View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_high_44 (Length: 446)

Name: NF18178_high_44
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_high_44
NF18178_high_44
[»] chr4 (40 HSPs)
chr4 (201-446)||(43239323-43239568)
chr4 (15-202)||(36382346-36382532)
chr4 (15-198)||(25930692-25930875)
chr4 (18-198)||(29319708-29319888)
chr4 (15-198)||(20129294-20129477)
chr4 (18-198)||(40528997-40529179)
chr4 (15-198)||(13012172-13012355)
chr4 (15-198)||(47500757-47500940)
chr4 (15-180)||(43143584-43143749)
chr4 (15-198)||(26439279-26439462)
chr4 (15-198)||(34407284-34407467)
chr4 (15-180)||(48989330-48989495)
chr4 (15-179)||(3292896-3293060)
chr4 (15-198)||(17511233-17511416)
chr4 (15-182)||(30216742-30216909)
chr4 (15-203)||(10352884-10353072)
chr4 (15-182)||(6690235-6690402)
chr4 (15-198)||(43355888-43356071)
chr4 (27-181)||(42333788-42333942)
chr4 (15-176)||(29995983-29996144)
chr4 (17-182)||(50205079-50205244)
chr4 (15-198)||(6235516-6235687)
chr4 (15-181)||(30077631-30077797)
chr4 (15-163)||(44156670-44156818)
chr4 (15-182)||(26448053-26448219)
chr4 (15-179)||(28877250-28877414)
chr4 (15-158)||(35545977-35546120)
chr4 (15-147)||(1817752-1817884)
chr4 (27-104)||(13392893-13392970)
chr4 (27-104)||(13396032-13396109)
chr4 (56-180)||(30109958-30110084)
chr4 (82-180)||(45194178-45194276)
chr4 (56-170)||(48129978-48130087)
chr4 (97-198)||(27363345-27363446)
chr4 (89-157)||(6254569-6254637)
chr4 (15-49)||(30110108-30110142)
chr4 (15-49)||(48130111-48130145)
chr4 (141-182)||(7769328-7769369)
chr4 (145-182)||(49908782-49908819)
chr4 (145-182)||(5517494-5517531)
[»] chr7 (22 HSPs)
chr7 (15-199)||(36630799-36630983)
chr7 (15-202)||(8394105-8394292)
chr7 (18-198)||(5555471-5555651)
chr7 (18-198)||(3114099-3114279)
chr7 (17-198)||(14777109-14777290)
chr7 (15-182)||(37002144-37002311)
chr7 (15-182)||(34389056-34389223)
chr7 (17-182)||(8867733-8867898)
chr7 (15-166)||(40920003-40920154)
chr7 (15-173)||(35090177-35090335)
chr7 (16-166)||(38638237-38638387)
chr7 (15-178)||(26624749-26624913)
chr7 (15-182)||(33685564-33685731)
chr7 (15-175)||(43184468-43184628)
chr7 (15-163)||(36658200-36658348)
chr7 (15-182)||(7002725-7002892)
chr7 (15-182)||(7048596-7048763)
chr7 (56-125)||(10868514-10868585)
chr7 (107-202)||(26502790-26502885)
chr7 (107-202)||(26589829-26589924)
chr7 (15-49)||(10868456-10868490)
chr7 (137-182)||(10876829-10876874)
[»] chr3 (21 HSPs)
chr3 (15-202)||(34084122-34084309)
chr3 (15-195)||(19390133-19390313)
chr3 (16-198)||(6269427-6269609)
chr3 (15-198)||(22968444-22968627)
chr3 (15-198)||(39771774-39771957)
chr3 (15-182)||(45182981-45183148)
chr3 (15-182)||(11018212-11018379)
chr3 (15-182)||(6930894-6931061)
chr3 (15-198)||(40081741-40081921)
chr3 (15-183)||(27935177-27935345)
chr3 (31-182)||(19565517-19565668)
chr3 (15-182)||(45335875-45336041)
chr3 (15-182)||(33040953-33041120)
chr3 (15-182)||(6503569-6503736)
chr3 (15-182)||(35514266-35514429)
chr3 (122-200)||(22922139-22922217)
chr3 (56-166)||(5135285-5135397)
chr3 (15-63)||(22922214-22922262)
chr3 (15-49)||(5135421-5135455)
chr3 (145-182)||(6890998-6891035)
chr3 (134-182)||(5354709-5354757)
[»] chr8 (15 HSPs)
chr8 (18-200)||(15838268-15838449)
chr8 (15-198)||(29728386-29728569)
chr8 (15-198)||(3648794-3648977)
chr8 (15-178)||(16788025-16788188)
chr8 (15-189)||(34136825-34136999)
chr8 (15-196)||(39914501-39914681)
chr8 (15-182)||(4404008-4404175)
chr8 (15-182)||(23402108-23402275)
chr8 (15-182)||(36408551-36408718)
chr8 (28-160)||(9877242-9877374)
chr8 (15-150)||(42230971-42231104)
chr8 (15-182)||(2729196-2729363)
chr8 (56-163)||(3435288-3435397)
chr8 (89-159)||(40470567-40470637)
chr8 (15-49)||(40470475-40470509)
[»] chr5 (21 HSPs)
chr5 (16-202)||(1776377-1776563)
chr5 (18-198)||(10033911-10034091)
chr5 (15-203)||(13817956-13818144)
chr5 (18-198)||(39657509-39657689)
chr5 (15-198)||(36293621-36293804)
chr5 (15-198)||(26283318-26283501)
chr5 (15-198)||(39434680-39434863)
chr5 (15-195)||(19985926-19986106)
chr5 (31-198)||(3155647-3155814)
chr5 (15-182)||(37254641-37254808)
chr5 (15-163)||(16155016-16155164)
chr5 (15-182)||(17332551-17332718)
chr5 (15-182)||(31680367-31680534)
chr5 (15-182)||(12278860-12279027)
chr5 (18-152)||(16333879-16334013)
chr5 (15-168)||(33430335-33430488)
chr5 (15-182)||(31501716-31501883)
chr5 (15-180)||(36291373-36291538)
chr5 (15-165)||(43068894-43069044)
chr5 (56-169)||(28801300-28801415)
chr5 (146-198)||(14316642-14316694)
[»] chr2 (23 HSPs)
chr2 (18-198)||(42439970-42440150)
chr2 (18-198)||(35962699-35962879)
chr2 (18-198)||(18981601-18981780)
chr2 (18-198)||(32127144-32127324)
chr2 (15-202)||(31581622-31581809)
chr2 (15-198)||(41251634-41251817)
chr2 (15-198)||(6403804-6403987)
chr2 (15-198)||(17445041-17445222)
chr2 (18-198)||(16405584-16405764)
chr2 (45-198)||(2958131-2958283)
chr2 (15-182)||(44084603-44084770)
chr2 (16-176)||(771005-771165)
chr2 (15-182)||(45418583-45418750)
chr2 (18-198)||(2285846-2286026)
chr2 (16-182)||(8147351-8147518)
chr2 (15-163)||(12756837-12756985)
chr2 (18-180)||(8059336-8059498)
chr2 (15-163)||(26162702-26162847)
chr2 (74-182)||(26237957-26238065)
chr2 (56-158)||(4555250-4555354)
chr2 (56-173)||(7072589-7072710)
chr2 (107-162)||(34905969-34906024)
chr2 (15-45)||(26238080-26238110)
[»] chr6 (11 HSPs)
chr6 (18-198)||(34948761-34948941)
chr6 (18-198)||(13837805-13837985)
chr6 (15-198)||(398601-398784)
chr6 (15-182)||(28996730-28996897)
chr6 (15-182)||(18339106-18339273)
chr6 (15-176)||(29743289-29743450)
chr6 (15-163)||(33229336-33229484)
chr6 (86-182)||(31028435-31028531)
chr6 (97-202)||(24697899-24698004)
chr6 (146-182)||(13647017-13647053)
chr6 (107-163)||(3050098-3050154)
[»] scaffold0069 (1 HSPs)
scaffold0069 (15-198)||(17826-18009)
[»] chr1 (15 HSPs)
chr1 (18-198)||(7433429-7433609)
chr1 (15-198)||(42310941-42311124)
chr1 (15-198)||(26144239-26144422)
chr1 (15-195)||(32982056-32982236)
chr1 (15-178)||(3828988-3829150)
chr1 (15-174)||(321377-321536)
chr1 (16-182)||(17445313-17445479)
chr1 (15-182)||(35907552-35907719)
chr1 (76-198)||(23313222-23313345)
chr1 (56-198)||(41972314-41972457)
chr1 (56-182)||(33489687-33489815)
chr1 (15-49)||(33489839-33489873)
chr1 (15-49)||(41972256-41972290)
chr1 (134-167)||(35951464-35951497)
chr1 (146-182)||(44352614-44352650)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-198)||(480457-480640)
[»] scaffold2142 (1 HSPs)
scaffold2142 (15-198)||(506-689)
[»] scaffold0502 (1 HSPs)
scaffold0502 (15-182)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (15-166)||(52941-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-182)||(31480-31647)


Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 201 - 446
Target Start/End: Complemental strand, 43239568 - 43239323
Alignment:
Q  201 tgtctctagatatcagtcccatgatttagtccataccatcgtaatattttatgtttttgtccatcccttgcatagaattttttgcaatattaaagattgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43239568 tgtctctagatatcagtcccatgatttagtccataccatcgtaatattttatgtttttgtccatcccttgcatagaattttttgcaatattaaagattgt 43239469  T
Q  301 gacgtgatcatgtggcctcaatttctgcaatataaaattttggacaaagaatttaataatgaaaaactgaccgtaaacaaatcccatgaggtctctatat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43239468 gacgtgatcatgtggcctcaatttctgcaatataaaattttggacaaagaatttaataatgaaaaactgaccgtaaacaaatcccatgaggtctctatat 43239369  T
Q  401 cgaatgaacctacgaccgtcgatgaaatgaaaagctgccaagagcc 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43239368 cgaatgaacctacgaccgtcgatgaaatgaaaagctgccaagagcc 43239323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 36382346 - 36382532
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  36382346 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaa 36382444  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36382445 tggactttttggttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgccactg 36382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 25930875 - 25930692
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25930875 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 25930776  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25930775 tgggcttttgggttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcc 25930692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 29319708 - 29319888
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29319708 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgg 29319807  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
      |||| |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  29319808 gattttgggttgagtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcc 29319888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 20129477 - 20129294
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20129477 gagatgaaactgtcaatagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 20129378  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  20129377 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 20129294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 40529179 - 40528997
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||     
T  40529179 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatga 40529080  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgac--cgcccggggtcgccatacggtagaaccgcc 198  Q
