418
Target Start/End: Complemental strand, 19163165 - 19162741
Alignment:
Q  4 gatggacatcatcaataaagcaaagatgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgacgcttg 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19163165 gatggacatcatcaataaagcaaagacgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgatgcttg 19163066  T
Q  104 aaaatcgcttactgttgagtttgtgatcttatcagtattgaatcaacaaaaacatgagaaaagaaataccagttcagttttgaagaatttatatttgttt 203  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19163065 aaaatagcttactgttgagtttgtgatcttatcggtattgaatcaacaaaaacatgagaaaagaaataccagttgagttttgaagaatttatatttgttt 19162966  T
Q  204 cgttgttttttaacaa----------attgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 293  Q
    ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162965 cgttgttttttaacaaaccgacactgattgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 19162866  T
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccattgaagccaataccatcaggccaacccaagtgggttaagactat 393  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||    
T  19162865 aggagagaatcgaacctgagatctcgaggaggagcacactcccgtgtcccaagccattgaagacaataccattagggcaacccaagtgagttaagactat 19162766  T
Q  394 gatattctaattaaggtaaggagca 418  Q
    |||||||||||||||||||| ||||    
T  19162765 gatattctaattaaggtaagcagca 19162741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 33549184 - 33549131
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcca 33549131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 12234502 - 12234553
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  12234502 ggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaag 12234553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 31622997 - 31623040
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagcca 31623040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 10338174 - 10338223
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagcca 10338223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 12188299 - 12188352
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||    
T  12188299 gagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagcca 12188352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 23910108 - 23910157
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 6385943 - 6385892
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||||  |||||||||||| ||||| ||||||||    
T  6385943 ggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaag 6385892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 14558040 - 14557989
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagcca 14557989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 16405163 - 16405116
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||    
T  16405163 gagaatcgaaactgagacctcgaggagaagcacactcccaggtcccaa 16405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 20213117 - 20213070
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||    
T  20213117 gaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 21418548 - 21418497
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||||||||    
T  21418548 gagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagcca 21418497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 22107140 - 22107093
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||    
T  22107140 gaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 13227149 - 13227195
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||    
T  13227149 catatgagagaatcgaacttgagacttcgaggaggagcacactccca 13227195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 30127477 - 30127439
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactccca 30127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 20863455 - 20863402
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| || ||||||||| ||||||||||||||||| | |||||||||||    
T  20863455 gagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagcca 20863402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 34786450 - 34786503
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| |||||| ||||| |||||||||||||||  ||||||||||    
T  34786450 gagagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagcca 34786503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 9626113 - 9626073
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  9626113 ggagagaatcgaacatgagacctcgaggaggagcatactcc 9626073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 12216823 - 12216775
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||||||||||||||||||| ||||||||| || || |||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcacattcgcaggtcccaa 12216775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 14199947 - 14199995
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  14199947 gaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcc 14199995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 24641188 - 24641236
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||| | ||||||||||||||||||||||||  |||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaag 24641236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 28841495 - 28841455
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  28841495 ggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 11423647 - 11423596
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||| |||||||||||||||||||||||| |||| |||||||  |||||||    
T  11423647 ggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaag 11423596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 12633090 - 12633039
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||  |||||||    
T  12633090 ggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaag 12633039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 13661590 - 13661559
Alignment:
Q  306 aacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||||||||||||||||||    
T  13661590 aacctgagacctcgaggaggagcacactccca 13661559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 24334023 - 24334074
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| ||||||||||||| ||||||||||| ||| | |||||||||||||    
T  24334023 gagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagcca 24334074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 346608 - 346571
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 3172769 - 3172814
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  3172769 aatcgaatctgagacctcgatgaggagcatactcccaggtcccaag 3172814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 6758418 - 6758459
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||| | ||||||||||||| ||||||||||||||    
T  6758418 gagagaatcgatcttgagacctcgaggtggagcacactccca 6758459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 6776603 - 6776656
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||| |||||| |||||||||||||||| ||||  ||||||||||    
T  6776603 gagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagcca 6776656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 14278107 - 14278160
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||||||||||||  ||||||||| |||||||| |||| ||||||    
T  14278107 gagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagcca 14278160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 15951298 - 15951339
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||| |||| |||||||| |||||||||||||||||||    
T  15951298 gagagaattgaacatgagaccttgaggaggagcacactccca 15951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 1e-19; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 968443 - 968389
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  968443 ggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcca 968389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 16852418 - 16852367
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcca 16852367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 3624661 - 3624607
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  3624661 ggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagcca 3624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 29858049 - 29858098
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagcca 29858098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 11819852 - 11819804
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11819852 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 11819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 27750806 - 27750758
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 27750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 29431090 - 29431038
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagcca 29431038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 19703485 - 19703536
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcca 19703536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 23361645 - 23361695
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  23361645 gagagaattgaacctgagaccttgaggaggagcacactcccatatcccaag 23361695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 35641896 - 35641938
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  35641896 ggagagaatcgaacctgagacatcgaggaggagcacactccca 35641938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 6536600 - 6536547
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  6536600 gagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagcca 6536547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 18540378 - 18540325
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| |||||| || ||||||||| |||||||||||    
T  18540378 gagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagcca 18540325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 33017294 - 33017241
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||| ||| || ||||||||    
T  33017294 gagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagcca 33017241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 44780114 - 44780163
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  44780114 gaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagcca 44780163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 2203570 - 2203519
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| || |||||||||| ||||||||||||||||||| |||||||||||    
T  2203570 gagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagcca 2203519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 4436057 - 4436002
Alignment:
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||  ||||||||| |||||||||||| |||||||||| |||||||    
T  4436057 aggagagaatcgagtctgagaccttgaggaggagcactctcccatgtctcaagcca 4436002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 22193359 - 22193410
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||| |||||| ||||||||||||||||||| | ||||||    
