View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18178_high_128 (Length: 247)
Name: NF18178_high_128
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18178_high_128 |
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Alignment Details
Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 14396279 - 14396411
Alignment:
| Q |
13 |
gaaaggaaacttgaattcttaacataaaatccaaacacatccaatagttgttgaacatgattaagatggagcttcagactaacagatagatgtcttgcca |
112 |
Q |
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| T |
14396279 |
gaaaggaaacttgaattcttaacataaaatccaaacacatccaatagttgttgaacatgattaagatggagcttcagactaacagatagatgtcttgcca |
14396378 |
T |
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| Q |
113 |
caatgnnnnnnntggaatttggagagtaaatcag |
146 |
Q |
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| T |
14396379 |
caatg-aaaaaatggaatttggagagtaaatcag |
14396411 |
T |
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