      |||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  40529079 gtttttaggttgagtttaatgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgcc 40528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 13012355 - 13012172
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  13012355 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 13012256  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  13012255 tgagctttttggttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 13012172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 47500940 - 47500757
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  47500940 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaa 47500841  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  47500840 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 47500757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 43143584 - 43143749
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43143584 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 43143683  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 180  Q
    | | ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43143684 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 43143749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 26439279 - 26439462
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26439279 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26439378  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  26439379 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 26439462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 34407284 - 34407467
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34407284 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 34407383  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  34407384 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 34407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 48989495 - 48989330
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  48989495 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 48989396  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 180  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||  |||||||||| ||||    
T  48989395 tggacttttgagttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcg 48989330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 3292896 - 3293060
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3292896 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3292995  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtc 179  Q
    | | ||||| ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||    
T  3292996 ttggcttttgggttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 17511233 - 17511416
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt-ccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgtta 113  Q
    ||||||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  17511233 gagatgaaccgatcaataatgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgtta 17511332  T
Q  114 atggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| | || |||||| || ||||||||||||||||||||||||    
T  17511333 atgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaaccgcc 17511416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 30216742 - 30216909
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30216742 gagatgaacccgtcaatagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 30216841  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |   ||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30216842 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 30216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 10352884 - 10353072
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| || | ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  10352884 gagatgaatccgacactggtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaa 10352983  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactgt 203  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||| |||||||||  |||||  ||||||| ||||    
T  10352984 tggactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgcccctgt 10353072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6690235 - 6690402
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  6690235 gagacgaacccgtcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaa 6690334  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6690335 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 6690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 43356071 - 43355888
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43356071 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 43355972  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||||| |||| ||| |||||||| | ||||| ||||||||    
T  43355971 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcc 43355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 42333788 - 42333942
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttgg 126  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||    
T  42333788 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 42333887  T
Q  127 ttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 181  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  42333888 ttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgc 42333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 29995983 - 29996144
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||| ||||||||||| ||| |||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||    
T  29995983 gagatgaatccgtcaatagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaa 29996082  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||    
T  29996083 tggactttttggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccggg 29996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 50205079 - 50205244
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||     
T  50205079 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaatt 50205178  T
Q  117 gactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||| |||||  | |||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  50205179 ggcttttgggttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgcc 50205244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 6235687 - 6235516
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6235687 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 6235588  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||||||||| |            ||||||||||||||| |||||||||  ||||||||| |  |||||||||||||||||||||    
T  6235587 tggacttttgg------------gtgcaaaaattatcggtcgagcccgagcgaccgcccagaatcgccatacggtagaaccgcc 6235516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 30077631 - 30077797
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| || ||||||||||||||||||| ||||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  30077631 gagatgaatccggcactagtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaa 30077730  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 181  Q
    || |||||||||||| || |||||||||||| |||||||| ||||| || |||||||||| ||||||    
T  30077731 tgaactttttggttgggtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcgc 30077797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 44156818 - 44156670
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||||||| ||||||||    
T  44156818 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaa 44156719  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    | | ||||| ||||| || ||||||||||||||||||| | ||||||||    
T  44156718 ttggcttttgggttgggtctaatgtgcaaaaattatcggttgagcccgg 44156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 26448219 - 26448053
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||| || ||| |||||||||||||||||||||||| | ||||||||| || ||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  26448219 gagataaatccgccaatagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaa 26448121  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||| ||||   ||||||||||||||||||||||||||| |||||||| ||| ||| ||||||    
T  26448120 tggacttttgggttagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgcc 26448053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 28877250 - 28877414
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||| |||  |||||||    
T  28877250 gagatgaacccatcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaa 28877349  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtc 179  Q
    |   ||||| |||||| | |||||||||||||||||||||| |||||   ||||||| |||||||    
T  28877350 ttagcttttaggttgaatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtc 28877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 35546120 - 35545977
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  35546120 gagatgaacccatcaatagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 35546021  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgag 158  Q
    | | ||||| ||||| || | ||| ||||||||| |||||||||    
T  35546020 ttggcttttgggttgggtctgatgcgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 1817884 - 1817752
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||    