T  22193359 ggagagaatcgaacctaagaccttgaggaggagcacactcccaggccccaag 22193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 28783138 - 28783087
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||| |||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagcca 28783087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 11928730 - 11928764
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||||||||||||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 12281575 - 12281521
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| ||||||| ||||||||||||||||| |||||||| || |||||||||||    
T  12281575 ggagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagcca 12281521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 15948044 - 15948098
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||| |||||||||||    
T  15948044 ggagagaatcgaacctatgacatcgaggaggagcatactcccaagtcccaagcca 15948098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 28540504 - 28540454
Alignment:
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactcccatgtccca 344  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  28540504 aggagagaattgaacctgagacctagagaaggagcacactctcatgtccca 28540454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 35583679 - 35583629
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||| ||||| |||||||||||||||||||||| ||||||| ||||||||    
T  35583679 gagagtatcgatcctgagacctcgaggaggagcaaactcccaagtcccaag 35583629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 7140789 - 7140736
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| |||||| ||||||||||||||||| ||||  ||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagcca 7140736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 8794341 - 8794394
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||  ||||||||||||||| ||| || ||||||||    
T  8794341 gagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagcca 8794394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 13129748 - 13129699
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||||||||||| |||| |||||||||| |||||||| |||||||    
T  13129748 gagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaa 13129699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 30483880 - 30483933
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| |||||||||||   |||||||||||||||||||| ||||||||||    
T  30483880 gagagaattgaacctgagactctgaggaggagcacactcccatatcccaagcca 30483933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 35690060 - 35690113
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||| || ||||  ||||||||||    
T  35690060 gagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagcca 35690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 11492070 - 11492110
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactccca 11492110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 26688936 - 26688892
Alignment:
Q  305 gaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagcca 26688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 3524399 - 3524450
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| |||||| |||||| ||||||||||||||||| | |||||||||||    
T  3524399 gagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagcca 3524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 3721152 - 3721195
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccat 338  Q
    ||||| |||||||||||| || ||||||||||||||||||||||    
T  3721152 ggagaaaatcgaacctgaaacatcgaggaggagcacactcccat 3721195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 18546360 - 18546391
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagca 329  Q
    ||||||||||||||||||||||||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagca 18546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 36205273 - 36205234
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactccca 36205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 16843789 - 16843831
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||| || | |||||||||||||||||    
T  16843789 ggagagaatcgaacctgagatcttgcggaggagcacactccca 16843831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 31087253 - 31087307
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| ||||||||||||||||||||||||| | | |||||||  ||||||||||    
T  31087253 ggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagcca 31087307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 31408118 - 31408156
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  31408118 gagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 34628723 - 34628669
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||| | |||||| | ||||||||||  ||||||||||    
T  34628723 ggagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagcca 34628669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 3826774 - 3826811
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactc 3826811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 6436555 - 6436604
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| ||||||||| | ||||||||||||||| | |||||||||||    
T  6436555 gaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagcca 6436604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 12988508 - 12988455
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| ||||||||||| |||| ||||||||||||||| ||| || ||||||||    
T  12988508 gagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagcca 12988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 23874386 - 23874431
Alignment:
Q  304 cgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||| | ||||| |||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagcca 23874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 33727873 - 33727906
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||| |||||||||||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 6e-19; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 15319 - 15372
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcca 15372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 6e-19; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 10445135 - 10445188
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10445135 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagcca 10445188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 21960650 - 21960578
Alignment:
Q  277 taaattagcccactcataggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| || | |||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  21960650 taaattagcccacccaaatgagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagcca 21960578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 36720461 - 36720408
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  36720461 gagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagcca 36720408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 44743850 - 44743904
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  44743850 ggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 51903873 - 51903927
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  51903873 ggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagcca 51903927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 27259241 - 27259188
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  27259241 gagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagcca 27259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 4844506 - 4844557
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  4844506 ggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaag 4844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 4870202 - 4870253
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  4870202 ggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaag 4870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 30311385 - 30311334
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcc 30311334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 31520600 - 31520654
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||    
T  31520600 ggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagcca 31520654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 2667942 - 2667889
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagcca 2667889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 27093357 - 27093410
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| |||||||||||| ||||||||||||||||||| || ||||||||    
T  27093357 gagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagcca 27093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 30510195 - 30510248
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||| ||||||| ||||| | |||||||||||    
T  30510195 gagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagcca 30510248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 32651434 - 32651487
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| |||||| || ||||||||||||||||||| |||||||||||    
T  32651434 gagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagcca 32651487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 33899693 - 33899652
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccat 338  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacactcccat 33899652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 47454615 - 47454652
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactcc 47454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 8075127 - 8075175
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  8075127 gaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcc 8075175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 14186728 - 14186688
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  14186728 ggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 52769980 - 52770020
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  52769980 agagaatcgaacctgagacctcaaggaggagcacactccca 52770020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 14339688 - 14339637
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| | |||||||||||||||||||  ||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagcca 14339637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 28703400 - 28703451
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    |||||||||||||||||||||| || ||||||||||||||||  ||||||||    
T  28703400 gagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagc 28703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 30715823 - 30715772
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||| || | ||||||||||||||||||| ||||||||    
T  30715823 ggagagaatcgaacctgaaacattgaggaggagcacactcccaagtcccaag 30715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37788461 - 37788500
