View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_low_103 (Length: 302)

Name: NF18178_low_103
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_low_103
NF18178_low_103
[»] chr7 (39 HSPs)
chr7 (1-288)||(5774959-5775246)
chr7 (95-210)||(35132778-35132892)
chr7 (95-189)||(34899756-34899850)
chr7 (95-174)||(22742801-22742879)
chr7 (128-189)||(8013647-8013708)
chr7 (97-189)||(30756970-30757062)
chr7 (8-75)||(41553492-41553559)
chr7 (8-75)||(41553837-41553904)
chr7 (8-75)||(41554182-41554249)
chr7 (16-210)||(1749217-1749405)
chr7 (95-189)||(19404904-19404997)
chr7 (99-189)||(37837612-37837701)
chr7 (1-72)||(24069445-24069516)
chr7 (98-188)||(9450289-9450379)
chr7 (16-160)||(48930657-48930794)
chr7 (6-75)||(3224466-3224535)
chr7 (95-188)||(13797081-13797173)
chr7 (132-189)||(19296726-19296782)
chr7 (96-189)||(48316962-48317055)
chr7 (95-178)||(5078544-5078625)
chr7 (11-75)||(28476189-28476253)
chr7 (95-178)||(39171740-39171824)
chr7 (95-174)||(24350993-24351071)
chr7 (1-59)||(969498-969556)
chr7 (1-75)||(27997057-27997131)
chr7 (96-174)||(35665282-35665360)
chr7 (18-75)||(24350909-24350966)
chr7 (97-189)||(25255086-25255176)
chr7 (132-189)||(42978456-42978513)
chr7 (99-143)||(3394365-3394409)
chr7 (9-75)||(8001605-8001668)
chr7 (9-75)||(12141367-12141430)
chr7 (31-75)||(19296839-19296883)
chr7 (31-75)||(30756897-30756941)
chr7 (31-75)||(34899685-34899729)
chr7 (95-178)||(40993040-40993124)
chr7 (31-75)||(42978579-42978623)
chr7 (95-174)||(47590176-47590253)
chr7 (95-200)||(48061259-48061365)
[»] chr1 (36 HSPs)
chr1 (102-230)||(34413247-34413376)
chr1 (95-202)||(45415395-45415502)
chr1 (95-210)||(49626738-49626852)
chr1 (95-189)||(31984029-31984123)
chr1 (95-189)||(1742130-1742223)
chr1 (95-200)||(18939160-18939263)
chr1 (95-188)||(7337812-7337905)
chr1 (104-214)||(34528543-34528650)
chr1 (95-187)||(15435022-15435113)
chr1 (95-185)||(8212059-8212149)
chr1 (103-188)||(45789415-45789498)
chr1 (1-75)||(47132870-47132944)
chr1 (95-178)||(23291792-23291874)
chr1 (95-189)||(940214-940307)
chr1 (128-189)||(7836949-7837009)
chr1 (95-188)||(5983686-5983780)
chr1 (95-143)||(24597472-24597520)
chr1 (7-71)||(41994398-41994462)
chr1 (13-72)||(32679158-32679217)
chr1 (95-169)||(36775866-36775938)
chr1 (98-175)||(568936-569011)
chr1 (31-73)||(10776539-10776581)
chr1 (139-189)||(10776653-10776703)
chr1 (95-200)||(14872477-14872583)
chr1 (95-189)||(34878421-34878514)
chr1 (95-173)||(48750055-48750131)
chr1 (18-75)||(16161801-16161858)
chr1 (9-75)||(1742251-1742314)
chr1 (31-75)||(8211988-8212032)
chr1 (132-176)||(11462635-11462678)
chr1 (19-71)||(12635141-12635193)
chr1 (99-210)||(31692618-31692727)
chr1 (9-75)||(35484450-35484513)
chr1 (7-75)||(39724949-39725017)
chr1 (1-73)||(43412343-43412415)
chr1 (95-143)||(44543165-44543213)
[»] chr2 (41 HSPs)
chr2 (11-210)||(10237282-10237477)
chr2 (95-213)||(32448772-32448888)
chr2 (95-189)||(1415421-1415514)
chr2 (95-189)||(4778609-4778703)
chr2 (103-200)||(18763313-18763409)
chr2 (103-189)||(7646328-7646415)
chr2 (1-75)||(29574680-29574754)
chr2 (95-200)||(43397270-43397373)
chr2 (96-200)||(30400188-30400293)
chr2 (95-174)||(37994145-37994223)
chr2 (95-174)||(38445037-38445116)
chr2 (95-189)||(12648074-12648167)
chr2 (95-176)||(31788325-31788406)
chr2 (9-75)||(19062412-19062475)
chr2 (95-207)||(41694453-41694563)
chr2 (95-174)||(3308810-3308888)
chr2 (95-178)||(4098970-4099053)
chr2 (95-174)||(9169407-9169486)
chr2 (1-72)||(12647972-12648043)
chr2 (95-210)||(14955358-14955472)
chr2 (95-210)||(29574783-29574897)
chr2 (95-189)||(11985380-11985473)
chr2 (95-189)||(19062502-19062595)
chr2 (1-75)||(37994253-37994327)
chr2 (109-178)||(27097569-27097637)
chr2 (31-75)||(38445143-38445187)
chr2 (28-75)||(27097482-27097529)
chr2 (36-75)||(29173803-29173842)
chr2 (95-189)||(4041744-4041837)
chr2 (7-73)||(6358931-6358997)
chr2 (95-189)||(7448104-7448197)
chr2 (11-75)||(7677935-7677996)
chr2 (139-189)||(7678071-7678121)
chr2 (104-174)||(19029066-19029135)
chr2 (1-43)||(22538344-22538386)
chr2 (95-189)||(36943273-36943367)
chr2 (9-73)||(37876666-37876727)
chr2 (96-175)||(1421542-1421624)
chr2 (7-75)||(34128742-34128810)
chr2 (145-189)||(35220184-35220228)
chr2 (31-75)||(36943200-36943244)
[»] chr3 (48 HSPs)
chr3 (95-189)||(40556557-40556651)
chr3 (97-189)||(47042203-47042295)
chr3 (99-210)||(29239164-29239273)
chr3 (98-189)||(33579714-33579804)
chr3 (95-235)||(50194433-50194573)
chr3 (96-230)||(7546414-7546550)
chr3 (95-210)||(8914529-8914644)
chr3 (95-189)||(20465119-20465210)
chr3 (95-210)||(21289970-21290083)
chr3 (95-178)||(29921910-29921992)
chr3 (95-178)||(29971063-29971145)
chr3 (95-209)||(629055-629169)
chr3 (95-189)||(10232916-10233010)
chr3 (95-189)||(36461580-36461674)
chr3 (95-189)||(47895997-47896091)
chr3 (95-185)||(51303789-51303877)
chr3 (7-72)||(29239309-29239374)
chr3 (7-75)||(12947331-12947399)
chr3 (95-178)||(6954845-6954928)
chr3 (95-189)||(9797678-9797773)
chr3 (99-174)||(22290798-22290873)
chr3 (9-75)||(40487291-40487355)
chr3 (95-174)||(52923266-52923344)
chr3 (7-73)||(25842641-25842707)
chr3 (1-75)||(53807908-53807982)
chr3 (95-189)||(54148834-54148928)
chr3 (7-56)||(41818194-41818243)
chr3 (95-175)||(9998327-9998407)
chr3 (9-75)||(36461490-36461553)
chr3 (1-75)||(43488641-43488712)
chr3 (95-175)||(43488739-43488819)
chr3 (16-75)||(7546573-7546632)
chr3 (95-174)||(53508082-53508160)
chr3 (95-173)||(10108098-10108176)
chr3 (9-75)||(25461060-25461126)
chr3 (1-75)||(35175367-35175441)
chr3 (95-189)||(45568593-45568687)
chr3 (18-59)||(42460725-42460766)
chr3 (132-189)||(48650921-48650978)
chr3 (7-75)||(3606739-3606807)
chr3 (31-75)||(9998433-9998477)
chr3 (31-75)||(10108202-10108246)
chr3 (31-75)||(10233036-10233080)
chr3 (95-174)||(29249105-29249182)
chr3 (102-174)||(37040632-37040704)
chr3 (31-75)||(40556678-40556722)
chr3 (9-75)||(45568504-45568567)
chr3 (95-143)||(52116160-52116208)
[»] chr6 (27 HSPs)
chr6 (99-189)||(30894483-30894573)
chr6 (95-189)||(12170342-12170436)
chr6 (95-174)||(31296671-31296750)
chr6 (1-67)||(31296793-31296859)
chr6 (95-189)||(33053317-33053411)
chr6 (96-185)||(606055-606144)
chr6 (95-187)||(34018409-34018501)
chr6 (95-174)||(14801069-14801147)
chr6 (1-52)||(30140576-30140627)
chr6 (132-189)||(29320049-29320105)
chr6 (99-183)||(34222649-34222731)
chr6 (11-75)||(8102687-8102751)
chr6 (31-75)||(13546741-13546785)
chr6 (95-210)||(14801645-14801761)
chr6 (95-175)||(22571351-22571429)
chr6 (95-189)||(3913723-3913817)
chr6 (104-185)||(20220760-20220839)
chr6 (104-185)||(22114744-22114823)
chr6 (9-73)||(29319937-29319998)
chr6 (95-189)||(32191881-32191975)
chr6 (38-75)||(127638-127675)
chr6 (18-75)||(1523369-1523426)
chr6 (95-174)||(68150-68229)
chr6 (7-75)||(7976234-7976302)
chr6 (95-174)||(8102580-8102660)
chr6 (8-72)||(30493500-30493564)
chr6 (31-75)||(33053246-33053290)
[»] chr4 (51 HSPs)
chr4 (1-75)||(51888262-51888336)
chr4 (97-189)||(9643244-9643338)
chr4 (95-210)||(51888366-51888480)
chr4 (96-206)||(36161563-36161670)
chr4 (95-189)||(2520643-2520737)
chr4 (95-189)||(4142904-4142997)
chr4 (1-75)||(22300833-22300907)
chr4 (95-200)||(24099219-24099325)
chr4 (95-189)||(32766380-32766474)
chr4 (1-71)||(37683878-37683948)
chr4 (95-189)||(43510065-43510159)
chr4 (95-189)||(53810894-53810988)
chr4 (16-174)||(27651829-27651983)
chr4 (16-210)||(36194558-36194748)
chr4 (128-188)||(21225358-21225417)
chr4 (95-174)||(18935668-18935745)
chr4 (95-178)||(35348183-35348265)
chr4 (95-210)||(47320551-47320665)
chr4 (1-75)||(52944295-52944369)
chr4 (97-166)||(9634563-9634632)
chr4 (95-235)||(22300664-22300804)
chr4 (95-189)||(5119204-5119299)
chr4 (95-175)||(9713788-9713867)
chr4 (95-175)||(21686390-21686470)
chr4 (95-210)||(22038950-22039062)
chr4 (1-75)||(26633722-26633793)
chr4 (28-75)||(19853587-19853634)
chr4 (95-174)||(19853661-19853740)
chr4 (95-174)||(22611064-22611143)
chr4 (1-72)||(28857389-28857460)
chr4 (95-175)||(56040793-56040874)
chr4 (100-178)||(9178234-9178312)
chr4 (1-75)||(9643372-9643446)
chr4 (138-188)||(21231628-21231678)
chr4 (6-56)||(43853445-43853495)
chr4 (95-189)||(45418392-45418486)
chr4 (6-72)||(52934000-52934066)
chr4 (100-174)||(52944193-52944266)
chr4 (95-200)||(7009123-7009226)
chr4 (100-200)||(9165196-9165297)
chr4 (95-189)||(22558613-22558708)
chr4 (95-159)||(33920949-33921011)
chr4 (38-75)||(35395758-35395795)
chr4 (95-155)||(1621647-1621707)
chr4 (31-75)||(4142833-4142877)
chr4 (1-75)||(12199744-12199815)
chr4 (31-75)||(22611170-22611214)
chr4 (7-75)||(33332628-33332696)
chr4 (1-75)||(33921038-33921109)
chr4 (31-75)||(35348294-35348338)
chr4 (145-189)||(48257648-48257692)
[»] chr8 (38 HSPs)
chr8 (95-235)||(15344107-15344247)
chr8 (95-235)||(15433172-15433312)
chr8 (95-235)||(15524476-15524616)
chr8 (103-210)||(18890861-18890967)
chr8 (1-75)||(8443560-8443634)
chr8 (103-189)||(37971140-37971226)
chr8 (95-189)||(20559893-20559985)
chr8 (95-189)||(20571455-20571547)
chr8 (97-189)||(1239553-1239644)
chr8 (95-210)||(8826035-8826151)
chr8 (95-171)||(14585565-14585641)
chr8 (98-189)||(31013721-31013812)
chr8 (1-75)||(1239445-1239519)
chr8 (1-75)||(8826178-8826252)
chr8 (96-189)||(14545050-14545144)
chr8 (95-189)||(28897559-28897653)
chr8 (1-75)||(34609799-34609873)
chr8 (95-175)||(5046613-5046691)
chr8 (1-75)||(3673410-3673481)
chr8 (104-200)||(25191223-25191318)
chr8 (1-75)||(28086862-28086933)
chr8 (1-57)||(29617323-29617379)
chr8 (8-75)||(5333395-5333462)
chr8 (95-174)||(24099410-24099488)
chr8 (103-189)||(20553401-20553486)
chr8 (1-75)||(24099304-24099378)
chr8 (95-189)||(27110611-27110705)
chr8 (95-189)||(29937963-29938056)
chr8 (1-55)||(33342448-33342502)
chr8 (95-136)||(6831490-6831531)
chr8 (95-175)||(3240238-3240318)
chr8 (145-189)||(7677477-7677521)
