View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_high_4 (Length: 893)

Name: NF18178_high_4
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_high_4
NF18178_high_4
[»] chr4 (75 HSPs)
chr4 (131-887)||(41930512-41931254)
chr4 (226-703)||(51686157-51686635)
chr4 (196-473)||(30708171-30708459)
chr4 (701-887)||(10730086-10730272)
chr4 (701-887)||(10943855-10944041)
chr4 (272-587)||(50904483-50904800)
chr4 (701-887)||(51685914-51686100)
chr4 (518-703)||(55278613-55278798)
chr4 (491-703)||(71980-72195)
chr4 (734-879)||(71724-71869)
chr4 (729-878)||(30706692-30706841)
chr4 (512-703)||(10729814-10730008)
chr4 (512-703)||(10943583-10943777)
chr4 (517-697)||(40886456-40886636)
chr4 (739-879)||(50277941-50278081)
chr4 (493-699)||(14317656-14317865)
chr4 (491-703)||(8110194-8110409)
chr4 (734-879)||(13624658-13624803)
chr4 (739-887)||(50904142-50904290)
chr4 (701-879)||(8109938-8110116)
chr4 (701-879)||(44677076-44677254)
chr4 (701-882)||(14317393-14317574)
chr4 (488-703)||(50196373-50196591)
chr4 (21-96)||(41930377-41930452)
chr4 (536-703)||(11081483-11081653)
chr4 (780-887)||(46438847-46438954)
chr4 (758-877)||(50020835-50020954)
chr4 (739-879)||(40886760-40886900)
chr4 (499-699)||(21535045-21535248)
chr4 (485-703)||(46439063-46439277)
chr4 (497-703)||(12891955-12892158)
chr4 (488-703)||(50020494-50020712)
chr4 (528-647)||(40884752-40884870)
chr4 (503-703)||(21018397-21018606)
chr4 (503-703)||(30723546-30723755)
chr4 (604-703)||(13624448-13624547)
chr4 (701-879)||(21018684-21018862)
chr4 (758-879)||(37016734-37016855)
chr4 (273-385)||(12892261-12892373)
chr4 (509-703)||(1305945-1306148)
chr4 (509-703)||(6178615-6178818)
chr4 (612-703)||(40355340-40355431)
chr4 (136-205)||(14297084-14297153)
chr4 (136-205)||(14315333-14315402)
chr4 (755-879)||(30723909-30724033)
chr4 (755-879)||(40355563-40355687)
chr4 (509-703)||(31424783-31424986)
chr4 (761-879)||(21535368-21535486)
chr4 (612-703)||(49093465-49093556)
chr4 (509-587)||(44674656-44674734)
chr4 (503-703)||(49168554-49168763)
chr4 (755-879)||(6178950-6179074)
chr4 (755-879)||(31424527-31424651)
chr4 (623-703)||(41795973-41796053)
chr4 (739-879)||(41796169-41796309)
chr4 (755-879)||(49168298-49168422)
chr4 (503-587)||(50278301-50278385)
chr4 (757-879)||(1306284-1306406)
chr4 (503-587)||(37016409-37016493)
chr4 (755-879)||(49093208-49093332)
chr4 (136-183)||(46439650-46439697)
chr4 (668-703)||(50904397-50904432)
chr4 (136-214)||(72562-72640)
chr4 (653-703)||(50278197-50278247)
chr4 (638-703)||(44676933-44676998)
chr4 (169-205)||(9893331-9893367)
chr4 (764-820)||(12891758-12891814)
chr4 (493-545)||(13624331-13624383)
chr4 (317-381)||(40886235-40886299)
chr4 (136-183)||(10753503-10753550)
chr4 (136-183)||(10967272-10967319)
chr4 (136-182)||(10729341-10729387)
chr4 (136-182)||(10943110-10943156)
chr4 (503-589)||(41795844-41795930)
chr4 (136-185)||(55407867-55407916)
[»] chr5 (37 HSPs)
chr5 (275-698)||(15939692-15940115)
chr5 (226-703)||(38971084-38971575)
chr5 (226-506)||(36503194-36503485)
chr5 (226-703)||(42538836-42539325)
chr5 (704-879)||(15939432-15939607)
chr5 (491-699)||(40622804-40623015)
chr5 (701-887)||(38970820-38971006)
chr5 (739-879)||(38407974-38408114)
chr5 (758-887)||(42937787-42937916)
chr5 (739-879)||(5199554-5199694)
chr5 (739-878)||(7760125-7760264)
chr5 (755-879)||(511749-511873)
chr5 (739-879)||(8699556-8699696)
chr5 (491-703)||(5199803-5200024)
chr5 (430-703)||(42937406-42937670)
chr5 (745-874)||(42538585-42538714)
chr5 (136-248)||(15940220-15940333)
chr5 (604-703)||(8699342-8699440)
chr5 (701-887)||(8745-8931)
chr5 (503-703)||(8468-8677)
chr5 (509-703)||(38407662-38407865)
chr5 (511-703)||(30708090-30708291)
chr5 (194-280)||(42937280-42937367)
chr5 (485-576)||(511415-511506)
chr5 (612-703)||(8577462-8577553)
chr5 (509-703)||(28238544-28238747)
chr5 (760-847)||(40623144-40623231)
chr5 (739-820)||(8577669-8577750)
chr5 (503-703)||(28879641-28879850)
chr5 (623-703)||(19038097-19038177)
chr5 (739-879)||(19038293-19038433)
chr5 (755-820)||(28879444-28879509)
chr5 (511-587)||(7761711-7761787)
chr5 (755-879)||(28238879-28239003)
chr5 (755-808)||(30707905-30707958)
chr5 (503-589)||(8577344-8577430)
chr5 (136-205)||(19228712-19228782)
[»] chr2 (43 HSPs)
chr2 (136-619)||(25514490-25514975)
chr2 (273-703)||(7416825-7417261)
chr2 (701-879)||(7189600-7189778)
chr2 (711-887)||(36653598-36653774)
chr2 (701-879)||(29398697-29398875)
chr2 (701-879)||(39950281-39950459)
chr2 (559-680)||(20067329-20067450)
chr2 (491-587)||(6637885-6637981)
chr2 (739-879)||(10826041-10826181)
chr2 (741-879)||(40538326-40538464)
chr2 (734-879)||(7416569-7416714)
chr2 (226-381)||(15546997-15547163)
chr2 (505-703)||(36653303-36653510)
chr2 (503-703)||(28471571-28471782)
chr2 (142-205)||(7417403-7417466)
chr2 (509-703)||(30493772-30493975)
chr2 (491-703)||(40538568-40538786)
chr2 (509-703)||(43536515-43536718)
chr2 (517-703)||(43981564-43981759)
chr2 (757-882)||(28471312-28471437)
chr2 (499-587)||(39950656-39950744)
chr2 (612-703)||(5355014-5355105)
chr2 (760-882)||(20067607-20067729)
chr2 (623-704)||(29398539-29398620)
chr2 (755-864)||(43536850-43536959)
chr2 (512-703)||(10825732-10825932)
chr2 (755-879)||(15834043-15834167)
chr2 (739-879)||(17423253-17423393)
chr2 (755-879)||(30494107-30494231)
chr2 (755-879)||(45431292-45431416)
chr2 (509-703)||(15834299-15834502)
chr2 (755-879)||(43981308-43981432)
chr2 (623-690)||(39950544-39950611)
chr2 (136-183)||(40539183-40539230)
chr2 (247-281)||(7417264-7417298)
chr2 (509-570)||(3938350-3938411)
chr2 (755-804)||(5354833-5354882)
chr2 (503-587)||(29398410-29398494)
chr2 (648-703)||(17423509-17423564)
chr2 (147-214)||(31568639-31568706)
chr2 (503-589)||(17423620-17423706)
chr2 (648-698)||(45431553-45431603)
chr2 (136-205)||(4286032-4286101)
[»] chr7 (55 HSPs)
chr7 (273-703)||(41734771-41735204)
chr7 (226-413)||(37344862-37345055)
chr7 (229-513)||(11629854-11630148)
chr7 (409-699)||(37343297-37343590)
chr7 (701-879)||(37343037-37343215)
chr7 (739-888)||(34741506-34741655)
chr7 (701-878)||(16680247-16680424)
chr7 (701-878)||(17654483-17654660)
chr7 (701-863)||(5538643-5538805)
chr7 (516-694)||(17747511-17747689)
chr7 (491-703)||(47521770-47521991)
chr7 (766-878)||(11630418-11630530)
chr7 (739-879)||(13322821-13322961)
chr7 (739-847)||(27450817-27450925)
chr7 (701-856)||(47522069-47522224)
chr7 (491-703)||(47669999-47670217)
chr7 (509-703)||(34741764-34741958)
chr7 (491-703)||(16488416-16488631)
chr7 (733-879)||(36980347-36980493)
chr7 (739-828)||(41734610-41734699)
chr7 (739-879)||(10521617-10521757)
chr7 (491-703)||(36980601-36980804)
chr7 (739-879)||(17837747-17837887)
chr7 (759-864)||(9492010-9492115)
chr7 (273-385)||(17747275-17747387)
chr7 (759-879)||(47670353-47670473)
chr7 (787-878)||(11632680-11632771)
chr7 (491-703)||(27450484-27450701)
chr7 (503-703)||(5538356-5538565)
chr7 (491-703)||(16680502-16680717)
chr7 (491-703)||(17654738-17654953)
chr7 (509-703)||(9368213-9368416)
chr7 (509-703)||(17460073-17460276)
chr7 (509-703)||(17592938-17593141)
chr7 (509-703)||(41883583-41883786)
chr7 (509-703)||(48406401-48406604)
chr7 (509-698)||(35607202-35607400)
chr7 (503-703)||(15071088-15071297)
chr7 (503-703)||(17837996-17838205)
chr7 (755-879)||(42505080-42505204)
chr7 (612-703)||(42504857-42504948)
chr7 (755-879)||(15071429-15071553)
chr7 (273-381)||(16488749-16488857)
chr7 (491-575)||(9491784-9491868)
chr7 (755-879)||(17460408-17460532)
chr7 (755-879)||(17592682-17592806)
chr7 (755-879)||(35607537-35607661)
chr7 (755-879)||(41883327-41883451)
chr7 (755-879)||(48406145-48406269)
chr7 (612-703)||(10521873-10521964)
chr7 (516-586)||(22726568-22726638)
chr7 (618-703)||(22726642-22726727)
chr7 (755-879)||(9368548-9368672)
chr7 (483-680)||(5395022-5395219)
chr7 (491-577)||(19801672-19801758)
[»] chr3 (70 HSPs)
chr3 (248-587)||(42759805-42760154)
chr3 (229-690)||(11380565-11381033)
chr3 (248-573)||(18751920-18752248)
chr3 (701-879)||(20353328-20353506)
chr3 (488-703)||(48891560-48891778)
chr3 (701-879)||(17562431-17562609)
chr3 (734-879)||(50758886-50759031)
chr3 (739-887)||(48565655-48565803)
chr3 (733-879)||(44232505-44232651)
chr3 (739-879)||(41615056-41615195)
chr3 (739-876)||(49266495-49266632)
chr3 (739-879)||(42759449-42759589)
chr3 (491-703)||(44232754-44232969)
chr3 (734-879)||(48891304-48891449)
chr3 (372-685)||(12373761-12374083)
chr3 (741-887)||(9473058-9473204)
chr3 (491-703)||(20353584-20353799)
chr3 (740-887)||(42805088-42805235)
chr3 (739-887)||(36130264-36130412)
chr3 (739-879)||(47071306-47071446)
chr3 (701-879)||(2272144-2272322)
chr3 (739-879)||(6927918-6928058)
chr3 (485-704)||(6928167-6928389)
chr3 (734-887)||(30253215-30253368)
chr3 (739-879)||(599654-599794)
chr3 (739-879)||(50214286-50214426)
chr3 (526-703)||(599910-600087)
chr3 (739-864)||(4005537-4005661)
chr3 (739-820)||(52388724-52388805)
chr3 (503-702)||(2648377-2648585)
chr3 (503-704)||(4005215-4005422)
chr3 (491-587)||(16861565-16861661)
chr3 (509-703)||(50477584-50477787)
chr3 (509-703)||(54389168-54389371)
chr3 (534-660)||(12672529-12672655)
chr3 (759-879)||(16646294-16646414)
chr3 (505-703)||(30252898-30253104)
chr3 (491-587)||(41615417-41615513)
chr3 (509-703)||(34048468-34048671)
chr3 (509-703)||(42900967-42901170)
chr3 (531-703)||(17562171-17562353)
chr3 (503-587)||(16646663-16646747)
chr3 (485-587)||(48565982-48566084)
chr3 (503-703)||(2271857-2272066)
chr3 (510-703)||(49266177-49266379)
chr3 (503-587)||(47070987-47071071)
chr3 (491-703)||(42804753-42804971)
chr3 (509-703)||(46698122-46698325)
chr3 (509-703)||(50213974-50214177)
chr3 (645-703)||(52388550-52388608)
chr3 (248-301)||(49195081-49195134)
chr3 (488-564)||(26334765-26334841)
chr3 (755-879)||(42901302-42901426)
chr3 (739-879)||(46401492-46401632)
chr3 (623-703)||(46401748-46401828)
chr3 (503-587)||(52388414-52388498)
chr3 (503-699)||(9473326-9473528)
chr3 (136-214)||(48892181-48892259)
chr3 (755-879)||(46698457-46698581)
chr3 (509-589)||(49141337-49141417)
chr3 (755-879)||(50477919-50478043)
chr3 (136-183)||(6928815-6928862)
chr3 (604-693)||(18751794-18751883)
chr3 (755-804)||(54388987-54389036)
chr3 (655-703)||(16646538-16646586)
chr3 (755-879)||(49141660-49141784)
chr3 (136-214)||(11380378-11380457)
chr3 (136-183)||(18752340-18752387)
chr3 (503-570)||(36130655-36130722)
chr3 (648-703)||(41615304-41615359)
[»] chr1 (54 HSPs)
chr1 (273-703)||(11196905-11197335)
chr1 (273-703)||(38119745-38120173)
chr1 (226-483)||(23272944-23273216)
chr1 (226-385)||(16269312-16269471)
chr1 (702-879)||(38120252-38120429)
chr1 (494-703)||(51336947-51337159)
chr1 (701-887)||(47505119-47505305)
chr1 (701-879)||(11196649-11196827)
chr1 (739-879)||(22526789-22526929)
chr1 (701-879)||(47660659-47660837)
chr1 (701-865)||(45828377-45828540)
chr1 (734-882)||(49855142-49855290)
chr1 (485-703)||(45828618-45828839)
chr1 (701-879)||(52804654-52804832)
chr1 (739-879)||(19522401-19522541)
chr1 (739-879)||(31780784-31780924)
chr1 (503-699)||(19522092-19522288)
chr1 (491-703)||(22527037-22527258)
chr1 (505-702)||(47660916-47661116)
chr1 (739-873)||(95219-95353)
chr1 (743-838)||(21143764-21143859)
chr1 (503-703)||(35256217-35256420)
chr1 (491-703)||(47505383-47505604)
chr1 (508-703)||(23273217-23273415)
chr1 (604-703)||(49854932-49855031)
chr1 (509-703)||(21143972-21144175)
chr1 (503-703)||(13636805-13637014)
chr1 (503-703)||(31780472-31780675)
chr1 (509-703)||(26878752-26878955)
chr1 (503-703)||(19159063-19159272)
chr1 (755-887)||(13637146-13637278)
chr1 (710-802)||(16269892-16269984)
chr1 (739-847)||(19158839-19158947)
chr1 (509-703)||(3729154-3729357)
chr1 (604-703)||(16269706-16269805)
chr1 (491-587)||(94904-94997)
chr1 (137-214)||(35255761-35255839)
chr1 (144-205)||(5750290-5750351)
chr1 (503-703)||(52804910-52805119)
chr1 (485-601)||(17513294-17513410)
chr1 (612-703)||(50617816-50617907)
chr1 (491-571)||(16269587-16269667)
chr1 (152-205)||(5750962-5751015)
chr1 (648-703)||(95055-95110)
chr1 (144-214)||(47661525-47661595)
chr1 (517-587)||(50617711-50617781)
chr1 (485-562)||(470574-470651)
chr1 (248-281)||(11197338-11197371)
chr1 (778-879)||(26878503-26878604)
chr1 (491-575)||(49854813-49854897)
chr1 (710-772)||(50617994-50618056)
chr1 (755-808)||(3729489-3729542)
chr1 (508-589)||(8548255-8548336)
chr1 (144-193)||(51337592-51337641)
[»] chr8 (56 HSPs)
chr8 (226-617)||(5300838-5301244)
chr8 (430-703)||(45132782-45133054)
chr8 (701-879)||(45132526-45132704)
chr8 (273-413)||(45133042-45133182)
chr8 (485-703)||(34819403-34819624)
chr8 (710-879)||(21176414-21176583)
chr8 (711-879)||(5679648-5679816)
chr8 (701-879)||(34819702-34819880)
chr8 (491-703)||(30761071-30761286)
chr8 (739-879)||(39831873-39832013)
chr8 (485-699)||(35554635-35554852)
chr8 (733-879)||(51869-52015)
chr8 (488-703)||(52125-52343)
chr8 (710-878)||(34367711-34367879)
chr8 (739-887)||(40075823-40075971)
chr8 (741-879)||(5301439-5301577)
chr8 (739-879)||(35554382-35554522)
chr8 (492-703)||(20859056-20859270)
chr8 (701-878)||(39604076-39604252)
chr8 (485-699)||(40075493-40075710)
chr8 (464-687)||(22500904-22501130)
chr8 (754-879)||(41243210-41243335)
chr8 (701-879)||(20858800-20858978)
chr8 (136-214)||(45133330-45133408)
chr8 (491-703)||(39831544-39831765)
chr8 (758-878)||(43214191-43214311)
chr8 (740-823)||(30761417-30761500)
chr8 (604-702)||(5679905-5680003)
chr8 (509-703)||(1055569-1055772)
chr8 (509-703)||(23019098-23019301)
chr8 (509-703)||(26662490-26662693)
chr8 (612-703)||(43214427-43214518)
chr8 (505-673)||(12716091-12716261)
chr8 (503-703)||(15033570-15033779)
chr8 (398-575)||(21176045-21176219)
chr8 (488-587)||(41239344-41239443)
chr8 (517-703)||(486552-486747)
chr8 (755-879)||(15033911-15034035)
chr8 (503-587)||(34367429-34367513)
chr8 (509-703)||(42482317-42482520)
chr8 (136-214)||(35555229-35555307)
chr8 (398-471)||(5680120-5680193)
chr8 (638-703)||(41243033-41243098)
chr8 (755-879)||(22642-22766)
chr8 (755-879)||(1055313-1055437)
chr8 (755-879)||(23019433-23019557)
chr8 (755-879)||(26662234-26662358)
chr8 (144-214)||(38331094-38331164)
chr8 (623-703)||(22430-22510)
chr8 (755-879)||(42482652-42482776)
chr8 (653-703)||(5301271-5301321)
chr8 (755-804)||(486879-486928)
chr8 (248-281)||(45133185-45133218)
chr8 (174-212)||(23022347-23022385)
chr8 (136-214)||(35555489-35555567)
chr8 (136-205)||(40075070-40075139)
[»] chr6 (37 HSPs)
chr6 (279-587)||(2405634-2405946)
chr6 (273-577)||(2407396-2407698)
chr6 (248-381)||(24885223-24885356)
chr6 (739-879)||(31770861-31771001)
chr6 (741-873)||(2406155-2406287)
chr6 (491-703)||(18001604-18001819)
chr6 (534-694)||(21603436-21603596)
chr6 (739-879)||(26440228-26440368)
chr6 (740-879)||(18005570-18005709)
chr6 (701-847)||(26172737-26172883)
chr6 (704-879)||(3384216-3384391)
chr6 (604-703)||(32641776-32641875)
chr6 (734-887)||(24085939-24086093)
chr6 (491-703)||(32642934-32643152)
chr6 (739-879)||(2407030-2407170)
chr6 (475-664)||(24885416-24885608)
chr6 (482-703)||(31771110-31771329)
chr6 (503-703)||(22304273-22304482)
chr6 (491-703)||(26172960-26173174)
chr6 (766-879)||(32642679-32642792)
chr6 (509-703)||(6204192-6204395)
chr6 (509-703)||(11691159-11691362)
chr6 (509-703)||(30826429-30826632)
chr6 (503-703)||(27638791-27639000)
chr6 (604-703)||(24085739-24085838)
chr6 (493-587)||(3502150-3502244)
chr6 (755-879)||(6203936-6204060)
chr6 (755-879)||(11690903-11691027)
chr6 (755-879)||(22304017-22304141)
chr6 (755-879)||(27638535-27638659)
chr6 (755-879)||(30826764-30826888)
chr6 (760-865)||(21603185-21603290)
chr6 (491-542)||(24085620-24085671)
chr6 (136-183)||(32643455-32643502)
chr6 (248-281)||(2407701-2407734)
chr6 (639-703)||(3384471-3384535)
chr6 (508-575)||(32641674-32641741)
[»] scaffold0155 (4 HSPs)
scaffold0155 (734-878)||(12138-12282)
scaffold0155 (491-575)||(12527-12611)
scaffold0155 (136-205)||(8199-8268)
scaffold0155 (654-703)||(12393-12442)
[»] scaffold0117 (2 HSPs)
scaffold0117 (516-651)||(19248-19383)
scaffold0117 (769-862)||(22450-22543)
[»] scaffold0022 (1 HSPs)
scaffold0022 (710-772)||(56472-56534)


Alignment Details
Target: chr4 (Bit Score: 552; Significance: 0; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 552; E-Value: 0
Query Start/End: Original strand, 131 - 887
Target Start/End: Original strand, 41930512 - 41931254
Alignment:
Q  131 aacttaattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgaggcatc-taaaggtataa 229  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| | |||  ||||    
T  41930512 aactcaattgttgttgacacatcttgataggcttagaaacacaagtaaaatacgtaaatgtccttcggtagttaattgccgaggcatcctgaagccataa 41930611  T
Q  230 aatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataatt 329  Q
    ||||||| ||||               |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  41930612 aatggcataacc---------------tgttacatgtgtttttacacattgtttcaatgccaaatcataaagccaatcaaagaaaattaccaacataatt 41930696  T
Q  330 gaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaag 429  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||     
T  41930697 gaaattgaaaatatgatacggaaatgaacaattgtcataaatatatgtcatcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacggccaaa 41930796  T
Q  430 tgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctc 529  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  41930797 tatcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcctggtcctgctgatgctgctggtgccgcctccttgacctc 41930896  T
Q  530 tggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgct 629  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41930897 tggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctaacccaactgct 41930996  T
Q  630 catcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccaccttagcgtaccatagcacatagtcct 729  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||    
T  41930997 catcaacataagcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccaccttagtgtaccatagcacacaaccct 41931096  T
Q  730 ccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcgg 829  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  41931097 ccctcataagtcatgtctgctctgctgcctgctcaccccaatcggcctccttaatcatgtgagtgcggaagtcgacgaaagtctgcacaatctgaggcgg 41931196  T
Q  830 tggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    ||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  41931197 tggcagctcaacaacatcagtcggatgtctagggactgtttggacgtatccgtgctgc 41931254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 226 - 703
Target Start/End: Complemental strand, 51686635 - 51686157
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacat 325  Q
    ||||||||||| || |||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  51686635 ataaaatggcataatctcttgagacagaacttgttacatgtgtttttacacattgtctcaatgccaaatcataaagtcaatcaaagaaaattaccaacat 51686536  T
Q  326 aattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaa------aacaaagtaacaataaatgtcatgaaaataaaacga 419  Q
     |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |      |||||||||||   |||||||||||||||| ||||     
T  51686535 tattgaaattgaaaatatgatacggaaacgaacaattgtcataaaaatatgtcatcgaaataccaacaaagtaac---aaatgtcatgaaaatacaacgg 51686439  T
Q  420 aatg-gccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcc 518  Q
    || |  | || |||||||||||||||||||||||| | ||||| |||| ||||||||||||||||       |||||||||||||| || ||||||| ||    
T  51686438 aacgaacaaaatgtcatgaaaatatacaccaagtcctaaaaatctatcataaacataaaatacta------ctggtcctgctgatgttgttggtgcctcc 51686345  T
Q  519 tcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat---cacctc 615  Q
    |||||| |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||  |||||||| |  ||| || | | |||| ||   | ||||    
T  51686344 tcctcggcctctggcctcgcctcatggtcaagatcggcgcgatctgctccctaacatgggtcatggcctaaaaccactgttgagggcttatgacctcctc 51686245  T
Q  616 ctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||| || |||||| ||||| | ||||||||| || | |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  51686244 ctggcctaactgcgcatcagcgtaggcaacagcggcactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 51686157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 196 - 473
Target Start/End: Complemental strand, 30708459 - 30708171
Alignment:
Q  196 cggcagttaattgtcgaggcatcta-aaggtataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------tt 283  Q
    |||||||||| ||||||||| |||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           ||    
T  30708459 cggcagttaactgtcgaggcgtcttgaagctataaaatggcagaacctcttgaggcagaacctgttacatttgtttttacacattgtaaacacattgttt 30708360  T
Q  284 caatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaa 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  30708359 caatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcataaatatatgtcatcga 30708260  T
Q  384 aacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaaca 473  Q
    ||||||||||||| |||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  30708259 aacaaagtaacaacaaatgtca-gaaaatacaacgaaacggccaaatgtcatgaaaatatacaccaagtaatgaaaatatatcctaaaca 30708171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 701 - 887
Target Start/End: Original strand, 10730086 - 10730272
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| | ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10730086 caccttagtgtaccataacacatagccctccctcatacgtcatgtctgctctcgtgcctgctcaccccaatcggcctccttcagcgtgtgagtgcggaag 10730185  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||  |||||||||||||||| ||||    
T  10730186 tcgacgaaagcctgcacaatctgaggcggtagcagctcaacaacatccgtcggatttctagggatggtctggacgtatctgtactgc 10730272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 701 - 887
Target Start/End: Original strand, 10943855 - 10944041
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| | ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10943855 caccttagtgtaccataacacatagccctccctcatacgtcatgtctgctctcgtgcctgctcaccccaatcggcctccttcagcgtgtgagtgcggaag 10943954  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||  |||||||||||||||| ||||    
T  10943955 tcgacgaaagcctgcacaatctgaggcggtagcagctcaacaacatccgtcggatttctagggatggtctggacgtatctgtactgc 10944041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 272 - 587
Target Start/End: Complemental strand, 50904800 - 50904483
Alignment:
Q  272 tacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacat 371  Q
    ||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  50904800 tacacattgtttcaatgtcaaatcataaagtcaataaaa--aatttaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcataaaa 50904703  T
Q  372 atatgtcatcaa------aacaaagtaacaataaatgtcatgaaaataaaac-gaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatata 464  Q
    |||||||||| |      |||||||||||   |||||||||||| ||| ||| |||    | || ||||||||||||||||| |||||| | ||||| ||    
T  50904702 atatgtcatcgaaataccaacaaagtaac---aaatgtcatgaatatacaacagaacgaacaaaatgtcatgaaaatatacatcaagtcctaaaaattta 50904606  T
Q  465 tcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctg 564  Q
    ||||||| ||||||||||| || || |||||  | |  ||||| ||||||| ||||||||  || |||| | |||||||||| |||||| ||||||| ||    
T  50904605 tcctaaaaataaaatactactagtcctggtctcggtcctgctgatggtgcctcctcctcggtctttggcgttgcctcctggctaatatcggcgcgatatg 50904506  T
Q  565 ctccctaacatggcgcatggcct 587  Q
    |||||||||||||| ||||||||    
T  50904505 ctccctaacatggctcatggcct 50904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 701 - 887
Target Start/End: Complemental strand, 51686100 - 51685914
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | ||  ||||  |||||||||| |||  |||||||||||||||||||||| |||||||||||||||||| ||||    
T  51686100 caccctagtgtaccataacacatagccatctgtcatccgccatgtctgttctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcagaag 51686001  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    | |||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  51686000 ttgacgaatgcctgcacaatctgaggcggtggcagctctacaacatccgtcggatgtctagggacggtctggacgtatctgtactgc 51685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 518 - 703
Target Start/End: Original strand, 55278613 - 55278798
Alignment:
Q  518 ctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcct 617  Q
    ||||||| |||| ||||||||||| ||| ||||||| | | ||| |||||||||| |||| |||||||||||  |||||||||| || ||||||||||||    
T  55278613 ctcctcggcctccggcctcgcctcttggtcaatatcggtgtgatatgctccctaatatggtgcatggcctcaaaccattgctcagggttcatcacctcct 55278712  T
Q  618 gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||| |||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||  |||||||    
T  55278713 gacccatctgctcatcagcataggcaacaacaccactaaccatgtcataagtatcaggcgagcctctcgcctcgtactactcccac 55278798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 72195 - 71980
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||| |||||||||||| ||||| |||||||  ||||| |||| |||| |||||||||||| || |||||| ||| |||||||||| |||||||| |     
T  72195 tggtccagctgatgctgctagtgcctcctcctcagcctctagccttgccttctggccaatatcggcacgatctactctctaacatggctcatggcctgaa 72096  T
Q  591 tccattgctcatggctcatcacct---cctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     |||||||| | ||||||| ||||   ||||  ||| |||  ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  72095 accattgctgagggctcatgacctactcctgggccatctgtgcatcagcataggcaacaacgccgctaaccatgtcataggtatcaggcgagcttctcgc 71996  T
Q  688 ctcgtaccgctcccac 703  Q
    ||||||||||||||||    
T  71995 ctcgtaccgctcccac 71980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 734 - 879
Target Start/End: Complemental strand, 71869 - 71724
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||      
T  71869 catacgccatgtctgctctcctgcatgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgagccgatgac 71770  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||| |||||||| | ||||||||||||||  |||||||||||||    
T  71769 agctctacaacatccgacagatgtctagggatggtctggacgtatc 71724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 729 - 878
Target Start/End: Complemental strand, 30706841 - 30706692
Alignment:
Q  729 tccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcg 828  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||    
T  30706841 tccctcatacgccatgtctgctctgctgccagctcaccccaatcggcctccttaaacgtgtgagtgcagaagtctacgaatgcctgcacaatctgaggcg 30706742  T
Q  829 gtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    |||  ||||| |||||||| ||| ||||||||||||  |||| |||||||    
T  30706741 gtgtcagctctacaacatccgtcggatgtctagggatcgtctagacgtat 30706692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 512 - 703
Target Start/End: Original strand, 10729814 - 10730008
Alignment:
Q  512 tgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatca 611  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| ||| |||||| |||||||||| || |||||||| |  |||||| | | ||||||| |    
T  10729814 tgccgcctcctcggcctctggcctcacctcttggccaatatcggcgtgatctggtccctaacatagctcatggcctgaaaccattgttgagggctcatga 10729913  T
Q  612 cctcc---tgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||   || |||| |||| ||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||    
T  10729914 cctccgcctggcccatctgcgcatcagcgtaggcaacaacgccgctaaccatgtcataggtatcaggcgagcttctcgccttgtaccgctcccac 10730008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 512 - 703
Target Start/End: Original strand, 10943583 - 10943777
Alignment:
Q  512 tgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatca 611  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| ||| |||||| |||||||||| || |||||||| |  |||||| | | ||||||| |    
T  10943583 tgccgcctcctcggcctctggcctcacctcttggccaatatcggcgtgatctggtccctaacatagctcatggcctgaaaccattgttgagggctcatga 10943682  T
Q  612 cctcc---tgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||   || |||| |||| ||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||    
T  10943683 cctccgcctggcccatctgcgcatcagcgtaggcaacaacgccgctaaccatgtcataggtatcaggcgagcttctcgccttgtaccgctcccac 10943777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 517 - 697
Target Start/End: Original strand, 40886456 - 40886636
Alignment:
Q  517 cctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcc 616  Q
    |||||||| ||||||| |||||||||||| ||||||| | || ||||||||||||||||| ||||||||  ||| |||||||||| |||||||||||| |    
T  40886456 cctcctcggcctctgggctcgcctcctggtcaatatcggtgcaatctgctccctaacatgtcgcatggctgcagaccattgctcaaggctcatcaccttc 40886555  T
Q  617 tgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgc 697  Q
    ||||| || ||||||||| ||||||||||||||||  ||| ||| ||| |||||||| | |||| ||||||||||||||||    
T  40886556 tgacctaattgctcatcagcataggcaacaacgccattaatcatctcataagtatcaagagagcctctcgcctcgtaccgc 40886636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 50278081 - 50277941
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||    
T  50278081 gccatgtctgctctcctgcctgctcaccccaatcggctgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatatgaggcggtggcaactc 50277982  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||||| ||||| |||||||||||||    
T  50277981 tacaacatccgtcggatgtctggggacggtctggacgtatc 50277941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 493 - 699
Target Start/End: Complemental strand, 14317865 - 14317656
Alignment:
Q  493 gtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtc 592  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||| | |  |    
T  14317865 gtcctgttgatgctgctggtgcctcctcctcgtcctctggcctcgcctcctggccaacatcggcgcgatctgctctctaacatggctcatggcttgaaac 14317766  T
Q  593 cattgctcatggctcatcacct---cctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcct 689  Q
    ||||| | | ||||||| ||||   |||| |||| |||| | ||| | ||||||||| | |||||||| |||||| | |||||| |||||||||||||||    
T  14317765 cattgttgagggctcatgacctccgcctggcccatctgcgcgtcagcgtaggcaacagcaccgctaacaatgtcataggtatcacgcgagcttctcgcct 14317666  T
Q  690 cgtaccgctc 699  Q
    ||||||||||    
T  14317665 cgtaccgctc 14317656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 8110409 - 8110194
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |     
T  8110409 tggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcccctcctggccaatatcggcgcgatctgctccctaacatggctcatggcctgaa 8110310  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| | || |  ||||||   | ||||||| |||| |||  ||||| ||||||||||| || | | ||  |||||| | || |||||||||||||||||    
T  8110309 accactactgagagctcatgacctcctcctggcccatctgtgcatcagcataggcaacagcggcacgaaatatgtcataggtgtcaggcgagcttctcgc 8110210  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||||||||    
T  8110209 ctcataccgctcccac 8110194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 734 - 879
Target Start/End: Original strand, 13624658 - 13624803
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||      
T  13624658 catacgccatgtctgctctcttgcatgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctcagccggtgac 13624757  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    || || |||||||| | | ||||||||||||| |||||||||||||    
T  13624758 agatctacaacatccgacggatgtctagggacggtctggacgtatc 13624803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 739 - 887
Target Start/End: Complemental strand, 50904290 - 50904142
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  | |||||||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||    
T  50904290 gccatgtctgctctcctacctgctcacctcaatcggccaccttaagcgtgtgagtgcggaaatcgacgaacgcctgcacaatatgaggcggtggaagctc 50904191  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