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactcc 37788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 54990780 - 54990729
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| |||||||||||| |||| | |||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagcca 54990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 10499104 - 10499158
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||| |||| ||||| |||||||  ||||||||||    
T  10499104 ggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagcca 10499158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 20501777 - 20501727
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||||||||||||  ||||||||||||||| || |||||||    
T  20501777 ggagagaatcgaacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 39253777 - 39253727
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||| || ||||||||||||||||  |||||||    
T  39253777 gagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 3427549 - 3427590
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  3427549 gagagaatcgaatctgagaccttgaggaggagcacactccca 3427590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 4222221 - 4222168
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||| | |||||||||||||||||||  ||||||||||    
T  4222221 gagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagcca 4222168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 8853801 - 8853846
Alignment:
Q  302 atcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  8853801 atcgaacatgagacctcaaggaggagcatactcccatgtcccaagc 8853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 16354888 - 16354941
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||  |||||||||||||||| || || ||||||||    
T  16354888 gagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagcca 16354941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 27923043 - 27923092
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||||    
T  27923043 gaatcgaacctgagactatgaggaggagcacacttccatgtcccaagcca 27923092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 31608520 - 31608561
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  31608520 gagagaatcaaatctgagacctcgaggaggagcacactccca 31608561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 46518708 - 46518655
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||||||| |||| |||||||||||||||||||  ||||||||||    
T  46518708 gagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagcca 46518655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 53413025 - 53412984
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactccca 53412984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 2597211 - 2597255
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||    
T  2597211 catagtagagattcgaacctgagacctcaaggaggagcacactcc 2597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 15048057 - 15048109
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||| ||||||||||||||||| ||||||||||||| |||||  |||||||||    
T  15048057 gagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcc 15048109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 26482008 - 26481952
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccatt 351  Q
    |||||||||||||||| | || | |||||||||||||||| || |||||||||||||    
T  26482008 ggagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagccatt 26481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 33861732 - 33861772
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccat 338  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  33861732 gagaatcgaacattagacctcgaggaggagcacactcccat 33861772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 36010822 - 36010778
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgt 340  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||    
T  36010822 gagagaatcgaacttgagactttgaggaggagcacactcccatgt 36010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 45229309 - 45229273
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||| ||||||||||||||||||||    
T  45229309 aatcgaacctgagaccacgaggaggagcacactccca 45229273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 45308903 - 45308947
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||||||||||||||||||||||| |||| || |||||||    
T  45308903 aatcgaacctgagacctcgaggaggagcatactcacaagtcccaa 45308947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 9557394 - 9557347
Alignment:
Q  302 atcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||||||||||||||||||| ||  ||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagcca 9557347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 16900679 - 16900730
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||||| || |||||||||||||| | |||||||||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagcca 16900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 17108896 - 17108935
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactccca 17108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 19716275 - 19716224
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| ||||||| |||||||||||||||||   |||||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagcca 19716224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 25035783 - 25035732
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| | |||||||||||||||| || || |||||||||||    
T  25035783 gagaatcgaacctgaaatctcgaggaggagcacattctcaggtcccaagcca 25035732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 49494144 - 49494183
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  49494144 gagaatcaaacctgagacctcgaggaagagcacactccca 49494183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 8051295 - 8051241
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||||||||| ||||||||||||||| |||| ||| ||| |||||||||||    
T  8051295 ggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagcca 8051241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 11090164 - 11090214
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| || |||||||||||||||||||| |||||  ||||||||||    
T  11090164 agaatcgaaactaagacctcgaggaggagcacattcccagatcccaagcca 11090214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 13808881 - 13808931
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||| ||||||||||||| ||||||||||||||| |||  |||||||    
T  13808881 gagagaattgaacctgagacctagaggaggagcacactgccagatcccaag 13808931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 8796089 - 8796130
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  8796089 gagagaatcgaacttgagaccttgaggaggagcatactccca 8796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 12761587 - 12761542
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||| ||| ||||||| |||||||||| ||||||||    
T  12761587 aatcgaacctgagagctcaaggaggaacacactcccaggtcccaag 12761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 17765203 - 17765166
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||| || |||||||||||||||||||    
T  17765203 gaatcgaacctgagatcttgaggaggagcacactccca 17765166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 19066523 - 19066486
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||| || |||||||||||||||||||    
T  19066523 gaatcgaacctgagatcttgaggaggagcacactccca 19066486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 19154710 - 19154673
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||  |||||||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactc 19154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 28531054 - 28531107
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| || ||| |||||||||||||||||| |||||||  ||||||||||    
T  28531054 gagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagcca 28531107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 29563980 - 29563943
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  29563980 gagagaatcgaacctgagacttcgaggagaagcacact 29563943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 31788966 - 31789019
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||| ||||| | ||||||||||||||||||||||||  ||||||||||    
T  31788966 gagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagcca 31789019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 9e-18; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 20335829 - 20335880
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagcca 20335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 5668566 - 5668620
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  5668566 ggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagcca 5668620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 26459406 - 26459459
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcca 26459459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 2446389 - 2446335
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  2446389 ggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagcca 2446335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 349
Target Start/End: Complemental strand, 43215269 - 43215211
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  43215269 cataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcca 43215211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 22760941 - 22760893
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaag 22760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 22035480 - 22035425
Alignment:
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  22035480 aggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagcca 22035425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 43590985 - 43590934
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagcca 43590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 23552198 - 23552148
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaag 23552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 7309437 - 7309396
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccc 336  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7309437 ggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 17041008 - 17041061
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||| |||  ||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagcca 17041061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 39631924 - 39631871
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||||||||||    
T  39631924 gagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagcca 39631871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 42712036 - 42711987
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagc 42711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 9871282 - 9871334
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||| ||||||| |||||||||||||||||||||  |||||||||    