T  1817884 gagatgaatccgacaatagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaa 1817785  T
Q  115 tggactttttggttgagtttaatgtgcaaaaat 147  Q
    ||||||||| | |||  | ||||||||||||||    
T  1817784 tggacttttggattggatctaatgtgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 13392893 - 13392970
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgta 104  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  13392893 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 13396032 - 13396109
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgta 104  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  13396032 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 30110084 - 30109958
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||||||||||| | |||||| |||  | |||||||||||||||||||| ||||||||||| ||||  | ||| || ||||||||||||||||||||    
T  30110084 cctatttgcgtgtgagatttttcatattttgtccaaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcga 30109985  T
Q  154 tcgagcccggacgaccgcccggggtcg 180  Q
    ||||| |||| |||||| |||||||||    
T  30109984 tcgagtccgggcgaccgtccggggtcg 30109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 45194276 - 45194178
Alignment:
Q  82 ttgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 180  Q
    ||||||||  |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| | | |||| |||||||    
T  45194276 ttgcccaatattttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcg 45194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 48130087 - 48129978
Alignment:
Q  56 cctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatc 155  Q
    ||||||||||||||| | ||||||     ||||||||||||||||||||| ||||||||||  ||||| ||||| || |||| |||||||||||||||||    
T  48130087 cctatttgcgtgtgagagttttca-----cccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatc 48129993  T
Q  156 gagcccggacgaccg 170  Q
    |||||||| ||||||    
T  48129992 gagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 27363446 - 27363345
Alignment:
Q  97 tttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 196  Q
    ||||||||| ||||||||||| ||||| ||||| |  |||| ||||||||   |||||||||||||| |||||||||| ||||||||||||||| |||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  197 cc 198  Q
    ||    
T  27363346 cc 27363345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  89 aatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcga 157  Q
    ||||||| |||||| || ||||||||| | ||||| ||||| |||||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 30110142 - 30110108
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  30110142 gagatgaacccgtcaatagtgtgctaaataaaatt 30110108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 48130145 - 48130111
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  48130145 gagatgaacccgtcaatagtgtgctaaataaaatt 48130111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 7769369 - 7769328
Alignment:
Q  141 caaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 7769328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 49908782 - 49908819
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgcc 49908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 5517494 - 5517531
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgcc 5517531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 7e-93; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 36630983 - 36630799
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36630983 gagatgaacccgtcaatagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36630884  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcca 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  36630883 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaaccgcca 36630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 8394292 - 8394105
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8394292 gagataaacccgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaa 8394193  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8394192 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgccactg 8394105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 5555651 - 5555471
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5555651 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgg 5555552  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5555551 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 5555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 3114099 - 3114279
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114099 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 3114198  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  3114199 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcc 3114279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 14777109 - 14777290
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 116  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14777109 gatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 14777208  T
Q  117 gactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
      ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||    
T  14777209 agcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcc 14777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 37002144 - 37002311
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  37002144 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37002243  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||||| | ||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  37002244 ttgacttttggattgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgcc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 34389056 - 34389223
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  34389056 gagatgaacccgtcgataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34389155  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |   ||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34389156 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 34389223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 8867733 - 8867898
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 116  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||     
T  8867733 gatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaatt 8867832  T
Q  117 gactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||| | ||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  8867833 ggcttttggattgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 40920003 - 40920154
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  40920003 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 40920102  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    | | ||||| |||| | | |||||||||||||||||||||||||||||||||    
T  40920103 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccggacg 40920154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 35090335 - 35090177
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  35090335 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaa 35090236  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgccc 173  Q
    | | ||||| ||||| || ||||||||||||||||| |||||||||||| |||||||||    
T  35090235 ttggcttttgggttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 38638237 - 38638387
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  38638237 agatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 38638336  T
Q  116 ggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacg 166  Q
     ||||||| |||||  | |||||||||||||||||| ||||||| ||||||    
T  38638337 tgacttttgggttggatctaatgtgcaaaaattatcaatcgagctcggacg 38638387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 26624913 - 26624749
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26624913 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 26624814  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcg-atcgagcccggacgaccgcccggggt 178  Q
    |  |||||| | ||| || |||| |||||||||||||| ||||||||| | ||||||||||||||    
T  26624813 ttaacttttggattgggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggt 26624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 33685731 - 33685564
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||| |||||||||||||||||||||||||||||   |||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33685731 gagataaacccgtcaatagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33685632  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||| ||||| ||||| ||||||||||||||||||||||||||||||||  |||| ||| |||||||||    
T  33685631 tgggcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgcc 33685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 43184468 - 43184628
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  43184468 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaa 43184567  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccgg 175  Q
    | | ||||| |||| ||| | ||| | |||||||||||||||||||||  |||||||||||    
T  43184568 ttggcttttgggttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccgg 43184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 36658348 - 36658200
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | | ||||||    