chr8 (95-174)||(7883387-7883467)
chr8 (98-142)||(8443671-8443715)
chr8 (31-75)||(20553317-20553361)
chr8 (95-202)||(37663221-37663329)
chr8 (11-75)||(39657416-39657480)
chr8 (95-175)||(40211452-40211532)
[»] chr5 (31 HSPs)
chr5 (1-65)||(19120886-19120950)
chr5 (1-58)||(10332599-10332656)
chr5 (95-210)||(2979462-2979576)
chr5 (95-210)||(39567120-39567234)
chr5 (95-189)||(6012287-6012381)
chr5 (99-163)||(31314631-31314692)
chr5 (95-189)||(38597643-38597736)
chr5 (95-200)||(13007063-13007168)
chr5 (95-164)||(19103623-19103691)
chr5 (95-200)||(26878228-26878332)
chr5 (99-144)||(31364395-31364440)
chr5 (95-188)||(34945268-34945361)
chr5 (95-178)||(9113874-9113957)
chr5 (16-174)||(14211093-14211245)
chr5 (95-189)||(38007203-38007295)
chr5 (132-189)||(31391943-31392000)
chr5 (1-75)||(31391804-31391875)
chr5 (9-75)||(38597763-38597826)
chr5 (1-56)||(8088262-8088317)
chr5 (95-174)||(8096647-8096725)
chr5 (5-56)||(19349679-19349730)
chr5 (6-67)||(37986169-37986227)
chr5 (1-75)||(35921047-35921121)
chr5 (1-55)||(42886484-42886538)
chr5 (96-189)||(7036073-7036166)
chr5 (3-72)||(26510696-26510765)
chr5 (9-75)||(11073959-11074022)
chr5 (31-75)||(13007195-13007239)
chr5 (16-72)||(28540976-28541032)
chr5 (95-143)||(28541062-28541110)
chr5 (1-65)||(38110999-38111063)
[»] scaffold0888 (1 HSPs)
scaffold0888 (95-210)||(1824-1938)
[»] scaffold0445 (2 HSPs)
scaffold0445 (95-200)||(1179-1283)
scaffold0445 (1-72)||(1314-1382)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-235)||(58229-58369)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-75)||(5994-6068)
[»] scaffold0884 (1 HSPs)
scaffold0884 (132-189)||(2159-2215)
[»] scaffold0017 (2 HSPs)
scaffold0017 (95-202)||(32897-33004)
scaffold0017 (9-75)||(32806-32869)
[»] scaffold0603 (1 HSPs)
scaffold0603 (95-188)||(7564-7655)
[»] scaffold0026 (1 HSPs)
scaffold0026 (95-189)||(72013-72107)
[»] scaffold0127 (1 HSPs)
scaffold0127 (106-189)||(15338-15420)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-75)||(93070-93139)
[»] scaffold0087 (1 HSPs)
scaffold0087 (145-189)||(25528-25572)


Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 5775246 - 5774959
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||    
T  5775246 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgccgcactcagacgacgacgaaatcatgaaaaaa---cttgat 5775150  T
Q  101 atatgtgaaaatcacttatttgtatcaaaagaaagggga-aaaatagatggagaggggtgattctagatcaaaaaa--tgatataaaaccacatcttctc 197  Q
    ||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| | ||||||  ||| |||||| |||||||||||    
T  5775149 atatgtggaaatcacttatttatatcaaaagaaaggggggaaaatagatggagaggggtgattctaggtaaaaaaaaatgacataaaatcacatcttctc 5775050  T
Q  198 gataagtgaaagaaaaaagaacttggagagaagttggaatattttgaatgaggtggagccgttgaaatcatatcatataatgacaataatg 288  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5775049 tataagtgaaagaaaaaagaacttggagagaagttggaatattttgaatgaggtggagccgttgaaatcatatcatataatgacaataatg 5774959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 35132892 - 35132778
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| ||||||||||||||||||||  || ||||||||||||||||| ||||| |||||||||||||||| ||||||| |||  ||||| |||  ||     
T  35132892 cttgatgtatgtgaaaatcacttatttagattaaaagaaaggggaaaaa-agatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccctc 35132794  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  35132793 ctcgatgagtgaaaga 35132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 34899756 - 34899850
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  34899756 cttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 34899850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 22742879 - 22742801
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||||||||||||  ||  |||||||||||||||| ||||| |||||||||||||||||| |||||    
T  22742879 cttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaa-agatgcagaggggtgattctagattaaaaa 22742801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 8013647 - 8013708
Alignment:
Q  128 aaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||| ||||| |||||||||||||||| |||||||||||| |||||||||    
T  8013647 aaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgatctaaaaccac 8013708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 30756970 - 30757062
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| |||||||||||||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| ||||||||| |  |||||||||    
T  30756970 tgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccac 30757062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 41553492 - 41553559
Alignment:
Q  8 aacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||||||||||| | | || ||||||| ||||||||||||| ||||||||| ||||||    
T  41553492 aacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacga 41553559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 41553837 - 41553904
Alignment:
Q  8 aacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||||||||||| | | || ||||||| ||||||||||||| ||||||||| ||||||    
T  41553837 aacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacga 41553904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 41554182 - 41554249
Alignment:
Q  8 aacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||||||||||| | | || ||||||| ||||||||||||| ||||||||| ||||||    
T  41554182 aacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacga 41554249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 1749217 - 1749405
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaaatcac 115  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||  |||||   | ||||||||||||| |         |||||| ||||||||||||||    
T  1749217 gcgaaatcaaacaatgccgcacaagacgacgaacaacacaacgtcgcact---aagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcac 1749313  T
Q  116 ttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgataagtgaaaga 210  Q
    ||||||  ||  ||||||||||  |||| ||||| ||  |||||||||||| ||||||| |||  ||||| |||  || |||||| |||||||||    
T  1749314 ttatttagattgaaagaaaggg--aaaaaagatgaag-cgggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaaga 1749405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 19404904 - 19404997
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||| |||||||||| |||||||||  ||  ||||||| || ||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  19404904 cttgatttatgtgaaaaccacttatttagattgaaagaaaaggaaaaaa-agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 19404997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 37837612 - 37837701
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||| ||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  37837612 atatatgtgtaaaccacttatttagattgaaagaaaagggaaaaa-agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 37837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24069445 - 24069516
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||| ||||||| |||| |||||||| || |||||| ||||| | |||||||||||||| ||||||||||||    
T  24069445 acaccgcaacaatacgccaaatcaaaaaacgccgcacaagacaacgaacaacacaacgccgcactcagacga 24069516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 9450289 - 9450379
Alignment:
Q  98 gatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    |||| |||||||||||||||||||  ||  ||||||| ||| |||  ||||| ||| |||||||||||| |||||||||||  ||||||||    
T  9450289 gatagatgtgaaaatcacttatttagattgaaagaaaaggggaaacaagatgtagatgggtgattctaggtcaaaaaatgacctaaaacca 9450379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 48930794 - 48930657
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaaatcac 115  Q
    ||||||||||| || |||||| ||||||| ||| |||||||||  ||||| |||||||||   |||||||         |||||| ||||||||||||||    
T  48930794 gcgaaatcaaacaacgccgcacaagacgacgaataacacaacgtcgcactaagacgacga---aatcatgaaaaaa---cttgatgtatgtgaaaatcac 48930701  T
Q  116 ttatttgtatcaaaagaaaggggaaaaatagatggagaggggtga 160  Q
    ||||||  ||  |||||||||||||||| ||||| ||||||||||    
T  48930700 ttatttagattgaaagaaaggggaaaaa-agatgtagaggggtga 48930657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 3224466 - 3224535
Alignment:
Q  6 gcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| ||| |||||||||||||| |||| ||||| | |||||||||||| | || ||||||||||||    
T  3224466 gcaacaaaacgtgaaatcaaataatgtcgcacaagactacgaacaacacaacacagccctcagacgacga 3224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 13797081 - 13797173
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||| |||| ||||||||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| | |||||||||  ||||||||    
T  13797081 cttgatagatgttaaaatcacttatttaaattgaaagaaaaggggaaaa-agatgtagaggggtgattctaggttaaaaaatgacctaaaacca 13797173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 19296782 - 19296726
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  19296782 aaaggggaaaaa-agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 19296726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 48316962 - 48317055
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||| ||||||||| |||||||||  ||  ||||||| |||  ||| ||||| |||||||||||||||| || ||||||||  |||||||||    
T  48316962 ttgatagatgtgaaaaccacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtccaaaaatgacctaaaaccac 48317055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 5078544 - 5078625
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    |||||||||||| ||||||||||||||  ||| ||| || || || ||  ||||| |||||||||||||||| |||||||||||    
T  5078544 cttgatatatgtaaaaatcacttatttagatcgaaataatggagagaa--agatgcagaggggtgattctaggtcaaaaaatga 5078625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 28476253 - 28476189
Alignment:
Q  11 aagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||| || |||||| ||||||| |||||||||||||  ||||| |||||||||    