T  9871282 gagagaatcgaatctgagacttcgaggaggagcacactcccaaatcccaagcc 9871334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 29385740 - 29385792
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| |||||||||||| ||||||||||||||||| | |||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagcca 29385792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 30442567 - 30442515
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||| |||||| ||||||||||| ||||||| |||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagcca 30442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 45709703 - 45709755
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||| |||||||||||||||||||||||||||||||||| ||  ||||||||    
T  45709703 ggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagc 45709755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 48772013 - 48771965
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatcccaagcca 48771965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 3175008 - 3174957
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  3175008 ggagagaatcgaacctgagacctcgagatggagcacactcccagatcccaag 3174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 7499922 - 7499973
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagcca 7499973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Complemental strand, 8108658 - 8108611
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  8108658 agaatcgaacctgagacctcaaggaggagcgcactcccatatcccaag 8108611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 15905672 - 15905722
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  15905672 gagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagcca 15905722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 37085547 - 37085598
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||||||| |||||||||||||  ||||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagcca 37085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 48079724 - 48079670
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||| |||||||||||||||| |||| ||||| |||| |||||||||||    
T  48079724 ggagagaatcaaacctgagacctcgagcaggaccacacacccaggtcccaagcca 48079670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 7721449 - 7721400
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| |||||||    
T  7721449 gagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaa 7721400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 11700245 - 11700192
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||| |||| || ||| |||||||    
T  11700245 gagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagcca 11700192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 18363776 - 18363735
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactccca 18363735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 23301599 - 23301648
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  23301599 agagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaag 23301648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 33222450 - 33222397
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||    
T  33222450 gagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagcca 33222397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 9608625 - 9608677
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||||||||| || ||||||||| |||||||||  |||||||||    
T  9608625 gagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcc 9608677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 9836197 - 9836249
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||||||||| || ||||||||| |||||||||  |||||||||    
T  9836197 gagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcc 9836249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 25590686 - 25590650
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||| |||||||||||||||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactccca 25590650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 26703196 - 26703152
Alignment:
Q  305 gaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||    
T  26703196 gaacctgagacctcgagaaggagcacactcccagatcccaagcca 26703152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 29916806 - 29916842
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacactc 29916842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 2883030 - 2882991
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  2883030 gagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 5579240 - 5579283
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| ||||||||||||||||| | |||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagcca 5579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 7801253 - 7801210
Alignment:
Q  303 tcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||| || |||||||||||||||| ||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaag 7801210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 13106778 - 13106817
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  13106778 gagagaatcgaacctgagaccttgaggaggagtacactcc 13106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 14058334 - 14058295
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14058334 ggagagaatcgaacctgagaccttgaggatgagcacactc 14058295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 14368362 - 14368323
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14368362 ggagagaatcgaacctgagaccttgaggatgagcacactc 14368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 15137633 - 15137594
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  15137633 gagagaatctaacctgagaccttgaggaggagcacactcc 15137594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 21558208 - 21558173
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcaca 331  Q
    |||||||||||||||||||||| |||||||||||||    
T  21558208 gagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 38374597 - 38374648
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| |||||| ||||||||||||||||  | |||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagcca 38374648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 41519260 - 41519299
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  41519260 gagagaagcgaacctgagaccttgaggaggagcacactcc 41519299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 2962539 - 2962501
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 27776243 - 27776201
Alignment:
Q  305 gaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||| |||||||||||||||||| || |||||||||    
T  27776243 gaacctgagacttcgaggaggagcacactctcaagtcccaagc 27776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 28236592 - 28236630
Alignment:
Q  311 gagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagcca 28236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 31835267 - 31835233
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactcc 31835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 5934197 - 5934148
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||| ||||| ||||||||||||||||||  ||||||||||    
T  5934197 gaatcgaacatgaaacctcaaggaggagcacactcccagatcccaagcca 5934148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 9183187 - 9183228
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| ||||||||||||||| | |||||||||||||||||||    
T  9183187 gagataatcgaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 17113875 - 17113834
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||| |||||||| |||||| ||||||||||||    
T  17113875 gagagaatcgaacttgagaccttgaggagaagcacactccca 17113834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 18056773 - 18056810
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactcc 18056810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 354 - 383
Target Start/End: Complemental strand, 21854579 - 21854550
Alignment:
Q  354 agccaataccatcaggccaacccaagtggg 383  Q
    ||||||||||||||||||||||||||||||    
T  21854579 agccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 29785300 - 29785349
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||| |||||||| ||||||||||||||| |||  |||||||||    
T  29785300 agaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcc 29785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 30579415 - 30579362
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||||||||||||||||| ||||||| | ||||||||| ||| |||||||    
T  30579415 gagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagcca 30579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 33869441 - 33869494
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||| ||| |||||||    
T  33869441 gagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagcca 33869494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 37473692 - 37473655
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  37473692 gagaatcgaacctgagacctcaaggaggagcaaactcc 37473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 49050489 - 49050538
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||||||||||||| |||||||| |||||| ||  ||||||||    
T  49050489 gagaatcgaacctgagacctcaaggaggagtacactcgcagatcccaagc 49050538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 4e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 16773887 - 16773837
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16773887 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaag 16773837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 14285241 - 14285188
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagcca 14285188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 25627137 - 25627084
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcca 25627084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 39327085 - 39327137
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  39327085 ggagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 84902 - 84849
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccatt 351  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagccatt 84849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 1410657 - 1410705
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactcccatatcccaag 1410705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 29075861 - 29075808
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||    
T  29075861 gagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagcca 29075808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 30109308 - 30109357
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagcca 30109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 34984886 - 34984833
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||| ||||||||||||||||||| || ||||||||    
T  34984886 gagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagcca 34984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 43442276 - 43442235