T  36658348 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaa 36658249  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    | | ||||| ||||| ||  |||||||||||||||||||||||| ||||    
T  36658248 ttggcttttcggttgggtccaatgtgcaaaaattatcgatcgagtccgg 36658200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 7002892 - 7002725
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||| |||||||||| ||||||||  ||||||||    
T  7002892 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaa 7002793  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || ||||||  ||||||  |||||||||||||| ||||||| ||||||||||    
T  7002792 ttggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 7048763 - 7048596
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||| |||||||||| ||||||||  ||||||||    
T  7048763 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaa 7048664  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || ||||||  ||||||  |||||||||||||| ||||||| ||||||||||    
T  7048663 ttggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 10868514 - 10868585
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttg 125  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  10868514 cctatttgcgcgtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaatgggctttttg 10868585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 26502885 - 26502790
Alignment:
Q  107 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    ||||||||||| ||||| ||||| | ||||| ||||||||   |||||||||||||| |||| ||| |||||||||| ||||| ||||| ||||||    
T  26502885 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaaccaccactg 26502790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 26589829 - 26589924
Alignment:
Q  107 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    ||||||||||| ||||| ||||| | ||||| ||||||||   |||||||||||||| |||| ||| |||||||||| ||||| ||||| ||||||    
T  26589829 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaaccaccactg 26589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 10868456 - 10868490
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||| ||||||||||||||||||    
T  10868456 gagatgaacccgtcaaaagtgtgctaaataaaatt 10868490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 10876829 - 10876874
Alignment:
Q  137 tgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgcc 10876874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 34084122 - 34084309
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34084122 gagatgaacccatcaatagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaa 34084221  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  34084222 tggactttttggttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaaccgccactg 34084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 19390313 - 19390133
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19390313 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 19390214  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 195  Q
    | ||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19390213 tagacttttaggttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacc 19390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 6269427 - 6269609
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 115  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269427 agatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 6269526  T
Q  116 ggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    || ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||    
T  6269527 gggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcc 6269609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 22968444 - 22968627
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22968444 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaa 22968543  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22968544 tgggcttttgggttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcc 22968627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 39771957 - 39771774
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39771957 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 39771858  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  39771857 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 39771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45183148 - 45182981
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  45183148 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45183049  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  45183048 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 11018212 - 11018379
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  11018212 gagatgaacccgtcaattgtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 11018311  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| |||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  11018312 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgcc 11018379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6930894 - 6931061
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  6930894 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaa 6930993  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| |||||  | ||||| |||||||||||||||||||||||| |||||| |||||||||||    
T  6930994 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 6931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 40081741 - 40081921
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40081741 gagatgaacccgtcaatagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 40081839  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    | ||  |||||||||||| |||||| ||||||||||||||||||||||| |||||  || | ||||||||||||||||||||||    
T  40081840 t-gagcttttggttgagtctaatgttcaaaaattatcgatcgagcccgggcgacc-tccagagtcgccatacggtagaaccgcc 40081921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 27935345 - 27935177
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27935345 gagatgaacccgtcaatagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 27935246  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcca 183  Q
    ||  ||||| ||||| ||||||||||||||||||||||||||||||||| |||| |||| |||| ||||    
T  27935245 tgagcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgcca 27935177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 19565517 - 19565668
Alignment:
Q  31 tagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttga 130  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||     
T  19565517 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgg 19565616  T
Q  131 gtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    || ||||||||||||||||||||| || ||||| |||||||||||| |||||    
T  19565617 gtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgcc 19565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45336041 - 45335875
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  45336041 gagatgaatccggcactagtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaa 45335942  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||||||||||| || ||||||| ||||||||||||| ||| |||| |||||||||| |||||||    
T  45335941 t-gactttttggttgggtctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgcc 45335875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 33041120 - 33040953
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||  ||||||||||||||||||| ||||||||    
T  33041120 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaa 33041021  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |   ||||| ||||| || |||| ||||||||||||| ||||||||||  ||||||||||||||||||    
T  33041020 ttagcttttgggttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgcc 33040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6503569 - 6503736
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||  |||||||||||||||||| |||| |||    
T  6503569 gagatgaacccatcaattgtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaa 6503668  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| |||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  6503669 ttggcttttgggttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgcc 6503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 35514429 - 35514266
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||| |||| |||||||||||||||||    ||||||||    
T  35514429 gagatgaacccgtcaatagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttctttttg----tgtgttaa 35514334  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||| |||||  | || | ||| |||||||||||||||||||||||||||| |||||||||||    
T  35514333 tggacttttgggttggatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgcc 35514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 22922217 - 22922139
Alignment:
Q  122 tttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccac 200  Q
    |||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||| ||||||||||    
T  22922217 tttggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgccac 22922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 5135397 - 5135285
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    |||||||| |||||| ||||||| ||||  | |||||||||||||||||||| ||||||||||  ||||| ||||| || |||||| ||||||| |||||    
T  5135397 cctatttgtgtgtgagaattttcggattttgtccaaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T
Q  154 tcgagcccggacg 166  Q