T  28476253 aagatgcgaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacga 28476189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 39171740 - 39171824
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaata-gatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||| || |||||| |||||||||  ||| |||||||  ||||||| | |||| |||||||||||||||| |||||||||||    
T  39171740 cttgatagatatgaaaaccacttatttagatcgaaagaaaaaggaaaaaaaagatgtagaggggtgattctaggtcaaaaaatga 39171824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 24350993 - 24351071
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||||||||||||  ||  ||||||| ||||||||  |||| | |||||||||||||| |||||||    
T  24350993 cttgatgtatgtgaaaatcacttatttagattgaaagaaa-gggaaaaaaggatgcacaggggtgattctaggtcaaaaa 24351071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 969498 - 969556
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgc 59  Q
    |||| |||| ||||||| |||||||| || |||||| ||||||| ||||||||||||||    
T  969498 acaccgcaataagacgcaaaatcaaacaacgccgcaaaagacgacgaacaacacaacgc 969556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27997131 - 27997057
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||| || |||| ||| ||||  ||| |||| || ||||||||||| || |||||||||||||||    
T  27997131 acactgcaacaagatgcaaaataaaacaatgttgcacaagatgacgaacaacacaatgccgcactcagacgacga 27997057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 35665282 - 35665360
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||| |  |||||||||||||  ||| |||||||| | ||| | ||||| |||||||||||||||| |||||||    
T  35665282 ttgatatatttcgaaatcacttatttagatcgaaagaaagagaaaataaagatgcagaggggtgattctaggtcaaaaa 35665360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 24350909 - 24350966
Alignment:
Q  18 gaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||| || |||||| ||||||| |||||||||||||  ||||| |||||||||    
T  24350909 gaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacga 24350966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 25255176 - 25255086
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||| ||||||||  ||||||||  ||  ||||||||||||||||  |||| | |||||||||| ||| |||||||||||  |||||||||    
T  25255176 tgatatgtgtgaaaacaacttatttaaattgaaagaaaggggaaaaa--gatgcaaaggggtgattataggtcaaaaaatgacctaaaaccac 25255086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 42978513 - 42978456
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||| ||| ||||| |||| ||||||||||| |||||||||||  |||||||||    
T  42978513 aaaggggagaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccac 42978456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 3394409 - 3394365
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaa 143  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||    
T  3394409 atatacgtgaaaatcacttatttagatcgaaagaaaggggaaaaa 3394365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 8001605 - 8001668
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||   || |||||| ||||||| |||||||| ||||| ||||| |||||||||    
T  8001605 acaagacgcgaaatca---aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacga 8001668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 12141367 - 12141430
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||   ||||||||| |||||||  ||||||| ||||| ||||| |||||||||    
T  12141367 acaagacgcgaaatca---aatgccgcacaagacgacaaacaacaaaacgccgcacttagacgacga 12141430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 19296883 - 19296839
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  19296883 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 19296839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 30756897 - 30756941
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  30756897 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 30756941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 34899685 - 34899729
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  34899685 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 34899729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 40993124 - 40993040
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaagg-ggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| | ||||||| ||||| ||||| |||||| ||| |||||||||||    
T  40993124 cttgatagatgtgaaaaccacttatttagattgaaagaaaagtggaaaaaaagatgtagaggagtgattttaggtcaaaaaatga 40993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 42978623 - 42978579
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  42978623 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 42978579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 47590253 - 47590176
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||| |||||||||  ||  ||||||  |||||||  | ||| |||||||||||||||| |||||||    
T  47590253 cttgatatatgtgaaaaccacttatttagattgaaagaatagggaaaa--aaatgtagaggggtgattctagttcaaaaa 47590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 48061365 - 48061259
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaa--ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatc 192  Q
    ||||||| ||||||||| |||||||||  ||  |||||||  ||||||||| | ||| || ||||||||||||  |||||||||||  ||||||||| ||    
T  48061365 cttgatagatgtgaaaaccacttatttagattgaaagaaaaaggggaaaaa-atatgtagtggggtgattctaagtcaaaaaatgacctaaaaccacctc 48061267  T
Q  193 ttctcgat 200  Q
    | ||||||    
T  48061266 tcctcgat 48061259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 34413247 - 34413376
Alignment:
Q  102 tatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgata 201  Q
    ||||||||||||||||||||  ||  |||||||||||||||| ||||| |||||||||||||||||| ||||| |||  ||||| |||  || |||||||    
T  34413247 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaaagatgcagaggggtgattctagataaaaaattgacctaaaatcacccctactcgata 34413346  T
Q  202 agtgaaaga-aaaaagaacttggagagaag 230  Q
    ||||||||| ||||| ||||| ||||||||    
T  34413347 agtgaaagagaaaaaaaacttagagagaag 34413376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 45415502 - 45415395
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| ||||||||||||||||||||||||||||  |||||||||  ||     
T  45415502 cttgatagatgtgaaaaccacttatttaaattgaaagaaaaggggaaaaaagatgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctc 45415403  T
Q  195 ctcgataa 202  Q
    ||||||||    
T  45415402 ctcgataa 45415395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 49626852 - 49626738
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||  |||||||||||||||| ||||| |||||||||||| ||| ||||| |||||  |||||||||  ||     
T  49626852 cttgatatttgtgaaaatcacttatttagatagaaagaaaggggaaaaa-agatgcagaggggtgattttaggtcaaagaatgacctaaaaccacccctc 49626754  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  49626753 ctcgatgagtgaaaga 49626738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 31984123 - 31984029
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  ||| ||||||| |||||||| ||||| |||| |||| |||||| |||||||||||  |||||||||    
T  31984123 cttgatatatgtgaaaaccacttatttagatcgaaagaaaagggaaaaaaagatgtagagaggtgcttctaggtcaaaaaatgacctaaaaccac 31984029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 1742223 - 1742130
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  ||  ||||||| |||  ||| |||||||||||||||||||||| |||||||||||  |||||||||    
T  1742223 cttgatatatgtgaaaaccacttatttagattgaaagaaaagggggaaa-agatggagaggggtgattctaggtcaaaaaatgacctaaaaccac 1742130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 18939263 - 18939160
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||  ||||||||  ||  ||||||||||||||||  |||| |||| |||||||||||||||||||||||  ||||||||| |||     
T  18939263 cttgatatgtgtgaaaactacttatttaaattgaaagaaaggggaaaaa--gatgcagagaggtgattctagatcaaaaaatgacctaaaaccacctctc 18939166  T
Q  195 ctcgat 200  Q
    ||||||    
T  18939165 ctcgat 18939160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 7337812 - 7337905
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| | | |||| ||||| |||||||||||||||||||||||||||| ||| |||||    
T  7337812 cttgatagatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattctagatcaaaaaatgacatagaacca 7337905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 214
Target Start/End: Complemental strand, 34528650 - 34528543
Alignment:
Q  104 tgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttc-tcgataa 202  Q
    |||| |||||||||||||  ||| |||||||||| ||||   |||| |||||||||||||||| ||||||||||| |||||||||| || || ||||| |    
T  34528650 tgtggaaatcacttatttagatcgaaagaaagggaaaaa---gatgcagaggggtgattctaggtcaaaaaatgacataaaaccac-tcatcttcgatga 34528555  T
Q  203 gtgaaagaaaaa 214  Q
    ||||||||||||    
T  34528554 gtgaaagaaaaa 34528543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 15435022 - 15435113
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacc 187  Q
    |||||| |||||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||| |||||||||||||||||||||  |||||||    
T  15435022 cttgatttatgtgaaaaacacttatttagattgaaagaaaagggaaaaa-agatgtagagggttgattctagatcaaaaaatgacctaaaacc 15435113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 8212059 - 8212149
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaa 185  Q
    ||||||||||||||||| |||||||||  ||  ||||||| || ||||| ||||| |||| ||||||| ||||||||||||| || |||||    
T  8212059 cttgatatatgtgaaaaccacttatttagatttaaagaaaaggaaaaaaaagatgtagagaggtgattgtagatcaaaaaataatctaaaa 8212149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 45789498 - 45789415
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||||| |||||||||  ||  ||||||||||||||||  |||| |||||||||||||||| |||||||||||  ||||||||    
T  45789498 atgtgaaaaccacttatttaaattgaaagaaaggggaaaaa--gatgcagaggggtgattctaggtcaaaaaatgacctaaaacca 45789415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47132944 - 47132870
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||||||||| ||| || |||||| || |||| ||||||||||||||  ||||||||||||||    