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  43442276 gagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 387
Target Start/End: Original strand, 8278270 - 8278353
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccattgaagccaataccatcaggccaacccaagtgggttaa 387  Q
    ||||| |||| ||| ||||| |||||||||||||||||||||| |||||         |||||||||||||||| ||||||||||||||||||    
T  8278270 ggagataatcaaacttgagatctcgaggaggagcacactcccaagtccc---------aagccaataccatcagaccaacccaagtgggttaa 8278353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 9842836 - 9842892
Alignment:
Q  290 tcataggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||| ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||    
T  9842836 tcatcggagagatttgaacccgagacctcgaggaggagcacactcccaagtcccaag 9842892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 4793094 - 4793133
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaa 4793133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 14495800 - 14495851
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||| || |||||||||||||||||||||||||||||  |||||||    
T  14495800 ggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaag 14495851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 30883196 - 30883247
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| |||| |||||||| ||||||||||||||||||| |||||||||||    
T  30883196 gagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagcca 30883247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 25979255 - 25979209
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||||    
T  25979255 cataagagagaatcgaacctgagaccttgaggaggagaacactccca 25979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 17028264 - 17028309
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  17028264 gaatcaaacctgagaccttgaggaggagcacactcccaagtcccaa 17028309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 21589364 - 21589315
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||| |||||||| |||| ||||||| |||||||||||    
T  21589364 gaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagcca 21589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 35982765 - 35982716
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  35982765 agaatcgaacctgagacatcgtagaggagcacactctcatgtcccaagcc 35982716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 22020857 - 22020909
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||||| ||||||| || ||||||||||||||||||  ||||||||    
T  22020857 ggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagc 22020909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 35360084 - 35360120
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35360084 gagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 8779306 - 8779345
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  8779306 gagataatcgaacctgaaacctcgaggaggagcacactcc 8779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 16457888 - 16457837
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| |||| |||||||| ||||||||||||||||| | |||||||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagcca 16457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 29173570 - 29173531
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  29173570 gagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37258362 - 37258401
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  37258362 gagagaatcgaacctgaaaccttgaggaggagcacactcc 37258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 12883921 - 12883879
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||    
T  12883921 ggagagaattgaacatgagacctcaaggaggagcacactccca 12883879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 87423 - 87460
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactccca 87460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 3315293 - 3315256
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactcc 3315256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 5390853 - 5390882
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcac 330  Q
    ||||||||||||||||||||||||||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac 5390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 6844809 - 6844768
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| |||||||||| ||||||||||||||| ||||||||||    
T  6844809 gagataatcgaaccttagacctcgaggaggaacacactccca 6844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 7918465 - 7918518
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||| |||||||||  |||||||| || ||||||||    
T  7918465 gagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagcca 7918518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 15485420 - 15485468
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| ||| ||||||||||||| | |||||||||||    
T  15485420 gaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagcca 15485468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 327
Target Start/End: Original strand, 17675759 - 17675788
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggag 327  Q
    ||||||||||||||||||||||||||||||    
T  17675759 gagaatcgaacctgagacctcgaggaggag 17675788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 18595997 - 18596050
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||||| |||||| ||||||||||||| ||||| ||| |||||||    
T  18595997 gagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagcca 18596050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 21549133 - 21549186
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||| |||||| |  |||||||||||||||||| |||||||||||    
T  21549133 gagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagcca 21549186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 22737158 - 22737109
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||| | | ||||||||||||| ||| |||||||||||    
T  22737158 gaatcgaacctgagacattggggaggagcacacttccaagtcccaagcca 22737109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 26078047 - 26078096
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||||||||||| || ||| |||| ||||||| |||||||    
T  26078047 gagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaa 26078096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 27841015 - 27841052
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  27841015 gagagaatcgaaccggagatctcgaggaggagcacact 27841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 30000196 - 30000143
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| ||||||||||||||||||||||| ||| ||||||   ||||||||||    
T  30000196 gagagagtcgaacctgagacctcgaggaggtgcatactcccggatcccaagcca 30000143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 36958118 - 36958159
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  36958118 gagagaatcgaacctgagacttcgatgaggaacacactccca 36958159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 11608 - 11555
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 11555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 19238575 - 19238655
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccattgaagccaataccatcaggccaacccaagtgggttaa 387  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||         |||||||||||| ||||||||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtccc---------aagccaataccaccaggccaacccaagtgggttaa 19238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 23378036 - 23377983
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcca 23377983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 37109347 - 37109400
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcca 37109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 39509148 - 39509095
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccatt 39509095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 46295175 - 46295124
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagcca 46295124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 49576889 - 49576943
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  49576889 ggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagcca 49576943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 2622391 - 2622444
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  2622391 gagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagcca 2622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 7949450 - 7949503
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  7949450 gagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagcca 7949503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 13015507 - 13015454
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagcca 13015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 37274455 - 37274508
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  37274455 gagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagcca 37274508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 55427198 - 55427249
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagcca 55427249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 31759657 - 31759707
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagcca 31759707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 7292794 - 7292847
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| | ||||||||||||||||||| || ||||||||    
T  7292794 gagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagcca 7292847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 30938217 - 30938254
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactcc 30938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 38869844 - 38869795
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcca 38869795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 46329241 - 46329192
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 351
Target Start/End: Original strand, 2185027 - 2185083
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagccatt 351  Q
    ||||||||||||||||||||| | ||| ||||||||||||||| || ||||||||||    
T  2185027 ggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccatt 2185083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 8030204 - 8030252
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  8030204 gaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcc 8030252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 19680784 - 19680835
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  19680784 gagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagc 19680835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 32992690 - 32992639
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagcca 32992639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 37720212 - 37720263