     |||||||| ||| |||| || ||||| |||||||||||||||| ||||    
T  50904190 tacaacatccgtcggatgcctggggacggtctggacgtatctgtactgc 50904142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 8110116 - 8109938
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  ||| | |||||||||||||  |||||||||||||||||||||  |||||||||| |||||||| |||    
T  8110116 caccctagtgtaccataacacatagccatccgccatcaaccatgtctgctctcttgcctgctcaccccaatcggctgccttaagcgtatgagtgcgaaag 8110017  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| |||||||||||||||| |||||| ||||| |||||||  ||| ||||||| ||||| |||||||||||||    
T  8110016 tcgacgaatgcctgcacaatctgagacggtggcagctctacaacattcgtcggatgtctggggacggtctggacgtatc 8109938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 44677076 - 44677254
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||||||| || | |||  |||  |||||||||| |||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  44677076 caccctagtgtaccatagcacacagccatccgccatgtgccatgtctgttctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaag 44677175  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||||||||| | ||||||||| || |  ||||||||||||||||| || ||||  ||||||| |||||    
T  44677176 tcgacgaacgcctgcacaatgtaaggcggtgggaggtttacaacatcagtcagatgcctggggatggtctggatgtatc 44677254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 701 - 882
Target Start/End: Complemental strand, 14317574 - 14317393
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||| ||||||   ||| |||||||||| || | |||||||||||||||||||||||||    
T  14317574 caccttagtgtaccataacacatagccctccctcatacgccatgtttgctctcccgccggctcaccccattcaggctccttaagcgtgtgagtgcggaag 14317475  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgt 882  Q
    || |  || || ||||||||||||||  |||| ||||| |||||||| ||| |||| |||||||| || |||||||||||||    
T  14317474 tcaagaaatgcttgcacaatctgaggtagtggcagctctacaacatccgtcggatgactagggacagtttggacgtatctgt 14317393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 488 - 703
Target Start/End: Complemental strand, 50196591 - 50196373
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||||||||| || || |||| |||||||| ||||||||||| |||||||| ||| ||| | |||||||||||||||| ||||| ||||||||    
T  50196591 tcttggtcctgctgatgttgttgatgcctcctcctcggcctctggcctcacctcctggtcaagatcggtgcgatctgctccctaagatggctcatggcct 50196492  T
Q  588 cagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     |  ||| || | | |||||||   | ||||||| |||| |||  ||||| | ||||||||| || | |||||||||||| | || ||||||||||||||    
T  50196491 gaaaccactgttaagggctcatgacctcctcctggcccatctgtgcatcagcgtaggcaacagcggcactaaccatgtcataggtgtcaggcgagcttct 50196392  T
Q  685 cgcctcgtaccgctcccac 703  Q
    |||||| ||||||||||||    
T  50196391 cgcctcataccgctcccac 50196373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 41930377 - 41930452
Alignment:
Q  21 aggtgactgtcacggattgggtaagaaatggaatgtcctaaccagcgtaaacggttagaagtgtgcaacgacgtcg 96  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41930377 aggtgactgtcacggattgggtaagaaatggaatgtcctaacgagcgtaaacggttagaagtgtgcaacgacgtcg 41930452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 536 - 703
Target Start/End: Original strand, 11081483 - 11081653
Alignment:
Q  536 cgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctc---ctgacccaactgctcat 632  Q
    |||||||||| ||||||| ||| ||||| |||||||||||||  |||||||| |  ||||| |||| || |||| ||||    ||||||||  ||| |||    
T  11081483 cgcctcctggtcaatatcggcgtgatcttctccctaacatgggtcatggcctgaaaccattactcaggggtcataacctttgtctgacccatatgcgcat 11081582  T
Q  633 caacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  11081583 caacgtaggcaacatcgccactaaccatgtcacaggtatcaggcgagcttctcgcctcgtaccgcccccac 11081653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 780 - 887
Target Start/End: Complemental strand, 46438954 - 46438847
Alignment:
Q  780 ttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||| |||||||| ||| |||||||||||||  ||||||||||||    
T  46438954 ttaagcgtgtgagtgcggaagtcgacgaatgtctgcacaatctgaggcggtgtcagctctacaacatccgtcggatgtctagggaccctctggacgtatc 46438855  T
Q  880 tgtgctgc 887  Q
    ||| ||||    
T  46438854 tgtactgc 46438847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 758 - 877
Target Start/End: Original strand, 50020835 - 50020954
Alignment:
Q  758 ctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgt 857  Q
    |||||||||||||||||||||||| ||| ||||||||||  ||| |||||| |||||||||||||||| |||||||||||| |||||||| ||| |||||    
T  50020835 ctgctcaccccaatcggcctccttgagcatgtgagtgcgagagttgacgaatgcctgcacaatctgagtcggtggtagctctacaacatccgtcggatgt 50020934  T
Q  858 ctagggactgtctggacgta 877  Q
    || ||||| || ||||||||    
T  50020935 ctggggacggtatggacgta 50020954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 40886760 - 40886900
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||  |||| ||||| ||||||||||||||| |||||||| ||||||||| ||||| || |||||||||||||||||||||| || | | | |||    
T  40886760 gccatgtcacctctcatgccggctcaccccaatcgggctccttaatcgtgtgagtacggaaatcaacgaaagcctgcacaatctgagtcgctcgcaactc 40886859  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||||  ||||||||||||||||  |||| |||||||    
T  40886860 aacaacatccatcagatgtctagggacgttctgcacgtatc 40886900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 499 - 699
Target Start/End: Original strand, 21535045 - 21535248
Alignment:
Q  499 ctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgc 598  Q
    |||||| || || ||||||||||||| |||||||||| |||||   | |||||||  ||||||||||||||||||||||| |||||||| |   ||||||    
T  21535045 ctgatgttgttgttgccgcctcctcggcctctggccttgcctctgtgtcaatatcgacgcgatctgctccctaacatggctcatggcctgaaatcattgc 21535144  T
Q  599 tcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtacc 695  Q
    | | |||||||   | |||||| |||||  ||  ||||| | ||||||||| || | |||||||||||| | ||||||||||||||||||||||| ||||    
T  21535145 tgagggctcatgacctcctcctaacccatttgtgcatcagcgtaggcaacagcggcactaaccatgtcataggtatcaggcgagcttctcgcctcatacc 21535244  T
Q  696 gctc 699  Q
    ||||    
T  21535245 gctc 21535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 485 - 703
Target Start/End: Complemental strand, 46439277 - 46439063
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| ||||||||||||| ||||||||||| ||||||||       | |||||||||||| ||| |||  ||||||||||||||||||||||  |||||    
T  46439277 tactcctggtcctgctgatactgctggtgcctcctcctcg-------gtctcgcctcctggtcaagatcgacgcgatctgctccctaacatgggtcatgg 46439185  T
Q  585 cctcagtccattgctcatggctcatcacctcct---gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  ||| || ||| ||||||| |||||||   || | |  ||| |||||||  ||||||||||| | |||||||||||| | || |||||||||||    
T  46439184 cctgaaaccactgttcagggctcatgacctcctcctgatctatatgcgcatcaacgcaggcaacaacgacactaaccatgtcataggtgtcaggcgagct 46439085  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||||||||||| ||||    
T  46439084 tctcgcctcgtaccgcttccac 46439063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 497 - 703
Target Start/End: Complemental strand, 12892158 - 12891955
Alignment:
Q  497 tgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccatt 596  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||| || ||||||||||  |||||| ||||| |||| ||  | |||    
T  12892158 tgctcatgctgctgttgccgcctcctcggcctctggcctcgcctcctggtcaatatcggcacgatctgctcgttaacatagcgcaaggccgcatacaatt 12892059  T
Q  597 gctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccg 696  Q
      | | ||||||||||||||| |||||  ||||||| | ||| |||||| || ||  | ||||||||| | ||||   |||||||||||||||||||  |    
T  12892058 attgagggctcatcacctcctaacccagatgctcataatcatgggcaacgactccagttaccatgtcataggtat---gcgagcttctcgcctcgtattg 12891962  T
Q  697 ctcccac 703  Q
    |||||||    
T  12891961 ctcccac 12891955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 488 - 703
Target Start/End: Original strand, 50020494 - 50020712
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||||||||||| |||||||| |||||||  ||| |||||||||||||||| ||| ||| ||||||| |||||| ||| ||||| ||||||||    
T  50020494 tcttggtcctgctgatgcttctggtgcctcctcctcagcctttggcctcgcctcctggtcaagatcggcgcgatttgctccataagatggctcatggcct 50020593  T
Q  588 cagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     |  ||| | || | ||| |||   | ||||||| |||| |||  |||||   ||||||||| || | |||||||||||| | || |||||| |||||||    
T  50020594 gaaaccactactgagggcccatgacctcctcctggcccatctgtgcatcagtgtaggcaacagcggcactaaccatgtcataggtgtcaggcaagcttct 50020693  T
Q  685 cgcctcgtaccgctcccac 703  Q
    |||||| ||||||||||||    
T  50020694 cgcctcataccgctcccac 50020712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 528 - 647
Target Start/End: Original strand, 40884752 - 40884870
Alignment:
Q  528 tctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactg 627  Q
    ||||| ||| ||||||||  |||||| | |||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| ||| || ||    
T  40884752 tctgggctcacctcctggttaatatcggtgcgatctgctcc-taacatggcgcatggccgcagaccattgctcaaggctcatcacctcctaacctaattg 40884850  T
Q  628 ctcatcaacataggcaacaa 647  Q
    ||||||| ||||||||||||    
T  40884851 ctcatcagcataggcaacaa 40884870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 21018397 - 21018606
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  21018397 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 21018496  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| ||||  ||||||||||| | || |||||||||||||||||||| ||    
T  21018497 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccattaaccatgtcataggtgtcaggcgagcttctcgcctcata 21018596  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  21018597 ccgctcccac 21018606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 30723546 - 30723755
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  30723546 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 30723645  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  30723646 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 30723745  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  30723746 ccgctcccac 30723755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 13624448 - 13624547
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||||   ||||||| |||  ||||||||||| |||||||| ||| | |||||| |||||||||||||||||||||||||||||    
T  13624448 gctcatcacctcctgacccaaaaactcatcagcatgcgcaacaacgccactaaccatatcataggtatcatgcgagcttctcgcctcgtaccgctcccac 13624547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 21018684 - 21018862
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||| |||||| | |||  |||  ||||||||| ||||  |||||||||||||| |||| || |||||||||||||||||||||||    
T  21018684 caccctagtgtaccataggacatagccatccgccatccgccatgtctcctctcctgcctgctcaccccgatcgtccgccttaagcgtgtgagtgcggaag 21018783  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||||||  |||||| |||   ||||||||| || ||   |||||||||| ||||||| ||||  ||||| |||||||    
T  21018784 tcgacgaacacctgcataatgaaaggcggtgggaggtccctaacatcagtcggatgtctggggatggtctgcacgtatc 21018862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 37016734 - 37016855
Alignment:
Q  758 ctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgt 857  Q
    |||||||||||||||| || ||||||| ||||||||||||||||| ||||| | ||||||||| | ||||| ||| || || |||||||| |||||||||    
T  37016734 ctgctcaccccaatcgtccgccttaagtgtgtgagtgcggaagtcaacgaacgtctgcacaatgtaaggcgatgggaggtctacaacatccgtcagatgt 37016833  T
Q  858 ctagggactgtctggacgtatc 879  Q
    || ||||  |||| ||||||||    
T  37016834 ctggggatggtcttgacgtatc 37016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 273 - 385
Target Start/End: Complemental strand, 12892373 - 12892261
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| ||||||||||| | ||| ||   ||||||||||||||||| ||||||||||| |||||||  ||| | ||||||||||| | |    
T  12892373 acacattgtttcaatgccaaatcataaatttaataaacagaaattaccaacataatttaaattgaaaatttgatacgagaaccagcaattgtcatagaaa 12892274  T
Q  373 tatgtcatcaaaa 385  Q
    |||||||||||||    
T  12892273 tatgtcatcaaaa 12892261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 1305945 - 1306148
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  1305945 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 1306044  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  1306045 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcttaccgctg 1306144  T
Q  700 ccac 703  Q
    ||||    
T  1306145 ccac 1306148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 6178615 - 6178818
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  6178615 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 6178714  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  6178715 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 6178814  T
Q  700 ccac 703  Q
    ||||    
T  6178815 ccac 6178818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 612 - 703
Target Start/End: Original strand, 40355340 - 40355431
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || |||||| ||||| | |||||||||||||| |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  40355340 cctcctggcctaactgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 40355431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 14297084 - 14297153
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||    
T  14297084 aattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaa 14297153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 14315333 - 14315402
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||    
T  14315333 aattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaa 14315402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 30723909 - 30724033
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||||||   |||||||||   ||||||||| || ||   |||||||||| ||    
T  30723909 tgcctgctcaccccgatcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaattgaaggcggtgggaggtccctaacatcagtcgga 30724008  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  30724009 tgtctggggatggtctgcacgtatc 30724033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 40355563 - 40355687
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||| ||||||||||||||||||||||||  ||||||||||   || |||||| || ||   |||| ||||| ||    
T  40355563 tgcctgctcaccccgatcgtccgccttaatcgtgtgagtgcggaagtcgacgaacacctgcacaatggaagacggtgggaggtccctaacagcagtcgga 40355662  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||||||||  |||||||||||||    
T  40355663 tgtctagggatggtctggacgtatc 40355687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 31424986 - 31424783
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| ||| |||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  31424986 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgtgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 31424887  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||||| || |||| ||||||||||||||| |||||||     
T  31424886 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcacaggtgtcagacgagcttctcgcctcataccgctg 31424787  T
Q  700 ccac 703  Q
    ||||    
T  31424786 ccac 31424783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 761 - 879
Target Start/End: Original strand, 21535368 - 21535486
Alignment:
Q  761 ctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtcta 860  Q
    |||||| ||||||| |||||| ||||||||||||||| |||| | ||  | ||||||||||||||| ||| | ||||| |||||||| ||| ||||||||    
T  21535368 ctcacctcaatcgggctccttgagcgtgtgagtgcggtagtcaaggattgtctgcacaatctgaggtggtcgcagctctacaacatccgtcggatgtcta 21535467  T
Q  861 gggactgtctggacgtatc 879  Q
    ||||| |||| ||| ||||    
T  21535468 gggacggtctcgacatatc 21535486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 612 - 703
Target Start/End: Complemental strand, 49093556 - 49093465
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  49093556 cctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 49093465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 587
Target Start/End: Original strand, 44674656 - 44674734
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||| |||||||| |||||||||||||||||| | ||| ||| |||||||||||||||| | ||||| ||||||||    
T  44674656 tggtgcctcctcctcggcctctggcctcgcctcctagtcaaaatcggcgcgatctgctccctcatatggctcatggcct 44674734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 49168763 - 49168554
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||| ||| ||| |||||||| ||| |||  ||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  49168763 tgctgatggtgcctcctcctcggcctatgggctctcctcctggtcaaaatcgacgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 49168664  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| ||||||||| || | || |||||||||||||||||||| ||    
T  49168663 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgccataggtgtcaggcgagcttctcgcctcata 49168564  T
Q  694 ccgctcccac 703  Q
    ||||| ||||    
T  49168563 ccgctgccac 49168554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 6178950 - 6179074
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  6178950 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 6179049  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  6179050 tgtctggggatggtctgcacgtatc 6179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 31424651 - 31424527
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  31424651 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccttaacatcagtcgga 31424552  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  31424551 tgtctggggatggtctgcacgtatc 31424527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 41795973 - 41796053
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  41795973 aactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 41796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 41796169 - 41796309
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  | |||||||||||||  || || |||||||||||||||||| ||||||||||||   |||||||||   ||||||||| || ||    
T  41796169 gccatgtctcctctcctacctgctcaccccaggcgtccgccttaagcgtgtgagtgccgaagtcgacgaacatctgcacaatggaaggcggtgggaggtc 41796268  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
       |||||||||| ||||||| ||||  ||||| |||||||    
T  41796269 cctaacatcagtcggatgtctggggatggtctgcacgtatc 41796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 49168422 - 49168298
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  49168422 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 49168323  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  49168322 tgtctggggatggtctgcacgtatc 49168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 503 - 587
Target Start/End: Complemental strand, 50278385 - 50278301
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| |||||||| ||||||||| |||||||||| ||| ||| || ||||||||||||| | ||||| ||||||||    
T  50278385 tgctgatggtgcctcctcctcggcctctggccccgcctcctggtcaaaatcggctcgatctgctccctcatatggctcatggcct 50278301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 757 - 879
Target Start/End: Original strand, 1306284 - 1306406
Alignment:
Q  757 cctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatg 856  Q
    |||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||||    
T  1306284 cctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcggatg 1306383  T
Q  857 tctagggactgtctggacgtatc 879  Q
    ||| ||||  ||||| |||||||    
T  1306384 tctggggatggtctgcacgtatc 1306406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 37016409 - 37016493
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| |||||||| ||||||||||||||| || | ||| ||| |||||||||||||||| | || || ||||||||    
T  37016409 tgctgatggtgcctcctcctcggcctctggcctcgccttctagtcaaaatcggcgcgatctgctccctcatattgctcatggcct 37016493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 49093332 - 49093208
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||| |||||||||||||||||| |||   |||||||||   |||||| || || ||   |||||||||| ||    
T  49093332 tgcctgctcaccccgagcgtccgccttaagcatgtgagtgcggaagtcgatgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 49093233  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||||||||  ||||| |||||||    
T  49093232 tgtctagggatggtctgcacgtatc 49093208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 46439697 - 46439650
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  46439697 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaatac 46439650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 668 - 703
Target Start/End: Complemental strand, 50904432 - 50904397
Alignment:
Q  668 gtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||||||||||||||||||||||||||||||||    
T  50904432 gtatcaggcgagcttctcgcctcgtaccgctcccac 50904397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 72640 - 72562
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||||||||  |||| || ||||| |||||| || |||||    
T  72640 aattgttgttgacacatctttttaggctgagaaacacgagtaaaataccaaaataccattcggtagttaactgccgagg 72562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 703
Target Start/End: Complemental strand, 50278247 - 50278197
Alignment:
Q  653 ctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  50278247 ctaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 50278197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 703
Target Start/End: Original strand, 44676933 - 44676998
Alignment:
Q  638 taggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||||||| ||   |||||||||| | || |||||||||||||||||||| ||||||||||||    
T  44676933 taggcaacaacaccataaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 44676998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 9893367 - 9893331
Alignment:
Q  169 acacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9893367 acacaagtaaaatacgaaaatgcccttcggcagttaa 9893331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 764 - 820
Target Start/End: Complemental strand, 12891814 - 12891758
Alignment:
Q  764 accccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaat 820  Q
    ||||||||||| ||||||||   ||||||||||| |||| |||||||||||||||||    
T  12891814 accccaatcgggctccttaattttgtgagtgcggtagtcaacgaaagcctgcacaat 12891758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 13624331 - 13624383
Alignment:
Q  493 gtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctgg 545  Q
    ||||||||| ||||| ||||||| |||||||| | ||||||||||||||||||    
T  13624331 gtcctgctggtgctgttggtgcctcctcctcggcatctggcctcgcctcctgg 13624383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 40886235 - 40886299
Alignment:
Q  317 taccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatc 381  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||||| ||||||| | |||| |||||    
T  40886235 taccaacatcatttaaattgaaaatatgatacgaaaaccaacaaatgtcatagaaatatttcatc 40886299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10753550 - 10753503
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| | ||||||||    
T  10753550 aattgttgttgacacatcttgttaggctgagaaacacgaataaaatac 10753503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10967319 - 10967272
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| | ||||||||    
T  10967319 aattgttgttgacacatcttgttaggctgagaaacacgaataaaatac 10967272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 10729341 - 10729387
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaata 182  Q
    ||||||| |||||||||||||||||| | |||||||| |||||||||    
T  10729341 aattgttgttgacacatcttgttaggttgagaaacacgagtaaaata 10729387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 10943110 - 10943156
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaata 182  Q
    ||||||| |||||||||||||||||| | |||||||| |||||||||    
T  10943110 aattgttgttgacacatcttgttaggttgagaaacacgagtaaaata 10943156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 589
Target Start/End: Original strand, 41795844 - 41795930
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctca 589  Q
    ||||| ||||||| || ||||| ||||||| ||| |||||||| ||  ||| |||||||||||||||| | ||||  ||||||||||    
T  41795844 tgctgatggtgcctccgcctcggcctctgggctctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctca 41795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 55407916 - 55407867
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgt 185  Q
    ||||| ||||||||||| | |||||||| |||||||| ||||||||||||    
T  55407916 aattgctattgacacatttggttaggctgagaaacacgagtaaaatacgt 55407867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 275 - 698
Target Start/End: Complemental strand, 15940115 - 15939692
Alignment:
Q  275 acattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatata 374  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||    
T  15940115 acattatttcaatgccaaatcataaagttaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaaaaattgtcataaaaata 15940016  T
Q  375 tgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacat 474  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||| || ||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  15940015 tgtcatcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacggtcaaatgtcatgaaaatatacaccaagtcctaaaaatatatcctaaacat 15939916  T
Q  475 aaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaaca 574  Q
    || |||||| ||||| ||||  |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  15939915 aagatactactactcctggtgttgctgatgttgctggtgccgcctcctcggcctctggcctcgcctcctgaccaatatcggcgcgatctgctccctaaca 15939816  T
Q  575 tggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcag 674  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | ||||||     
T  15939815 tggcgcatggcctcagtccattgctcagggctcatcacctcctgacccaactactcatcaacataggcaacaacgcctctaaccatgtcataggtatcat 15939716  T
Q  675 gcgagcttctcgcctcgtaccgct 698  Q
    ||||||||||||||||||||||||    
T  15939715 gcgagcttctcgcctcgtaccgct 15939692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 226 - 703
Target Start/End: Complemental strand, 38971575 - 38971084
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------ttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||           || || | |||||||||||||||||||||||||    
T  38971575 ataaaatggcagaacctcttgaggcataacctgttacatgtgtttttacacattgtaaacacattgttttaaagccaaatcataaagtcaatcaaagaaa 38971476  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaataa 414  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||| ||||||     
T  38971475 attatcaacataattgaaattgaaaatatgatatggaaacgaacaattgtcataaatatatgtcgtcgaaacaaagtaacaacaaatgtcataaaaatac 38971376  T
Q  415 aacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgc 514  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  38971375 aacgaaacggccaaatgtcatgaaaatatacaccaagacatgaaaatatatcctaaacataaaatattactactcctggtcctgctgatgctgctcgtgc 38971276  T
Q  515 cgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat---ca 611  Q
    | |||||||| ||| |||||||||||| ||| ||| ||| |||||||||||||||||||||||  |||||||| |  ||| || | | |||||||   |     
T  38971275 ctcctcctcggcctttggcctcgcctcttggtcaagatcggcgcgatctgctccctaacatgggtcatggcctgaaaccactgttgagggctcatggcct 38971176  T
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||| | |||| ||||| | |||||||||||| | |||||||||||| | || |||| |||||||||||| || || |||||||||    
T  38971175 cctcctgacctatctgcgcatcagcgtaggcaacaacggcactaaccatgtcataggtgtcagacgagcttctcgcttcatatcgctcccac 38971084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 226 - 506
Target Start/End: Original strand, 36503194 - 36503485
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacac-----------attgtttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||| |||||||||||||||||||||||||    
T  36503194 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtaaacacattgtttcaatgccaaatcataaagtcaatcaaagaaa 36503293  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaataa 414  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| || |||||||||||||| ||||||||||||||||     
T  36503294 attaccaacataattgaaattgaaaatatgatacggaaatgaacaattgccataaatatatgtcgtcgaaacaaagtaacaacaaatgtcatgaaaatac 36503393  T
Q  415 aacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgct 506  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||| ||||    
T  36503394 aacgaaacggccaaatgtcatgaaaatatacaccaagttatgaaaatatatcttaaacataaaatactactactcttgatcctgctggtgct 36503485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 226 - 703
Target Start/End: Complemental strand, 42539325 - 42538836
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------ttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||           ||||||| ||| |||||||||||||||||||||    
T  42539325 ataaaatgacaaaacctcttgaggcagaacctgttacatgtgtttttacacattgtaaacacattatttcaatgccaactcataaagtcaatcaaagaaa 42539226  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcat-acatatatgtcatc------aaaacaaagtaacaataaatgtcatg 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | |||| |||       ||||||||||||   ||||||||||    
T  42539225 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcataaaaaaaatgttatcgaaatacaaacaaagtaac---aaatgtcatg 42539129  T
Q  408 aaaataaaacgaaatg-gccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgct 506  Q
    |||||| ||||||| |  | || |||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||| |||||||    
T  42539128 aaaatacaacgaaacgaacaaaatgtcatgaaaatatacaccaagtcctaaaaatctatcctaaacataaaatactactactcttagtcctgttgatgct 42539029  T
Q  507 gctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggct 606  Q
    ||||||||| |||||||||       ||||||||||||| ||| ||| |||||||||||||| ||||||||  |||||||| |  ||| || | | ||||    
T  42539028 gctggtgcctcctcctcga-------cctcgcctcctggtcaaaatcggcgcgatctgctccttaacatgggtcatggcctgaaaccactgttgagggct 42538936  T
Q  607 cat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||   | |||||||||| |  ||| ||||| | ||||||||| || | ||||||||||||   || ||||| |||||||||||||||||||||| ||||    
T  42538935 catgacctcctcctgacctatttgcgcatcagcgtaggcaacagcgacactaaccatgtcatttgtgtcaggagagcttctcgcctcgtaccgcttccac 42538836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 704 - 879
Target Start/End: Complemental strand, 15939607 - 15939432
Alignment:
Q  704 cttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcg 803  Q
    ||||| |||||||| ||||||| ||||||||||| ||| ||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  15939607 cttagtgtaccataacacatagccctccctcatacgccttgtctgctctactgcctgctcatcccaatcggtctccttaagcgtgtgagtgcggaagtcg 15939508  T
Q  804 acgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    || |||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||| |||||||| ||||    
T  15939507 acaaaagcctgcacaatatgaggcggtggcagctcaacaacatcaatcggatgtctagggaccgtctggacatatc 15939432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 491 - 699
Target Start/End: Original strand, 40622804 - 40623015
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||||||| || ||||||| |||||||| |||||||||| |||||||||||||||||  |||||||||||| |||||||||| |||||||| |     
T  40622804 tggtcctgctgatgttgttggtgcctcctcctcggcctctggccttgcctcctggccaatatcgccgcgatctgctctctaacatggctcatggcctgaa 40622903  T
Q  591 tccattgctcatggctcatcacctc---ctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     |||||| | | ||||||| |||||   |||||||| |||| ||||  ||||||||||||| | ||||||||||||| | |||||| |||||||||||||    
T  40622904 accattgttgagggctcatgacctccgtctgacccatctgcacatctgcataggcaacaacactgctaaccatgtcatatgtatcaagcgagcttctcgc 40623003  T
Q  688 ctcgtaccgctc 699  Q
    ||||||||||||    
T  40623004 ctcgtaccgctc 40623015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 701 - 887