    ||||||| |||||    
T  5135297 tcgagcctggacg 5135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 22922262 - 22922214
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttg 63  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  22922262 gagatgaacccgtcaatagtgtgttaaataaaattccaagatctatttg 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 5135455 - 5135421
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  5135455 gagatgaacccgtcaatagtgtgctaaataaaatt 5135421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 6891035 - 6890998
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgcc 6890998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 5354757 - 5354709
Alignment:
Q  134 taatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |||||||  |||||||  |||||||||||| ||||||||||||||||||    
T  5354757 taatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgcc 5354709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 15838449 - 15838268
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15838449 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttt-gtaaatgtgttaatgg 15838351  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccac 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  15838350 actttttggttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaaccgccac 15838268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 29728386 - 29728569
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29728386 gagatgaacccgtcaatagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 29728485  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  ||||| |||||||| |||||||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  29728486 tgagcttttgggttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgcc 29728569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 3648794 - 3648977
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3648794 gagatgaacccgtcaatagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaa 3648893  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||| | || || |||||||||||||||||||||    
T  3648894 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgcc 3648977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 16788025 - 16788188
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||    
T  16788025 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaa 16788124  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggt 178  Q
    | | ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  16788125 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 34136825 - 34136999
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  34136825 gagatgaacccatcaattgtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34136924  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggt 189  Q
    | ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  34136925 ttgacttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggt 34136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 39914681 - 39914501
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  39914681 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaa 39914583  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 196  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||    
T  39914582 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 39914501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 4404175 - 4404008
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||    
T  4404175 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaa 4404076  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  4404075 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 4404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 23402275 - 23402108
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||| |||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  23402275 gagatgaaccagtcaatagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 23402176  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || |||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  23402175 ttggcttttgggttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 23402108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 36408718 - 36408551
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| |||||||||| ||||||||||||  ||||||||| |||||| | |||||||| |||||| ||| |||||||||||||||||||||||    
T  36408718 gagatgaatccggcaatagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaa 36408619  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||||||| |||||  | |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36408618 tggacttttgggttggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgcc 36408551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 9877374 - 9877242
Alignment:
Q  28 caatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggt 127  Q
    |||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  9877374 caatagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggt 9877275  T
Q  128 tgagtttaatgtgcaaaaattatcgatcgagcc 160  Q
    |  || |||||||||||||||||| ||||||||    
T  9877274 taggtctaatgtgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 42231104 - 42230971
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||| | ||| |||||||| |||||||||||||||||||||||||  |||||||    
T  42231104 gagatgaatccgtcaatagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaa--gtgttaa 42231007  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattat 150  Q
    |||||||||  ||||  |||||||||||||||||||    
T  42231006 tggacttttgagttggatttaatgtgcaaaaattat 42230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 2729196 - 2729363
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| || |||||||||||||||||||||||   |||||||||||||| ||| | |||||| |||||| |||  ||||||||| ||| ||||||||    
T  2729196 gagatgaatccatcaatagtgtgctaaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaa 2729295  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||| ||||| | |||  ||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  2729296 tgggcttttggattggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgcc 2729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 3435397 - 3435288
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||| |||||||||||  |||| ||||| || ||||||||||||||||||||    
T  3435397 cctatttgcgtttgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T
Q  154 tcgagcccgg 163  Q
    || |||||||    
T  3435297 tcaagcccgg 3435288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  89 aatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagc 159  Q
    ||||||| ||||| ||| |||||||||||||||||   ||| || ||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 40470475 - 40470509
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  40470475 gagatgaacccgtcaatagtgtgctaaataaaatt 40470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 2e-84; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 1776377 - 1776563
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 115  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1776377 agatgaacctgtcgatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat 1776476  T
Q  116 ggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  1776477 ggactttttggttgactttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaaccgccactg 1776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 10034091 - 10033911
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10034091 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 10033992  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| |||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  10033991 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgcc 10033911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 13818144 - 13817956
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13818144 gagatgagcccgtcaatagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 13818045  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactgt 203  Q
    ||| ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  13818044 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgcccctgt 13817956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 39657509 - 39657689
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39657509 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatga 39657608  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| |||||||||||||||||| |||||||||| ||||||| | ||||||||||||  |||||||||||    
T  39657609 gcttttgggttgagtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgccatatagtagaaccgcc 39657689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 36293621 - 36293804
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36293621 gagatgaaactgtaaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36293720  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  36293721 tgggcttttgggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcc 36293804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 26283318 - 26283501
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26283318 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26283417  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| | ||||| ||||||||    