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||| ||||| ||||||| ||||||||||| |||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagcca 37720263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 51954195 - 51954144
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||| |||| |||||||||||||||||||||||| ||||||| ||||||||    
T  51954195 ggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaag 51954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 17618362 - 17618308
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||| ||||| |||||||||||||||||||||||||||| ||| |||||||    
T  17618362 ggagggaaacgaacatgagacctcgaggaggagcacactcccaggtctcaagcca 17618308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 346
Target Start/End: Complemental strand, 24827897 - 24827855
Alignment:
Q  304 cgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaag 24827855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 28635776 - 28635726
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  28635776 gagagaatcgaacctaagacctccaggaggagcacactcccagatcccaag 28635726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 12798764 - 12798723
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  12798764 gagagaatcgaacctgaaacctcgaggagcagcacactccca 12798723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 19229206 - 19229239
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcaca 331  Q
    ||||||||||||||||||||||||||||||||||    
T  19229206 gagaatcgaacctgagacctcgaggaggagcaca 19229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 24234725 - 24234672
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||||||||  |||| ||||||||||||| |||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagcca 24234672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 4249257 - 4249205
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||| |||||||||||| ||||||||||||||||| |  |||||||||    
T  4249257 gagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcc 4249205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 8306565 - 8306513
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    ||||||||||||| | |||| ||||||||||||||||||||| ||| ||||||    
T  8306565 gagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaagcc 8306513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 9936959 - 9937007
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9936959 gagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaag 9937007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 47044795 - 47044759
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactc 47044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 51948561 - 51948521
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  51948561 ggagagaattgaacctgagacctcgaggaggggcacactcc 51948521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 37980146 - 37980196
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| || |||||||||||||| | |||||||||||    
T  37980146 gagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagcca 37980196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 43623441 - 43623480
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactccc 336  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  43623441 agagaatcgaacctgagacttcaaggaggagcacactccc 43623480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 51622565 - 51622526
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  51622565 gagagagtcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 52254399 - 52254450
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||| ||||||| ||||| ||||||||||||||| ||| |||||||    
T  52254399 ggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaag 52254450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 56410028 - 56409978
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||||    
T  56410028 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagcca 56409978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 11592149 - 11592199
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||| |||||||||| |||||| |||||||||||||||| || ||||||||    
T  11592149 gagataatcgaacctaagacctggaggaggagcacactctcaggtcccaag 11592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 41346962 - 41347000
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  41346962 agaatcgaacctgagacttcgaggaggagcatactccca 41347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 7539670 - 7539629
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  7539670 gagagaatcgaacctgagaccttgagaaggagcatactccca 7539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 9241069 - 9241102
Alignment:
Q  353 aagccaataccatcaggccaacccaagtgggtta 386  Q
    |||||||||||| |||||||||||||||||||||    
T  9241069 aagccaataccaccaggccaacccaagtgggtta 9241102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 16581773 - 16581720
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||| ||||||||||||| ||||||||||| ||||||| || ||||||||    
T  16581773 gagataatagaacctgagaccttgaggaggagcagactcccaggttccaagcca 16581720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 19531998 - 19532051
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| | ||  ||||||||||| |||| |||||||||||||    
T  19531998 gagagaatcgaacctgaaaacttaaggaggagcacgctcctatgtcccaagcca 19532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 21660140 - 21660181
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| |||||||| |||||||||||||| |||||||||||||    
T  21660140 gagataatcgaacttgagacctcgaggaagagcacactccca 21660181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 21668904 - 21668945
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||| |||||||| |||||||||||||| |||||||||||||    
T  21668904 gagataatcgaacttgagacctcgaggaagagcacactccca 21668945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 33632132 - 33632185
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||| ||||| ||||||||||| |||||||| | ||||||||    
T  33632132 gagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagcca 33632185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 44865366 - 44865333
Alignment:
Q  353 aagccaataccatcaggccaacccaagtgggtta 386  Q
    ||||||| ||||||||||||||||||||||||||    
T  44865366 aagccaacaccatcaggccaacccaagtgggtta 44865333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 49262682 - 49262731
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||||||||||||||||| |  |||||||||||| || |||||||||    
T  49262682 gagaatcgaacctgagacctcaacaaggagcacactctcaagtcccaagc 49262731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 53496957 - 53496908
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||| || ||||||| | ||||||||||||||||||| |||||||    
T  53496957 gagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaa 53496908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 21547476 - 21547529
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  21547476 gagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagcca 21547529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 6122870 - 6122822
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6122870 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcc 6122822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 12370244 - 12370192
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    |||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  12370244 ggagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 15786317 - 15786369
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcca 15786369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 31383795 - 31383847
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagcca 31383847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 7219915 - 7219962
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtccca 344  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7219915 agagaatcgaacctgagacttcgaggaggagcacactctcatgtccca 7219962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 12587351 - 12587312
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12587351 ggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 3266004 - 3265954
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaag 3265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 2799942 - 2799901
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactccca 2799901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 4566628 - 4566575
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||  ||||||||||||||||||| || ||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagcca 4566575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 8177178 - 8177231
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| |||| |||||||||||||||||||  ||||||||||    
T  8177178 gagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagcca 8177231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 9165191 - 9165244
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| ||||||||||| | ||||||||||||||||||| |||||||||||    
T  9165191 gagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagcca 9165244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 10526903 - 10526850
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  10526903 gagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagcca 10526850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 17745252 - 17745305
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||||||||||    
T  17745252 gagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagcca 17745305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 33700769 - 33700810
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactccca 33700810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 36371550 - 36371497
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||| ||||||||||||||||||| || ||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagcca 36371497  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 50901662 - 50901609
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||  |||||||||||||||||||||||| ||| |||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagcca 50901609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 24047100 - 24047151
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||| |||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagcca 24047151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 51814575 - 51814536
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  51814575 ggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 52116779 - 52116830
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| ||||||||||| | ||||||||||||||||||| |||||||||||    
T  52116779 gagaattgaacctgagacattgaggaggagcacactcccaagtcccaagcca 52116830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 2220053 - 2220015