T  47132944 acaccgcaacaagacgcgaaattaaacaacgccgcacaaaacgacgaacaacacaacgccccactcagacgacga 47132870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 23291792 - 23291874
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||||||||||||| |||||||||  ||  ||||||| | |||||| |||||  ||||||||||||||| |||||||||||    
T  23291792 cttgatatatgtgaaaaccacttatttagattgaaagaaaagagaaaaa-agatgtcgaggggtgattctaggtcaaaaaatga 23291874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 940307 - 940214
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  || |||||||| ||| |||  ||||| ||| |||||||||||| | |||||||||  |||||||||    
T  940307 cttgatatatgtgaaaaccacttatttaaattaaaagaaaaggggaaacaagatgcagatgggtgattctaggt-aaaaaatgacttaaaaccac 940214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 7836949 - 7837009
Alignment:
Q  128 aaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||| |||||  |||||||||||||||||||||||||||  |||||||||    
T  7836949 aaagaaaagggaaaaa-agatgtcgaggggtgattctagatcaaaaaatgacctaaaaccac 7837009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 5983780 - 5983686
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaa--ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||| ||||||||| || ||||||  ||| |||||||  ||||||||| ||||| ||| | |||||||||| |||||||||||| ||||||||    
T  5983780 cttgatagatgtgaaaaccatttatttagatcgaaagaaaaaggggaaaaa-agatgtagacgagtgattctaggtcaaaaaatgatctaaaacca 5983686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 24597472 - 24597520
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaa 143  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||    
T  24597472 cttgatatatgtgaaaatcatttatttatattaaaagaaagggaaaaaa 24597520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 41994462 - 41994398
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacg 71  Q
    ||||||||  |||||||||| || || ||| |||||||||||||||||||||| ||| |||||||    
T  41994462 caacaagatccgaaatcaaacaacgctgcacaagacgatgaacaacacaacgccgcattcagacg 41994398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 32679158 - 32679217
Alignment:
Q  13 gacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    ||||||||||||||  | |||||| |||| || |||||||||||||| ||||||||||||    
T  32679158 gacgcgaaatcaaactacgccgcacaagatgacgaacaacacaacgccgcactcagacga 32679217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 36775866 - 36775938
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatc 169  Q
    |||||| ||||||||||||| ||||||  ||  |||||||||| |||||  |||| |||||||||||||||||||    
T  36775866 cttgatgtatgtgaaaatcatttatttagattgaaagaaagggaaaaaa--gatgcagaggggtgattctagatc 36775938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 568936 - 569011
Alignment:
Q  98 gatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    |||||| |||||||||||||||||  ||  |||||||||||||||  ||||| ||||||| |||||||| | ||||||    
T  568936 gatatacgtgaaaatcacttatttagattgaaagaaaggggaaaa--agatgtagaggggggattctaggtaaaaaaa 569011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 10776539 - 10776581
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    |||||||||||||| |||||||||||||| ||||| |||||||    
T  10776539 gccgcataagacgacgaacaacacaacgccgcacttagacgac 10776581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 10776653 - 10776703
Alignment:
Q  139 aaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| ||||| ||| |||||||||||| |||||||||||| |||||||||    
T  10776653 aaaaaaagatgtagatgggtgattctaggtcaaaaaatgatctaaaaccac 10776703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 14872583 - 14872477
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaag-gggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatct 193  Q
    |||||||| ||| |||| |||||||||  ||  |||||||  |||||||| ||||| ||||| |||||||||  |||||||||||   ||||||||| ||    
T  14872583 cttgatatttgtaaaaaccacttatttacattgaaagaaaaagggaaaaaaagatgtagaggagtgattctaagtcaaaaaatgaccgaaaaccacacct 14872484  T
Q  194 tctcgat 200  Q
    |||||||    
T  14872483 tctcgat 14872477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 34878421 - 34878514
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||| |||||||| |||||||||  ||  |||||||  ||||||| ||||| ||| | |||||||||| |||||||||||  |||||||||    
T  34878421 cttgatatgtgtgaaaaccacttatttaaattgaaagaaaatggaaaaa-agatgtagatgagtgattctaggtcaaaaaatgacctaaaaccac 34878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 48750131 - 48750055
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaa 173  Q
    |||||| ||||||||||||||||||||  ||  |||||||||||||||| ||||| | ||| |||||||||| ||||||    
T  48750131 cttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaa-agatgca-aggagtgattctaggtcaaaa 48750055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 16161858 - 16161801
Alignment:
Q  18 gaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||| || |||||| ||||||| |||||||||||||  ||||| |||||||||    
T  16161858 gaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacga 16161801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1742314 - 1742251
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||    | |||| ||||||| |||||||||||||| ||||| |||||||||    
T  1742314 acaagacgcgaaatcaaac---gtcgcacaagacgacgaacaacacaacgccgcacttagacgacga 1742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 8211988 - 8212032
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| |||||||||||||||||||||| ||| | |||||||||    
T  8211988 gccgcacaagacgatgaacaacacaacgccgcatttagacgacga 8212032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 11462635 - 11462678
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaat 176  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||    
T  11462635 aaaggggaaaaa-agatgcagaggggtgattctaggtcaaaaaat 11462678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12635193 - 12635141
Alignment:
Q  19 aaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacg 71  Q
    |||||||| || |||||| ||||||| |||||||||||||| |||| ||||||    
T  12635193 aaatcaaacaacgccgcacaagacgacgaacaacacaacgccgcacacagacg 12635141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 31692618 - 31692727
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcg 198  Q
    |||| ||||||||||| ||| ||  ||| |||||||||  ||||| | ||| ||||||||||||| || |||||||||||  ||||| ||||  | ||||    
T  31692618 atatgtgtgaaaatcaattacttagatcgaaagaaagg--aaaaaaaaatgcagaggggtgattcaaggtcaaaaaatgacctaaaatcacacatcctcg 31692715  T
Q  199 ataagtgaaaga 210  Q
    || |||||||||    
T  31692716 atgagtgaaaga 31692727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 35484450 - 35484513
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||| ||||| |   |||| ||||||| |||||||||||||| ||||| |||||||||    
T  35484450 acaagacgcgaaagcaaatga---cgcacaagacgacgaacaacacaacgccgcacttagacgacga 35484513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 39725017 - 39724949
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| || ||||||||| |||| ||| ||||||| ||||||| ||| |||  ||||||||||||||    
T  39725017 caacaaggcgagaaatcaaacaatgtcgcgtaagacgttgaacaaaacatcgccacactcagacgacga 39724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43412415 - 43412343
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    |||||||||  |||| |||| |||||||| | |||| |||||||||||||||||| | |  ||||||||||||    
T  43412415 acactgcaattagacacgaactcaaataacgtcgcaaaagacgatgaacaacacagcacatcactcagacgac 43412343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 44543213 - 44543165
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaa 143  Q
    |||||||| ||||||||||||||||||  ||| |||||||||| |||||    
T  44543213 cttgatatttgtgaaaatcacttatttagatcgaaagaaagggaaaaaa 44543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 10237282 - 10237477
Alignment:
Q  11 aagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaa 110  Q
    |||| ||||||||||| || || ||| ||||||| |||||||||||||  ||||| |||||||||   ||||| |         |||||| |||||||||    
T  10237282 aagatgcgaaatcaaagaacgctgcacaagacgacgaacaacacaacgtcgcactaagacgacga---aatcacgaaagaaaaacttgatgtatgtgaaa 10237378  T
Q  111 atcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgataagtgaaaga 210  Q
    |||||||||||  ||  |||||||||||||||| ||||| |||||||||||||||| ||||||| |||  ||||| ||| ||| |||||| |||||||||    
T  10237379 atcacttatttagattgaaagaaaggggaaaaa-agatgtagaggggtgattctaggtcaaaaattgacctaaaatcacctctactcgatgagtgaaaga 10237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 32448772 - 32448888
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||  |||||||||||||||||  ||| |||||||||||||||  ||||| |||||||||||| ||| ||||| |||||  |||||||||  ||     
T  32448772 cttgatattggtgaaaatcacttatttagatcgaaagaaaggggaaaa--agatgcagaggggtgattttaggtcaaataatgacctaaaaccacccctc 32448869  T
Q  195 ctcgataagtgaaagaaaa 213  Q
    |||||| ||||||||||||    
T  32448870 ctcgatgagtgaaagaaaa 32448888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 1415514 - 1415421
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||| ||||||||||||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||||||||||||| |  |||||||||    
T  1415514 cttgatatgtgtgaaaatcacttatttaaattgaaagaaaagggaaaaa-agatgtagaggggtgattctagatcaaaaaataacctaaaaccac 1415421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 4778703 - 4778609
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  4778703 cttgatagatgtgaaaaccacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 4778609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 18763409 - 18763313
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgat 200  Q
    ||||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| ||| ||||||    
T  18763409 atgtgaaaaccacttatttagattgaaagaaaagggaaaaa-agatgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgat 18763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 7646415 - 7646328