T  26283418 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcc 26283501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 39434863 - 39434680
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39434863 gagatgaaactgtcaatagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaa 39434764  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  39434763 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcc 39434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 19986106 - 19985926
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||    
T  19986106 gagatgaacctgtcaatagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaa 19986007  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 195  Q
    ||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||    
T  19986006 tggacttttgggttgaatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcgtcatacggtaaaacc 19985926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 3155647 - 3155814
Alignment:
Q  31 tagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  3155647 tagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttga 3155746  T
Q  131 gtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||||| |||||||||||  |||||||||||| |||||||||| ||||||||||    
T  3155747 gtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcc 3155814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 37254808 - 37254641
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  37254808 gagatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37254709  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||||| ||||| || ||||||||||||||||||||||||||| || |||||||| |||||||||    
T  37254708 ttgacttttgggttgggtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgcc 37254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 16155164 - 16155016
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16155164 gagatgaatctgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaa 16155065  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  16155064 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 16155016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 17332551 - 17332718
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17332551 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 17332650  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || |||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  17332651 ttggcttttgggttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgcc 17332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 31680534 - 31680367
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  31680534 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31680435  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || ||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  31680434 ttggcttttgggttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 31680367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 12278860 - 12279027
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  12278860 gagatgaacctgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 12278959  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | | ||| ||||| || ||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  12278960 ttggcctttgggttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgcc 12279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16333879 - 16334013
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16333879 atgaatccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 16333978  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcg 152  Q
     ||||| |||||| | |||||||||||||||||||    
T  16333979 gcttttgggttgaatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 33430488 - 33430335
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33430488 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33430389  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgac 168  Q
    | | ||||| ||||| || ||||| |||||||||||||||||||||||| ||||    
T  33430388 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 31501716 - 31501883
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||| | ||||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  31501716 gagatgaactcatcaatagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31501815  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || |||||||||||||||||||||||||||||| | | ||||||||||||||    
T  31501816 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgcc 31501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 36291538 - 36291373
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||| |||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  36291538 gagatgaacccgtcaatagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaa 36291439  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 180  Q
    || |||||| ||||   | ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  36291438 tgaacttttaggttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcg 36291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 43069044 - 43068894
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| |||||||||||||||||||||||| |||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  43069044 gagatgaatccggcaatagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaa 43068945  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggac 165  Q
    ||||||||| ||||| || ||||||| ||||||||| ||||||||||||||    
T  43068944 tggacttttgggttgggtctaatgtgaaaaaattattgatcgagcccggac 43068894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 28801415 - 28801300
Alignment:
Q  56 cctatttgcgtgtgacaattttcagattg--cccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||||||||||| |||||||| |||   ||||||||||||||||||||| ||||||||||| ||||| | |||  | ||||||||||||||||||||    
T  28801415 cctatttgcgtgtgagaattttcatatttttcccaaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T
Q  154 tcgagcccggacgacc 169  Q
    ||||||| || |||||    
T  28801315 tcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 14316694 - 14316642
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||||||||||||||| || |||||||||| | |||||||||||||||||||||    
T  14316694 attatcgatcgagcctgggcgaccgcccgagatcgccatacggtagaaccgcc 14316642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 6e-81; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 42440150 - 42439970
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42440150 atgaatccgtcaatagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 42440051  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42440050 gcttttgggtttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 42439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 35962879 - 35962699
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  35962879 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataa 35962780  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35962779 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcc 35962699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 18981780 - 18981601
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  18981780 atgaacccgtcaacagtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatgg 18981681  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18981680 acttttgggttgagtctaatgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcc 18981601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 32127144 - 32127324
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  32127144 atgaacccgtcaatagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatga 32127243  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  32127244 gcttttgggtcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcc 32127324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 31581622 - 31581809
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31581622 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 31581721  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 202  Q
    ||| ||||| || ||||| |||| |||||||| ||||| ||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  31581722 tgggcttttgggatgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgccatacagtagaaccgccactg 31581809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 41251634 - 41251817
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251634 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 41251733  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||||    
T  41251734 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcactacacggtagaaccgcc 41251817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 6403804 - 6403987
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6403804 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 6403903  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  6403904 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 6403987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 17445041 - 17445222
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445041 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17445140  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| ||  |||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||    