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2220053 ggagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 8904494 - 8904444
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||||||    
T  8904494 gagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaag 8904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 15065036 - 15064961
Alignment:
Q  305 gaacctgagacctcgaggaggagcacactcccatgtcccaagccattgaagccaataccatcaggccaacccaagtgggtta 386  Q
    ||||||||||||| ||||| |||||||||| || |||| |||      ||||||||| ||||||||||||||||||||||||    
T  15065036 gaacctgagaccttgaggatgagcacactctcaggtcctaag------aagccaatatcatcaggccaacccaagtgggtta 15064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 16893475 - 16893433
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||| ||||||||||||||||||||||||||| |||||||||    
T  16893475 ggagaaaatcgaacctgagacctcgaggaggagtacactccca 16893433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 17439998 - 17439956
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  17439998 ggagagaatcaaacatgagacctcgaggaggagcacactccca 17439956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 38947471 - 38947509
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactccca 38947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 40257476 - 40257426
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||| |||| |||||||||||||||||||||||||||| ||| |||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagcca 40257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 1247193 - 1247152
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactccca 1247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 9117196 - 9117147
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||||||||| |||||||||||||| |||  |||||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacacttccagatcccaagcc 9117147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 18459227 - 18459280
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| || || ||||||| |||||||||||||||||| |||||||||||    
T  18459227 gagagaatcaaatctaagacctcaaggaggagcacactcccaagtcccaagcca 18459280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 21267989 - 21268042
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||||  |||||| ||||||||||||||||||| |||||||||||    
T  21267989 gagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagcca 21268042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 27476767 - 27476820
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| ||| ||||| |||||||||||||||||||| | |||||||||||    
T  27476767 gagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagcca 27476820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 12259338 - 12259290
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||| |||||| |||||||||||||||||||||  |||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaag 12259290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 346
Target Start/End: Original strand, 16169976 - 16170024
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||||||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaag 16170024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 19528325 - 19528361
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactc 19528361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 44126475 - 44126427
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtccca 344  Q
    ||||||||| || ||||||||||| ||||||||||||||||| ||||||    
T  44126475 gagagaatcaaatctgagacctcgtggaggagcacactcccaggtccca 44126427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 952589 - 952538
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||| |||||||||| | ||||| ||||||||||||| |||||||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagcca 952538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 4825049 - 4824998
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||| |||||||||||| || |||||||||||||| | |||||||||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagcca 4824998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 26232356 - 26232395
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  26232356 ggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 31605846 - 31605897
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||||| ||||||||||||||| | | |||||||||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagcca 31605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 43446041 - 43445990
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||| |||||||| ||||||||||||||||| | | |||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagcca 43445990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 18037608 - 18037658
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||| ||||| |||||  ||||||||||||||| |||||||    
T  18037608 ggagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcccaa 18037658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 44961845 - 44961807
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  44961845 gagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 51013121 - 51013175
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||  |||  ||||||||| ||||| ||||||||||||||||||||||    
T  51013121 ggagagaatctgaccgaagacctcgaagaggatcacactcccatgtcccaagcca 51013175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 51281432 - 51281394
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  51281432 ggagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 6650675 - 6650622
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| | ||||||||||| ||||||   ||||||||||    
T  6650675 gagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagcca 6650622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 10150865 - 10150914
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||| ||||||||||| | ||||||||| ||||||||| |||||||    
T  10150865 gagagaattgaacctgagactttgaggaggagtacactcccaagtcccaa 10150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 11063636 - 11063583
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| |||||| |||||||| ||||||  || |||||||||||    
T  11063636 gagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagcca 11063583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 12662362 - 12662325
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  12662362 gagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 17297062 - 17297013
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagc 347  Q
    ||||||| ||| |||||||| ||||||||||||||||| | |||||||||    
T  17297062 gagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 30420390 - 30420337
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| ||||||||||||  | ||||||||||||||||| || ||||||||||    
T  30420390 gagagattcgaacctgagatgttgaggaggagcacactcctatatcccaagcca 30420337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 31794276 - 31794313
Alignment:
Q  312 agacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagcca 31794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 40810547 - 40810506
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||||| || ||||| ||||||||||    
T  40810547 gagagaatcgaacctgagaccttgaagaggaacacactccca 40810506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 45266912 - 45266875
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  45266912 gagaatcgaacctgagaccttgaggaggagcaaactcc 45266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 51703859 - 51703818
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||| || | |||||||||||||||||||    
T  51703859 gagagaatcgaacctgaaactttgaggaggagcacactccca 51703818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 52029935 - 52029972
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactcc 52029972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 52336770 - 52336823
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||||||||| ||  ||||||||||||||||||  ||||||||||    
T  52336770 gagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagcca 52336823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 6e-16; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 39715070 - 39715022
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaag 39715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 42327392 - 42327444
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagcca 42327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 4262297 - 4262351
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  4262297 ggagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagcca 4262351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 7799030 - 7799084
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  7799030 ggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagcca 7799084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 21213847 - 21213796
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagcca 21213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 23052521 - 23052572
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagcca 23052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 29503349 - 29503302
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaa 29503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 37480153 - 37480102
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagcca 37480102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 33839259 - 33839305
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  33839259 agaattgaacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 11251167 - 11251114
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||    
T  11251167 gagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagcca 11251114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 28846766 - 28846721
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaag 28846721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 33569854 - 33569907
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||    
T  33569854 gagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagcca 33569907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 33582053 - 33582004
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  33582053 gagagaatcgaacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 21195676 - 21195724
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcc 348  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||    
T  21195676 gaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcc 21195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 19016109 - 19016058
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||| |||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagcca 19016058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 21939121 - 21939172
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||| ||||||||||||||||||| || |||| ||||||    