Target Start/End: Complemental strand, 38971006 - 38970820
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||| | ||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||||    
T  38971006 caccttagtgtaccacaacacatagccctccctcatacgccatgtctgctctgctgtctgctcaccccaatcggtcgccttaagcgtgtgagtgcggaag 38970907  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||| || |||||||||| ||||||||  ||||| |||||||  |||||||||| |||||   |||| |||||||||| ||||    
T  38970906 tcgacgaatgcttgcacaatctaaggcggtgtcagctctacaacattcgtcagatgtccagggatcttctgtacgtatctgtactgc 38970820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 38407974 - 38408114
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  38407974 gccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtgaggcggtggcagctc 38408073  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| || |||||| | ||||| |||||||||||||    
T  38408074 tacaacatccgttagatgtatggggacggtctggacgtatc 38408114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 758 - 887
Target Start/End: Original strand, 42937787 - 42937916
Alignment:
Q  758 ctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgt 857  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||||||     
T  42937787 ctgctcaccccaatcggtcgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatatgaggcggtggaagctctacaacatccgtcagatgc 42937886  T
Q  858 ctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||| |||||||||||||||| ||||    
T  42937887 ctagggacagtctggacgtatctgtactgc 42937916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 5199694 - 5199554
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||| |||||| ||||||||||  |||||    
T  5199694 gccatgtctgctctcctgcctgctcacctcaatcggccgccttaaacgtgtgagtgcggaagtcgacgaatgcctacacaatttgaggcggtgacagctc 5199595  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| |||||||||||||  ||||||||||||    
T  5199594 tacaacatccgtcggatgtctagggaccctctggacgtatc 5199554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 739 - 878
Target Start/End: Complemental strand, 7760264 - 7760125
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | | ||||||| || ||    
T  7760264 gccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaaagcggtggcaggtc 7760165  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
     |||||||| || |||||||| ||||  ||||||||||||    
T  7760164 tacaacatccgttagatgtctggggatggtctggacgtat 7760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 511749 - 511873
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||| |||||||| |||  |    
T  511749 tgcctgctcaccccaatcggccgccttaaacgtgtgagtgcggaagtcgatgaatgcctgtacaatctgaggcggtggcagctctacaacatccgtcgaa 511848  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    |||||||||||  ||||||||||||    
T  511849 tgtctagggacgctctggacgtatc 511873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 8699556 - 8699696
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |  |||||    
T  8699556 gccatgtctgctctcctgcatgctcaccccaatcggcctcctcaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctcagccggcgacagctc 8699655  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| | | ||||||||||| | |||| ||||||||    
T  8699656 tacaacatccgacggatgtctaggggcggtctagacgtatc 8699696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 5200024 - 5199803
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||| ||||| |||| ||| |     
T  5200024 tggtcctgctgatgctgctggtgcctcctcctcggcctctggcttcgcctcctggtcaagatcggcgcgatctgctccctaagatggctcatgacctgaa 5199925  T
Q  591 tccattgctcatggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     ||| |||| | |||||||         | ||||||| || |||||| ||||| | ||| ||||  |||| |||||||||||| | || |||||||||||    
T  5199924 accactgctgagggctcatgctcatgacctcctcctggcctaactgcgcatcagcgtagacaacggcgccactaaccatgtcataggtgtcaggcgagct 5199825  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||||||||||    
T  5199824 tctcgcctcataccgctcccac 5199803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 430 - 703
Target Start/End: Original strand, 42937406 - 42937670
Alignment:
Q  430 tgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctc 529  Q
    ||||||||||||||||| |||||| | |||||  |||||||||||||||| ||| |      |||||||||||||      ||||| |||||||  ||||    
T  42937406 tgtcatgaaaatatacatcaagtcctaaaaatcaatcctaaacataaaatgctact------ggtcctgctgatg------gtgcctcctcctcagcctc 42937493  T
Q  530 tggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat---cacctcctgacccaact 626  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||||| |||||||| |  ||| || | | |||||||   | ||||||| || | ||    
T  42937494 tggcctcgcctccttgctaatatcggcgcaatctgctccctaacatggctcatggcctgataccactgttgagggctcatgccctcctcctggcctatct 42937593  T
Q  627 gctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |  ||| | | ||||||||| || | |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  42937594 gtgcattagcgtaggcaacagcggcactaaccatgtcataggtatcaggcgagcttctcgcctcgtaccgctcccac 42937670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 745 - 874
Target Start/End: Complemental strand, 42538714 - 42538585
Alignment:
Q  745 tctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaac 844  Q
    ||||||||  |||||||||||||||||||| | |  ||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||    
T  42538714 tctgctcttgtgcctgctcaccccaatcggtcgctgtaagcgtgtgagtgcggaagtcgacaaatgcctgcacaatctgaggtggtggcagctctacaac 42538615  T
Q  845 atcagtcagatgtctagggactgtctggac 874  Q
    ||| ||| |||||||||||||  |||||||    
T  42538614 atccgtcggatgtctagggacgctctggac 42538585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 15940333 - 15940220
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgaggcat-ctaaaggtataaaatgg 234  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  ||||| | || |||  |||||||||    
T  15940333 aattgttgttgacacatcttgttagacttagaaacacaagtaaaatatgtaaatgcccttcgacagttaattgctgaggcgtcctgaagccataaaatgg 15940234  T
Q  235 cagaacctcttgag 248  Q
    ||||||||||||||    
T  15940233 cagaacctcttgag 15940220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 8699342 - 8699440
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||||   ||||||| ||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  8699342 gctcatcacctcctgacccaaaa-ctcatcagcatcggcaacagcgccgctaaccatgtcataggtatcaggcgagcttctcgcctcgtaccgctcccac 8699440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 701 - 887
Target Start/End: Original strand, 8745 - 8931
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||| |||||||| ||| ||||  | ||||||| ||||  |||||||||||||| |||| |  |||||||||||||||||||||||    
T  8745 caccctagtgtaccataggacatagtcatccgtcatccgtcatgtctcctctcctgcctgctcaccccgatcgtctgccttaagcgtgtgagtgcggaag 8844  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    ||||||||  ||||||||||  ||||||| || || ||   |||||||||| ||||||| ||||  ||||| |||||||||| ||||    
T  8845 tcgacgaacacctgcacaatgggaggcggcgggaggtccctaacatcagtcggatgtctggggatggtctgcacgtatctgtactgc 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 8468 - 8677
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| || | |     
T  8468 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgttgag 8567  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||||| || |||||||||||||||||||| ||    
T  8568 gggtcatgctcataacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcacaggtgtcaggcgagcttctcgcctcata 8667  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  8668 ccgctcccac 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 38407662 - 38407865
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg---- 604  Q
    ||||||| |||||||| ||| |||||||||||||||| ||| ||| |||||||||||||||| | ||||| |||||||| |  ||| |||| | ||        
T  38407662 tggtgcctcctcctcggcctatggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgaggggtca 38407761  T
Q  605 --ctcatcacctcct---gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
      ||||| |||||||   | || |||||| ||||| | |||||||||||||| | |||||||||| | || |||||||||||||||||||| ||||||||    
T  38407762 tgctcatgacctcctcttggcctaactgcgcatcagcgtaggcaacaacgccacaaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctc 38407861  T
Q  700 ccac 703  Q
    ||||    
T  38407862 ccac 38407865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 511 - 703
Target Start/End: Complemental strand, 30708291 - 30708090
Alignment:
Q  511 gtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat- 609  Q
    ||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || ||||     
T  30708291 gtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtcatg 30708192  T
Q  610 --------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctccc 701  Q
            | ||||||| || |||||| ||||| ||||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||||||    
T  30708191 ctcatgacctcctcctggcctaactgcgcatcagcataggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctccc 30708092  T
Q  702 ac 703  Q
    ||    
T  30708091 ac 30708090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 42937280 - 42937367
Alignment:
Q  194 ttcggcagttaattgtcgaggcatc-taaaggtataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattg 280  Q
    |||||||||||| || |||||| || | |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42937280 ttcggcagttaactgccgaggcttcctgaagccataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattg 42937367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 576
Target Start/End: Original strand, 511415 - 511506
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatg 576  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||| |||||||||||||||| ||| ||| | ||||||| ||||||||||||    
T  511415 tactcctggttctgctgatgctgctggtgccacctcctcggcctttggcctcgcctcctggtcaagatcggtgcgatctactccctaacatg 511506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 612 - 703
Target Start/End: Original strand, 8577462 - 8577553
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || |||||| ||||| | |||||||||||||| |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  8577462 cctcctggcctaactgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 8577553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 28238544 - 28238747
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| ||||| || ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | ||||||    
T  28238544 tggtgcctcctccccggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgagggctca 28238643  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  28238644 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 28238743  T
Q  700 ccac 703  Q
    ||||    
T  28238744 ccac 28238747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 760 - 847
Target Start/End: Original strand, 40623144 - 40623231
Alignment:
Q  760 gctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatc 847  Q
    ||||||||||||| | ||||||||||||||||||||||||||| || || | ||||||||||||||||||||| ||||  ||||||||    
T  40623144 gctcaccccaatcaggctccttaagcgtgtgagtgcggaagtcaacaaatgtctgcacaatctgaggcggtggcagctttacaacatc 40623231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 739 - 820
Target Start/End: Original strand, 8577669 - 8577750
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaat 820  Q
    ||||||||| ||||  |||||||| ||||| |||| || |||||| |||||||||||||||||||||||| |||||||||||    
T  8577669 gccatgtctcctctcctgcctgctgaccccgatcgtccgccttaatcgtgtgagtgcggaagtcgacgaacgcctgcacaat 8577750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 28879850 - 28879641
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  28879850 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatggatcatggcctcaaaccactgctgag 28879751  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | |||| ||||||||| |||||||||||  | || |||| |||| ||||| |||| ||    
T  28879750 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggtaacaacgccactaaccatgtcgtaggtgtcagacgagtttctcacctcata 28879651  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  28879650 ccgctcccac 28879641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 19038097 - 19038177
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  19038097 aactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 19038177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 19038293 - 19038433
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  ||||||||||||||   || || |||||||||||||||||| ||||||||||||   |||||||||   ||||||||| || ||    
T  19038293 gccatgtctcctctcctgcctgctcaccccgggcgtccgccttaagcgtgtgagtgccgaagtcgacgaacatctgcacaatggaaggcggtgggaggtc 19038392  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
       |||||||||| ||||||| ||||  ||||| |||||||    
T  19038393 cctaacatcagtcggatgtctggggatggtctgcacgtatc 19038433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 755 - 820
Target Start/End: Complemental strand, 28879509 - 28879444
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaat 820  Q
    |||||||||| ||| |||| || |||||| ||||||||||||||||||||||||  ||||||||||    
T  28879509 tgcctgctcatcccgatcgtccgccttaatcgtgtgagtgcggaagtcgacgaacacctgcacaat 28879444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 7761787 - 7761711
Alignment:
Q  511 gtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| |||||||| |||||||||||||||||||| ||| ||| | |||||||||||| | | ||||| ||||||||    
T  7761787 gtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggtgcgatctgctccttcatatggctcatggcct 7761711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 28238879 - 28239003
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||| | | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  28238879 tgcctgctcacctcgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 28238978  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  28238979 tgtctggggatggtctgcacgtatc 28239003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 808
Target Start/End: Complemental strand, 30707958 - 30707905
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaa 808  Q
    |||||||||||||| |||| || |||||| |||||||||||||||||| |||||    
T  30707958 tgcctgctcaccccgatcgtccgccttaatcgtgtgagtgcggaagtcaacgaa 30707905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 589
Target Start/End: Original strand, 8577344 - 8577430
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctca 589  Q
    ||||| ||||||| |||||||| ||| ||| |||||||||||| ||| ||| || |||| |||||||| | ||||  ||||||||||    
T  8577344 tgctgatggtgcctcctcctcggcctttgggctcgcctcctggtcaaaatcggcacgatttgctccctcatatgggtcatggcctca 8577430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 19228782 - 19228712
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatg-cccttcggcagttaa 205  Q
    ||||||| ||||||||| |  | ||||| ||| |||||||||||||||||||||| ||| |||||||||||    
T  19228782 aattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaa 19228712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 136 - 619
Target Start/End: Original strand, 25514490 - 25514975
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgaggcatc-taaaggtataaaatgg 234  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||  |||||||||    
T  25514490 aattgttcttgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatatccttcggcagttaattgtcgaggcatcctgaagccataaaatgg 25514589  T
Q  235 cagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------ttcaatgtcaaatcataaagtcaatcaaagaaaattaccaac 323  Q
     | ||||||||||||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||| ||||||||||| ||||||||    
T  25514590 taaaacctcttgaggcagaacctgttacatgtgtttttacacattgtaaaaacattgtttcaatgccaaatcataaagttaatcaaagaaa-ttaccaac 25514688  T
Q  324 ataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatg 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||| ||||||| |    
T  25514689 ataattgaaattgaaaatatgatacggaaacgaacaattgtcataaaaatatgtcattgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacg 25514788  T
Q  424 gccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctc 523  Q
    ||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||         ||||||||    
T  25514789 gccaaatgtcatgaaaatatacatcaagtcctaaaaatatatcctaaacataaaatactactactcctggtcctgctgatgct---------gcctcctc 25514879  T
Q  524 gacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctga 619  Q
    | |||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||||||||| | |||||||||| ||||||    
T  25514880 ggcctctggcctcgcctcctggccaatatcggcgcgatctgctccataacatagcacatggcctcagtccattgcttagggctcatcacttcctga 25514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 273 - 703
Target Start/End: Complemental strand, 7417261 - 7416825
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||    
T  7417261 acacattgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatatggaaacgaacaattatcataaata 7417162  T
Q  373 tatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaac 472  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7417161 tatgtcatcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacggccaaatatcatgaaaatatacaccaagtcatgaaaatatatcctaaac 7417062  T
Q  473 ataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaa 572  Q
    ||||||||||| ||||| ||||||| |||||| || ||||||| |||||||| |||||||||||||||||||   |  ||| ||||||| |||| |||||    
T  7417061 ataaaatactactactcctggtcctactgatgttgttggtgcctcctcctcggcctctggcctcgcctcctgataatgatcggcgcgatttgctgcctaa 7416962  T
Q  573 catggcgcatggcctcagtccattgctcatg------gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcaca 666  Q
    |||   ||| |||| ||  | | |||| | |      ||||||||||||||||| |||    |||||| ||| ||||||| ||||  |||| || ||| |    
T  7416961 catcatgcaaggccgcatacaactgctgaggggtcatgctcatcacctcctgacacaaaaagtcatcagcatgggcaacatcgccagtaactatatcata 7416862  T
Q  667 agtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
     ||||||||||||||||||||||||||||||||||||    
T  7416861 ggtatcaggcgagcttctcgcctcgtaccgctcccac 7416825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 7189778 - 7189600
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||||| |||| | ||| |||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||    
T  7189778 caccctagtgtaccatagcatatagccatccgtcatcagccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtacggaag 7189679  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||||||||| | |||| |||| || || |||||||||||| ||||||| ||||  |||||||||||||    
T  7189678 tcgacgaacgcctgcacaatgtaaggcagtgggaggtctacaacatcagtcggatgtctggggatggtctggacgtatc 7189600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 711 - 887
Target Start/End: Original strand, 36653598 - 36653774
Alignment:
Q  711 taccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaag 810  Q
    ||||||| ||||||| | ||| ||||   |||||||||||||  || ||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  36653598 taccataacacatagccatccgtcatccaccatgtctgctctcctgtctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaatg 36653697  T
Q  811 cctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    ||| ||||| |||||||||||  ||||| |||||||| ||| ||||||| ||||| |||||||||||||||| ||||    
T  36653698 ccttcacaaactgaggcggtgacagctctacaacatcggtcggatgtctggggacggtctggacgtatctgtactgc 36653774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 29398697 - 29398875
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||||||||||||| |||  |||  ||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||    
T  29398697 caccctagtgtaccatagcacatagtcatccgccatccgccatgtctgctctcctgcctgctcaccccaatcgtccgccttaagcgtgtgagtgcggaag 29398796  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||||||||| | ||||||||| |  || |||||||| ||| ||||||| ||||  ||| |||||||||    
T  29398797 tcgacgaacgcctgcacaatgtaaggcggtggcaagtctacaacatccgtcggatgtctggggatggtcaggacgtatc 29398875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 39950459 - 39950281
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||| |||||| | |||  |||  ||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||    
T  39950459 caccctagtgtaccataggacatagccatccgccatccgccatgtctgctctcctgcctgctcaccccaatcgtccgccttaagcgtgtgagtgcggaag 39950360  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||| ||||| | ||||||||| || ||  ||||||||||| |||||||  |||  |||||||||||||    
T  39950359 tcgacgaacgcctgtacaatgtaaggcggtgggaggtctgcaacatcagtcggatgtctgcggatggtctggacgtatc 39950281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 559 - 680
Target Start/End: Original strand, 20067329 - 20067450
Alignment:
Q  559 gatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaacc 658  Q
    |||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  | |||    
T  20067329 gatcagctccctaacatgacccatggccgcagaccattgctcatggctcatcacctcctgacccaactgctcatcaacataggaaacaactccaattacc 20067428  T
Q  659 atgtcacaagtatcaggcgagc 680  Q
    | |||| | |||||||||||||    
T  20067429 acgtcataggtatcaggcgagc 20067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 491 - 587
Target Start/End: Original strand, 6637885 - 6637981
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  6637885 tggtcctgctgatgctgctggtgcctcctcctcggcctctggtctcccctcctggtcaatatcggcgcgatctgctccctaacatggctcatggcct 6637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 10826041 - 10826181
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    |||||||||||| |  ||||||||||||||||||| || |||||||| |||||||||||||||||||||| ||||||||||| | ||||||||| || ||    
T  10826041 gccatgtctgctattctgcctgctcaccccaatcgtccgccttaagcatgtgagtgcggaagtcgacgaacgcctgcacaatgtaaggcggtggcaggtc 10826140  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| |||||||  |||  |||||||||||||    
T  10826141 tacaacatccgtcggatgtctgcggatggtctggacgtatc 10826181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 741 - 879
Target Start/End: Complemental strand, 40538464 - 40538326
Alignment:
Q  741 catgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaa 840  Q
    ||||||| ||||  ||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||| || |||||  ||||| |    
T  40538464 catgtctcctctcctgcatgctcaccccaatcggccgccttaagcgtgtgagtgtggaagtcgacaaaagcctacacaatctcagccggtgacagctcta 40538365  T
Q  841 caacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||| ||   ||||||||||||||  |||||||||||||    
T  40538364 caacctccaacagatgtctagggatggtctggacgtatc 40538326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 734 - 879
Target Start/End: Complemental strand, 7416714 - 7416569
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||| ||||  ||| |||||||| ||||||||  ||||||||||||||||||||||||||| |||||  |||||||||| || |||||      
T  7416714 catatgccatgtctcctctcctgcatgctcaccgcaatcggctgccttaagcgtgtgagtgcggaagtcgaagaaagtatgcacaatctcagtcggtgac 7416615  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||| |||||||| | | ||||||||||||| |||||||| ||||    
T  7416614 agctctacaacatccgacggatgtctagggacggtctggacatatc 7416569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 226 - 381
Target Start/End: Complemental strand, 15547163 - 15546997
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------ttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||           ||||||| ||||| ||||| | ||| || | ||    
T  15547163 ataaaatggaagaacctattgaggtagaacctgttacatgtgtttttacacattgtaaacacattgtttcaatgccaaataataaatttaataaacggaa 15547064  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatc 381  Q
    ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||| | || |||||||    
T  15547063 attaccaacataatttaaattgaaaatttgatacgaaaaccaacaattgtcatagaaatgtgtcatc 15546997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 505 - 703
Target Start/End: Original strand, 36653303 - 36653510
Alignment:
Q  505 ctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg 604  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||| ||||||| ||||||||||| || ||||| |||||||| |  ||| |||| | ||    
T  36653303 ctgctggtgcctcctcctcggcctctagcctcgcctcctggtcaagatcagcgagatctgctcccaaagatggctcatggcctgaaaccactgctgaggg 36653402  T
Q  605 ctca---------tcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtacc 695  Q
     |||         || |||| || || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||| ||| ||||    
T  36653403 gtcatgatcatgttctcctcttggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgtctcctacc 36653502  T
Q  696 gctcccac 703  Q
    ||||||||    
T  36653503 gctcccac 36653510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 28471782 - 28471571
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcc--tggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctc 600  Q
    ||||| ||||||| |||||||| ||||||| |||||||||  | | ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| ||||     
T  28471782 tgctgatggtgcctcctcctcggcctctgggctcgcctccctttgtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctg 28471683  T
Q  601 atggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcg 691  Q
    | || ||||         | ||||||| || |||||| ||||||| ||||||||| |||| |||||||||||| | || ||||||||||||||||||||     
T  28471682 aggggtcatgctcatgacctcctcctggcctaactgcgcatcaacgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctca 28471583  T
Q  692 taccgctcccac 703  Q
    ||||||||||||    
T  28471582 taccgctcccac 28471571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 7417466 - 7417403
Alignment:
Q  142 tattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7417466 tattgacagatcttattaggcttagaaacacaagtaaaatacgtaaatgtccttcggcagttaa 7417403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 30493772 - 30493975
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  30493772 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 30493871  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  30493872 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 30493971  T
Q  700 ccac 703  Q
    ||||    
T  30493972 ccac 30493975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 40538786 - 40538568
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||  |  ||| | |||||||||| ||||||||   |||  ||| ||     
T  40538786 tggtcctgcttatgctgctggtgcctcctcctcggcctctggcctcgcctactggtaatgatcggtgcgatctgctgcctaacatcatgcaaagccgcat 40538687  T
Q  591 tccattgctcatgg------ctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     | | |||| | ||      ||||||||||||| ||||||   ||||||| ||| ||||||||||||||||||  ||||| |||||| | ||||| ||||    
T  40538686 acaactgctgaggggtcatgctcatcacctcctaacccaaaaactcatcagcatgggcaacaacgccgctaacattgtcataagtataaagcgagtttct 40538587  T
Q  685 cgcctcgtaccgctcccac 703  Q
    ||||||||| |||||||||    
T  40538586 cgcctcgtatcgctcccac 40538568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 43536515 - 43536718
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg---- 604  Q
    ||||||| |||||||  ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | ||        
T  43536515 tggtgcctcctcctcagcctctggactctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 43536614  T
Q  605 --ctcatcacctcctga---cccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
      ||||| ||||||| |   || |||||| ||||| | |||||||||||||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  43536615 tgctcatgacctcctcatggcctaactgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 43536714  T
Q  700 ccac 703  Q
    ||||    
T  43536715 ccac 43536718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 517 - 703
Target Start/End: Complemental strand, 43981759 - 43981564
Alignment:
Q  517 cctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat------- 609  Q
    |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || ||||           
T  43981759 cctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtcatgctcatg 43981660  T
Q  610 --cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
      | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  43981659 acctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 43981564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 757 - 882
Target Start/End: Complemental strand, 28471437 - 28471312
Alignment:
Q  757 cctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatg 856  Q
    |||||||||||| |||| || |||||| ||||||||||||||||||||||||  ||||||||||   || |||||| || ||   |||||||||| ||||    
T  28471437 cctgctcaccccgatcgtccgccttaatcgtgtgagtgcggaagtcgacgaacacctgcacaatggaagacggtgggagatccctaacatcagtcggatg 28471338  T
Q  857 tctagggactgtctggacgtatctgt 882  Q
    ||| ||||  ||||| ||||||||||    
T  28471337 tctggggatggtctgcacgtatctgt 28471312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 499 - 587
Target Start/End: Complemental strand, 39950744 - 39950656
Alignment:
Q  499 ctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||||||| |||||||| |||||||  ||||||||||| ||| ||| |||||||||||||||| | ||||| ||||||||    
T  39950744 ctgatcctgctggtgcctcctcctcggcctctgggttcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcct 39950656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 612 - 703
Target Start/End: Complemental strand, 5355105 - 5355014
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  5355105 cctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 5355014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 760 - 882
Target Start/End: Original strand, 20067607 - 20067729
Alignment:
Q  760 gctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtct 859  Q
    ||||||||||||||  |||||||| ||||| ||| |||||||| | ||| |||||||||||||||    || | ||||||||||||||  || |||||||    
T  20067607 gctcaccccaatcgagctccttaatcgtgtcagtacggaagtcaaggaatgcctgcacaatctgatcttgtcgcagctcaacaacatccatcggatgtct 20067706  T
Q  860 agggactgtctggacgtatctgt 882  Q
    ||||||  |||||| ||||||||    
T  20067707 agggacgttctggatgtatctgt 20067729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 704
Target Start/End: Original strand, 29398539 - 29398620
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccacc 704  Q
    |||||| ||||| | ||||||||| |||||  |||||||||| | || |||||||||||||||||||| |||||||||||||    
T  29398539 aactgcgcatcagcgtaggcaacagcgccgtaaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccacc 29398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 755 - 864
Target Start/End: Original strand, 43536850 - 43536959
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||||||    
T  43536850 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcaga 43536949  T
Q  855 tgtctaggga 864  Q
    ||||| ||||    
T  43536950 tgtctgggga 43536959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 512 - 703
Target Start/End: Original strand, 10825732 - 10825932
Alignment:
Q  512 tgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat-- 609  Q
    |||| |||||||| ||||||| |||||||||||| ||| |||| ||||||||||||||| | ||||| |||||||| |  ||| |||| | || ||||      
T  10825732 tgcctcctcctcggcctctggtctcgcctcctggtcaaaatcaacgcgatctgctccctcatatggctcatggcctgaaaccactgctgaggggtcatgc 10825831  T
Q  610 -------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctccca 702  Q
           | |||| || || |||||| ||||||| ||||||||||| ||   |||||||||| | || ||||| |||||||||||||| ||||||| |||    
T  10825832 ccatgaactcctcttggcctaactgcgcatcaacgtaggcaacaacaccataaaccatgtcataggtgtcaggtgagcttctcgcctcataccgcttcca 10825931  T
Q  703 c 703  Q
    |    
T  10825932 c 10825932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 15834167 - 15834043
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  15834167 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 15834068  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  15834067 tgtctggggatggtctgcacgtatc 15834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 17423393 - 17423253