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaa-ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||| |||||||||  ||| ||||||| ||||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  7646415 atgtgaaaaccacttatttagatcgaaagaaaaggggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 7646328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29574680 - 29574754
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||| | | ||||||||| ||||||||| ||||||| |||||||||||||| |||||| ||||||||    
T  29574680 acactgcaacaaaatgtgaaatcaaacaatgccgcacaagacgacgaacaacacaacgccgcactcggacgacga 29574754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 43397270 - 43397373
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||||||| |||||||||  ||  ||||||| ||||||||  |||| |||| ||||||||||| |||||||||||  |||||||||  |||    
T  43397270 cttgatatatgtgaaaaccacttatttagattgaaagaaaagggaaaaa--gatgtagagaggtgattctaggtcaaaaaatgacctaaaaccacccctt 43397367  T
Q  195 ctcgat 200  Q
    ||||||    
T  43397368 ctcgat 43397373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 30400188 - 30400293
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggg-gtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||||||||||| |||||||||  || ||||||||  | ||||| ||||| ||| || |||||| ||| |||||||||||| ||||||||| ||||    
T  30400188 ttgatatatgtgaaaaacacttatttagattaaaagaaaaagaaaaaaaagatgtagatggagtgattttaggtcaaaaaatgatctaaaaccacctctt 30400287  T
Q  195 ctcgat 200  Q
    ||||||    
T  30400288 ctcgat 30400293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 37994223 - 37994145
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||||||||||||  ||| |||||||||||||| | | ||| |||||||||||||||| |||||||    
T  37994223 cttgatctatgtgaaaatcacttatttaaatcgaaagaaaggggaaaca-aaatgcagaggggtgattctaggtcaaaaa 37994145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 38445116 - 38445037
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| ||||||||| |||  |||||||  || |||| ||||| ||||||||||||||||||||||||    
T  38445116 cttgatagatgtgaaaaccacttatttatattgaaagaaaaagggaaaaaagatgtagaggggtgattctagatcaaaaa 38445037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 12648074 - 12648167
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||| |||||||||||||  ||  ||||||| | |||||| |||||  ||||||||||||||| |||||||||||  |||||||||    
T  12648074 cttgatatatgtggaaatcacttatttagattgaaagaaaagagaaaaa-agatgtggaggggtgattctaggtcaaaaaatgacctaaaaccac 12648167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 31788406 - 31788325
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaat 176  Q
    ||||||| |||||||||||||||||||  ||  |||||||  || |||| ||||| |||||||||||||||| |||||||||    
T  31788406 cttgatagatgtgaaaatcacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattctaggtcaaaaaat 31788325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 19062412 - 19062475
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||| ||||||||||   |||||| ||||||| |||||||||||||||||||| |||||||||    
T  19062412 acaagacgtgaaatcaaat---gccgcacaagacgacgaacaacacaacgctgcacttagacgacga 19062475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 41694563 - 41694453
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||| |||||||| | ||||||||  |||||||| ||||||||||| ||||| |||  | ||||| || ||||||||||||  |||||| |||||||    
T  41694563 cttgataaatgtgaaact-acttatttagatcaaaagtaaggggaaaaa-agatgaagaatgatgattttaaatcaaaaaatgacctaaaactacatctt 41694466  T
Q  195 ctcgataagtgaa 207  Q
    |||||| ||||||    
T  41694465 ctcgatgagtgaa 41694453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 3308888 - 3308810
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||||||||||||  ||  ||| |||||||||||| ||||| | |||||||||||||| |||||||    
T  3308888 cttgatgtatgtgaaaatcacttatttagattgaaataaaggggaaaaa-agatgcaaaggggtgattctaggtcaaaaa 3308810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 4099053 - 4098970
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| ||| |||||||||||| |||||||||||    
T  4099053 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctaggtcaaaaaatga 4098970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 9169407 - 9169486
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| |||||||| | ||| |||||||||||||||| |||||||    
T  9169407 cttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaaaaaatgtagaggggtgattctaggtcaaaaa 9169486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12647972 - 12648043
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||| ||||||||||| ||||||||| || |||||| ||||||| |||||||||||| | ||||| ||||||    
T  12647972 acaccgcaacaagacgagaaatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacga 12648043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 14955472 - 14955358
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| |||||| |||||||||||||  ||  |||||||| ||||||| ||||| |||||| ||||||||| ||||||| |||  ||||| |||  ||     
T  14955472 cttgatgtatgtggaaatcacttatttagattgaaagaaagaggaaaaa-agatgcagagggatgattctaggtcaaaaattgacttaaaatcacccctc 14955374  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  14955373 ctcgatgagtgaaaga 14955358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 29574783 - 29574897
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||| |||||||||||||  ||  |||||||  |||||||  |||| | |||| ||||||||| |||||||||||| |||||||||  ||     
T  29574783 cttgatatatgtggaaatcacttatttagattgaaagaaaatggaaaaaaggatgcacaggg-tgattctaggtcaaaaaatgatctaaaaccacccctc 29574881  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||  |||||||||    
T  29574882 ctcgacgagtgaaaga 29574897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 11985380 - 11985473
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  ||  ||||||| ||| |||| || || |||||||||||||||| | |||||||||  |||||||||    
T  11985380 cttgatatatgtgaaaaccacttatttaaattgaaagaaaaggggaaaa-agttgtagaggggtgattctaggttaaaaaatgacttaaaaccac 11985473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 19062502 - 19062595
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||||||||  |||| |||||||||||||||| ||||||||| |  |||||||||    
T  19062502 cttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaag-gatgtagaggggtgattctagttcaaaaaataacctaaaaccac 19062595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37994327 - 37994253
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||| || |||||||| ||||||| | | || || |||||||||||||| |||||||||| ||||    
T  37994327 acactgcaacaagatgcaaaatcaaacaatgccgtacaggaagacgaacaacacaacgccgcactcagacaacga 37994253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 27097569 - 27097637
Alignment:
Q  109 aaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    |||||||||||||  ||||||||||| ||| |||| ||||| ||| |||||||||||| |||||||||||    
T  27097569 aaatcacttatttagatcaaaagaaaaggggaaaaaagatgtaga-gggtgattctaggtcaaaaaatga 27097637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 38445187 - 38445143
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||    
T  38445187 gccgcacaagacgacgaacaacacaacgctgcacttagacgacga 38445143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 27097482 - 27097529
Alignment:
Q  28 aatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||| ||||||| |||||||||||||| ||||| |||||||||    
T  27097482 aatgccgcacaagacgacgaacaacacaacgccgcacttagacgacga 27097529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 29173803 - 29173842
Alignment:
Q  36 ataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29173803 ataagacgatgaacaacacaacgccgcacttagacgacga 29173842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 4041744 - 4041837
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| |||||||| | ||| |||||||||||||||| |||||  |||||  ||||||||    
T  4041744 cttgatagatgtgaaaaccacttatttagattgaaagaaacgggaaaaaaa-atgtagaggggtgattctaggtcaaagtatgatccaaaaccac 4041837  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 6358931 - 6358997
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    |||||||| ||||||||||| || || ||| ||||||| |||||||||||||   ||||||||||||    
T  6358931 caacaagatgcgaaatcaaacaacgctgcacaagacgacgaacaacacaacgacacactcagacgac 6358997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 7448197 - 7448104
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| || ||||||  ||  ||||||| ||| |||| ||||| ||||||||||||||||  ||||||||||  |||||||||    
T  7448197 cttgatagatgtgaaaaccatttatttagattgaaagaaaaggggaaaa-agatgtagaggggtgattctaggacaaaaaatgacctaaaaccac 7448104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 7677935 - 7677996
Alignment:
Q  11 aagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  7677935 aagacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 7677996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 7678071 - 7678121
Alignment:
Q  139 aaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  7678071 aaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 7678121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 19029066 - 19029135
Alignment:
Q  104 tgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||||  ||| |||  |||||| |||| ||||||||| |||||||||||| |||||||    
T  19029066 tgtgaaaatcacttatttagatcgaaaagaaggggtaaaa-agatggagatgggtgattctaggtcaaaaa 19029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22538344 - 22538386
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacg 43  Q
    ||||||||||||||| | |||||||||||||||||| ||||||    
T  22538344 acactgcaacaagactcaaaatcaaataatgccgcacaagacg 22538386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 36943273 - 36943367
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||  ||||||||  ||  ||||||| | | |||| ||||| |||| ||||||||||| |||||||||||  |||||||||    
T  36943273 cttgatagatgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccac 36943367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 37876666 - 37876727
