View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18178_high_117 (Length: 257)
Name: NF18178_high_117
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18178_high_117 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 23 - 241
Target Start/End: Original strand, 37494727 - 37494945
Alignment:
| Q |
23 |
aggcacaatatttggataccgcaaaggaaaaataaatttttgcattcaatcaaatgcaaactccactaccccaattctccttctagaattagcagtacca |
122 |
Q |
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| T |
37494727 |
aggcacaatatttggataccgcaaaggaaaaataagtttttgcattcaatcaaatgcaaactccactaccccaattctccttctagaattagcagtacca |
37494826 |
T |
|
| Q |
123 |
gcaaacattttagcgagggaaatgcgaggaggaacattgagaatcgcattagagagtagcagtgacaatggaagaagattttcttcgcttttgtcgacgc |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37494827 |
gcaaacattttagcgagggaaatgcgaggaggaacattgagaatcgcattagagagtagcagtgacaatggaagaagattttcttcgcttttgtcgacgc |
37494926 |
T |
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| Q |
223 |
cattttggactatgtactg |
241 |
Q |
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||||||||||||||||||| |
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| T |
37494927 |
cattttggactatgtactg |
37494945 |
T |
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