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  ||||||||||||||   || || |||||||||||||||||| ||||||||||||   |||||||||   ||||||||| || ||    
T  17423393 gccatgtctcctctcctgcctgctcaccccgggcgtccgccttaagcgtgtgagtgccgaagtcgacgaacatctgcacaatggaaggcggtgggaggtc 17423294  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
       |||||||||| ||||||| ||||  ||||| |||||||    
T  17423293 cctaacatcagtcggatgtctggggatggtctgcacgtatc 17423253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 30494107 - 30494231
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  30494107 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 30494206  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  30494207 tgtctggggatggtctgcacgtatc 30494231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 45431416 - 45431292
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||| ||||||||||||||||| ||||||  ||||||||||   ||||||||| || ||   |||||||||  ||    
T  45431416 tgcctgctcaccccgatcgtccgccttaatcgtgtgagtgcggaagttgacgaacacctgcacaatggaaggcggtgggaggtccctaacatcagtagga 45431317  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  45431316 tgtctggggatggtctgcacgtatc 45431292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 15834502 - 15834299
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||   |||||||||  | | |||| | || |||    
T  15834502 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggttatggcctcaaacgactgctgaggggtca 15834403  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || ||||||||| |||||||||| |||||||     
T  15834402 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagtttctcgcctcataccgctg 15834303  T
Q  700 ccac 703  Q
    ||||    
T  15834302 ccac 15834299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 43981432 - 43981308
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || ||||||||||||||||||||||||||| |||   |||||||||   |||||| || || ||   |||||||||| ||    
T  43981432 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgatgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 43981333  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  43981332 tgtctggggatggtctgcacgtatc 43981308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 623 - 690
Target Start/End: Complemental strand, 39950611 - 39950544
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctc 690  Q
    |||||| ||||| | |||||||||||||| |||||||||||| | || |||| |||||||||||||||    
T  39950611 aactgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcagacgagcttctcgcctc 39950544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 40539230 - 40539183
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  40539230 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaatac 40539183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 281
Target Start/End: Complemental strand, 7417298 - 7417264
Alignment:
Q  247 aggcagaacctgttacatgtgtttttacacattgt 281  Q
    |||||||||||||||||||||||||||||||||||    
T  7417298 aggcagaacctgttacatgtgtttttacacattgt 7417264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 570
Target Start/End: Original strand, 3938350 - 3938411
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccct 570  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||||    
T  3938350 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccct 3938411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 804
Target Start/End: Complemental strand, 5354882 - 5354833
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcga 804  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||    
T  5354882 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcga 5354833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 29398410 - 29398494
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| |||||||| ||||||||||| |||||||| ||| ||| ||  ||| |||||||| | ||||| ||||||||    
T  29398410 tgctgatggtgcctcctcctcggcctctggcctcacctcctggtcaaaatcggcatgatatgctccctcatatggctcatggcct 29398494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 703
Target Start/End: Complemental strand, 17423564 - 17423509
Alignment:
Q  648 cgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  17423564 cgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 17423509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 31568706 - 31568639
Alignment:
Q  147 acacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    |||||| ||||| |||| ||||||||| |||||||||  |||| ||| ||||||||||||| ||||||    
T  31568706 acacatgttgtttggctgagaaacacatgtaaaatactaaaatacccctcggcagttaattatcgagg 31568639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 589
Target Start/End: Complemental strand, 17423706 - 17423620
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctca 589  Q
    ||||| ||||||| || ||||| ||||||| ||| |||||||| ||  ||| |||||||||||||||| | ||||  ||||||||||    
T  17423706 tgctgatggtgcctccgcctcggcctctgggctctcctcctggtcagaatcggcgcgatctgctccctcatatgggtcatggcctca 17423620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 698
Target Start/End: Complemental strand, 45431603 - 45431553
Alignment:
Q  648 cgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgct 698  Q
    |||| |||||||||||| | || |||||||||||||||||||| |||||||    
T  45431603 cgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgct 45431553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 4286032 - 4286101
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||| ||||||||| ||||| |||| |||||||| |||||| |||  |||| ||| |||||||||||    
T  4286032 aattgttgttgacacatgttgtttggctgagaaacacgagtaaattactcaaatacccatcggcagttaa 4286101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 273 - 703
Target Start/End: Complemental strand, 41735204 - 41734771
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| |||    
T  41735204 acacattctttcaatgtcaaatcataaagtcaatcaaagaaaattactaacataattgaaattgaaaatatgatatggaaacaaacaattgtcataaata 41735105  T
Q  373 tatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaac 472  Q
    |||||| || |||||||||||||| |||||||||||||||| ||||||| ||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  41735104 tatgtcgtcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacggctaaatgtcatgaaaatatacaccaagtcatgaaactatatcctaaac 41735005  T
Q  473 ataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaa 572  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||| ||  |||||||||||| ||| ||| |||||||||| |||||||    
T  41735004 ataaaatactactactcctggtcctgctgatgctgctggtgcctcctccttgacctatgaactcgcctcctggtcaagatcggcgcgatctgttccctaa 41734905  T
Q  573 catggcgcatggcctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagt 669  Q
    |||||  |||||||| |  ||| |||| | |||||||   | |||||||||| |  ||| ||||| | |||||||||||| | |||||||||||| | ||    
T  41734904 catgggtcatggcctgaaaccactgctgaaggctcatgacctcctcctgacctatatgcgcatcagcgtaggcaacaacgacactaaccatgtcataggt 41734805  T
Q  670 atcaggcgagcttctcgcctcgtaccgctcccac 703  Q
     |||| |||||||||| |||||||||||||||||    
T  41734804 gtcagacgagcttctcacctcgtaccgctcccac 41734771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 226 - 413
Target Start/End: Complemental strand, 37345055 - 37344862
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacat------gtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattac 319  Q
    |||||||||||||||||||||||| ||||||||||||||      |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37345055 ataaaatggcagaacctcttgaggtagaacctgttacatatgcatgtgtttttacacattgtttcaatgccaaatcataaagtcaatcaaagaaaattac 37344956  T
Q  320 caacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaata 413  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||    
T  37344955 caacataattgaaattgaaaatatgatacgaaaacgaacaattgtcataaatatatgtcgtcgaaacaaagtaacaacaaatgtcatgaaaata 37344862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 229 - 513
Target Start/End: Original strand, 11629854 - 11630148
Alignment:
Q  229 aaatggcagaacctcttgaggcagaacctgttacatgtgttttt------------acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaat 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  11629854 aaatggcagaacctcttgaggcagaacctgttacatgtgttttttacacattgtaaacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaat 11629953  T
Q  317 taccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaa------aacaaagtaacaataaatgtcatgaaa 410  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||| |      |||||||||||   |||||||||||||    
T  11629954 taccaacataattgaaattgaaaatatgatacgaaaacgaacaattgtcataaaaatatgtcatcgaaataccaacaaagtaac---aaatgtcatgaaa 11630050  T
Q  411 ataaaacgaaatg-gccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgct 509  Q
    ||| |||| || |  | || |||||| ||||||||||||||||| | ||||| |||| ||||||||||||||||      ||||| ||||||||||||||    
T  11630051 atataacggaacgaacaaaatgtcataaaaatatacaccaagtcctaaaaatctatcataaacataaaatacta------ttggttctgctgatgctgct 11630144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 409 - 699
Target Start/End: Complemental strand, 37343590 - 37343297
Alignment:
Q  409 aaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgc 508  Q
    ||||| ||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |    
T  37343590 aaatacaacgaaacgatcaaatgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcatggtcttgctgatgctac 37343491  T
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||| ||| | |||||||||||||||| | ||| ||| |||||||||||| ||||||||||  ||||| || |  ||| || | | ||||||    
T  37343490 tggtgcctcctcatcggcttctggcctcgcctcctagtcaagatcggcgcgatctgcttcctaacatgggtcatggtctgaaaccactgttgagggctca 37343391  T
Q  609 t---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |   | |||||||||| | |||| ||||| | |||||||||||| | |||||||||||| | || ||||||||||||||||||| |||||||||    
T  37343390 tgacctcctcctgacctatctgcgcatcagcgtaggcaacaacgacactaaccatgtcataggtgtcaggcgagcttctcgccttgtaccgctc 37343297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 37343215 - 37343037
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37343215 caccttagtgtaccataacacatagccctccctcatatgccatgtctgctctgctgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 37343116  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |  ||||| | ||||||||||||||||||||  ||||| |||||||| | | |||||||||||  ||||||||||||||    
T  37343115 tatacgaatgtctgcacaatctgaggcggtgtcagctctacaacatccgccggatgtctagggtttgtctggacgtatc 37343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 739 - 888
Target Start/End: Complemental strand, 34741655 - 34741506
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  34741655 gccatgtctgctctcctgcctgctcaccccaatcggctgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtgaggcggtggcagctc 34741556  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgct 888  Q
     |||||||| ||||||||||| ||||| ||||||||||||| || |||||    
T  34741555 tacaacatccgtcagatgtctggggacggtctggacgtatccgtactgct 34741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 701 - 878
Target Start/End: Complemental strand, 16680424 - 16680247
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  |||  |||| |||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||    
T  16680424 caccctagtgtaccataacacatagccatccgccatccgccaagtctgctctcctgcctgctcaccctaatcggccgccttaagcgtgtgagtgcggaag 16680325  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| | ||||||||||    
T  16680324 tcgacgaatgcctgcacaatctgaggcggtggcagctcgacaacatccgtcggatgtctggggacaggctggacgtat 16680247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 701 - 878
Target Start/End: Complemental strand, 17654660 - 17654483
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  |||  |||| |||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||    
T  17654660 caccctagtgtaccataacacatagccatccgccatccgccaagtctgctctcctgcctgctcaccctaatcggccgccttaagcgtgtgagtgcggaag 17654561  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| | ||||||||||    
T  17654560 tcgacgaatgcctgcacaatctgaggcggtggcagctcgacaacatccgtcggatgtctggggacaggctggacgtat 17654483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 701 - 863
Target Start/End: Original strand, 5538643 - 5538805
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||||||||||| | |||  |||  ||||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||    
T  5538643 caccctagtgtaccatagcacatagccatccgccatccgccatgtctgctctcctgcctgctcaccccaatcggccgccttaagtgtgtgagtgcggaag 5538742  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctaggg 863  Q
    |||||||| ||||||||||| ||||||| ||| ||||| ||||||||  || |||||||||||    
T  5538743 tcgacgaacgcctgcacaatgtgaggcgatggcagctctacaacatccatcggatgtctaggg 5538805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 516 - 694
Target Start/End: Original strand, 17747511 - 17747689
Alignment:
Q  516 gcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctc 615  Q
    ||||||||| |||  || ||||||| |||| ||||||| | ||  |||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||    
T  17747511 gcctcctcggcctacgggctcgccttctggtcaatatcggtgcattctgctccctaacatggcgcatggccgcagaccattgctcagggctcttcacctc 17747610  T
Q  616 ctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtac 694  Q
    ||||||||||||||||||| |||| | ||||||||| |||| ||| ||| ||| | ||||||||| |||||||||||||    
T  17747611 ctgacccaactgctcatcagcataagtaacaacgccactaaacatctcataagaagcaggcgagcctctcgcctcgtac 17747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 47521770 - 47521991
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |   |||||||||||||||||| ||||| |||||||| |     
T  47521770 tggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagacaggcgcgatctgctccctaagatggctcatggcctaaa 47521869  T
Q  591 tccattgctcatggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     ||| || | | || ||||         | ||||||| || |||||||||||| | ||||||||| |||| |||||||||||| | || |||||||||||    
T  47521870 accactgttgaggggtcatgctcgtgacctcctcctggcctaactgctcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagct 47521969  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||||||||||    
T  47521970 tctcgcctcataccgctcccac 47521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 766 - 878
Target Start/End: Original strand, 11630418 - 11630530
Alignment:
Q  766 cccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggac 865  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| |||||||||||||    
T  11630418 cccaatcggccgccttaagcgtgtgagtgcggaagtcaacgaatgcctgcacaatctgaggcggtggcagctctacaacatccgtcggatgtctagggac 11630517  T
Q  866 tgtctggacgtat 878  Q
     |||| |||||||    
T  11630518 ggtcttgacgtat 11630530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 13322961 - 13322821
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||  ||||||| ||| ||||||||||| ||||| ||||| |||||    
T  13322961 gccatgtctgctctcctgcctgctcaccccaatcggcccccttaagcgtgtgagtgctaaagtcgatgaacgcctgcacaatgtgaggtggtggcagctc 13322862  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||||||||  || ||||||| ||||| |||||||||||||    
T  13322861 tacaacatctttcggatgtctggggacggtctggacgtatc 13322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 847
Target Start/End: Original strand, 27450817 - 27450925
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||    
T  27450817 gccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggtggtgacagctc 27450916  T
Q  839 aacaacatc 847  Q
     ||||||||    
T  27450917 tacaacatc 27450925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 701 - 856
Target Start/End: Original strand, 47522069 - 47522224
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||||| |||  |||  |||||||||||| |  |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  47522069 caccctagtgtaccataacacatagtcatccgccatccgccatgtctgctttcctgcctgctcaccccaatcggccgccttaaacgtgtaagtgcggaag 47522168  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatg 856  Q
    |||| ||| ||||||||||||||||||||||  ||||| |||||||| ||||||||    
T  47522169 tcgaagaatgcctgcacaatctgaggcggtgacagctctacaacatcggtcagatg 47522224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 47669999 - 47670217
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||||||||| |||||||| |||||||| |||||||| |||||||||||  | |||| |||||||||| | ||||||||   ||| |||| ||     
T  47669999 tggtcctgctgatgctactggtgcctcctcctcggcctctggcatcgcctcctggtaattatcggcgcgatctggtgcctaacatcatgcaaggccgcat 47670098  T
Q  591 tccattgctcatgg------ctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     | | |||| | ||      ||||||||||||||||||||   ||||||  ||| ||||||| ||||||||||||||||| | |||||||||||||||||    
T  47670099 acaactgctgaggggtcatgctcatcacctcctgacccaaaaactcatcggcatgggcaacatcgccgctaaccatgtcataggtatcaggcgagcttct 47670198  T
Q  685 cgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||    
T  47670199 cgcctcgtaccgctcccac 47670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 34741958 - 34741764
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| ||| |||| || ||||||||||||||||| ||| ||| |||||||||||||||| | ||||| |||||||| |  ||| |||| | ||||||    
T  34741958 tggtgcctccttctcggcccctggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgagggctca 34741859  T
Q  609 tcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    | |||||||| |||| |||  ||||||| |||||||||||| | |||||||||||| | || |||| ||||||||||||||| |||| |||||||    
T  34741858 tgacctcctggcccatctgtgcatcaacgtaggcaacaacgacactaaccatgtcataggtgtcagacgagcttctcgcctcataccactcccac 34741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 16488631 - 16488416
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||| || ||||||||  ||| ||  |||||||||||||| | ||| ||||||| |||| ||||||||||||||| |||||||| |     
T  16488631 tggtcctgctgatgctgttgttgccgccttgtcggcccttggcctcgcctcctagtcaagatcagcgtgatcggctccctaacatggctcatggcctgaa 16488532  T
Q  591 tccattgctcatggctcatcacctcc---tgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | ||||||| ||||||   ||||||| |||  ||||| | |||||||||||| | |||||||||||| |  |||||||||||||||||||    
T  16488531 accactgttgagggctcatgacctcctcttgacccatctgtgcatcagcgtaggcaacaacgacactaaccatgtcatagctatcaggcgagcttctcgc 16488432  T
Q  688 ctcgtaccgctcccac 703  Q
     |||||||||||||||    
T  16488431 atcgtaccgctcccac 16488416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 733 - 879
Target Start/End: Complemental strand, 36980493 - 36980347
Alignment:
Q  733 tcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtgg 832  Q
    ||||| ||||||||||||||  ||  ||| ||||| |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||| || |||||     
T  36980493 tcatacgccatgtctgctctcctgtatgcacacccaaatcggccgccttaagtgtgtgagtgtgaaagtcgacgaaagcctgcacaatctcagtcggtga 36980394  T
Q  833 tagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||||| |||||||| | ||||||||||||||| |||||||||||||    
T  36980393 cagctctacaacatccgacagatgtctagggacagtctggacgtatc 36980347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 739 - 828
Target Start/End: Complemental strand, 41734699 - 41734610
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcg 828  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||    
T  41734699 gccatgtctgctctgctgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtctacgaatgcatgcataatctgaggcg 41734610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 10521757 - 10521617
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||||| ||||| | ||||||| | || ||    
T  10521757 gccatgtctgctctcctgcctgctcaccccaatcgtccgccttaagcgtgtgagtgcgaaagtcgacgaacgcctgtacaatgtcaggcggtcggaggtc 10521658  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
      ||||||||||| ||||||| ||||  |||||||||||||    
T  10521657 tgcaacatcagtcggatgtctggggatggtctggacgtatc 10521617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 36980804 - 36980601
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||||||| ||||||||| ||| |||||||||| |||||||| |     
T  36980804 tggtcctgctgatgctgttcgtgcctcctcctcggcctctggtctcgcctcctggccaatatcggcgcgatcttctctctaacatggctcatggcctaaa 36980705  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     |||||| | | |||||||   | ||||||| |||| |||  |||     |||       ||||||||||||||||| | ||||||||||||||||||||    
T  36980704 accattgttgagggctcatgacctcctcctggcccatctgtgcat-----tag-------cgccgctaaccatgtcataggtatcaggcgagcttctcgc 36980617  T
Q  688 ctcgtaccgctcccac 703  Q
    ||||||||||||||||    
T  36980616 ctcgtaccgctcccac 36980601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 17837887 - 17837747
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||| ||||||||||||||| |  |||||||||||| |||||||||||||||||| |||||||||||   ||||||||| || ||    
T  17837887 gccatgtctgctctcctgcttgctcaccccaatcgtctgccttaagcgtgtaagtgcggaagtcgacgaacgcctgcacaatggaaggcggtgggaggtc 17837788  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
      ||||||||||| ||||||| ||||  |||||||||||||    
T  17837787 tgcaacatcagtcggatgtctggggatggtctggacgtatc 17837747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 759 - 864
Target Start/End: Original strand, 9492010 - 9492115
Alignment:
Q  759 tgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtc 858  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| || |||||  ||||| |||||||| | | ||||||    
T  9492010 tgctcaccccaattggtcgccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctcagccggtgacagctctacaacatccgacggatgtc 9492109  T
Q  859 taggga 864  Q
    ||||||    
T  9492110 taggga 9492115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 273 - 385
Target Start/End: Original strand, 17747275 - 17747387
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| ||||||||||  | ||| | | |||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||| | |    
T  17747275 acacattgtttcaatgccaaatcataatattaataagataaaattaccaacataatttaaattgaaaatatgatacgaaaaccaacaactgtcatagaaa 17747374  T
Q  373 tatgtcatcaaaa 385  Q
    |||||||||||||    
T  17747375 tatgtcatcaaaa 17747387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 47670353 - 47670473
Alignment:
Q  759 tgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtc 858  Q
    ||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||| || |||||  ||||| ||||| || | | ||||||    
T  47670353 tgctcaccccaatcggccgacttaagcgcgtgagtgcggaagttgacgaaagcctgcacaatctcagccggtgacagctctacaacctccgacggatgtc 47670452  T
Q  859 tagggactgtctggacgtatc 879  Q
    |||| || |||||||||||||    
T  47670453 taggtacggtctggacgtatc 47670473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 787 - 878
Target Start/End: Original strand, 11632680 - 11632771
Alignment:
Q  787 tgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| |||| |||||||    
T  11632680 tgtgagtgcggaagtcaacgaatgcctgcacaatctgaggcggtggcagctctacaacatccgtcggatgtctagggacggtcttgacgtat 11632771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 27450484 - 27450701
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||| |||||||   |||||| |||||||||||||||||||| ||| ||  |||||||||||||||||| ||| | |||||||| |     
T  27450484 tggtcctgctgatgctgttggtgcc---tcctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctccctaagatgactcatggcctgaa 27450580  T
Q  591 tccattgctcatggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     ||| |||| | || ||||         | ||||||| || |||||||||| | | |||||||||||| | |||||||||||| | || |||||||||||    
T  27450581 accactgctgaggggtcatgctcatgacctcctcctggcctaactgctcataagcttaggcaacaacg-cactaaccatgtcataggtgtcaggcgagct 27450679  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||||||||||    
T  27450680 tctcgcctcataccgctcccac 27450701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 5538356 - 5538565
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| |||||||||||||||||||| ||| ||| |||||||||||||||| | ||||| |||||||| |  ||| |||| |     
T  5538356 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgag 5538455  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||  || |||||| ||||| | ||||||||||| || | |||||||||| | || |||||||||||||||||||| ||    
T  5538456 gggtcatgctcatgacctcctcctagcctaactgcgcatcagcgtaggcaacaacaccacaaaccatgtcataggtgtcaggcgagcttctcgcctcata 5538555  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  5538556 ccgctcccac 5538565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 16680717 - 16680502
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||| |||||||||||||| |||||||| |||||| ||||||||||||  ||| ||| ||||||||| |||||||| ||||| |||||||| |     
T  16680717 tggtcctgctaatgctgctggtgcctcctcctcggcctctgacctcgcctcctgatcaagatcggcgcgatctactccctaagatggctcatggcctgaa 16680618  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | |||||||   | ||||||| | ||  ||  ||||| | ||| ||||| || | |||||||||||| | || |||| ||||||||||||    
T  16680617 accactgttgagggctcatgacctcctcctggctcatttgtgcatcagcgtagacaacagcggcactaaccatgtcataggtgtcagacgagcttctcgc 16680518  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||| ||||    
T  16680517 ctcataccgcttccac 16680502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 17654953 - 17654738
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||| |||||||||||||| |||||||| |||||| ||||||||||||  ||| ||| ||||||||| |||||||| ||||| |||||||| |     
T  17654953 tggtcctgctaatgctgctggtgcctcctcctcggcctctgacctcgcctcctgatcaagatcggcgcgatctactccctaagatggctcatggcctgaa 17654854  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | |||||||   | ||||||| | ||  ||  ||||| | ||| ||||| || | |||||||||||| | || |||| ||||||||||||    
T  17654853 accactgttgagggctcatgacctcctcctggctcatttgtgcatcagcgtagacaacagcggcactaaccatgtcataggtgtcagacgagcttctcgc 17654754  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||| ||||    
T  17654753 ctcataccgcttccac 17654738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 9368213 - 9368416
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  9368213 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 9368312  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  9368313 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 9368412  T
Q  700 ccac 703  Q
    ||||    
T  9368413 ccac 9368416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 17460073 - 17460276
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| ||||||||  || ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  17460073 tggtgcctcctcctcggcctctgggctctcctcctggtaaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 17460172  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||||||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  17460173 tgctcatgacctcctcctggcctaactgctcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 17460272  T
Q  700 ccac 703  Q
    ||||    
T  17460273 ccac 17460276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 17593141 - 17592938
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| ||||||||  || ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  17593141 tggtgcctcctcctcggcctctgggctctcctcctggtaaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 17593042  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||||||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  17593041 tgctcatgacctcctcctggcctaactgctcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 17592942  T
Q  700 ccac 703  Q
    ||||    
T  17592941 ccac 17592938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 41883786 - 41883583
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  41883786 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 41883687  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  41883686 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 41883587  T
Q  700 ccac 703  Q
    ||||    
T  41883586 ccac 41883583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 48406604 - 48406401
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  48406604 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 48406505  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  48406504 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 48406405  T
Q  700 ccac 703  Q
    ||||    
T  48406404 ccac 48406401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 509 - 698
Target Start/End: Original strand, 35607202 - 35607400
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  35607202 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 35607301  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgct 698  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||    
T  35607302 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgct 35607400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 15071088 - 15071297
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||||   ||||  ||||||||||  ||| |||| |     
T  15071088 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcttatgggtcatggcctcaaaccactgctgag 15071187  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| | || |||||||||||| | || |||||||||||||||||||| ||    
T  15071188 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagctccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 15071287  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  15071288 ccgctcccac 15071297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 17838205 - 17837996
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||| ||| ||||||| |||| ||| |||||||||||||||||||| | ||||| |||||||| |  ||| |||| |     
T  17838205 tgctgatggtgccccctcctcggcctttgggctcgccttctggtcaaaatcagcgcgatctgctccctcatatggctcatggcctgaaaccactgctgag 17838106  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || || ||| ||||| | ||| ||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  17838105 gggtcatgctcatgacctcctcctggcctaagtgcgcatcagcgtagacaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 17838006  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  17838005 ccgctcccac 17837996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 42505080 - 42505204
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||||||   |||||||||   ||||||||| || ||   |||||||||| ||    
T  42505080 tgcctgctcaccccgatcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatgaaaggcggtgggaggtccctaacatcagtcgga 42505179  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  42505180 tgtctggggatggtctgcacgtatc 42505204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 612 - 703
Target Start/End: Original strand, 42504857 - 42504948
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || || ||| ||||| | |||||||||||||| |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  42504857 cctcctggcctaattgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 42504948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 15071429 - 15071553
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||||| ||||||||||||||||||||||   |||||||||   ||||||||| || ||   |||||||||| ||    
T  15071429 tgcctgctcaccccgatcgtccgccttaagcatgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggtgggaggtccctaacatcagtcgga 15071528  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  15071529 tgtctggggatggtctgcacgtatc 15071553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 273 - 381
Target Start/End: Complemental strand, 16488857 - 16488749
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| ||||||||||| | ||| ||   ||||||||||||||||| ||||||||||| ||||||| |||  || |||||||||| | |    
T  16488857 acacattgtttcaatgccaaatcataaatttaataaacagaaattaccaacataatttaaattgaaaatttgatacgaaaaacaataattgtcatagaaa 16488758  T
Q  373 tatgtcatc 381  Q
    | |||||||    
T  16488757 tgtgtcatc 16488749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 491 - 575