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    ||||||||||||||||   ||||||||| ||||||| |||||||| ||||| ||||| |||||||    
T  37876666 acaagacgcgaaatca---aatgccgcacaagacgacgaacaacaaaacgccgcacttagacgac 37876727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 1421624 - 1421542
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaagggg---aaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    |||||| ||||||||| |||||||||  ||  ||||||| |||   ||||| ||||| ||||||||||||||| |||||||||    
T  1421624 ttgatagatgtgaaaaccacttatttagattgaaagaaaagggggaaaaaaaagatgtagaggggtgattctatatcaaaaaa 1421542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 34128742 - 34128810
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||  ||||||| || | |||| ||||||| |||||||| ||| | |||||||||||||||    
T  34128742 caacaagacgcacaatcaaacaacgtcgcacaagacgacgaacaacataacaccgcactcagacgacga 34128810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 35220228 - 35220184
Alignment:
Q  145 agatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||    
T  35220228 agatggagaggggtgattctaggtcaaaaaataacctaaaaccac 35220184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 36943200 - 36943244
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  36943200 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 36943244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 40556651 - 40556557
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| || |||||| ||||||||| |||||||||||| |||||||| |||||  ||||||||||||||| |||||||||||  |||||||||    
T  40556651 cttgatagatatgaaaaccacttatttatatcaaaagaaaagggaaaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccac 40556557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 47042203 - 47042295
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||||||||||||  ||  ||||||| |||||||| ||||| |||||||||||| ||| | |||||||||  |||||||||    
T  47042203 tgatatatgtgaaaatcacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattataggttaaaaaatgacctaaaaccac 47042295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 29239273 - 29239164
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcg 198  Q
    |||||||||||||||| ||||||  ||| |||||||||  ||||| ||||| || |||||||||||||||||||||||||  ||||||||| | ||||||    
T  29239273 atatatgtgaaaatcatttatttagatctaaagaaaggaaaaaaaaagatgtag-ggggtgattctagatcaaaaaatgacctaaaaccacct-ttctcg 29239176  T
Q  199 ataagtgaaaga 210  Q
    | || |||||||    
T  29239175 acaaatgaaaga 29239164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 33579804 - 33579714
Alignment:
Q  98 gatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||||||||||  ||  |||||||  ||||||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  33579804 gatatatgtgaaaatcacttatttagattgaaagaaaatggaaaaa-agatgtagaggggtgattctaggtcaaaaaatgacttaaaaccac 33579714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 50194433 - 50194573
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||| |||||||||||||  ||  ||||| | ||||||||  |||| |||| ||||||| ||| |||||||||||| |||||||||  |||    
T  50194433 cttgatatatgtggaaatcacttatttagattgaaagagaagggaaaaag-gatgcagagaggtgattttaggtcaaaaaatgatctaaaaccactcctt 50194531  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaagttgga 235  Q
    |||||  ||||||||| ||  | ||||| |||||||||||||    
T  50194532 ctcgacgagtgaaagagaacgaaaacttagagagaagttgga 50194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 7546550 - 7546414
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaata-gatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||| ||||||||||||||||||||  ||  |||||| ||||||||| | |||| |||||||||||||||||||||||| |||  ||||| |||  ||     
T  7546550 ttgatgtatgtgaaaatcacttatttagattgaaagaagggggaaaaaaaagatgcagaggggtgattctagatcaaaaattgacctaaaatcacccctc 7546451  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaag 230  Q
    |||||| ||||| ||| ||| | ||||| ||||||||    
T  7546450 ctcgatgagtgagagagaaagaaaacttagagagaag 7546414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 8914644 - 8914529
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| |||||||||||| |||||||  || |||| || ||| ||||| ||||| |||||||| ||||||| ||||||| |||  ||||| |||  |||    
T  8914644 cttgatgtatgtgaaaatcccttattttaattaaaaaaaggggaaaaaaaagatgcagaggggttattctaggtcaaaaattgacctaaaatcacccctt 8914545  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  8914544 ctcgatgagtgaaaga 8914529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 20465119 - 20465210
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||| |||||||||||||| |||  ||| |||||||||||  ||| |||||||||||||||||  || |||||||| ||||||||||    
T  20465119 cttgatatatgttaaaatcacttatttatattgaaaaaaaggggaaaa--agagggagaggggtgattctatgtc-aaaaatgacataaaaccac 20465210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 21289970 - 21290083
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| ||||| ||||||||||||||| ||  |||||| ||||||||| ||||| |||||||||||||||| ||||||| |||  ||||| ||| |||     
T  21289970 cttgatgtatgttaaaatcacttatttggattgaaagaa-ggggaaaaa-agatgcagaggggtgattctaggtcaaaaattgacctaaaatcacctctc 21290067  T
Q  195 ctcgataagtgaaaga 210  Q
    ||| || |||||||||    
T  21290068 ctccatgagtgaaaga 21290083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 29921992 - 29921910
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||||||||| |||||||||||||  ||  |||||||||||||||| ||||||||||  |||||| ||| |||||||||||    
T  29921992 cttgatatatgtggaaatcacttatttagattgaaagaaaggggaaaaa-agatggagagaagtgattttagctcaaaaaatga 29921910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 29971145 - 29971063
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||||||||| |||||||||||||  ||  |||||||||||||||| ||||||||||  |||||| ||| |||||||||||    
T  29971145 cttgatatatgtggaaatcacttatttagattgaaagaaaggggaaaaa-agatggagagaagtgattttagctcaaaaaatga 29971063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 629055 - 629169
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||| |||||| ||| ||||| ||||| ||| || ||||| ||| ||||| |||||  |||||||||  ||     
T  629055 cttgatatttgtgaaaatcacttatttagatcgaaagaaggggaaaaaaaagatgcagaaggatgattttaggtcaaagaatgacctaaaaccacccctc 629154  T
Q  195 ctcgataagtgaaag 209  Q
    |||||| ||||||||    
T  629155 ctcgatgagtgaaag 629169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 10233010 - 10232916
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| | ||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  10233010 cttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 10232916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 36461580 - 36461674
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||||||||||||  ||  ||||||| ||| |||| ||||| |||||||||| | ||| |||||||||||  |||||||||    
T  36461580 cttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgaatataggtcaaaaaatgacctaaaaccac 36461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 47896091 - 47895997
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  ||  |||||||  |  |||| ||||| |||||||||||||||| |||||||||||| || ||||||    
T  47896091 cttgatatatgtgaaaaccacttatttagattgaaagaaaaagagaaaaaagatgtagaggggtgattctaggtcaaaaaatgatctataaccac 47895997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 51303789 - 51303877
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaa 185  Q
    |||||| ||||||||||||||||||||| ||  ||| |||||||||||| ||||| ||| |||||||||||| ||||||| ||| ||||||    
T  51303789 cttgatgtatgtgaaaatcacttatttggattgaaaaaaaggggaaaaa-agatgcaga-gggtgattctaggtcaaaaattgacataaaa 51303877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 29239374 - 29239309
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||||||||| ||||||||| |  |||||| ||||||| |||||||||||||| ||||||||||||    
T  29239374 caacaagacgtgaaatcaaacagcgccgcacaagacgacgaacaacacaacgccgcactcagacga 29239309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12947331 - 12947399
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||| ||||||||||| || |||||| ||||||| ||||||||||| || ||||||| |||||||    
T  12947331 caacaagatgcgaaatcaaacaacgccgcacaagacgacgaacaacacaaagccgcactcaaacgacga 12947399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 6954845 - 6954928
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||| ||||||||  |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||    
T  6954845 cttgatagatgtgaaacccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatga 6954928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 9797678 - 9797773
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaata-gatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| | |||||| | |||| |||||||||||||||| |||||||||||  |||||||||    
T  9797678 cttgatagatgtgaaaaccacttatttagattgaaagaaaagagaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 9797773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 22290873 - 22290798
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||||||||||||||||||||  || ||||||||| || |||| ||||| | || | |||||||||||||||||    
T  22290873 atatatgtgaaaatcacttatttagattaaaagaaagagggaaaaaagatgcaaagagatgattctagatcaaaaa 22290798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 40487355 - 40487291
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||  | |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  40487355 acaagacgcgaaatcaaa--acgccgcacaagacgacgaacaacacaacgccgcacttagacgacga 40487291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 52923266 - 52923344
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| |||||||    
T  52923266 cttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaa-agatgtagaggggtgattctaggtcaaaaa 52923344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 25842707 - 25842641
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    |||||||||| ||||||||| ||| ||||| |||| ||||||||||||||||  ||||||| |||||    