T  21939121 gagaatcgaacctgagatctcgaggaggagcacactctcaagtccaaagcca 21939172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 12086124 - 12086178
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||||| ||||||| ||||||||||||||| ||| |||||||||||    
T  12086124 ggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagcca 12086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 19244189 - 19244139
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||||||||||||||| | |||||||||||||| || ||||||||    
T  19244189 gagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaag 19244139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 23140907 - 23140961
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||    
T  23140907 ggagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcca 23140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 23552697 - 23552751
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||    
T  23552697 ggagagaatcgaaccagagacattgaggaggaacacacacccatgtcccaagcca 23552751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 25637232 - 25637190
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  25637232 ggagagaaccgaacctgagacctcgagaaggagcacactccca 25637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 32687558 - 32687512
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactctcaagtcccaa 32687512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 42602635 - 42602581
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||| ||||| |||||| ||| ||||||||||||||| |||||||||||    
T  42602635 ggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagcca 42602581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 42860424 - 42860378
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaag 42860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 42922495 - 42922441
Alignment:
Q  296 gagagaatcgaacctgagacctc-gaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||| || ||||||||    
T  42922495 gagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagcca 42922441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 1729896 - 1729843
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| || || |||||| ||||||||||||||||||| |||||||||||    
T  1729896 gagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagcca 1729843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 11062440 - 11062387
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||| |||||||||||| |||||| |||||||||||| || ||||||||    
T  11062440 gagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagcca 11062387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 13803575 - 13803522
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||||||||||||||||| ||||||||||||||||| | ||| |||||||    
T  13803575 gagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagcca 13803522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 14500357 - 14500316
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  14500357 gagagaatcgaatctgagacctagaggaggagcacactccca 14500316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 27244387 - 27244339
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||||||||| | |||||||||||||||| ||||||| |||||||    
T  27244387 agagaatcgaaccttaaacctcgaggaggagcatactcccaggtcccaa 27244339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 3661004 - 3661051
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtccc 343  Q
    ||||||||||||||||||| |||||||||| |||||||| || |||||    
T  3661004 gagagaatcgaacctgagatctcgaggaggggcacactctcaggtccc 3661051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 6099517 - 6099567
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| || |||||||||||||| | |||||||||||    
T  6099517 gagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagcca 6099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 349
Target Start/End: Complemental strand, 26482170 - 26482120
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||||    
T  26482170 gagaatcgaacctgagaccttgag-aggagcacactcctaggtcccaagcca 26482120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 29197375 - 29197422
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||||||||| |||||| || |||||||||||||||||| ||||||||    
T  29197375 agaatcgaacatgagacatcaaggaggagcacactcccaagtcccaag 29197422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 30907619 - 30907674
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    |||| |||| ||| |||| |||||| ||||||||||||||||||||| ||||||||    
T  30907619 cataagagaaaattgaacatgagacgtcgaggaggagcacactcccaagtcccaag 30907674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 6859308 - 6859350
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccat 338  Q
    |||||||||||||||||||| | || |||||||||||||||||    
T  6859308 gagagaatcgaacctgagactttgaagaggagcacactcccat 6859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 7667468 - 7667518
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||| || |||| ||| |||||||||||||||||| |||||||||||    
T  7667468 agaatcgagccggagatctcaaggaggagcacactcccaagtcccaagcca 7667518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 12994376 - 12994422
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||| ||||||||  |||||||||||||||||| ||||||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaag 12994422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 37755974 - 37756020
Alignment:
Q  303 tcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||| |||||||||||| ||||||||| ||||| |||||||||||    
T  37755974 tcgaacttgagacctcgagtaggagcacattcccaggtcccaagcca 37756020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 40416386 - 40416436
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||||||||||||  |||||||||| ||||||| || |||||    
T  40416386 gagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaag 40416436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 41504931 - 41504985
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||| | ||||  ||||||||||||| ||||||| |||||||||||    
T  41504931 ggagagaatcgaatcggagatatcgaggaggagcatactcccaggtcccaagcca 41504985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 7599978 - 7600015
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactc 7600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 16525210 - 16525177
Alignment:
Q  353 aagccaataccatcaggccaacccaagtgggtta 386  Q
    ||||||| ||||||||||||||||||||||||||    
T  16525210 aagccaacaccatcaggccaacccaagtgggtta 16525177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 16918574 - 16918615
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||| ||||| |||||| |||||||||||||||||||    
T  16918574 gagagaatccaacctaagaccttgaggaggagcacactccca 16918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 19322848 - 19322799
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    ||||||||| |||| ||||||| || |||||||||||||||| |||||||    
T  19322848 gagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaa 19322799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 30410545 - 30410598
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| |||||||| |||| ||| ||||||||||||||||| | |||||||||||    
T  30410545 gagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagcca 30410598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 31573638 - 31573675
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| || |||||||||||||||    
T  31573638 agagaatcgaacctgagacatcaaggaggagcacactc 31573675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 13041 - 13083
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  13041 ggagagaatcgaacctgagaccttgaggaggagcacactccca 13083  T

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Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 836 - 889
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||| ||||||||||||||| |||||  ||||||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagcca 889  T

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Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 19958 - 20011
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  19958 gagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagcca 20011  T

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Target: scaffold0291 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 2468 - 2507
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactccca 337  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactccca 2507  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 49387 - 49333
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||  ||||||||||    
T  49387 ggagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaagcca 49333  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 25343 - 25396
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||||||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  25343 gagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagcca 25396  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 94967 - 95020
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| || ||||||||    
T  94967 gagataattgaacctgagaccttgaggaggagcacactcccaggttccaagcca 95020  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.00000003; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 2707 - 2746
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  2707 gagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

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Target: scaffold0238; HSP #2
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 5273 - 5220
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    ||||||||||||||| | || |  |||||||||||||||||| |||||||||||    
T  5273 gagagaatcgaacctaaaactttaaggaggagcacactcccaagtcccaagcca 5220  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 6921 - 6968
Alignment:
Q  302 atcgaacctgagacctcgaggaggagcacactcccatgtcccaagcca 349  Q
    |||||||||||||| | ||||||||||||||||||  |||||||||||    
T  6921 atcgaacctgagactttgaggaggagcacactccccagtcccaagcca 6968  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 41629 - 41667
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  41629 gagagaattgaacctgagacctcgaggaggagcatactc 41667  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 45755 - 45805
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcccatgtcccaag 346  Q
    ||||||||||||| ||||||||| ||||||| |||||||| | ||||||||    
T  45755 gagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaag 45805  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 145913 - 145958
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcccatgtcccaa 345  Q
    |||||||| ||||||||||||| ||||||||||||| | |||||||    
T  145913 gaatcgaatctgagacctcgagaaggagcacactcctaggtcccaa 145958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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