Target Start/End: Original strand, 9491784 - 9491868
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacat 575  Q
    ||||||||||| ||||| ||||||| |||||||| ||| ||||||||||||||||  |  ||| |||||||||||| ||||||||    
T  9491784 tggtcctgctggtgctggtggtgcctcctcctcggcctttggcctcgcctcctggtaatgatcggcgcgatctgctgcctaacat 9491868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 17460408 - 17460532
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  17460408 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 17460507  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  17460508 tgtctggggatggtctgcacgtatc 17460532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 17592806 - 17592682
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  17592806 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 17592707  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  17592706 tgtctggggatggtctgcacgtatc 17592682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 35607537 - 35607661
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  35607537 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 35607636  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  35607637 tgtctggggatggtctgcacgtatc 35607661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 41883451 - 41883327
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  41883451 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 41883352  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  41883351 tgtctggggatggtctgcacgtatc 41883327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 48406269 - 48406145
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  48406269 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 48406170  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  48406169 tgtctggggatggtctgcacgtatc 48406145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 612 - 703
Target Start/End: Complemental strand, 10521964 - 10521873
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || ||| || ||||| | |||||||||||||  |||||||||||| | || ||||||||||||||| |||| ||||||||||||    
T  10521964 cctcctggcctaaccgcgcatcagcgtaggcaacaacgctactaaccatgtcataggtgtcaggcgagcttctcacctcataccgctcccac 10521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 586
Target Start/End: Original strand, 22726568 - 22726638
Alignment:
Q  516 gcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcc 586  Q
    ||||| ||| |||| ||||||||||||||| ||||||  | |||||||||||||||| |||||||||||||    
T  22726568 gcctcttcggcctccggcctcgcctcctggtcaatatgggtgcgatctgctccctaaaatggcgcatggcc 22726638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 618 - 703
Target Start/End: Original strand, 22726642 - 22726727
Alignment:
Q  618 gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||||||| ||||| |||| ||||||||||   | ||||||||| | ||||||||||||| ||||||||||||| ||| ||||    
T  22726642 gacccaactgcacatcagcataagcaacaacgcaagttaccatgtcataggtatcaggcgagcctctcgcctcgtactgcttccac 22726727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 9368548 - 9368672
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    ||||||| |||||| | || || ||||||||||||||||||||||||||| |||   |||||||||   ||||||||| || ||   |||||||||| ||    
T  9368548 tgcctgcacaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgatgaacatctgcacaatggaaggcggtgggaggtccctaacatcagtcgga 9368647  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  9368648 tgtctggggatggtctgcacgtatc 9368672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 680
Target Start/End: Original strand, 5395022 - 5395219
Alignment:
Q  483 attactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcat 582  Q
    ||||||| |||| ||||| ||||| ||| ||  ||||||| | |||| |  |||||||| ||| |||||   | || |||||||| ||||||||| |||     
T  5395022 attactcctggttctgctcatgctcctgttgttgcctccttggcctccgagctcgcctcttggtcaatactggtgctatctgctctctaacatggagcaa 5395121  T
Q  583 ggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagc 680  Q
    |||  ||  | |||||||| |||| ||||||||||||||||| || |||| | | |||| ||||| ||| |||||||| ||| | ||||||| |||||    
T  5395122 ggcaacatacaattgctcagggcttatcacctcctgacccaagtgttcattagcgtaggaaacaatgccactaaccatatcataggtatcagacgagc 5395219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 491 - 577
Target Start/End: Complemental strand, 19801758 - 19801672
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatgg 577  Q
    ||||| ||||||| ||  ||||||| |||||||| |||||||||| ||| ||||| ||| |||  ||| ||||||||||||| ||||    
T  19801758 tggtcttgctgatactattggtgcctcctcctcggcctctggccttgccccctggtcaagatcgacgcaatctgctccctaagatgg 19801672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 248 - 587
Target Start/End: Complemental strand, 42760154 - 42759805
Alignment:
Q  248 ggcagaacctgttacatgtgtttttac-----------acattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattg 336  Q
    |||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  42760154 ggcagaacctgttacatgtgtttttacacgttgttaaaacattgtttcaatgtcaaatcataaagtcaatcaaag-aaattaccaacataattgaaactg 42760056  T
Q  337 aaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatg 436  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||| |||||||    
T  42760055 aaaatatgatacggaaacggacaattgtcataaatatatgtcatcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaacgaccaaatgtcatg 42759956  T
Q  437 aaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctc 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||||||    
T  42759955 aaaatatacaccaagtcatgaaaatatatcctaaacataaaatactactactcatggtcctgctaatgctgctggtgcctcctcctcggcctctggcctc 42759856  T
Q  537 gcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||| ||| ||| ||||||| |||||||| ||||||  ||||||||    
T  42759855 gcctcttggtcaagatcggcgcgatgtgctcccttacatgggtcatggcct 42759805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 229 - 690
Target Start/End: Original strand, 11380565 - 11381033
Alignment:
Q  229 aaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataat 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11380565 aaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataat 11380664  T
Q  329 tgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtc------atcaaaacaaagtaacaataaatgtcatgaaaataaaac-gaaa 421  Q
    ||||||| |||||||||||||||||||||||||||||||| | | | |||      ||  ||||||||||||   ||||||||| |||||| ||| |||     
T  11380665 tgaaattaaaaatatgatacggaaacgaacaattgtcatataaaaaggtcattgaaatacaaacaaagtaac---aaatgtcattaaaatacaacagaac 11380761  T
Q  422 tggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcc 521  Q
       | || |||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||    
T  11380762 gaacaaaatgtcatgaaaatatacaccaagtcctaaaaatctatcctaaacataaaatactactactcctggtcctgttgatgctgctggtgcctcctcc 11380861  T
Q  522 tcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcat---cacctcctg 618  Q
    ||| ||| ||||||||| |||| | ||| |||  ||||||||||||||||||||||  |||| ||| |  ||| |||| | | |||||   | |||||||    
T  11380862 tcggcctttggcctcgcttcctagtcaagatcgccgcgatctgctccctaacatgggtcatgacctgaaaccactgctgaggactcatgacctcctcctg 11380961  T
Q  619 acccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctc 690  Q
     || | |||| ||||| | |||||||||||| | |||||||||||| | || | ||||||||||| ||||||    
T  11380962 tcctatctgcgcatcagcgtaggcaacaacggcactaaccatgtcataggtgttaggcgagcttcacgcctc 11381033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 248 - 573
Target Start/End: Complemental strand, 18752248 - 18751920
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgata 347  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||| |  ||||||||||| |||||||||||||||||||||||||    
T  18752248 ggcagaacctgttacatgtgtttttacacattgtttcaatgccaaatgatgaagttaattagcgaaaattaccagcataattgaaattgaaaatatgata 18752149  T
Q  348 cggaaacgaacaattgtcatacatatatgtcatc------aaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaat 441  Q
    || ||||||||||||||||||||   ||||||||       ||||| ||||||   |||||||||||||||  |||  || |  ||| ||||||||||||    
T  18752148 cgaaaacgaacaattgtcatacaataatgtcatcgaaatacaaacagagtaac---aaatgtcatgaaaatgcaacagaacgaacaaatgtcatgaaaat 18752052  T
Q  442 atacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctc 541  Q
    |||||   |||| | ||||| ||||||||| | |||||| || ||||||||||| |||||||| || || |||| |||||||| ||||||||| ||  ||    
T  18752051 atacatatagtcctaaaaatctatcctaaatagaaaatattactactcttggtcttgctgatgttggtgttgcctcctcctcggcctctggccccgtttc 18751952  T
Q  542 ctggccaatatcagcgcgatctgctccctaac 573  Q
    |||| ||  ||| |||||||||||| ||||||    
T  18751951 ctggtcatgatcggcgcgatctgcttcctaac 18751920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 20353506 - 20353328
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  ||| |||||||||||||||  |||||||||||||||||||||| ||||||||||||||||| |||||    
T  20353506 caccctagtgtaccataacacatagccatccgccatcagccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgtggaag 20353407  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||  |||||||||||||    
T  20353406 tcgacgaatgcctgcacagtctgaggcggtggtagctctacaacatccgtcggatgtctagggatcgtctggacgtatc 20353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 488 - 703
Target Start/End: Complemental strand, 48891778 - 48891560
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||| |||||||||||||||| |||||||  |||||||||| |||| ||| ||||||||  |||||||||||| |||||||||| ||||||||    
T  48891778 tcttggtcctgatgatgctgctggtgcctcctcctcagcctctggccttgccttctgaccaatatcgacgcgatctgctctctaacatggctcatggcct 48891679  T
Q  588 cagtccattgctcatggctcatcacctc---ctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     |  |||||||| | ||||||| |||||   ||| | || |||  ||||| | ||||||||||||||||||||||||||| | |||||||||||||||||    
T  48891678 gaaaccattgctgagggctcatgacctccttctggctcatctgtgcatcagcgtaggcaacaacgccgctaaccatgtcataggtatcaggcgagcttct 48891579  T
Q  685 cgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||    
T  48891578 cgcctcgtaccgctcccac 48891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 17562431 - 17562609
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||||||||||| | ||   |||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  17562431 caccctagtgtaccatagcacatagccatctgccatacgccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaag 17562530  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||||| ||||||||||| || || ||  ||||| |||||||| | ||||||||||||||| |||||||||||||    
T  17562531 tcgacgaaagactgcacaatctaagacgatgacagctctacaacatccgacagatgtctagggacggtctggacgtatc 17562609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 734 - 879
Target Start/End: Complemental strand, 50759031 - 50758886
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||      
T  50759031 catacgccatgtctgctctcctgcatgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctcagccggtgac 50758932  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||| |||||||| | | ||||||||||||| |||||||||||||    
T  50758931 agctctacaacatccggcggatgtctagggacggtctggacgtatc 50758886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 739 - 887
Target Start/End: Complemental strand, 48565803 - 48565655
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  48565803 gccatgtctgctcttgtgcctgctcaccccattcgaccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggcggtggcagctc 48565704  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
     |||||||| ||| ||||||||  |||  ||||||||||||||| ||||    
T  48565703 tacaacatcggtcggatgtctaaagacgctctggacgtatctgtactgc 48565655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 733 - 879
Target Start/End: Complemental strand, 44232651 - 44232505
Alignment:
Q  733 tcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtgg 832  Q
    |||| |||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||||| |||||||   ||||| |||||||||||||||    
T  44232651 tcatcagccatgtatgctctcttgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagccgacgaatatctgcataatctgaggcggtgg 44232552  T
Q  833 tagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||||| |||||||| ||||||||||| ||||| |||||||||||||    
T  44232551 cagctctacaacatctgtcagatgtctggggacggtctggacgtatc 44232505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 41615195 - 41615056
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||    
T  41615195 gccatgtctgctctcctgcctgctcacccca-tcggccgccctaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggcggtgacagctc 41615097  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| | |||||||||||||||  ||||||||||||    
T  41615096 tacaacatccgccagatgtctagggaccctctggacgtatc 41615056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 739 - 876
Target Start/End: Original strand, 49266495 - 49266632
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    |||||||||||| |  ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||    
T  49266495 gccatgtctgctttcctgcctgctcaccctaatcggccaccttaagcgtgtgagtgcgaaagtcgacgaatgcctgcacaatctgaggcggtgacagctc 49266594  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgt 876  Q
     |||||||| ||||||||| | ||||| ||||||||||    
T  49266595 tacaacatccgtcagatgtttggggacggtctggacgt 49266632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 42759589 - 42759449
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  || |||||||||||||||| || ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  42759589 gccatgtctgctcttgtgtctgctcaccccaatcgaccaccttaagcgtgtgagtgcggaagtcgacgaatgcatgcacaatctgaggcggtggcagctc 42759490  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||  ||| |||||||||||||  |||||| |||||    
T  42759489 tacaacattcgtcggatgtctagggacgctctggatgtatc 42759449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 44232969 - 44232754
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||| ||| ||||| |||||||||||| |||||  ||||||| |     
T  44232969 tggtcctgctgatgctgctggtgcctcctcctcgacctatgggctcgcctcctggtcaagatcggcgcgttctgctccctaagatggcttatggcctgaa 44232870  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | |||||||   | ||||||| || || ||| ||||| | |||||||||||| | |||||||||||| | || ||||||||||||||| |    
T  44232869 accactgttgagggctcatgacctcctcctggcctaattgcacatcagcgtaggcaacaacggcactaaccatgtcataggtgtcaggcgagcttctcac 44232770  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||||||||    
T  44232769 ctcataccgctcccac 44232754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 734 - 879
Target Start/End: Complemental strand, 48891449 - 48891304
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| |||||| ||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| || || ||      
T  48891449 catacgccatgcctgctctcatgcatgctcactccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaaagtctgcacaatctcagccgatgac 48891350  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||| |||||||| | | ||||||||||||| |||||||||||||    
T  48891349 agctctacaacatccgacggatgtctagggacggtctggacgtatc 48891304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 372 - 685
Target Start/End: Complemental strand, 12374083 - 12373761
Alignment:
Q  372 atatgtcatcaaa--acaaagtaac-aataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcct 468  Q
    |||||||||||||  |||||| ||| || |||||||||||||||| ||||||| |  ||| |||||| ||||   |||||||||| | ||||| | |||     
T  12374083 atatgtcatcaaactacaaagaaactaagaaatgtcatgaaaatataacgaaacgaacaaatgtcataaaaactaacaccaagtcctaaaaatctgtccg 12373984  T
Q  469 aaacataaaatactattactcttggtcctgctgatgctgctggt------gccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatc 562  Q
    ||||||||||||||  ||||  || |||| || ||||| ||| |      || |||||||||||||| | ||||||||||||| |||||||   |  ||     
T  12373983 aaacataaaatactcctactgctgatcctactcatgctcctgctcggcatgctgcctcctcgacctccgacctcgcctcctggtcaatatcgatgatatt 12373884  T
Q  563 tgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgt 662  Q
    |||||||||||||||| ||||| | ||  |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||| |||| ||| |    
T  12373883 tgctccctaacatggcacatggtcgcataccattgctcagggctcatcacctcctgacctaactgctcaccaacataggcaacatcgccactaatcatct 12373784  T
Q  663 cacaagtatcaggcgagcttctc 685  Q
    || | ||||||| ||||| ||||    
T  12373783 cataggtatcagacgagcctctc 12373761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 741 - 887
Target Start/End: Complemental strand, 9473204 - 9473058
Alignment:
Q  741 catgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaa 840  Q
    ||||||| ||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||| |||| |||||| ||||  |    
T  9473204 catgtctcctctcctgcctgctcaccccaatcggccgccttaagcgtctgagtgcggaagtcgacgaacgcctggacaatgtgagacggtggcagctgta 9473105  T
Q  841 caacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||  || ||||||| ||||| |||||||||||||||| ||||    
T  9473104 caacatcgatcggatgtctggggacggtctggacgtatctgtactgc 9473058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 20353799 - 20353584
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||  ||| ||||||||||||||| || ||||  |||||||| |     
T  20353799 tggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgtctcctggtcatgatcggcgcgatctgctccccaagatgggtcatggcctgaa 20353700  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | |||||||   | ||||||| || |||||| ||||| | || ||||||||| | |||||||||||| | || ||||||||||||||||     
T  20353699 accactgatgagggctcatgacctcctcctggcctaactgcgcatcagcgtaagcaacaacgacactaaccatgtcataggtgtcaggcgagcttctcgt 20353600  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||||||||    
T  20353599 ctcataccgctcccac 20353584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 740 - 887
Target Start/End: Original strand, 42805088 - 42805235
Alignment:
Q  740 ccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctca 839  Q
    |||||||| |||| |||| ||||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||| ||||   |||||     
T  42805088 ccatgtctcctctcatgcatgctcaccccaatcgcccgccttaagcgtacgagtgcggaagtcgacgaaagcctgcacaatctgagccggtaacagctct 42805187  T
Q  840 acaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||| | | ||||||||||||| ||| | |||||||||| ||||    
T  42805188 acaacatccgacggatgtctagggacggtccgaacgtatctgtactgc 42805235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 739 - 887
Target Start/End: Complemental strand, 36130412 - 36130264
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||| ||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| | |||  |||| |||||    
T  36130412 gccatgtatgctctcctgcctgctcaccccaatcgtccgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaagggagtgggagctc 36130313  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
     |||||||| ||  ||||||| ||||  ||||| |||||||||| ||||    
T  36130312 tacaacatccgtgggatgtctggggatggtctgcacgtatctgtactgc 36130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 47071306 - 47071446
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||| ||||| ||| |||||||| |||||||||||||||||||||| |||| |||||| | ||||||||| || ||    
T  47071306 gccatgtctgctctcctgcctgctcacctcaatcagccgccttaagcatgtgagtgcggaagtcgacgaacgcctacacaatgtaaggcggtgggaggtc 47071405  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||||| ||||  |||||||||||||    
T  47071406 tacaacatccgtcggatgtctggggatggtctggacgtatc 47071446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 2272144 - 2272322
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||| |||||| | |||  |||  ||||||||||||||  |||||||||||||| |||| || |||||||||||||||||||||||    
T  2272144 caccctagtgtaccataggacatagccatccgccatccgccatgtctgctctcctgcctgctcaccccgatcgtccgccttaagcgtgtgagtgcggaag 2272243  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| |||||||||||   | ||||||| || ||  ||||||||||| ||||||| ||||  ||||| |||||||    
T  2272244 tcgacgaacgcctgcacaatggaaagcggtgggaggtctgcaacatcagtcggatgtctggggatggtctgcacgtatc 2272322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 6928058 - 6927918
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||   |||  ||||     
T  6928058 gccatgtctgctcttgcgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcgcaatctgagttagtgtcagctt 6927959  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||| |||| ||| |||||| ||||||  ||||||||||||    
T  6927958 tacagcatccgtcggatgtcgagggaccctctggacgtatc 6927918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 485 - 704
Target Start/End: Complemental strand, 6928389 - 6928167
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| |||||||||||||| |||||||||  |||||| | | |||||||||||||||||| ||| ||| |||||||||||||||||||| |   |||||    
T  6928389 tactcctggtcctgctgatggtgctggtgcatcctccttggcatctggcctcgcctcctggtcaagatcggcgcgatctgctccctaacacgagtcatgg 6928290  T
Q  585 cctcagtccattgctcatggctcatca---cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  ||| |||| | || |||| |   |||||||||| | |||| ||||| | |||||||| ||| | ||||||||| || | || |||||||| ||    
T  6928289 cctgaaaccactgctgagggatcatgacatcctcctgacctatctgcgcatcagcgtaggcaactacgacactaaccatgccataggtgtcaggcgaact 6928190  T
Q  682 tctcgcctcgtaccgctcccacc 704  Q
    |||| ||||||||||||||||||    
T  6928189 tctcacctcgtaccgctcccacc 6928167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 734 - 887
Target Start/End: Original strand, 30253215 - 30253368
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||| || |||  ||| ||||||||||| || ||| ||||||||||||||||||||||||||| |||| |||||||||||| |||| |||      
T  30253215 catacgccatgtttgttctcttgcatgctcaccccagtcagccgccttaagcgtgtgagtgcggaagtcgatgaaaacctgcacaatctcaggcagtgac 30253314  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    ||||| |||||||| | | ||||||||||||| || |||| |||||||| ||||    
T  30253315 agctctacaacatccgacggatgtctagggacggtttggatgtatctgtactgc 30253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 599794 - 599654
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    |||||| |||||||  ||||||||||||||||||| || |||||||||||||||||| ||||||||||||  |||||||||| | ||||  ||| |||||    
T  599794 gccatgactgctctcctgcctgctcaccccaatcgtccaccttaagcgtgtgagtgcagaagtcgacgaacacctgcacaatgtaaggcaatggcagctc 599695  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| || ||||||||  |||  |||||||||||||    
T  599694 tacaacatccgtgagatgtctgaggatggtctggacgtatc 599654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 50214286 - 50214426
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |  ||||||||||||||||| |  |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||  ||||     
T  50214286 gccatgtctgctctcttagctgctcaccccaatcggtcgtcttaagcgtgtgagtgaggaagtcgacgaacgcctacacaatgtgaggcggtgacagctt 50214385  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||| ||| ||| ||||||| ||||| |||||||||||||    
T  50214386 tacaatatccgtcggatgtctggggacggtctggacgtatc 50214426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 526 - 703
Target Start/End: Complemental strand, 600087 - 599910
Alignment:
Q  526 cctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaac 625  Q
    ||||| |||||||||||||| ||| ||| |||||||||||||||| | ||||| |||||||| |  ||| ||||   ||||||| ||||| ||  |||||    
T  600087 cctctagcctcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcctgaaaccactgctgggggctcatgacctcttgggccaac 599988  T
Q  626 tgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||  |||||   ||||||||| || | |||||||||||  | || |||||||||||||||||||||||||||||||||    
T  599987 tgtgcatcagtgtaggcaacagcggcactaaccatgtcgtaggtgtcaggcgagcttctcgcctcgtaccgctcccac 599910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 739 - 864
Target Start/End: Original strand, 4005537 - 4005661
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||| ||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||| | |||  |||| |||||    
T  4005537 gccatgtctgctctcctgcctactcaccccaatcg-ccgctttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaagggagtgggagctc 4005635  T
Q  839 aacaacatcagtcagatgtctaggga 864  Q
     |||||||| ||  ||||||||||||    
T  4005636 tacaacatccgtgggatgtctaggga 4005661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 739 - 820
Target Start/End: Original strand, 52388724 - 52388805
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaat 820  Q
    ||||||||| ||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  52388724 gccatgtctactctcctgcctgctcaccccaatcgtccgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaat 52388805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 702
Target Start/End: Original strand, 2648377 - 2648585
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  2648377 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctaag 2648476  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  2648477 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 2648576  T
Q  694 ccgctccca 702  Q
    |||||||||    
T  2648577 ccgctccca 2648585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 704
Target Start/End: Original strand, 4005215 - 4005422
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| |||||||||| ||||| ||| ||| ||| || ||||||||||||| | ||||  |||||||| |  ||| |||| |     
T  4005215 tgctgatggtgcctcctcctcggcctctggccttgcctcttggtcaagatcggcacgatctgctccctcatatgggtcatggcctgaaaccactgctgag 4005314  T
Q  603 gg------ctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccg 696  Q
    ||      ||||| ||||| ||  |||||||  ||||| | ||||||||||||||||||||||||||  | |  ||||||||||||||||||||||||||    
T  4005315 gggtcatgctcatgacctcatgggccaactgtgcatcagcgtaggcaacaacgccgctaaccatgtcgtaggcgtcaggcgagcttctcgcctcgtaccg 4005414  T
Q  697 ctcccacc 704  Q
    ||||||||    
T  4005415 ctcccacc 4005422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 491 - 587
Target Start/End: Original strand, 16861565 - 16861661
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||  ||| |||||||| |||||||| |||| ||||| ||||||||    
T  16861565 tggtcctactgatgctgctggtgcctcctcctcggcctctggcctcgcctcctgttcaagatcagcgcaatctgctctctaagatggctcatggcct 16861661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 50477584 - 50477787
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| |||||||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  50477584 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcagcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 50477683  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  50477684 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 50477783  T
Q  700 ccac 703  Q
    ||||    
T  50477784 ccac 50477787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 54389371 - 54389168
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  54389371 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 54389272  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| ||||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  54389271 tgctcatgacctcctcctggcctaactgcgcatcagcataggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 54389172  T
Q  700 ccac 703  Q
    ||||    
T  54389171 ccac 54389168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 660
Target Start/End: Complemental strand, 12672655 - 12672529
Alignment:
Q  534 ctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatc 633  Q
    |||||||||||| || |||  | || |||||||||||||||||| ||| |||| ||  | |||||||| ||||||| |||||||||||||| ||||||||    
T  12672655 ctcgcctcctggtcattattggtgctatctgctccctaacatggtgcaaggccgcatacaattgctcagggctcattacctcctgacccaagtgctcatc 12672556  T
Q  634 aacataggcaacaacgccgctaaccat 660  Q
    |||||||| ||||||||  ||||||||    
T  12672555 aacataggaaacaacgctactaaccat 12672529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 16646414 - 16646294
Alignment:
Q  759 tgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtc 858  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||| || || |||||||   |||||||||    
T  16646414 tgctcaccccaatcgtctgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcataatgtaaggcggtggcaggtctacaacatacttcagatgtc 16646315  T
Q  859 tagggactgtctggacgtatc 879  Q
    | ||||  ||||||| |||||    
T  16646314 ttgggatggtctggatgtatc 16646294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 505 - 703
Target Start/End: Original strand, 30252898 - 30253104
Alignment:
Q  505 ctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg 604  Q
    ||||||||||| |||||||| ||||||||||||||||| ||  |  ||| |||||||||||| ||||||||   ||| |||| ||  | | |||| | ||    
T  30252898 ctgctggtgcctcctcctcggcctctggcctcgcctccaggtaatgatcggcgcgatctgctgcctaacatcatgcaaggccccatacaactgctgaggg 30252997  T
Q  605 ------ctcatcacctcctgacccaactg--ctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccg 696  Q
          ||||||||||||||||||||     ||||| | ||| ||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  30252998 gtcatgctcatcacctcctgacccaaaaaaactcattagcatgggcaacagcgccgctaaccatgtcataggtatcaggcgagcttctagcctcgtaccg 30253097  T
Q  697 ctcccac 703  Q
    |||||||    
T  30253098 ctcccac 30253104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 491 - 587
Target Start/End: Complemental strand, 41615513 - 41615417
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||| |||||||| ||| ||| |||| ||||||||||||| ||||| ||||||||    
T  41615513 tggtcctgctgatgttgttggtgcctcctcctcggcctctggcctcacctcctggtcaagatcggcgcaatctgctccctaagatggctcatggcct 41615417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 34048671 - 34048468
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  34048671 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 34048572  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  34048571 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 34048472  T
Q  700 ccac 703  Q
    ||||    
T  34048471 ccac 34048468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 42900967 - 42901170
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  42900967 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 42901066  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  42901067 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 42901166  T
Q  700 ccac 703  Q
    ||||    
T  42901167 ccac 42901170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 531 - 703
Target Start/End: Original strand, 17562171 - 17562353
Alignment:
Q  531 ggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg-------ctcatcacctcct---gac 620  Q
    ||||||||||||||| ||| ||  |||||||||||||||||| ||||| |||||||| |  |||||||| | ||       ||||| |||||||   | |    
T  17562171 ggcctcgcctcctggtcaagataggcgcgatctgctccctaagatggctcatggcctgaaaccattgctgagggggtcatgctcatgacctcctcctggc 17562270  T
Q  621 ccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    | |||||| ||||| | |||||||||||||| |||||||||||| | || ||| |||||||||||||||| ||||||||||||    
T  17562271 ctaactgcgcatcagcgtaggcaacaacgccactaaccatgtcataggtgtcaagcgagcttctcgcctcataccgctcccac 17562353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 587
Target Start/End: Complemental strand, 16646747 - 16646663
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| || ||||||||||||| | ||||| ||||||||    
T  16646747 tgctgatggtgcctcctcctcgacctctggcctcgcctcctggtcaaaatcggcacgatctgctccctcatatggctcatggcct 16646663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 485 - 587
Target Start/End: Complemental strand, 48566084 - 48565982
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| ||||| || ||||| || ||||||| |||||||| ||||||||||  |||||||| ||| ||| |||||||||||||||||||||||  |||||    
T  48566084 tactcctggtcttgttgatgttgttggtgcctcctcctcggcctctggcctaccctcctggtcaagatcggcgcgatctgctccctaacatgggtcatgg 48565985  T
Q  585 cct 587  Q
    |||    
T  48565984 cct 48565982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 2271857 - 2272066