T  25842707 caacaagacgagaaatcaaacaataccgcagaagatgatgaacaacacaacgtcgcactcaaacgac 25842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53807908 - 53807982
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||| || |||||||| ||||||||| ||||||| ||||||||||| |  ||||| |||||||||    
T  53807908 acacagcaacaagatgccaaatcaaacaatgccgcagaagacgacgaacaacacaaggtcgcacttagacgacga 53807982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 54148928 - 54148834
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| | | |||| ||||| |||||||||||| ||| |||||||||||  |||||||||    
T  54148928 cttgatagatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattgtaggtcaaaaaatgacctaaaaccac 54148834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 41818243 - 41818194
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaa 56  Q
    |||||||||||||||||||| ||| ||||| ||||||| |||||||||||    
T  41818243 caacaagacgcgaaatcaaacaataccgcacaagacgacgaacaacacaa 41818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 9998407 - 9998327
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||| | ||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| ||||||||    
T  9998407 cttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaa 9998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 36461490 - 36461553
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  36461490 acaagacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 36461553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43488641 - 43488712
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||||||||||||||    |||||| ||||||| ||||||||||||||  |||| |||||||||    
T  43488641 acaccgcaacaagacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccacacttagacgacga 43488712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 43488739 - 43488819
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||| ||||||||| |||||||||  ||  |||||||  || |||| ||||| |||||||||||||||| ||||||||    
T  43488739 cttgatagatgtgaaaaccacttatttagattgaaagaaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaa 43488819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 7546632 - 7546573
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||| || |||||| ||||||| |||||||||||||  ||||| |||||||||    
T  7546632 gcgaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacga 7546573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 53508160 - 53508082
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||||||||||||| |||  |||||||  ||||||| ||| | ||| |||||||| ||| |||||||    
T  53508160 cttgatatatgtgaaaatcacttatttatattgaaagaaaaaggaaaaa-agacgcagatgggtgattttaggtcaaaaa 53508082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 10108176 - 10108098
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaa 173  Q
    ||||||| | ||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| ||||||    
T  10108176 cttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaa 10108098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 25461060 - 25461126
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| | |||||||| || | |||||||||||| |||||||| ||||| ||||||| |||||||    
T  25461060 acaagacacaaaatcaaacaacgtcgcataagacgacgaacaacataacgccgcactcaaacgacga 25461126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35175441 - 35175367
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||  ||||||||| || || ||| ||||||||||||||||||| |  | |||||||||||||    
T  35175441 acaccgcaacaagacatgaaatcaaacaacgctgcacaagacgatgaacaacacaatgtcgtactcagacgacga 35175367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 45568593 - 45568687
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||  ||||||||  ||  ||||||| ||| |||| ||||| ||| || | |||||||||||||||||||  |||||||||    
T  45568593 cttgatagatgtgaaaacaacttatttagattgaaagaaaaggggaaaaaagatgtagatggattattctagatcaaaaaatgacctaaaaccac 45568687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 42460766 - 42460725
Alignment:
Q  18 gaaatcaaataatgccgcataagacgatgaacaacacaacgc 59  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  42460766 gaaatcaaacaacgccgcacaagacgatgaacaacacaacgc 42460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 48650921 - 48650978
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||| |||||  ||||||||||| ||| |||||||||||  |||||||||    
T  48650921 aaaggggaaaaaaagatgtcgaggggtgattttaggtcaaaaaatgacctaaaaccac 48650978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 3606807 - 3606739
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||| || |||| | || ||| || ||||||| ||||||||||| || |||||||||||||||    
T  3606807 caacaagacgggatatcatacaacgccacacaagacgacgaacaacacaatgccgcactcagacgacga 3606739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 9998477 - 9998433
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  9998477 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 9998433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10108246 - 10108202
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  10108246 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 10108202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10233080 - 10233036
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  10233080 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 10233036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 29249182 - 29249105
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||| |||||||||  ||| || ||||| ||||||  ||||| ||||  |||||||||| |||||||    
T  29249182 cttgatatatgtgaaaaacacttatttagatcgaacgaaagaggaaaa--agatgaagagaagtgattctaggtcaaaaa 29249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 37040704 - 37040632
Alignment:
Q  102 tatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||||||| |||||||||  ||  |||||||  || |||| ||||| |||||||||||||||| |||||||    
T  37040704 tatgtgaaaaccacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattctaggtcaaaaa 37040632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 40556722 - 40556678
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  40556722 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 40556678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 45568504 - 45568567
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||    ||| || ||||||| |||||||||||||| ||||| |||||||||    
T  45568504 acaagacgcgaaatcaaac---gccacacaagacgacgaacaacacaacgccgcacttagacgacga 45568567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 52116160 - 52116208
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaa 143  Q
    |||||||||||||||||||||||||||  || |||| |||||| |||||    
T  52116160 cttgatatatgtgaaaatcacttatttaaattaaaacaaagggaaaaaa 52116208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 30894573 - 30894483
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||| || ||||||  ||  ||||||| |||||||| ||||| |||||||||||||||| |||||||||||| |||||||||    
T  30894573 atatatgtgaaaaccagttatttagattgaaagaaaagggaaaaacagatgtagaggggtgattctaggtcaaaaaatgatctaaaaccac 30894483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 12170436 - 12170342
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  12170436 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 12170342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 31296750 - 31296671
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| ||||| ||||| |||| | ||||| ||| |||||||    
T  31296750 cttgatatatgtgtaaatcacttatttgtatcgaaagaaggggtaaaaaaagatgcagagagatgattataggtcaaaaa 31296671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31296859 - 31296793
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactca 67  Q
    |||||||||||||| || |||||||| || |||||| |||| ||||||||||||||||| |||||||    
T  31296859 acactgcaacaagatgcaaaatcaaacaacgccgcacaagatgatgaacaacacaacgccgcactca 31296793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 33053317 - 33053411
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||| ||||||||| |||||||||||  |||||||||    
T  33053317 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaatgacctaaaaccac 33053411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 606144 - 606055
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaa 185  Q
    |||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| ||||||||||| |||| ||||||||||| ||||||    
T  606144 ttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgatcctaggtcaaaaaatgacataaaa 606055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 34018501 - 34018409
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacc 187  Q
    ||||||||||||||||| |||||||||  ||  |||||||  ||  ||| ||||| |||||||||||||||| |||||||||||  |||||||    
T  34018501 cttgatatatgtgaaaaccacttatttaaattgaaagaaaatgggtaaagagatgtagaggggtgattctaggtcaaaaaatgacctaaaacc 34018409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 14801147 - 14801069
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||| ||||||||  ||  |||||||||||||||| | ||  ||||||||||||||||||||||||    
T  14801147 cttgatgtatgtgaaaattacttatttagattgaaagaaaggggaaaaa-atatacagaggggtgattctagatcaaaaa 14801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30140576 - 30140627
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaac 52  Q
    |||||||||||||||| ||||||||  ||||||||| |||||||||||||||    
T  30140576 acactgcaacaagacgtgaaatcaagcaatgccgcacaagacgatgaacaac 30140627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 29320049 - 29320105
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||||  |||||||||    
T  29320049 aaaggggaaaaa-agatgtagaggggtgattctagatcaaaatatgacctaaaaccac 29320105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 34222731 - 34222649
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataa 183  Q
    ||||||||  ||| |||||||||  ||| ||||||||||||||||  |||| |||||||||||||||| | ||||||||| ||||    