T  17445141 tgggcttttgggttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcc 17445222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 16405764 - 16405584
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||     
T  16405764 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatga 16405665  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| ||| ||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||    
T  16405664 gcttttgggttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaaccgcc 16405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 2958131 - 2958283
Alignment:
Q  45 aaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaa 144  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  145 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 2958283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 44084603 - 44084770
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  44084603 gagatgaacccgtcaatagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 44084702  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    || |||||| | ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  44084703 tgaacttttggattgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgcc 44084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 771165 - 771005
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 115  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  771165 agatgaacccgtcaataatgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 771066  T
Q  116 ggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
    || ||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||||    
T  771065 gggctttttggttgggtctaatgtgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45418750 - 45418583
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  45418750 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45418651  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| |||||  | ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  45418650 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 2286026 - 2285846
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |    
T  2286026 atgaacacgtcaatagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatag 2285927  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||||||||||||  |||||||||||||||||||||||||| || | | ||||| ||| | ||||||| |||||||||||||    
T  2285926 actttttggttggatttaatgtgcaaaaattatcgatcgaacctgaatgaccgtccgagatcgccatccggtagaaccgcc 2285846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8147518 - 8147351
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaatttt-cagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  8147518 agatgaacccgtcaatagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaa 8147419  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | |||||||  |||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8147418 ttgacttttgagttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 8147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 12756837 - 12756985
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  12756837 gagatgaacccgtcaatagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaa 12756936  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    | | ||||| ||||| || ||||| |||||||||||||||||| |||||    
T  12756937 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgaacccgg 12756985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 8059336 - 8059498
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||| |||||| |||||||| |||| |||||||||||||||||||| ||||||||| |    
T  8059336 atgaacccgtcaattgtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattg 8059435  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 180  Q
     ||||| |||||| | ||||||||||||||||||||| ||||| || ||| || |||||||||    
T  8059436 gcttttgggttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcg 8059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 26162702 - 26162847
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||| ||||||||||||   ||| ||||||||||| || ||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  26162702 gagatgaacccgtcaataatgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaa 26162798  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    |||  |||| |||||| ||||||||| ||||||||||||  ||||||||    
T  26162799 tgggtttttgggttgaatttaatgtgtaaaaattatcgaaggagcccgg 26162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 26238065 - 26237957
Alignment:
Q  74 ttttcagatt-gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcc 172  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||  | |||| |||||||| |||||||||||||||| ||||||||    
T  26238065 ttttcagatttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaa-tatcgatcgagcccgggcgaccgcc 26237967  T
Q  173 cggggtcgcc 182  Q
    ||||||||||    
T  26237966 cggggtcgcc 26237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 4555250 - 4555354
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||| ||||||| ||||||||||||  ||||||| |||||||||||||| |||||||| |  ||||| ||||| |||| ||||||||||||||||||    
T  4555250 cctatttacgtgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T
Q  154 tcgag 158  Q
    |||||    
T  4555350 tcgag 4555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 7072589 - 7072710
Alignment:
Q  56 cctatttgcgtgtgacaattttcaga--ttgcccaaatttttctttttgtaaatgtg--ttaatggactttttggttgagtttaatgtgcaaaaattatc 151  Q
    ||||||| |||| || ||||||||||  ||| ||||  |||||||||| ||| ||||  ||||||| ||||| |||||||||||||||  ||||||||||    
T  7072589 cctatttacgtgcgagaattttcagaatttgtccaatattttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatc 7072688  T
Q  152 gatcgagcccggacgaccgccc 173  Q
    |||||||||||| |||||||||    
T  7072689 gatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 34906024 - 34905969
Alignment:
Q  107 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccg 162  Q
    ||||||||||| ||||| ||||  | ||||||||||||||||||||||||||||||    
T  34906024 tgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 26238110 - 26238080
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataa 45  Q
    |||||||||||||||||||||||||||||||    
T  26238110 gagatgaacccgtcaatagtgtgctaaataa 26238080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 4e-76; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 34948761 - 34948941
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34948761 atgaacccgtcaatagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 34948860  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  34948861 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcc 34948941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 13837985 - 13837805
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  13837985 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgt 13837886  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| |||||| ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||    
T  13837885 gcttttgggttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcc 13837805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 398784 - 398601
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  398784 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 398685  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  398684 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 28996897 - 28996730
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  28996897 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 28996798  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | ||||||| ||||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  28996797 ttgacttttaggttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgcc 28996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 18339273 - 18339106
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  18339273 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 18339174  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| | ||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  18339173 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 29743450 - 29743289
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| || ||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  29743450 gagatgaatccggcactagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaa 29743351  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
    || |||||||||||| || ||||||||||||||||||||| |||||||| | ||||||||||    
T  29743350 tgaactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccggg 29743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 33229336 - 33229484
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| ||| ||||||||||||||||||||| || |||| ||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  33229336 gagatgaatccggcaatagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaa 33229435  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||||||||| ||||| || |||||| ||||||| |||||||||||||||    
T  33229436 tggacttttgggttgggtctaatgtacaaaaatgatcgatcgagcccgg 33229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 31028435 - 31028531
Alignment:
Q  86 ccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||||| ||| |||||||||||||||||||||  ||||| |||||  | ||||||||||||||||||||||||| |||| | ||||| ||||||||||    