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| |||||||||| | ||| ||  ||| |||||||| ||| | ||||| ||||||||||  ||| |||| |     
T  2271857 tgctgatggtgcctcctcctcggcctctgggctcgcctcctagtcaaaattggcgtgatctgcttcctcatatggctcatggcctcaaaccactgctgag 2271956  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| ||||||||||| |||| |||| ||||||| | || | |||||||||||||||||| ||    
T  2271957 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcataggcaacagcgccactaatcatgtcataggtgttaggcgagcttctcgcctcata 2272056  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  2272057 ccgctcccac 2272066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 510 - 703
Target Start/End: Original strand, 49266177 - 49266379
Alignment:
Q  510 ggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg----- 604  Q
    |||||| |||||||| |||||||||||||||||||| ||| |   |||| ||||||||||||| |||||  ||||||| |  ||| |||| | ||         
T  49266177 ggtgcctcctcctcggcctctggcctcgcctcctggtcaagacaggcgcaatctgctccctaagatggctgatggcctgaaaccactgctaaggggtcat 49266276  T
Q  605 -ctcatcacctcctga---cccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcc 700  Q
     ||||| ||||||| |   || |||||| ||||| | ||||||||| |||| |||||||||||| |||| |||| ||||||||||||||  |||||||||    
T  49266277 gctcatgacctcctcatggcctaactgcgcatcagcgtaggcaacatcgccactaaccatgtcataagtgtcagacgagcttctcgcctaataccgctcc 49266376  T
Q  701 cac 703  Q
    |||    
T  49266377 cac 49266379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 47070987 - 47071071
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| |||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||| | ||||| ||||||||    
T  47070987 tgctgatggtgcctcctcctcggcctctggcatcgcctcctggtcaaaatcggcgcgatctgctccctcatatggctcatggcct 47071071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 42804753 - 42804971
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||  |  ||  ||||||||| || ||||||||   ||| |||| ||     
T  42804753 tggtcctactgatgctgttggtgcctcctcctcggcctctggcctcgcctcctggtaatgattggcgcgatctactgcctaacataatgcaaggccacat 42804852  T
Q  591 tccattgctcatg------gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     | |||||| | |      ||||||| |||||||||||||   ||||||  ||| ||||| | ||||  ||||||| ||| | |||||| ||||||||||    
T  42804853 acaattgctgaggggtcatgctcatcccctcctgacccaaaaactcatcggcatgggcaatagcgccagtaaccatatcataggtatcatgcgagcttct 42804952  T
Q  685 cgcctcgtaccgctcccac 703  Q
     ||||||||||||||||||    
T  42804953 tgcctcgtaccgctcccac 42804971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 46698122 - 46698325
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  46698122 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 46698221  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | || |||| | |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  46698222 tgctcatgacctcctcctggcctaactgcgcatcagcgtatgcaatagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 46698321  T
Q  700 ccac 703  Q
    ||||    
T  46698322 ccac 46698325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 50213974 - 50214177
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatg----- 603  Q
    ||||||| |||||||| |||||||||||||||||| | ||| ||| ||||||||||||| || | ||||| |||||||| |  |||  ||| |||         
T  50213974 tggtgcctcctcctcggcctctggcctcgcctcctagtcaaaatcggcgcgatctgctctcttatatggctcatggcctgaaaccacagctgatgggtaa 50214073  T
Q  604 -gctcatcac---ctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
     ||| || ||   |||||| || |||||| ||||||| |||||||||||||| | | |||||||| | || | ||||| |||||||||||| ||||||||    
T  50214074 tgcttatgaccttctcctggcctaactgcgcatcaacgtaggcaacaacgccacaatccatgtcataggtgttaggcgggcttctcgcctcataccgctc 50214173  T
Q  700 ccac 703  Q
    ||||    
T  50214174 ccac 50214177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 703
Target Start/End: Original strand, 52388550 - 52388608
Alignment:
Q  645 caacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||  | || |||||||||||||||||||||||||||||||||    
T  52388550 caacgccgctaaccatgtcgtaggtgtcaggcgagcttctcgcctcgtaccgctcccac 52388608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 49195081 - 49195134
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaag 301  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  49195081 ggcagaacctgttgcatgtgtttttacacattgtttcaatgctaaatcataaag 49195134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 26334765 - 26334841
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctg 564  Q
    |||||||| || ||||||| ||  ||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  26334765 tcttggtcatgttgatgcttcttttgccgcctcctcggcctctggcctcgtctcctggtcaatatcggcgcgatctg 26334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 42901302 - 42901426
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  42901302 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 42901401  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  42901402 tgtctggggatggtctgcacgtatc 42901426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 46401632 - 46401492
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  ||||||||||||||   || || |||||||||||||||||| ||||||||||||   |||||||||   ||||||||| || ||    
T  46401632 gccatgtctcctctcctgcctgctcaccccggacgtccgccttaagcgtgtgagtgccgaagtcgacgaacatctgcacaatggaaggcggtgggaggtc 46401533  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
       |||||||||| ||||||| ||||  ||||| |||||||    
T  46401532 cctaacatcagtcggatgtctggggatggtctgcacgtatc 46401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 623 - 703
Target Start/End: Complemental strand, 46401828 - 46401748
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  46401828 aactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 46401748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 52388414 - 52388498
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| ||||||| |||||||| |||||||||||||||||||| ||| ||  |||||||||||||||| | ||||  ||||||||    
T  52388414 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaagattggcgcgatctgctccctcatatgggtcatggcct 52388498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 699
Target Start/End: Complemental strand, 9473528 - 9473326
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| |||||| ||||||||||| | ||| ||| |||||||||||||||| | ||||  |||||||| |  | | |||| |     
T  9473528 tgctgatggtgcctcctcctcggcctctgacctcgcctcctagtcaagatcggcgcgatctgctccctcatatgggtcatggcctgaaactactgctaag 9473429  T
Q  603 g------gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccg 696  Q
    |      |||||| || ||||  ||||||||  ||||| | ||||||||| | ||||||||||| ||  | || |||||||||||||||||||| |||||    
T  9473428 gggtcatgctcatgacatcctagcccaactgtgcatcagcgtaggcaacagcaccgctaaccatatcgtaggtgtcaggcgagcttctcgcctcataccg 9473329  T
Q  697 ctc 699  Q
    |||    
T  9473328 ctc 9473326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 48892259 - 48892181
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgccct-tcggcagttaattgtcgagg 214  Q
    ||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||| | ||| ||||||| ||||||||    
T  48892259 aattgttgttgacacatcttgttaggctaagaaacacgagt-aaatacgtaaatgccttctcgacagttaactgtcgagg 48892181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 46698457 - 46698581
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || ||  ||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  46698457 tgcctgctcaccccgagcgtccgtcttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 46698556  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  46698557 tgtctggggatggtctgcacgtatc 46698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 589
Target Start/End: Original strand, 49141337 - 49141417
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctca 589  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||    
T  49141337 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctca 49141417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 50477919 - 50478043
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || ||||||||||||||||||||||||| |||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  50477919 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcaacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 50478018  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  50478019 tgtctggggatggtctgcacgtatc 50478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 6928862 - 6928815
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  6928862 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaatac 6928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 693
Target Start/End: Complemental strand, 18751883 - 18751794
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    ||||||||||||||||||||| | ||||| | ||| || |||| ||||  |||||||| || | |||||||| ||| |||||||||||||    
T  18751883 gctcatcacctcctgacccaaatactcattagcatgggaaacatcgccagtaaccatgacataggtatcaggtgagtttctcgcctcgta 18751794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 804
Target Start/End: Complemental strand, 54389036 - 54388987
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcga 804  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||    
T  54389036 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcga 54388987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 655 - 703
Target Start/End: Complemental strand, 16646586 - 16646538
Alignment:
Q  655 aaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||| | || |||||||||||||||||||| ||||||||||||    
T  16646586 aaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 16646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 49141660 - 49141784
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||| |||| |||   |||||||||   |||||| || || ||   |||||||||| ||    
T  49141660 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaaatcgatgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 49141759  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  49141760 tgtctggggatggtctgcacgtatc 49141784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 11380378 - 11380457
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatg-cccttcggcagttaattgtcgagg 214  Q
    ||||||| ||||||||| | |||||||| |||||||| ||||||||||||   || ||||||||||||||| || |||||    
T  11380378 aattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgagg 11380457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 18752387 - 18752340
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||| | ||||||||| |||||||||    
T  18752387 aattgttgttgacacatcttgttaggttgagaaacacatgtaaaatac 18752340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 36130722 - 36130655
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccct 570  Q
    ||||| ||||||| |||||||| |||||||||| || || ||| ||| ||| ||||||||||||||||    
T  36130722 tgctgatggtgcctcctcctcggcctctggccttgcatcttggtcaagatcggcgcgatctgctccct 36130655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 703
Target Start/End: Complemental strand, 41615359 - 41615304
Alignment:
Q  648 cgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  41615359 cgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgcttccac 41615304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 273 - 703
Target Start/End: Complemental strand, 11197335 - 11196905
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  11197335 acacattgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaatgaacaattgtcataaata 11197236  T
Q  373 tatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaac 472  Q
    ||| || || |||||||||||||| |||||||||||||||| ||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||    
T  11197235 tatatcgtcgaaacaaagtaacaacaaatgtcatgaaaatacaacgaaatgaccaaatgtcataaaaatatataccaagtcatgaaaatatatcctaaac 11197136  T
Q  473 ataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaa 572  Q
    || ||||||   ||||| |||||||||||||| || ||||||| |||| ||| |||||||||||||||||| | ||| ||| ||||||||||||||  ||    
T  11197135 attaaatac---tactcctggtcctgctgatgttgttggtgcctcctcttcggcctctggcctcgcctcctagtcaagatcggcgcgatctgctcctcaa 11197039  T
Q  573 catggcgcatggcctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagt 669  Q
    |||||  |||||||| |  ||| || | | |||||||   | |||||||||| |||||| ||| | | ||||||||| || | ||||| |||||| | ||    
T  11197038 catggatcatggcctgaaaccactgttgagggctcatgacctcctcctgacctaactgcacattagcgtaggcaacagcggcactaactatgtcataggt 11196939  T
Q  670 atcaggcgagcttctcgcctcgtaccgctcccac 703  Q
     ||||||||||||||||||| |||||||||||||    
T  11196938 gtcaggcgagcttctcgccttgtaccgctcccac 11196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 273 - 703
Target Start/End: Original strand, 38119745 - 38120173
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||      ||||||||||||||||||||||||||||||||| |||    
T  38119745 acacattgtttcaatgccaaatcataaagtcaaccaaagaaaattaccaacataatt------gaaaatatgatacggaaacgaacaattgtcataaata 38119838  T
Q  373 tatgtcatcaaaacaaagtaacaataaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcct-aaa 471  Q
    |||||| || |||||||||||||| ||||||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  38119839 tatgtcgtcgaaacaaagtaacaacaaatgtcgtgaaaatacaacgaaacggccaaatgtcctgaaaatatacaccaagtcatgaaaatatatcctaaaa 38119938  T
Q  472 cataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctcccta 571  Q
    ||||||||| || ||||| || |||| |||||||||| |||||| |||||||| ||| |||||| ||||||||| ||| ||| || ||||||| ||||||    
T  38119939 cataaaatattactactcctgatcctactgatgctgccggtgcctcctcctcggcctttggcctagcctcctggtcaagatcggcacgatctggtcccta 38120038  T
Q  572 acatggcgcatggcctcagtccattgctcatggctcatcacctcc---tgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaag 668  Q
    ||||||  ||| | || |  ||| |||| | ||||||| ||||||   ||||| | |||| |||||   |||||||||||| | |||||||||||| | |    
T  38120039 acatgggtcatcgtctgaaaccactgctgagggctcatgacctcctcttgacctatctgcgcatcagtgtaggcaacaacgacactaaccatgtcatagg 38120138  T
Q  669 tatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    | ||||||||||||||||||||||||| |||||||    
T  38120139 tgtcaggcgagcttctcgcctcgtaccactcccac 38120173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 226 - 483
Target Start/End: Original strand, 23272944 - 23273216
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacac-----------attgtttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||           |||||||||||| |||||||||||||||||||||||||    
T  23272944 ataaaatggaaaaacctcatgaggcagaacctgttacatgtgtttttacacattgtaaacacattgtttcaatgccaaatcataaagtcaatcaaagaaa 23273043  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaa------aacaaagtaacaataaatgtcatga 408  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||| |      |||||||||||   |||||||||||    
T  23273044 attaccaacataattgaaattgaaaatatgatatggaaacgaacaattgtcataaaaatatgtcatcgaaataccaacaaagtaac---aaatgtcatga 23273140  T
Q  409 aaataaaac-gaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatacta 483  Q
    || || ||| |||    | || |||| ||||||||||||||||||| | ||||| |||||| ||||||||||||||    
T  23273141 aagtacaacagaacgaacaaaatgtcttgaaaatatacaccaagtcctaaaaatctatcctcaacataaaatacta 23273216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 16269312 - 16269471
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacat 325  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||| ||  ||||||||||||||    
T  16269312 ataaaatggcagaacctgttgaggcagaacctgttaaatgtgtttttacacattttttcaatgccaaatcataaagttaataaacaaaaattaccaacat 16269411  T
Q  326 aattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaa 385  Q
    |||||||||||||||||||||||  |||||||||| | ||||| | ||||||||||||||    
T  16269412 aattgaaattgaaaatatgatacaaaaacgaacaaatatcatagaaatatgtcatcaaaa 16269471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 702 - 879
Target Start/End: Original strand, 38120252 - 38120429
Alignment:
Q  702 accttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagt 801  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||  ||| ||||||||||||| ||||||    
T  38120252 accttagtgtaccataacacatagccctccctcatacgccatgtctgctctgctacctgctcaccccaatcggcggcctgaagcgtgtgagtgtggaagt 38120351  T
Q  802 cgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||||| |||||||||||||||||| |||  ||||| |||||||| ||||||||| ||||||  |||||||||||||    
T  38120352 cgacgaatgcctgcacaatctgaggcagtgtcagctctacaacatccgtcagatgtttagggatcgtctggacgtatc 38120429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 494 - 703
Target Start/End: Complemental strand, 51337159 - 51336947
Alignment:
Q  494 tcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtcc 593  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |  ||    
T  51337159 tcctgctgatgctgctggtgcctcctcctcagcctctggcctcgcctcctggccaatatcggcgcgatctgctctctaacatggctcatggcctgaaacc 51337060  T
Q  594 attgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctc 690  Q
    |||| | | |||||||   | ||||||| || | ||   ||||| | ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  51337059 attgatgagggctcatgacctcctcctggccaatctatgcatcagcgtaggcaacagcgccgctaaccatgtcataggtatcatgcgagcttctcgcctc 51336960  T
Q  691 gtaccgctcccac 703  Q
    |||||||||||||    
T  51336959 gtaccgctcccac 51336947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 701 - 887
Target Start/End: Complemental strand, 47505305 - 47505119
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||||||||||| | ||   |||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||    
T  47505305 caccctagtgtaccatagcacatagccatctgccatccgccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagcgcggaag 47505206  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
    |||||||| |||||||||||||||||||||| | |||| |||||||| ||| ||||||| ||||| |||||||||||| ||| ||||    
T  47505205 tcgacgaatgcctgcacaatctgaggcggtgatcgctctacaacatccgtcggatgtctggggacagtctggacgtatttgtactgc 47505119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 11196827 - 11196649
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||     
T  11196827 caccttagtgtaccataacacatagccctccctcatacgacatgtctgctctgctgcctgctcaccctaatcggccgccttaagcatgtgagtgcggaaa 11196728  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| | ||||||||||| ||||||||  ||||| |||||||  ||| ||||||||||||   ||||||||||||    
T  11196727 tcgacgaatgtctgcacaatctaaggcggtgtcagctctacaacattcgtcggatgtctagggatcatctggacgtatc 11196649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 22526929 - 22526789
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||    
T  22526929 gccatgtttgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagggcggaagtcgacgaacgcctgcacaatgtgaggcggtggcagctc 22526830  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||||| ||||| |||||||||||||    
T  22526829 tacaacatcggtcggatgtctggggacggtctggacgtatc 22526789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 47660837 - 47660659
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||||| |||  |||  ||||||||||||||  || | ||||||||||||||||| |||||||||||||||||| ||||    
T  47660837 caccttagtgtaccataacacatagtcatccgccatccgccatgtctgctctcgtgtcggctcaccccaatcggccaccttaagcgtgtgagtgcagaag 47660738  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| ||||||||||||||||| ||||  ||||| |||||||  ||| |||||||||||||  ||||||||||||    
T  47660737 tcgacgaatgcctgcacaatctgaggtggtgtcagctctacaacattcgtccgatgtctagggaccctctggacgtatc 47660659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 701 - 865
Target Start/End: Complemental strand, 45828540 - 45828377
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| | |||  |||  ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  45828540 caccttagtgtaccataacacatagccatcctccattcgccatgtctgctcttgtgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaag 45828441  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggac 865  Q
    |||||||| | |||||||||||||||| |||| ||||| |||||||| ||  |||||||||||||    
T  45828440 tcgacgaatg-ctgcacaatctgaggcagtggcagctctacaacatctgtaggatgtctagggac 45828377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 734 - 882
Target Start/End: Original strand, 49855142 - 49855290
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||| |||||      
T  49855142 catacgccatgtctgctctcctgcatgctcaccccaatcggccgccttaagtgtgtgagtgcgcaagtcgacgaaagtctgcacaatttgagccggtgac 49855241  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtatctgt 882  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  49855242 agctctacaacatccgacagatgtctagggacggtctggacgtatctgt 49855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 485 - 703
Target Start/End: Complemental strand, 45828839 - 45828618
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| |||||||||||||||||||||||||  ||||| | ||||| |||||||||||||| ||| ||| |||||||||||||||||||||||  |||||    
T  45828839 tactcctggtcctgctgatgctgctggtgccttctccttggcctctagcctcgcctcctggtcaagatcggcgcgatctgctccctaacatgggtcatgg 45828740  T
Q  585 cctcagtccattgctcatggctcatcacct---cctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  ||| || | | ||||||| ||||   | ||||| | |||| ||||| | ||||||||| || | |||||||||||| | || |||||||||||    
T  45828739 cctgaaaccactgttgagggctcatgacctcaccttgacctatctgcgcatcagcgtaggcaacatcggcactaaccatgtcataggtgtcaggcgagct 45828640  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||||||||||||||||    
T  45828639 tctcgcctcgtaccgctcccac 45828618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 52804832 - 52804654
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||||||||||| | ||| ||||   |||||||||||||  |||||||||||||||||| ||| ||||||| ||||||||| |||||    
T  52804832 caccctagtgtaccatagcacatagccatccgtcatcctccatgtctgctctcctgcctgctcaccccaatcagccgccttaagtgtgtgagtgtggaag 52804733  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| | ||||||||| |||||| |||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||    
T  52804732 tcgacgaacgtctgcacaatgtgaggcagtggcagctctacaacatccgtcggatgtctggggacggtctggacgtatc 52804654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 19522401 - 19522541
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||  ||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||| |||||    
T  19522401 gccatgtctgctctcctgcctgctcaccccaatcggctgccttaagcgtgtgagggcggaagttgacgaacgcctgcacaatgtgaggcggtggcagctc 19522500  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| |||  |||||| ||||| |||||||||||||    
T  19522501 tacaacatccgtcgaatgtctggggacggtctggacgtatc 19522541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 31780784 - 31780924
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| | ||||||||| || ||    
T  31780784 gccatgtctgctctcctgcctactcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaacgtctgcacaatgtaaggcggtgggaggtc 31780883  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||||||| ||||| | ||||  |||||||||||||    
T  31780884 tacaacatcagtcggatgtttggggatggtctggacgtatc 31780924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 503 - 699
Target Start/End: Original strand, 19522092 - 19522288
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| |||||||||||||||| ||| ||| ||| |||||||||||||||| | ||| | |||||||| |  ||| || | |     
T  19522092 tgctgatggtgcctcctcctcggcctctggcctcgcctcttggtcaaaatcggcgcgatctgctccctcatatgactcatggcctgaaaccactgttgag 19522191  T
Q  603 ggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |||||||  ||||||| |||| |||  ||||| |||||||||||||| | |||||||||||| | || |||||||||||||||||||| ||||||||    
T  19522192 ggctcatgtcctcctggcccatctgtgcatcagcataggcaacaacggcactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctc 19522288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 22527258 - 22527037
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||  |||||||||||||| ||| ||||| ||||||||||     
T  22527258 tggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctccttaagatggctcatggcctcaa 22527159  T
Q  591 tccattgctcatg------gctcatcacctc---ctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     | | |||| | |      |||||| |||||   ||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||    
T  22527158 acgactgctgaggggtcatgctcatgacctccttctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagct 22527059  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||| ||||||    
T  22527058 tctcgcctcataccgttcccac 22527037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 505 - 702
Target Start/End: Complemental strand, 47661116 - 47660916
Alignment:
Q  505 ctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg 604  Q
    ||||||||||| |||| ||||||  |||||||||||||||| ||| ||| |||||||||||||||||||||||  |||||||| |  ||  || | | ||    
T  47661116 ctgctggtgcctcctcatcgacccatggcctcgcctcctggtcaagatcggcgcgatctgctccctaacatgggtcatggcctgaaaccgctgttgaggg 47661017  T
Q  605 ctcatcacctcct---gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctccc 701  Q
    ||||| |||||||   |||| |  ||| ||||| |||||||||||||| | |||||||||||| | || |||||||||||||| ||||||||||||||||    
T  47661016 ctcatgacctcctcctgacctatatgcgcatcagcataggcaacaacgacactaaccatgtcataggtgtcaggcgagcttcttgcctcgtaccgctccc 47660917  T
Q  702 a 702  Q
    |    
T  47660916 a 47660916  T

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Target: chr1; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 739 - 873
Target Start/End: Original strand, 95219 - 95353
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  || |||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| || ||    
T  95219 gccatgtctactctcctgtctgctcaccccaatcatccgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaaggcggtgggaggtc 95318  T
Q  839 aacaacatcagtcagatgtctagggactgtctgga 873  Q
     |||||||||||| ||||||| ||||  |||||||    
T  95319 tacaacatcagtcggatgtctggggatggtctgga 95353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 743 - 838
Target Start/End: Complemental strand, 21143859 - 21143764
Alignment:
Q  743 tgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  21143859 tgtctgctcttctgcttgctcaccccaatcggccaccttaagtgtgtgagtgcggaagtcgacgaacgcctgcacaatgtgaggcggtggcagctc 21143764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 35256217 - 35256420
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||| | |||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||| || |||||| | |  |||||| | |     
T  35256217 tgctgttggtgtctcctcctcggcctctggcctcgcctccttgccaatatcggcgcgatctgctctctaacatagctcatggcttgaaaccattgttgag 35256316  T
Q  603 ggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |||||||   | ||||||| || |  ||  ||||||  ||||||||| ||| ||||||||||||| | |||||| ||||||||||||||| ||||| |||    
T  35256317 ggctcatgacctcctcctggccaatatgtgcatcaatgtaggcaacagcgctgctaaccatgtcataggtatcatgcgagcttctcgccttgtaccactc 35256416  T
Q  700 ccac 703  Q
    ||||    
T  35256417 ccac 35256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 47505604 - 47505383
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||| ||  ||| ||||||||| |||| ||||| |||||||| |     
T  47505604 tggtcctgctgatgctgttggtgcctcctcctcggcctctggcctcgcctcatggtcaagataggcgtgatctgctctctaatatggctcatggcctgaa 47505505  T
Q  591 tccattgctcatggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     ||| || | | || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||    
T  47505504 accactgttgaggggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagct 47505405  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||||||||||    
T  47505404 tctcgcctcataccgctcccac 47505383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 508 - 703
Target Start/End: Original strand, 23273217 - 23273415
Alignment:
Q  508 ctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctc 607  Q
    |||||||| |||||||| |||||||||||||||||||| ||| ||   ||||||||||||| ||||||||  |||||||| |  ||| || | | |||||    
T  23273217 ctggtgccacctcctcggcctctggcctcgcctcctggtcaagattgacgcgatctgctccataacatgggtcatggcctgaaaccactgttgagggctc 23273316  T
Q  608 at---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||   | ||||||| || |||||| ||||| | ||||| |||||| | |||||||||||| | || || ||||||||||||||||| ||||||||||||    
T  23273317 atgacctcctcctggcctaactgcgcatcagcgtaggctacaacggcactaaccatgtcataggtgtctggcgagcttctcgcctcataccgctcccac 23273415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 49854932 - 49855031
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||||   ||||||| ||| ||||||| |||| |||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  49854932 gctcatcacctcctgacccaaaaactcatcagcatgggcaacatcgccactaaccatgtcataggtatcaggggagcttctcgcctcgtaccgctcccac 49855031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 21144175 - 21143972
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatg----- 603  Q
    ||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||| | ||||| |||||||| |  ||| | || | |         
T  21144175 tggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcagcgcgatctgctccctcatatggctcatggcctgaaaccactactgaggggtcg 21144076  T
Q  604 -gctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
     ||||||   | ||||||| || |||||| ||||| | |||||||||||||| | |||||||||| | || |||||| ||||||||||||| ||||||||    
T  21144075 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacaacgccacaaaccatgtcataggtgtcaggcaagcttctcgcctcataccgctc 21143976  T
Q  700 ccac 703  Q
    ||||    
T  21143975 ccac 21143972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 13636805 - 13637014
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| ||| |||||||||||| | ||||  ||||||||||  ||| |||| |     
T  13636805 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgtgatctgctccctcatatgggtcatggcctcaaaccactgctgag 13636904  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  13636905 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 13637004  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  13637005 ccgctcccac 13637014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 31780472 - 31780675
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||| | |||||||||||| ||| ||| |||||||||| ||||| | ||||| |||||||| |  ||| |||  |     
T  31780472 tgctgatggtgcctcctcctcggcctctaggctcgcctcctggtcaaaatcggcgcgatctgttccctcatatggctcatggcctaaaaccactgccgag 31780571  T
Q  603 ggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    || ||||   | ||||||| || |||||| ||||| | ||||||||||| ||   |||||||||| | || |||||||||||||||||||| ||||||||    
T  31780572 gggtcatgctctcctcctggcctaactgcacatcagcgtaggcaacaacaccataaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctc 31780671  T
Q  700 ccac 703  Q
    ||||    
T  31780672 ccac 31780675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 26878955 - 26878752
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  26878955 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 26878856  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  26878855 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 26878756  T
Q  700 ccac 703  Q
    ||||    
T  26878755 ccac 26878752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 19159272 - 19159063
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||| | ||||||| |||||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  19159272 tgctgatggtgcctcctcctgggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 19159173  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||  || |||||| ||||| | ||||||||| | || |||||||||||| | || |||||||||||||||||||| ||    
T  19159172 gggtcatgctcatgacctcctcctagcctaactgcgcatcagcgtaggcaacagcaccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 19159073  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  19159072 ccgctcccac 19159063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 755 - 887
