View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18178_high_159 (Length: 215)
Name: NF18178_high_159
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18178_high_159 |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 24733805 - 24733623
Alignment:
| Q |
17 |
aaggagtacaggcaactgatgctatacaatagaaatggtagactagcaatagcatatcatatcatggctaagacttaatctaaactgagttacttggagt |
116 |
Q |
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| T |
24733805 |
aaggagtacatgcaactgatgctatacaatagaaatggtagactagcaatagcatatcatatcatggctaagacttaatctaaactgagttacttggagt |
24733706 |
T |
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| Q |
117 |
ctaagctatctaaatcactattgttatgtaatactattaaacaacaaattaggaagaaacgtaaatgcaaaatatcaactaag |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24733705 |
ctaagctatctaaatcactattgttatgtaatactattaaacaacaaattaggaagaaacgtaaatgcaaaatatcaactaag |
24733623 |
T |
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