T  31028435 ccaaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgcc 31028531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 24697899 - 24698004
Alignment:
Q  97 tttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 196  Q
    ||||||||| ||||||||||| ||||| ||||| |  ||||||| ||||||||||||| |||||||| |||  | |||||||||||   ||||  |||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaaccg 24697998  T
Q  197 ccactg 202  Q
    ||||||    
T  24697999 ccactg 24698004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 13647053 - 13647017
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgcc 13647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 3050154 - 3050098
Alignment:
Q  107 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||||||||||| ||||| ||||| | | |||||||||||||||| ||| ||||||||    
T  3050154 tgtgttaatgggcttttcggttgcgctcaatgtgcaaaaattattgattgagcccgg 3050098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 18009 - 17826
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18009 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17910  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  17909 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcc 17826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 7433609 - 7433429
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7433609 atgaacccgtcaatagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgg 7433510  T
Q  118 actttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     ||||| |||||||| ||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7433509 gcttttgggttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcc 7433429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 42310941 - 42311124
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||| || |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42310941 gagatgaacccgtcaatagcgtactaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 42311040  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
     || ||||| |||||||| |||||||||||||||||||||||||||||| ||| || | |||||||||||||||||||||||||    
T  42311041 cgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgcc 42311124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 26144422 - 26144239
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  26144422 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 26144323  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  26144322 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 26144239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 32982056 - 32982236
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32982056 gagatgaatctgtcaatagagtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaa 32982155  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 195  Q
    ||| ||||| ||||| || ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  32982156 tgggcttttaggttgggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 3829150 - 3828988
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3829150 gagatgaacccgtcaatagtgtgctaaataaaattcca-gacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3829052  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggt 178  Q
    || |||||| ||||| ||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  3829051 tgaacttttgggttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggt 3828988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 321377 - 321536
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  321377 gagatgaacccgtcaataatgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaa 321476  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccg 174  Q
    ||||||||| |||||  | |||||  ||||||||||||||||||||||||||||||||||    
T  321477 tggacttttgggttggatctaatgcacaaaaattatcgatcgagcccggacgaccgcccg 321536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 17445479 - 17445313
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 115  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  17445479 agatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 17445380  T
Q  116 ggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
     ||||||| |||||  | |||||| |||||||||| |||| ||||||| |||||||  |||||||||    
T  17445379 tgacttttgggttggatctaatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgcc 17445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 35907719 - 35907552
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||  |||    
T  35907719 gagatgaactcgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaa 35907620  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| ||||| || |||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  35907619 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgcc 35907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 23313345 - 23313222
Alignment:
Q  76 ttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaa-aaattatcgatcgagcccggacgaccgcccg 174  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||| |||| ||| ||||||||||| | ||||||||    
T  23313345 ttcagattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccg 23313246  T
Q  175 gggtcgccatacggtagaaccgcc 198  Q
     | |||||||||||||||||||||    
T  23313245 agatcgccatacggtagaaccgcc 23313222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 198
Target Start/End: Original strand, 41972314 - 41972457
Alignment:
Q  56 cctatttgcgtgtgacaattttcagattgc--ccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||||||||||| ||||||||||||    |||||||||||||||||||| ||||||||| | ||||| |||||  | ||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  154 tcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||||||| || |||||||||||||||||   ||||| ||||||||    
T  41972414 tcgagccagg-cgaccgcccggggtcgctggacggtggaaccgcc 41972457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 33489815 - 33489687
Alignment:
Q  56 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 153  Q
    ||||||||||||||| ||||||||||||  || |||||||||||||| |||| ||||||||||| ||||| | |||||| |||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  154 tcgagcccggacgaccgcccggggtcgcc 182  Q
     | | |||| ||||||| |||||||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgcc 33489687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 33489873 - 33489839
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  33489873 gagatgaacccgtcaatagtgtgctaaataaaatt 33489839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 41972256 - 41972290
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  41972256 gagatgaacccgtcaatagtgtgctaaataaaatt 41972290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 35951464 - 35951497
Alignment:
Q  134 taatgtgcaaaaattatcgatcgagcccggacga 167  Q
    |||||| |||||||||||||||||||||||||||    
T  35951464 taatgtacaaaaattatcgatcgagcccggacga 35951497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 44352614 - 44352650
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgcc 44352650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 480457 - 480640
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  480457 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 480556  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  480557 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 480640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 689 - 506
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  689 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 590  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 198  Q
    ||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||||    
T  589 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcc 506  T

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Target: scaffold0502 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 5397 - 5230
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  5397 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 5298  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    | | ||||| | ||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  5297 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

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Target: scaffold0041 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 53092 - 52941
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  53092 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 52993  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    | | ||||| |||| | | |||||||||||||||||||||||||||||||||    
T  52992 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccggacg 52941  T

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Target: scaffold0154 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 31647 - 31480
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 114  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  31647 gagatgaacctgtcaatagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaa 31548  T
Q  115 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 182  Q
    ||| ||||| ||||| || || ||||||||||||||||||||||||||| |||||| | |||||||||    
T  31547 tgggcttttgggttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgcc 31480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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