Target Start/End: Original strand, 13637146 - 13637278
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || |||||   |||||||||| ||    
T  13637146 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggagctccctaacatcagtcgga 13637245  T
Q  855 tgtctagggactgtctggacgtatctgtgctgc 887  Q
    ||||| ||||  ||||| |||||||||| ||||    
T  13637246 tgtctggggatggtctgcacgtatctgtactgc 13637278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 710 - 802
Target Start/End: Original strand, 16269892 - 16269984
Alignment:
Q  710 gtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtc 802  Q
    |||||||| |||||||   ||||||||  ||||||||||||||  |||| |||||||||||| || |||||||||||||||||||||||||||    
T  16269892 gtaccataacacatagcgatccctcatccgccatgtctgctctcctgccggctcaccccaattgggctccttaagcgtgtgagtgcggaagtc 16269984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 739 - 847
Target Start/End: Complemental strand, 19158947 - 19158839
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||| ||||  |||||||| ||||| |||| || |||||| |||||||||||||||||||||||| ||||||||||| | |||  |||| |||||    
T  19158947 gccatgtctcctctcctgcctgctgaccccgatcgtccgccttaatcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaagggagtgggagctc 19158848  T
Q  839 aacaacatc 847  Q
     ||||||||    
T  19158847 tacaacatc 19158839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 3729154 - 3729357
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||  |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  3729154 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaattggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 3729253  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  3729254 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 3729353  T
Q  700 ccac 703  Q
    ||||    
T  3729354 ccac 3729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 16269706 - 16269805
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||| |||| || |||||| ||| ||||||||||    | ||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  16269706 gctcatcacctcctgaaccaaatgatcatcagcatgggcaacaacgttagttaccatgtcataggtatcaggcgagcttctcgcctcttaccgctcccac 16269805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 587
Target Start/End: Original strand, 94904 - 94997
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    |||||||||||||||||   ||||| |||||||| ||||| |||||||||||||| ||| ||  |||||||||||||||||| ||||| ||||||||    
T  94904 tggtcctgctgatgctg---gtgcctcctcctcggcctctagcctcgcctcctggtcaagataggcgcgatctgctccctaagatggctcatggcct 94997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 35255761 - 35255839
Alignment:
Q  137 attgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatg-cccttcggcagttaattgtcgagg 214  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||| | ||||||||| ||||||||    
T  35255761 attgttgttgacacatcttgttaggctcagaaacacgagtaaaatacgtaaatgcccccttggcagttaactgtcgagg 35255839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 5750290 - 5750351
Alignment:
Q  144 ttgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||    
T  5750290 ttgacacatcttgttaggcttagaaacataagtaaaagacgtaaatgcccctcggtagttaa 5750351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 52805119 - 52804910
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| |||||||||||||||||||| ||| ||  ||||| |||||||||| | ||||| | |||||| |  ||| | || |     
T  52805119 tgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaattggcgcggtctgctccctcatatggctcgtggcctgaaaccactactgag 52805020  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| | |||||||||| | || |||||||||||||||||||| ||    
T  52805019 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccacaaaccatgtcataggtgtcaggcgagcttctcgcctcata 52804920  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  52804919 ccgctcccac 52804910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 485 - 601
Target Start/End: Original strand, 17513294 - 17513410
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| |||||||||| ||||| ||| ||  ||||| ||| |||| || |||||||||||| | ||||| | || |||||||||||||||||||||||||    
T  17513294 tactcatggtcctgctcatgctcctgttgttgcctcatcggcctccggactcgcctcctggtccatatcggtgctatctgctccctaacatggcgcatgg 17513393  T
Q  585 cctcagtccattgctca 601  Q
     | ||| ||||||||||    
T  17513394 tcgcagaccattgctca 17513410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 612 - 703
Target Start/End: Original strand, 50617816 - 50617907
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||| |||||| || || | ||||||||| |||| | |||||||||| | || |||||||||||||||||||| ||||||||||||    
T  50617816 cctcctgacctaactgcgcagcagcgtaggcaacagcgccacaaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 50617907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 16269587 - 16269667
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctcccta 571  Q
    |||||||  |||||||| || |||||||| |||||||||||||||||| |||||| ||| ||| || ||||||||||||||    
T  16269587 tggtcctattgatgctgttgttgccgcctgctcgacctctggcctcgcgtcctggtcaagatcggcacgatctgctcccta 16269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 5751015 - 5750962
Alignment:
Q  152 tcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||| ||||||    
T  5751015 tcttgttaggcttagaaacacaagtaaaagacgtaaatgtccctcggtagttaa 5750962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 703
Target Start/End: Original strand, 95055 - 95110
Alignment:
Q  648 cgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||| |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  95055 cgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 95110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 47661595 - 47661525
Alignment:
Q  144 ttgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    |||||||||||||||||||| |||||||| ||||||||||  ||||  || |||| |||||| ||||||||    
T  47661595 ttgacacatcttgttaggctgagaaacacgagtaaaataccaaaatatccctcggtagttaactgtcgagg 47661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 587
Target Start/End: Original strand, 50617711 - 50617781
Alignment:
Q  517 cctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    |||||||| ||||| |||||||||||||| ||| ||| | |||||||||||||| | ||||| ||||||||    
T  50617711 cctcctcggcctctagcctcgcctcctggtcaaaatcggtgcgatctgctccctcatatggctcatggcct 50617781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 562
Target Start/End: Complemental strand, 470651 - 470574
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatc 562  Q
    |||| ||||||||| |  ||||| || |||| |||||||| |||||||||||||||||||| ||| ||| ||||||||    
T  470651 tactattggtcctggtcctgctgatgctgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgcgatc 470574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 11197371 - 11197338
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgt 281  Q
    ||||||||||||||||||||||||||||||||||    
T  11197371 ggcagaacctgttacatgtgtttttacacattgt 11197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 778 - 879
Target Start/End: Complemental strand, 26878604 - 26878503
Alignment:
Q  778 ccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgta 877  Q
    |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||||||| ||||  ||||| |||||    
T  26878604 ccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcggatgtctggggatggtctgcacgta 26878505  T
Q  878 tc 879  Q
    ||    
T  26878504 tc 26878503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 575
Target Start/End: Original strand, 49854813 - 49854897
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacat 575  Q
    |||||||| ||||| || ||||||| |||||||| |||||||||||||||| |||  |  ||| || ||||||||| ||||||||    
T  49854813 tggtcctgttgatgttgttggtgcctcctcctcggcctctggcctcgcctcttggtaatgatcggcacgatctgctgcctaacat 49854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 772
Target Start/End: Original strand, 50617994 - 50618056
Alignment:
Q  710 gtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatc 772  Q
    |||||||||||||||||| ||   |||  ||||||||||||||  ||||||||||||||||||    
T  50617994 gtaccatagcacatagtcatctgccatccgccatgtctgctctcctgcctgctcaccccaatc 50618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 808
Target Start/End: Original strand, 3729489 - 3729542
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaa 808  Q
    ||||| |||||||| | || || ||||||||||||||||||||||||| |||||    
T  3729489 tgcctactcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcaacgaa 3729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 589
Target Start/End: Complemental strand, 8548336 - 8548255
Alignment:
Q  508 ctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctca 589  Q
    |||||||| |||||||| ||| ||| ||| |||||||| ||| |||  ||||||||||||||| | ||||  ||||||||||    
T  8548336 ctggtgcctcctcctcggcctttgggctctcctcctggtcaaaatcgacgcgatctgctccctcatatgggtcatggcctca 8548255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 51337641 - 51337592
Alignment:
Q  144 ttgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgccc 193  Q
    |||||||||| |||||| || |||||||| || |||||||||||||||||    
T  51337641 ttgacacatcatgttagactgagaaacacgagcaaaatacgtaaatgccc 51337592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 226 - 617
Target Start/End: Original strand, 5300838 - 5301244
Alignment:
Q  226 ataaaatggcagaacctcttgaggcagaacctgttacatgtgtttttacacattgt-----------ttcaatgtcaaatcataaagtcaatcaaagaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||           ||||||| |||||||||||||||||||||||||    
T  5300838 ataaaatggcagaacctcttgaggcagaacctgttacatgtatttttacacattgtaaacacattgtttcaatgccaaatcataaagtcaatcaaagaaa 5300937  T
Q  315 attaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtcatcaaaa------caaagtaacaataaatgtcatga 408  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||  |||      |||||||||||   |||||||||    
T  5300938 attactaacataattgaaattgaaaatatgatacagaaacgaacaattgtcataaaaatatgtcattgaaataccaacaaagtaacaa---atgtcatga 5301034  T
Q  409 aaataaaacgaaatggccaag-tgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctg 507  Q
    ||||| |||| || |  |||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  5301035 aaatacaacggaacgaacaaaatgtcatgaaaatatacaccaagtcctaaaaatatatcctaaacataaaatactactggtcttggtcctgctgatgctg 5301134  T
Q  508 ctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctc 607  Q
    |||||||| |||||||| |||||||||||||||||| | ||| ||| ||||||||| |||||||||||||  |||||||| |  ||| |||| | |||||    
T  5301135 ctggtgcctcctcctcggcctctggcctcgcctcctagtcaagatcggcgcgatctactccctaacatggatcatggcctgaaaccactgctgagggctc 5301234  T
Q  608 atcacctcct 617  Q
    || |||||||    
T  5301235 atgacctcct 5301244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 430 - 703
Target Start/End: Complemental strand, 45133054 - 45132782
Alignment:
Q  430 tgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctc 529  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||    
T  45133054 tgtcatgaaaatatacac-aagtcctaaaaatatatcctaaacataaaatactactactcatggtcttgttgatgctgctggtgccgcctcctcggcctc 45132956  T
Q  530 tggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgct 629  Q
    ||||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  45132955 tggcctctcctcctggccaatatcggcgtgatctgctctcttacatggcgcatggcctcagtccattgctcagggctcatcacctgctgacccaactgct 45132856  T
Q  630 catcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||| ||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||    
T  45132855 catcagcataggcaataacgccgctaaccatgtcataggcatcaggcgagcttctcgcctcgtaccgcttccac 45132782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 45132704 - 45132526
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  45132704 caccttagtgtaccataacacatagccctccctcatacgccatgtctgatctgctacctgctcaccccaatcggcctccttaagcatgtgagtgcggaag 45132605  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||  ||||||||||||    
T  45132604 tcgacgaaagcttgcacaatctgaggcggtggcagctcaacaacatccgtcggatgtctagggaccatctggacgtatc 45132526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 273 - 413
Target Start/End: Complemental strand, 45133182 - 45133042
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | |    
T  45133182 acacattgtttcaatgccaaatcataaagttaatcaaagaaaattaccaacaaaattgaaattgaaaatatgatacggaaacgaacaattttcataaaaa 45133083  T
Q  373 tatgtcatcaaaacaaagtaacaataaatgtcatgaaaata 413  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  45133082 tatgtcatcgaaacaaagtaacaacaaatgtcatgaaaata 45133042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 485 - 703
Target Start/End: Original strand, 34819403 - 34819624
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||   ||||    
T  34819403 tactcctggtcctgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggtcaagatcggcgcgatctgctccctaacatgggttatgg 34819502  T
Q  585 cctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  ||| |||| | |||||||   | |||||||||| | ||||  |||| | |||||||||||| | |||||||||||| | || |||||||||||    
T  34819503 cctgaaaccactgctgagggctcatgacctcctcctgacctatctgcgtatcagcgtaggcaacaacggcactaaccatgtcataggtgtcaggcgagct 34819602  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||||||||||||||||    
T  34819603 tctcgcctcgtaccgctcccac 34819624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 710 - 879
Target Start/End: Original strand, 21176414 - 21176583
Alignment:
Q  710 gtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaa 809  Q
    |||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||| |||     
T  21176414 gtaccatagcacatagtcatccctcatacgccatgtctgctctcctgcctgctcaccccaatcgtgctccttaagcgtgtgagtgcggaagtcgatgaat 21176513  T
Q  810 gcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||| |||||||||||||| | | ||||| |||||||| ||| ||||||||||||   ||||||||||||    
T  21176514 gcctccacaatctgaggcgatcgcagctctacaacatccgtcggatgtctagggatgctctggacgtatc 21176583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 711 - 879
Target Start/End: Complemental strand, 5679816 - 5679648
Alignment:
Q  711 taccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaag 810  Q
    ||||||||||||||| | ||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |    
T  5679816 taccatagcacatagccatccctcatacgccatgtctgctctcctgcctgctcaccccaatcgggctccttaagcgtgtgagtgcggaagtcgatgaatg 5679717  T
Q  811 cctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||||||||||||||||||| |  |||| |||||||| || || |||||||||||  ||||||||||||    
T  5679716 gctgcacaatctgaggcggtcgccgctctacaacatccgttagttgtctagggacgctctggacgtatc 5679648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 34819702 - 34819880
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||||||| |||||||| ||||||| | |||  |||  |||||||||||||   |||||||||||||||||||||  |||||||||||||||||||||||    
T  34819702 caccttagtgtaccataacacatagccatccgccatccgccatgtctgctcctgtgcctgctcaccccaatcggctgccttaagcgtgtgagtgcggaag 34819801  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||||| |||| |||||||||||||||||| ||||| |||||||| ||| |||||||||||||  ||||||||||||    
T  34819802 tcgacgaatgcctacacaatctgaggcggtggcagctctacaacatccgtcggatgtctagggacgctctggacgtatc 34819880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 30761071 - 30761286
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |     
T  30761071 tggtcctactgatgctgctggtgcctcctcctcggcctctggcctcgcctcctggccaatatcggcgcgatctgctccctaacatggctcatggcctgaa 30761170  T
Q  591 tccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| || | | |||||||   | ||||||| | || |||  ||||| | ||||||||| || | |||||||||||| | |||||||||||||||||| |    
T  30761171 accactgttgagggctcatgacctcctcctggcacatctgtgcatcagcgtaggcaacagcggcactaaccatgtcataggtatcaggcgagcttctcac 30761270  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||| ||||    
T  30761271 ctcataccgcttccac 30761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 739 - 879
Target Start/End: Original strand, 39831873 - 39832013
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||    
T  39831873 gccatgtctgctctcctgcctgctcaccccaatcgaccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggcggtgacagctc 39831972  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||||| | ||| |||||||||||||    
T  39831973 tacaacatcggtcggatgtctggagacggtctggacgtatc 39832013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 485 - 699
Target Start/End: Complemental strand, 35554852 - 35554635
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||| ||||||||||||| ||| ||| || ||||||||||||||||||||  |||||    
T  35554852 tactcctggtcctgctgatggtgctggtgcctcctcctcggcctctgtcctcgcctcctggtcaaaatcggcacgatctgctccctaacatgggtcatgg 35554753  T
Q  585 cctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  |||||||| | |||||||   | |||||||||| |  ||| ||||| | |||||||||||| | |||||||||||| | || |||||||||||    
T  35554752 cctgaaaccattgctgagggctcatgaactcctcctgacctatttgcgcatcagcgtaggcaacaacggcactaaccatgtcataggtgtcaggcgagct 35554653  T
Q  682 tctcgcctcgtaccgctc 699  Q
    ||| ||||||||||||||    
T  35554652 tcttgcctcgtaccgctc 35554635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 733 - 879
Target Start/End: Complemental strand, 52015 - 51869
Alignment:
Q  733 tcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtgg 832  Q
    ||||| |||||||||||||| |||| ||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| |||||     
T  52015 tcatatgccatgtctgctctcatgcatgctcaccccaatcgaccgccttaagcgtgtgagtgcggaagtcgacgaaatcctgcacaatctgagtcggtga 51916  T
Q  833 tagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     ||||| |||||||| | | ||||||||||||| | |||||||||||    
T  51915 cagctctacaacatctgacggatgtctagggacggactggacgtatc 51869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 488 - 703
Target Start/End: Complemental strand, 52343 - 52125
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||| ||||||||   ||||| |||||||| | | |||||||||||||||||||||||| ||| |||||||||  ||||||||| ||||||||    
T  52343 tcttggtcctgttgatgctgtcagtgccccctcctcggcatgtggcctcgcctcctggccaatatcggcgtgatctgctctttaacatggctcatggcct 52244  T
Q  588 cagtccattgctcatggctcatcacctcct---gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttct 684  Q
     |  |||||||| | ||||||| |||||||   | |||| |||  |||||   ||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  52243 gaaaccattgctgagggctcatgacctcctccaggcccatctgtgcatcagagtaggcaacaacgccgctaaccatgtcatagatatcaggtgagcttct 52144  T
Q  685 cgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||    
T  52143 cgcctcgtaccgctcccac 52125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 710 - 878
Target Start/End: Original strand, 34367711 - 34367879
Alignment:
Q  710 gtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaa 809  Q
    |||||||||||||||| | |||  |||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||     
T  34367711 gtaccatagcacatagccatccgccatccgccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcgaaagtcgacgaac 34367810  T
Q  810 gcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    ||||||||||| | ||||||||| || || |||||||||||| |||||||  |||  ||||||||||||    
T  34367811 gcctgcacaatgtaaggcggtgggaggtctacaacatcagtcggatgtctgaggatggtctggacgtat 34367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 739 - 887
Target Start/End: Original strand, 40075823 - 40075971
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  ||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||    
T  40075823 gccatgtctgctcttgtgcctgctcaccccaatcggttgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggtggtgtcagctc 40075922  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatctgtgctgc 887  Q
     |||||||| ||| |||||||||||| | |||||| |||||||| ||||    
T  40075923 tacaacatccgtctgatgtctagggattctctggatgtatctgtactgc 40075971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 741 - 879
Target Start/End: Original strand, 5301439 - 5301577
Alignment:
Q  741 catgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaa 840  Q
    ||||||||||||  ||||||||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||| |    
T  5301439 catgtctgctctcctgcctgctcgcctcaatcggccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggtagtgggagctcta 5301538  T
Q  841 caacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||||| ||| ||||||||||||| || ||||||||||    
T  5301539 caacatccgtcggatgtctagggacggtatggacgtatc 5301577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 35554522 - 35554382
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||    
T  35554522 gccatgtctgcttttgtgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaattcctgcacaatctgaggcggtgtcagctc 35554423  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||  ||| ||| |||||||||||||  ||||||||||||    
T  35554422 tacattatccgtcggatgtctagggaccctctggacgtatc 35554382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 492 - 703
Target Start/End: Complemental strand, 20859270 - 20859056
Alignment:
Q  492 ggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagt 591  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||| ||| ||||||| |||||||||| ||||| |||||||| |      
T  20859270 ggtcttgctgatgctgctggtgcctcctcctcggcctctggcctcgcctcttggtcaagatcggcgcgatttgctccctaagatggctcatggcctgaaa 20859171  T
Q  592 ccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcc 688  Q
    ||| |||| | |||||||   | ||||||| |||| |||  |||||   |||||||||||| | |||||||||||| | || |||| |||||||||||||    
T  20859170 ccactgctgagggctcatgacctcctcctggcccatctgtgcatcagtgtaggcaacaacggcactaaccatgtcataggtgtcagtcgagcttctcgcc 20859071  T
Q  689 tcgtaccgctcccac 703  Q
    || ||||||||||||    
T  20859070 tcataccgctcccac 20859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 701 - 878
Target Start/End: Complemental strand, 39604252 - 39604076
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| ||||||||| |||||||| |||  |||  | ||||||| ||||  ||| |||||||||||||||||| |||||||||||||||||||||||    
T  39604252 caccctagtgtaccataggacatagtcatccgccatccgtcatgtctactctcctgcatgctcaccccaatcggccaccttaagcgtgtgagtgcggaag 39604153  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    |||||||| ||||||||||| | ||||||||| || || |||||||| ||| ||||||| ||||  ||||||||||||    
T  39604152 tcgacgaacgcctgcacaatgtaaggcggtggcaggtctacaacatccgtcggatgtct-gggatggtctggacgtat 39604076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 485 - 699
Target Start/End: Original strand, 40075493 - 40075710
Alignment:
Q  485 tactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatgg 584  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||| ||| ||| ||| |||||||||||||||||||||||  |||||    
T  40075493 tactcctggtcctgctgatgttgctggtgcctcctcctcggcctctggcctcgcctcatggtcaagatcggcgcgatctgctccctaacatgggtcatgg 40075592  T
Q  585 cctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    ||| |  ||| |||| | |||||||   | ||||||| || | |||| ||| | | |||||||||    | |||||||||||| | || | |||||||||    
T  40075593 cctgaaaccactgctgagggctcatgacctcctcctggcctatctgcgcattagcgtaggcaacagtagcactaaccatgtcataggtgttaggcgagct 40075692  T
Q  682 tctcgcctcgtaccgctc 699  Q
    ||||||||||||||||||    
T  40075693 tctcgcctcgtaccgctc 40075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 464 - 687
Target Start/End: Complemental strand, 22501130 - 22500904
Alignment:
Q  464 atcctaaacataaaatactattactcttggtcctgctgatgctgctgg---tgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcga 560  Q
    ||||||||||| |||||||   ||||||| | |||||| | ||||| |   ||| ||||||||| |||| ||| ||||||||| | ||||||| | || |    
T  22501130 atcctaaacatcaaatactcaaactcttgttgctgctgctcctgctcggcatgctgcctcctcggcctccggcatcgcctcctagtcaatatcggtgcta 22501031  T
Q  561 tctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccat 660  Q
    ||||||||||||||||||||| |||| |||   | |||||| |||| |||||||| |||||||| ||||||||| |||||| || |||||| ||||||||    
T  22501030 tctgctccctaacatggcgcaaggccgcagattaatgctcaaggcttatcacctcttgacccaagtgctcatcatcataggaaataacgccactaaccat 22500931  T
Q  661 gtcacaagtatcaggcgagcttctcgc 687  Q
     ||| | ||||||||||||| ||||||    
T  22500930 atcataggtatcaggcgagcctctcgc 22500904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 754 - 879
Target Start/End: Original strand, 41243210 - 41243335
Alignment:
Q  754 atgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcag 853  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||||||||| ||||||||||| | ||||||||| || || |||||||| ||| |    
T  41243210 atgcctgctcaccccaatcgtctgccttaagcgtgtcagtgcggaagtcgacgaacgcctgcacaatgtaaggcggtggcaggtctacaacatctgtcgg 41243309  T
Q  854 atgtctagggactgtctggacgtatc 879  Q
    |||||| ||||  |||||||||||||    
T  41243310 atgtctggggatggtctggacgtatc 41243335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 20858978 - 20858800
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  ||| | |||||| ||||||  ||||||||||| ||||| |||| ||||||| ||||||||| |||||    
T  20858978 caccctagtgtaccataacacatagccatccgccatcatccatgtatgctctcctgcctgctcactccaataggccgccttaagggtgtgagtgtggaag 20858879  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    | |||||| ||||||||||||| ||||||||  | ||| |||||||| ||| ||||| | ||||| |||||||||||||    
T  20858878 ttgacgaatgcctgcacaatctaaggcggtgacaactctacaacatccgtcggatgtttggggacggtctggacgtatc 20858800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 45133408 - 45133330
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  45133408 aattgttgctgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgcccttcggcagttaactgtcgagg 45133330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 39831544 - 39831765
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||||||||||||| |||  |||||||| |||||||||||||||||||| ||| ||  ||||||||||||||| || |||||  |||||||       
T  39831544 tggtcctgctgatgctgctgttgcatcctcctcggcctctggcctcgcctcctggtcaagataggcgcgatctgctcccaaagatggcttatggcctgga 39831643  T
Q  591 tccattgctcatggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
     ||| |||| | || ||||         | ||||||| || |||||||||||| |||||||||||||||| |||||||||||| | |  ||  |||||||    
T  39831644 accactgctgaggggtcatgctcatggcctcctcctggcctaactgctcatcagcataggcaacaacgccactaaccatgtcataggagtccagcgagct 39831743  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    ||||||||| ||||||||||||    
T  39831744 tctcgcctcataccgctcccac 39831765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 758 - 878
Target Start/End: Complemental strand, 43214311 - 43214191
Alignment:
Q  758 ctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgt 857  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| | || ||  ||||||||||| |||||    
T  43214311 ctgctcaccccaatcgttcgccttaagcgtgtgagtgcggaagtcgacgaacgcctgcacaatgtaaggcggtcggaggtctgcaacatcagtcggatgt 43214212  T
Q  858 ctagggactgtctggacgtat 878  Q
    || ||||  ||||||||||||    
T  43214211 ctggggatggtctggacgtat 43214191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 740 - 823
Target Start/End: Original strand, 30761417 - 30761500
Alignment:
Q  740 ccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctg 823  Q
    |||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||    
T  30761417 ccatgtctgctctcctgcatgctcaccccaatcggccaccttaagcgtgtgagtgcggaagtcgacgaatgcttgcacaatctg 30761500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 604 - 702
Target Start/End: Complemental strand, 5680003 - 5679905
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctccca 702  Q
    ||||||||||||||||||||| | ||||||| ||| ||||||| ||||  | ||||||||| | |||||||||||||||||||||||||||||||||||    
T  5680003 gctcatcacctcctgacccaaatactcatcagcatgggcaacagcgccagtgaccatgtcataggtatcaggcgagcttctcgcctcgtaccgctccca 5679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 1055772 - 1055569
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  1055772 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 1055673  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  1055672 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 1055573  T
Q  700 ccac 703  Q
    ||||    
T  1055572 ccac 1055569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 23019098 - 23019301
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  23019098 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 23019197  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  23019198 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 23019297  T
Q  700 ccac 703  Q
    ||||    
T  23019298 ccac 23019301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 26662693 - 26662490
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  26662693 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 26662594  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  26662593 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 26662494  T
Q  700 ccac 703  Q
    ||||    
T  26662493 ccac 26662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 612 - 703
Target Start/End: Complemental strand, 43214518 - 43214427
Alignment:
Q  612 cctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  43214518 cctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtatcaggcgagcttctcgcctcataccgctcccac 43214427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 12716091 - 12716261
Alignment:
Q  505 ctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatgg 604  Q
    |||||| ||||||||||||| ||||||||||||||||||   ||||||| |||||||||||||||||||||||| |||||| | |  |||||| | |       
T  12716091 ctgctgttgccgcctcctcggcctctggcctcgcctcct-atcaatatcggcgcgatctgctccctaacatggctcatggcttgaaaccattgttgagaa 12716189  T
Q  605 ctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatca 673  Q
    |||||   | |||||||||||| |||| ||||| ||||||||| | || | |||||||||||| | ||||||    
T  12716190 ctcatgacctcctcctgacccatctgcgcatcagcataggcaatagcggcactaaccatgtcataggtatca 12716261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 703
Target Start/End: Original strand, 15033570 - 15033779
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| | || |     
T  15033570 tgctgatggtgcctcctcctcggcctctgggctcgcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactactgag 15033669  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || || ||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  15033670 gggtcatgctcatgacctcctcctggcctaattgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 15033769  T
Q  694 ccgctcccac 703  Q
    | ||||||||    
T  15033770 ctgctcccac 15033779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 398 - 575
Target Start/End: Original strand, 21176045 - 21176219
Alignment:
Q  398 aaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaacataaaatactattactcttggtcct 497  Q
    |||||||||||||||| |||| ||    |||  ||||||||||||||||||||||| | ||||| ||||||||||| ||||||||| |||      ||||    
T  21176045 aaatgtcatgaaaatacaacggaactaacaaaggtcatgaaaatatacaccaagtcctaaaaatctatcctaaacagaaaatactactac---gtatcct 21176141  T
Q  498 gctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacat 575  Q
    ||||||| || || |||| || ||| | ||||| |||||||||||||| ||  | | |||||||||||||||||||||    
T  21176142 gctgatgttgttgttgcctccaccttggcctctagcctcgcctcctggtcatgaacggcgcgatctgctccctaacat 21176219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 488 - 587
Target Start/End: Original strand, 41239344 - 41239443
Alignment:
Q  488 tcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||||||||| |  ||||| ||||||| |||||||| |||||||||||||||||||| ||| ||| || ||||||||||||| | ||||| ||||||||    
T  41239344 tcttggtcctggtcctgctgatggtgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcacgatctgctccctcatatggctcatggcct 41239443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 517 - 703
Target Start/End: Original strand, 486552 - 486747
Alignment:
Q  517 cctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgct-------catggctcat 609  Q
    |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| ||||       |||| |||||    
T  486552 cctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgtggggtcatg-ctcat 486650  T
Q  610 cacctcct---gacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
     |||||||   | || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||||||| ||||    
T  486651 gacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctgccac 486747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 15033911 - 15034035
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||||||   |||||||||   ||||||||| || |    |||||||||| ||    
T  15033911 tgcctgctcaccccgatcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggtgggaggttcctaacatcagtcgga 15034010  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  15034011 tgtctggggatggtctgcacgtatc 15034035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 34367429 - 34367513
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    ||||| || |||| |||||||| || ||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||||||||    
T  34367429 tgctgatgctgcctcctcctcggcccctggcctcgcctcctggtcaaaatcagcgcgatctgctccctcatatggctcatggcct 34367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 42482317 - 42482520
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  42482317 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgaggggtca 42482416  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| |  |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||| ||||||| |||||||     
T  42482417 tgctcatgacctcctcctggcataactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttatcgcctcataccgctg 42482516  T
Q  700 ccac 703  Q
    ||||    
T  42482517 ccac 42482520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 35555307 - 35555229
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||  |||| ||| |||| |||||| || |||||    
T  35555307 aattgttgttgacacatcttgttaggctgagaaacacaagtaaaataccaaaatacccctcggtagttaactgccgagg 35555229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 5680193 - 5680120
Alignment:
Q  398 aaatgtcatgaaaataaaacgaaatggccaagtgtcatgaaaatatacaccaagtcatgaaaatatatcctaaa 471  Q
    ||||||||||||||||||||| || |  ||| |||||||||||||||||||||||| | ||||| |||||||||    
T  5680193 aaatgtcatgaaaataaaacggaacgaacaaatgtcatgaaaatatacaccaagtcctaaaaatctatcctaaa 5680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 703
Target Start/End: Original strand, 41243033 - 41243098
Alignment:
Q  638 taggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||||| || | |||||||||||| | || |||||||||||||||||||||||||||||||||    
T  41243033 taggcaacagcggcactaaccatgtcataggtgtcaggcgagcttctcgcctcgtaccgctcccac 41243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 22642 - 22766
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  22642 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 22741  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  22742 tgtctggggatggtctgcacgtatc 22766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 1055437 - 1055313
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  1055437 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 1055338  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  1055337 tgtctggggatggtctgcacgtatc 1055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 23019433 - 23019557
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  23019433 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 23019532  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  23019533 tgtctggggatggtctgcacgtatc 23019557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 26662358 - 26662234
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  26662358 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 26662259  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  26662258 tgtctggggatggtctgcacgtatc 26662234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 38331164 - 38331094
Alignment:
Q  144 ttgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    ||||||||||||||| |||| ||||||||| |||||||||  ||||||||||| |||||||| || |||||    
T  38331164 ttgacacatcttgtttggctgagaaacacatgtaaaataccaaaatgcccttctgcagttaactgccgagg 38331094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 22430 - 22510
Alignment:
Q  623 aactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||| ||||||||| ||||||| ||||    
T  22430 aactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcctctcgcctcataccgctgccac 22510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 42482652 - 42482776
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || ||| |||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  42482652 tgcctgctcaccccgagcgtccgcctcaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 42482751  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  42482752 tgtctggggatggtctgcacgtatc 42482776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 703
Target Start/End: Original strand, 5301271 - 5301321
Alignment:
Q  653 ctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  5301271 ctaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctcccac 5301321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 804
Target Start/End: Original strand, 486879 - 486928
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcga 804  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||    
T  486879 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcga 486928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 45133218 - 45133185
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgt 281  Q
    ||||||||||||||||||||||||||||||||||    
T  45133218 ggcagaacctgttacatgtgtttttacacattgt 45133185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 23022385 - 23022347
Alignment:
Q  174 agtaaaatacgtaaatgcccttcggcagttaattgtcga 212  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  23022385 agtaaaatacgaaaatgcccttcggcagttaactgtcga 23022347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 35555567 - 35555489
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaattgtcgagg 214  Q
    ||||||| || |||||||||||||| || |||||||| ||||||||||  |||| ||| |||| |||||| || |||||    
T  35555567 aattgttgttaacacatcttgttagactgagaaacacgagtaaaataccaaaatacccctcggtagttaactgccgagg 35555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 40075070 - 40075139
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||| ||||||||| | |||||||| ||| |||| |||||  ||| ||||||||||||| |||||||    
T  40075070 aattgttgttgacacatttggttaggctgagacacacgagtaatttacttaaatgcccttcgacagttaa 40075139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 1e-74; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 279 - 587
Target Start/End: Original strand, 2405634 - 2405946
Alignment:
Q  279 tgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacatatatgtc 378  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| | |||||||    
T  2405634 tgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaaccaataattatcataaaaatatgtc 2405733  T
Q  379 atcaaaa------caaagtaacaataaatgtcatgaaaataaaacgaaatggccaag-tgtcatgaaaatatacaccaagtcatgaaaatatatcctaaa 471  Q
    ||| |||      |||||||||||   |||||||||||||| |||| || |   ||  ||||||||||||||||||||| || | ||||| |||||||||    
T  2405734 atcgaaataccaacaaagtaacaa---atgtcatgaaaatacaacggaacgaataaaatgtcatgaaaatatacaccaaatcctaaaaatctatcctaaa 2405830  T
Q  472 cataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctcccta 571  Q
    |||||||||||| |  || |||||||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||| ||| |||||||||||||| ||    
T  2405831 cataaaatactactggtcctggtcctgctgatgttgctggtgcctcctcctcggcctctagcctcgcctcctggtcaagatcggcgcgatctgctccgta 2405930  T
Q  572 acatggcgcatggcct 587  Q
    ||||||  ||||||||    
T  2405931 acatgggtcatggcct 2405946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 273 - 577
Target Start/End: Complemental strand, 2407698 - 2407396
Alignment:
Q  273 acacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgatacggaaacgaacaattgtcatacata 372  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| | |    
T  2407698 acacattgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataattaaaattgaaaatatgatacgaaaacgaacaattgttataaaaa 2407599  T
Q  373 tatgtcatcaa------aacaaagtaacaataaatgtcatgaaaataaaacgaaatg-gccaagtgtcatgaaaatatacaccaagtcatgaaaatatat 465  Q
    ||||||||| |      |||||||||||   ||||||||| |||||| |||| || |  | || ||| |||||||||||||||||||| | ||||| |||    
T  2407598 tatgtcatcgaaataccaacaaagtaac---aaatgtcattaaaatacaacggaacgaacaaaatgttatgaaaatatacaccaagtcctaaaaatctat 2407502  T
Q  466 cctaaacataaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgc 565  Q
    ||||||||||||||||||       ||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||| ||| |||  ||||||||||    
T  2407501 cctaaacataaaatacta------ctggtcctgctgatgctgctagtgcctcctcctcggactctggcctcgcctcctggtcaagatcgacgcgatctgc 2407408  T
Q  566 tccctaacatgg 577  Q
    || |||||||||    
T  2407407 tctctaacatgg 2407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 248 - 381
Target Start/End: Original strand, 24885223 - 24885356
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgtttcaatgtcaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgata 347  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24885223 ggcagaacttgttacatgtgtttttacacattgtttcaatgccaaatcataaagtcaatcaaagaaaattaccaacataattgaaattgaaaatatgata 24885322  T
Q  348 cggaaacgaacaattgtcatacatatatgtcatc 381  Q
    ||||||||||||||||||||| | ||||||||||    
T  24885323 cggaaacgaacaattgtcataaaaatatgtcatc 24885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 31771001 - 31770861
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||    
T  31771001 gccatgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaacgcctacacaatgtgaggcggtggcagctc 31770902  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||||| ||||| |||||||||||||    
T  31770901 tacaacatccgtcggatgtctggggacggtctggacgtatc 31770861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 741 - 873
Target Start/End: Original strand, 2406155 - 2406287
Alignment:
Q  741 catgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaa 840  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||      
T  2406155 catgtctgctctcctgcctgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaatgcctgcacaatctgaggcggtggcagctctg 2406254  T
Q  841 caacatcagtcagatgtctagggactgtctgga 873  Q
    ||||||| |||| | |||||||||| |||||||    
T  2406255 caacatccgtcataagtctagggacagtctgga 2406287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 491 - 703
Target Start/End: Original strand, 18001604 - 18001819
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||||||||| || ||||||| |||||||| |||||  ||||||||||||||||||||  ||||||||||||| |||||||||| |||||||| |     
T  18001604 tggtcctgctgatgttgttggtgcctcctcctcggcctctaacctcgcctcctggccaatattggcgcgatctgctctctaacatggctcatggcctgaa 18001703  T
Q  591 tccattgctcatggctcatcacc---tcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     |||||| | | ||||||| |||   ||||| |||| |||  ||||| | ||||||||| ||||| ||||||||||| | |||||| |||||||||||||    
T  18001704 accattgatgagggctcatgacctcttcctggcccatctgtgcatcagcgtaggcaacatcgccgttaaccatgtcataggtatcaagcgagcttctcgc 18001803  T
Q  688 ctcgtaccgctcccac 703  Q
    || |||||||||||||    
T  18001804 cttgtaccgctcccac 18001819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 534 - 694
Target Start/End: Complemental strand, 21603596 - 21603436
Alignment:
Q  534 ctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatc 633  Q
    |||||||||||| ||||||| | ||||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||| ||||||    
T  21603596 ctcgcctcctggtcaatatcggtgcgatctgctctctaacatggcgcatggccgcagaccattgctcagggctcatcacctcttgacccaacttctcatc 21603497  T
Q  634 aacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtac 694  Q
    |||||||||||||| ||   ||| ||| ||| | |||||| |||||| |||||||||||||    
T  21603496 aacataggcaacaaagctagtaatcatctcataggtatcaagcgagcctctcgcctcgtac 21603436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 26440368 - 26440228
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||||||||||||  |||| ||||||||||||| | | ||||||||||||||||||||||||||||||| || |||||||| | |||| |||| || ||    
T  26440368 gccatgtctgctctcctgccggctcaccccaatcagtcgccttaagcgtgtgagtgcggaagtcgacgaacgcttgcacaatgtaaggcagtgggaggtc 26440269  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||||||||||||||||||||  |||||||||||||    
T  26440268 tacaacatcagtcagatgtctagggatggtctggacgtatc 26440228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 740 - 879
Target Start/End: Original strand, 18005570 - 18005709
Alignment:
Q  740 ccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctca 839  Q
    |||||| | ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||  | |||     
T  18005570 ccatgtttcctctgctgcatgctcaccccaatcggccgccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctcagtcggtgacatctct 18005669  T
Q  840 acaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    |||||| |   ||||||||||||||| |||||||||||||    
T  18005670 acaacagctaacagatgtctagggacggtctggacgtatc 18005709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 701 - 847
Target Start/End: Complemental strand, 26172883 - 26172737
Alignment:
Q  701 caccttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaag 800  Q
    |||| ||| |||||||| ||||||| | |||  |||  || |||||||||||  |||||||| | ||||||||||| |||||||||||||||||||||||    
T  26172883 caccctagtgtaccataacacatagacatccgccatccgcaatgtctgctctcctgcctgcttatcccaatcggccgccttaagcgtgtgagtgcggaag 26172784  T
Q  801 tcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatc 847  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  26172783 tcgacgaatgcctgcacaatctgaggcggtggcagctctacaacatc 26172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 704 - 879
Target Start/End: Complemental strand, 3384391 - 3384216
Alignment:
Q  704 cttagcgtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcg 803  Q
    ||||| ||| |||| ||||||| ||||||||||| ||||||||||||||| |||||||||||  ||||||| |||||||||||||||| || | |||||     
T  3384391 cttagtgtatcataacacatagccctccctcatatgccatgtctgctctgctgcctgctcacttcaatcggtctccttaagcgtgtgaatgtgaaagtct 3384292  T
Q  804 acgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
    ||||| | |||||||||||||||| |||  | ||| |||||||| ||  ||||||||||||  || ||||||||||    
T  3384291 acgaatgtctgcacaatctgaggcagtgtcatctctacaacatccgtaggatgtctagggatcgtatggacgtatc 3384216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 32641776 - 32641875
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||||   ||||||| ||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  32641776 gctcatcacctcctgacccaaaaactcatcagcatgggcaacaacgccgctaaccatgtcataggtatcaggcgagcttctcgcctcgtaccgctcccac 32641875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 734 - 887
Target Start/End: Original strand, 24085939 - 24086093
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| |||||| |||||||  ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||||||||| || |||||      
T  24085939 catacgccatgcctgctctcctgcatgctcaccccaatcggccgccttaagtgtgtgagtgcggaagtcgacgaaaacatgcacaatctcagtcggtgac 24086038  T
Q  834 agctcaacaacatcagtcagatgtct-agggactgtctggacgtatctgtgctgc 887  Q
    ||||| |||||||| | |  |||||| |||||| |||||||||||||||| ||||    
T  24086039 agctctacaacatccgacgaatgtctaagggacggtctggacgtatctgtactgc 24086093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 32643152 - 32642934
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    ||||||||||| ||||||||||||| |||||||  ||||| |||||||||| |||  |  ||| |||||||||||| ||||||||   ||| |||| ||     
T  32643152 tggtcctgctggtgctgctggtgcctcctcctcagcctctagcctcgcctcatggtaatgatcggcgcgatctgctgcctaacatcatgcaaggccacat 32643053  T
Q  591 tccattgc-------tcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttc 683  Q
     | | |||       ||||| ||||||||||||||||||||   ||||||| ||| |||||||||||| |||||||||||| | |||||||| |||||||    
T  32643052 acaactgccgaggggtcatg-ctcatcacctcctgacccaaaaactcatcagcatgggcaacaacgccactaaccatgtcataggtatcaggggagcttc 32642954  T
Q  684 tcgcctcgtaccgctcccac 703  Q
    ||||||||||||||||||||    
T  32642953 tcgcctcgtaccgctcccac 32642934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 739 - 879
Target Start/End: Complemental strand, 2407170 - 2407030
Alignment:
Q  739 gccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctc 838  Q
    ||||| ||||||||  |||||| ||||| | ||||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||  |||| |||||    
T  2407170 gccatttctgctctcctgcctgttcacctcgatcggccgccttaagcgtgtaagtgcggaagtcgacgaatgtctgcacaatttgaggtagtggcagctc 2407071  T
Q  839 aacaacatcagtcagatgtctagggactgtctggacgtatc 879  Q
     |||||||| ||| ||||| ||||||| |||| ||||||||    
T  2407070 tacaacatccgtcggatgtttagggacggtctagacgtatc 2407030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 475 - 664
Target Start/End: Original strand, 24885416 - 24885608
Alignment:
Q  475 aaaatactattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaaca 574  Q
    |||||| || ||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||  ||| ||| | |||||| |||||||||||    
T  24885416 aaaatattactactcctggtcctgctgatgctgctggtgcctccttctcggcctctggcctcgcctcctgctcaagatcggtgcgatccgctccctaaca 24885515  T
Q  575 tggcgcatggcctcagtccattgctcatggctcat---cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtca 664  Q
    |||  |||||||| |  | | |||| | |||||||   | |||||||||| | |||| ||||| | ||||||||| || | ||||||||||||    
T  24885516 tgggtcatggcctgaaacaactgctgagggctcatgacctcctcctgacctatctgcgcatcatcgtaggcaacagcgacactaaccatgtca 24885608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 482 - 703
Target Start/End: Complemental strand, 31771329 - 31771110
Alignment:
Q  482 tattactcttggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgca 581  Q
    ||||||| ||| ||||| |  ||||| || |||| |||||||| |||||||||||||||||||| ||| ||| ||| |||||||||||||| ||||| ||    
T  31771329 tattactattgttcctggtcctgctgatgttgcctcctcctcggcctctggcctcgcctcctggtcaaaatcggcgtgatctgctccctaatatggctca 31771230  T
Q  582 tggcctcagtccattgctcatggctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagct 681  Q
    |||||| |  ||| |||| | || ||||   |||||| || |||||| ||||| | |||||||||||||| | |||||||||| | || ||| ||||| |    
T  31771229 tggcctgaaaccactgctgaggggtcat--gctcctggcctaactgcgcatcagcgtaggcaacaacgccacaaaccatgtcataggtgtcaagcgagtt 31771132  T
Q  682 tctcgcctcgtaccgctcccac 703  Q
    |||| |||| ||| ||||||||    
T  31771131 tctcacctcatactgctcccac 31771110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 22304482 - 22304273
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  22304482 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 22304383  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| ||    
T  22304382 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcata 22304283  T
Q  694 ccgctcccac 703  Q
    ||||||||||    
T  22304282 ccgctcccac 22304273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 491 - 703
Target Start/End: Complemental strand, 26173174 - 26172960
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcag 590  Q
    |||||||  ||||||||||||||||  ||||||| ||||| |||||||||| ||  ||| ||| |||||||||||||| ||| ||||| |||||||| |     
T  26173174 tggtcctattgatgctgctggtgccttctcctcggcctctagcctcgcctcatgatcaagatcggcgcgatctgctcc-taagatggctcatggcctaaa 26173076  T
Q  591 tccattgctcatggctcatcacct---cctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgc 687  Q
     ||| |||| | ||||||| ||||   |||| || | |||  ||||| | |||||||||||| | |||||||||||| | || ||||| |||||||||||    
T  26173075 accactgctgagggctcatgaccttctcctggccaatctgtgcatcagcgtaggcaacaacggcactaaccatgtcataggtgtcaggtgagcttctcgc 26172976  T
Q  688 ctcgtaccgctcccac 703  Q
    ||| ||||||||||||    
T  26172975 ctcataccgctcccac 26172960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 766 - 879
Target Start/End: Complemental strand, 32642792 - 32642679
Alignment:
Q  766 cccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagggac 865  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| || |||||  | ||| |||||||| | | |||||||||||||    
T  32642792 cccaatcagccgccttaagcgtgtgagtacggaagtcgacgaaagcctgcacaatctcagccggtgacaactctacaacatccgacggatgtctagggac 32642693  T
Q  866 tgtctggacgtatc 879  Q
     ||| |||||||||    
T  32642692 ggtcaggacgtatc 32642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 6204395 - 6204192
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  6204395 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 6204296  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  6204295 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 6204196  T
Q  700 ccac 703  Q
    ||||    
T  6204195 ccac 6204192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Complemental strand, 11691362 - 11691159
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  11691362 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 11691263  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  11691262 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 11691163  T
Q  700 ccac 703  Q
    ||||    
T  11691162 ccac 11691159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 703
Target Start/End: Original strand, 30826429 - 30826632
Alignment:
Q  509 tggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctca 608  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| | || |||    
T  30826429 tggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcataccactgctgaggggtca 30826528  T
Q  609 t---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctc 699  Q
    |         | ||||||| || |||||| ||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||| |||||||     
T  30826529 tgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacagcgccactaaccatgtcataggtgtcaggcgagcttctcgcctcataccgctg 30826628  T
Q  700 ccac 703  Q
    ||||    
T  30826629 ccac 30826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 503 - 703
Target Start/End: Complemental strand, 27639000 - 27638791
Alignment:
Q  503 tgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcat 602  Q
    ||||| ||||||| |||||||| ||||||| ||| |||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||  ||| |||| |     
T  27639000 tgctgatggtgcctcctcctcggcctctgggctctcctcctggtcaaaatcggcgcgatctgctccctcatatgggtcatggcctcaaaccactgctgag 27638901  T
Q  603 ggctcat---------cacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgta 693  Q
    || ||||         | ||||||| || |||||| ||||| | |||||||||||||| || ||||||||| | || |||||||| ||||||||||| ||    
T  27638900 gggtcatgctcatgacctcctcctggcctaactgcgcatcagcgtaggcaacaacgccactgaccatgtcataggtgtcaggcgaacttctcgcctcata 27638801  T
Q  694 ccgctcccac 703  Q
    ||||| ||||    
T  27638800 ccgctgccac 27638791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 604 - 703
Target Start/End: Original strand, 24085739 - 24085838
Alignment:
Q  604 gctcatcacctcctgacccaactgctcatcaacataggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    |||||||||||||||||||||   ||||||| ||| ||||| ||||||  ||||||| ||| | ||||||||| |||||||||||| |||||||||||||    
T  24085739 gctcatcacctcctgacccaaaaactcatcagcatgggcaataacgccagtaaccatatcataggtatcaggcaagcttctcgccttgtaccgctcccac 24085838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 493 - 587
Target Start/End: Complemental strand, 3502244 - 3502150
Alignment:
Q  493 gtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcct 587  Q
    |||||| ||||| || ||||||  |||||||| |||||||||||||||||||| ||| ||  ||| |||||||||||||| ||||| ||||||||    
T  3502244 gtcctgttgatgttgttggtgcttcctcctcggcctctggcctcgcctcctggtcaagataggcgtgatctgctccctaagatggctcatggcct 3502150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 6204060 - 6203936
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  6204060 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 6203961  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  6203960 tgtctggggatggtctgcacgtatc 6203936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 11691027 - 11690903
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  11691027 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 11690928  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  11690927 tgtctggggatggtctgcacgtatc 11690903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 22304141 - 22304017
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  22304141 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 22304042  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  22304041 tgtctggggatggtctgcacgtatc 22304017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Complemental strand, 27638659 - 27638535
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||| ||||||||||||   |||||||||   ||||||||| || ||   |||||||||| ||    
T  27638659 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgccgaagtcgacgaacatctgcacaatggaaggcggtgggaggtccctaacatcagtcgga 27638560  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  27638559 tgtctggggatggtctgcacgtatc 27638535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 755 - 879
Target Start/End: Original strand, 30826764 - 30826888
Alignment:
Q  755 tgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcaga 854  Q
    |||||||||||||| | || || |||||||||||||||||||||||||||||||   |||||||||   |||||| || || ||   |||||||||| ||    
T  30826764 tgcctgctcaccccgagcgtccgccttaagcgtgtgagtgcggaagtcgacgaacatctgcacaatggaaggcggggggaggtccctaacatcagtcgga 30826863  T
Q  855 tgtctagggactgtctggacgtatc 879  Q
    ||||| ||||  ||||| |||||||    
T  30826864 tgtctggggatggtctgcacgtatc 30826888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 760 - 865
Target Start/End: Complemental strand, 21603290 - 21603185
Alignment:
Q  760 gctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtct 859  Q
    ||||||||||||||| ||||| || || ||||||  ||||||| | |||||| ||||||||| ||| |||| | |||||||||||||  ||| |||||||    
T  21603290 gctcaccccaatcgggctcctaaatcgcgtgagtatggaagtcaatgaaagcttgcacaatcagagtcggtcgcagctcaacaacattcgtcggatgtct 21603191  T
Q  860 agggac 865  Q
    | ||||    
T  21603190 atggac 21603185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 491 - 542
Target Start/End: Original strand, 24085620 - 24085671
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcc 542  Q
    |||||||||||||| |||||||| | |||||||| |||||||||||||||||    
T  24085620 tggtcctgctgatgttgctggtggctcctcctcggcctctggcctcgcctcc 24085671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 32643502 - 32643455
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatac 183  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  32643502 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaatac 32643455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 2407734 - 2407701
Alignment:
Q  248 ggcagaacctgttacatgtgtttttacacattgt 281  Q
    ||||||||||||||||||||||||||||||||||    
T  2407734 ggcagaacctgttacatgtgtttttacacattgt 2407701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 703
Target Start/End: Complemental strand, 3384535 - 3384471
Alignment:
Q  639 aggcaacaacgccgctaaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||||||||  | |||||||||||| | || |||||| |||||||||||||||| |||||||||    
T  3384535 aggcaacaacaacactaaccatgtcataggtgtcaggccagcttctcgcctcgtatcgctcccac 3384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 575
Target Start/End: Original strand, 32641674 - 32641741
Alignment:
Q  508 ctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacat 575  Q
    |||||||| ||||||||  |||||||||||||||||||  |  ||| |||||||||||| ||||||||    
T  32641674 ctggtgcctcctcctcggtctctggcctcgcctcctggtaatgatcggcgcgatctgctgcctaacat 32641741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 81; Significance: 1e-37; HSPs: 4)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 734 - 878
Target Start/End: Complemental strand, 12282 - 12138
Alignment:
Q  734 cataagccatgtctgctctgatgcctgctcaccccaatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggt 833  Q
    |||| ||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||      
T  12282 catacgccatgtctgctctcctgcatgctcaccccaatcgacctccttaagcgtgtgagtgcggaagtcgacgaaagactacacaatctgaggcggtgac 12183  T
Q  834 agctcaacaacatcagtcagatgtctagggactgtctggacgtat 878  Q
    ||||| |||||||| | | ||||||||||||  ||| ||||||||    
T  12182 agctctacaacatccgacggatgtctagggatggtcaggacgtat 12138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 575
Target Start/End: Complemental strand, 12611 - 12527
Alignment:
Q  491 tggtcctgctgatgctgctggtgccgcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacat 575  Q
    ||||| ||||||||||||||||||| |||||||| |||||| ||||||||| |||  |  ||| ||||||||||||  |||||||    
T  12611 tggtcgtgctgatgctgctggtgcctcctcctcggcctctgccctcgcctcttggtaatgatcggcgcgatctgctgtctaacat 12527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 8199 - 8268
Alignment:
Q  136 aattgttattgacacatcttgttaggcttagaaacacaagtaaaatacgtaaatgcccttcggcagttaa 205  Q
    ||||||| |||| |||| ||||||||||||||||||  || |||| || ||||||||| |||| ||||||    
T  8199 aattgttgttgagacatattgttaggcttagaaacatgagcaaaagacttaaatgcccctcggtagttaa 8268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 703
Target Start/End: Complemental strand, 12442 - 12393
Alignment:
Q  654 taaccatgtcacaagtatcaggcgagcttctcgcctcgtaccgctcccac 703  Q
    ||||| ||||| | ||||||||| |||||||| |||||||||||||||||    
T  12442 taaccctgtcataggtatcaggccagcttctcacctcgtaccgctcccac 12393  T

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Target: scaffold0117 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 516 - 651
Target Start/End: Original strand, 19248 - 19383
Alignment:
Q  516 gcctcctcgacctctggcctcgcctcctggccaatatcagcgcgatctgctccctaacatggcgcatggcctcagtccattgctcatggctcatcacctc 615  Q
    ||||||||| |||| || |||||||||||||||||||  | | |||||||||||||||||||  ||||||| ||| |||||||||||||||||||| |||    
T  19248 gcctcctcggcctccgggctcgcctcctggccaatattggtgtgatctgctccctaacatggaacatggccgcagaccattgctcatggctcatcatctc 19347  T
Q  616 ctgacccaactgctcatcaacataggcaacaacgcc 651  Q
    ||| ||||| | ||||||  ||||||||||||||||    
T  19348 ctggcccaaattctcatccgcataggcaacaacgcc 19383  T

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Target: scaffold0117; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 769 - 862
Target Start/End: Original strand, 22450 - 22543
Alignment:
Q  769 aatcggcctccttaagcgtgtgagtgcggaagtcgacgaaagcctgcacaatctgaggcggtggtagctcaacaacatcagtcagatgtctagg 862  Q
    |||||| |||||||| ||||||||| ||||||||   ||| |||||||||||||||   ||| |||||||||||||||| ||| ||||||||||    
T  22450 aatcggactccttaatcgtgtgagtacggaagtcagggaatgcctgcacaatctgatctggtcgtagctcaacaacatctgtcggatgtctagg 22543  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 710 - 772
Target Start/End: Complemental strand, 56534 - 56472
Alignment:
Q  710 gtaccatagcacatagtcctccctcataagccatgtctgctctgatgcctgctcaccccaatc 772  Q
    |||||||||||||||||| ||   |||  ||||||||||||||  ||||||||||||||||||    
T  56534 gtaccatagcacatagtcatctgccatccgccatgtctgctctcctgcctgctcaccccaatc 56472  T

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