T  34222731 atatatgttgaaaccacttatttagatcgaaagaaaggggaaaaa--gatgtagaggggtgattctaggttaaaaaatgacataa 34222649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 8102751 - 8102687
Alignment:
Q  11 aagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||| || |||||| ||||||| ||| ||||||||| |||||| |||||||||    
T  8102751 aagatgcgaaatcaaacaacgccgcacaagacgacgaaaaacacaacgttgcactaagacgacga 8102687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 13546741 - 13546785
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||    
T  13546741 gccgcataagacgacgaacaacacaacgccgcactcaaacgacga 13546785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 14801761 - 14801645
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatag-atggagaggggtgattctagatcaaaaaatgatataaaaccacatct 193  Q
    |||||| |||||||||||| |||||||  || |||| || ||| ||||| || ||| |||||||| ||||||| ||||||| |||  ||||| |||  ||    
T  14801761 cttgatgtatgtgaaaatcccttattttaattaaaaaaaggggaaaaaaaagaatgcagaggggttattctaggtcaaaaattgacctaaaatcacccct 14801662  T
Q  194 tctcgataagtgaaaga 210  Q
    ||||||| |||||||||    
T  14801661 tctcgatgagtgaaaga 14801645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 22571429 - 22571351
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||||||||| |||||||||||||  |||||||| ||| ||||||| ||||| ||| || ||||||||||| ||||||    
T  22571429 cttgatatatgtggaaatcacttatttagatcaaaag-aagaggaaaaa-agatgcagatggttgattctagataaaaaaa 22571351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 3913723 - 3913817
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaaga-aaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||| || |||||||| |||||  ||||||||||||||| |||||||||||  |||||||||    
T  3913723 cttgatagatgtgaaaaccacttatttagattgaaagagaatgggaaaaa-agatgcggaggggtgattctaggtcaaaaaatgacctaaaaccac 3913817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 20220839 - 20220760
Alignment:
Q  104 tgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaa 185  Q
    |||||||  |||||||||  ||| ||||||||||||||||  |||| ||| ||||||||| | |||||||||||| ||||||    
T  20220839 tgtgaaagccacttatttaaatcgaaagaaaggggaaaaa--gatgcagatgggtgattccatatcaaaaaatgacataaaa 20220760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 22114823 - 22114744
Alignment:
Q  104 tgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaa 185  Q
    |||||||  |||||||||  ||| ||||||||||||||||  |||| ||| ||||||||| | |||||||||||| ||||||    
T  22114823 tgtgaaagccacttatttaaatcgaaagaaaggggaaaaa--gatgcagatgggtgattccatatcaaaaaatgacataaaa 22114744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 29319937 - 29319998
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgac 73  Q
    ||||||||||||||||||    ||||||||||| || |||||||||||||| ||||| |||||||    
T  29319937 acaagacgcgaaatcaaac---gccgcataagaggacgaacaacacaacgccgcacttagacgac 29319998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 32191881 - 32191975
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||  |||||||||||||  ||| ||| ||| |||  ||| ||||| ||| |||||||| |||||||||||| ||  |||||||||    
T  32191881 cttgatatatgtagaaatcacttatttagatcgaaataaaagggggaaaaagatgcagaagggtgattgtagatcaaaaaaggacctaaaaccac 32191975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 127675 - 127638
Alignment:
Q  38 aagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  127675 aagacgacgaacaacacaacgctgcacttagacgacga 127638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 1523426 - 1523369
Alignment:
Q  18 gaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||| |||| |||| ||||||| |||||||||||||  ||||| |||||||||    
T  1523426 gaaatcaaacaatgtcgcacaagacgacgaacaacacaacgtcgcactaagacgacga 1523369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 68150 - 68229
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagagggg-tgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  || |||||||| ||| |||| ||||| ||||||| ||||||||| |||||||    
T  68150 cttgatagatgtgaaaaccacttatttagattaaaagaaaaggggaaaa-agatgtagagggggtgattctaggtcaaaaa 68229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7976234 - 7976302
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||  ||| ||| || |||||| ||||||| ||||||||||||   |||||||||||||||    
T  7976234 caacaagacgcataattaaaaaacgccgcacaagacgacgaacaacacaacaacgcactcagacgacga 7976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 8102660 - 8102580
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaagg-ggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| | ||||||||||||||||||  ||  ||||||||| | ||||| | ||| |||||||||||||||| |||||||    
T  8102660 cttgatgtttgtgaaaatcacttatttagattgaaagaaaggagaaaaaaaatatgcagaggggtgattctaggtcaaaaa 8102580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 30493564 - 30493500
Alignment:
Q  8 aacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||||||  |||||||||| || || ||| ||||||| |||||||||||| | ||||||||||||    
T  30493564 aacaagatacgaaatcaaacaacgctgcacaagacgacgaacaacacaacaccgcactcagacga 30493500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 33053246 - 33053290
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  33053246 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 33053290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51888262 - 51888336
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||| ||||||||||| || | ||||||||||||||||||||||||||| |||||||||| ||||    
T  51888262 acaccgcaacaagatgcgaaatcaaacaacgtcgcataagacgatgaacaacacaacgccgcactcagacaacga 51888336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 9643338 - 9643244
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaagggg--aaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||||||||||||  ||| ||||||| |||  ||||| ||||| ||| | |||||||||| ||||||||||| ||||||||||    
T  9643338 tgatatatgtgaaaatcacttatttagatcgaaagaaatgggaaaaaaaaagatgcagatgagtgattctaggtcaaaaaatgacataaaaccac 9643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 51888366 - 51888480
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||||||||||||| |||  |||  ||||||||||| ||| |||| |||||||||||||| |  |||||||||||  |||||||||  ||     
T  51888366 cttgatatatgtgaaaatcacttgtttagatcggaagaaaggggataaa-agattgagaggggtgattcaatgtcaaaaaatgacctaaaaccacccctc 51888464  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  51888465 ctcgatgagtgaaaga 51888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 206
Target Start/End: Complemental strand, 36161670 - 36161563
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttc 195  Q
    ||||||||||| ||||||||||||||  ||  ||||||| ||||||||   ||| ||| |||||||||||| |||||||||||  ||||||||| ||| |    
T  36161670 ttgatatatgtaaaaatcacttatttagattgaaagaaatgggaaaaa---atgcagatgggtgattctaggtcaaaaaatgacctaaaaccacctctcc 36161574  T
Q  196 tcgataagtga 206  Q
    ||||| |||||    
T  36161573 tcgatgagtga 36161563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 2520737 - 2520643
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  || |||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  2520737 cttgatagatgtgaaaaccacttatttagattgaacgaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 2520643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 4142904 - 4142997
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  4142904 cttgatagatgtgaaaa-cacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 4142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22300907 - 22300833
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||| |||||||||||||| || |||||| ||||||| |||||||||||||  |||| ||||||||||    
T  22300907 acaccgcaacaggacgcgaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcacacagacgacga 22300833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 24099219 - 24099325
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatc-aaaaaatgatataaaaccacatct 193  Q
    ||||||| |||||||||||||||||||  ||  ||||||| ||| |||| ||||| |||||| ||||||||| || |||||||||  ||||||||| |||    
T  24099219 cttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaaatgacctaaaaccacctct 24099318  T
Q  194 tctcgat 200  Q
     ||||||    
T  24099319 cctcgat 24099325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 32766474 - 32766380
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||| ||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  32766474 cttgatagatgtgaaaaacacttacttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 32766380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37683948 - 37683878
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacg 71  Q
    |||| ||||||||||||||||||||| ||  |  || |||||||||||||||||||||| |||||||||||    
T  37683948 acaccgcaacaagacgcgaaatcaaacaactctacacaagacgatgaacaacacaacgccgcactcagacg 37683878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 43510159 - 43510065
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||  |||||||||  ||  ||||||| |||||||| ||||| ||||| |||||||||| |||||||||||  |||||||||    
T  43510159 cttgataaatgtgaaagccacttatttagattgaaagaaaagggaaaaaaagatgtagaggagtgattctaggtcaaaaaatgacctaaaaccac 43510065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 53810988 - 53810894
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||||||||||||  ||  ||||||| |||  ||| ||||| |||||||||||| ||| |||||||||||  |||||||||    
T  53810988 cttgatagatgtgaaaatcacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccac 53810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 27651983 - 27651829
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaaatcac 115  Q
    ||||||||||| ||  ||||| ||||||| ||||||||||||| |||||| |||||||||   ||||| |         |||||| ||||||||||||||    
T  27651983 gcgaaatcaaacaacaccgcacaagacgacgaacaacacaacgttgcactaagacgacga---aatcacgaaagaaaaacttgatgtatgtgaaaatcac 27651887  T
Q  116 ttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||  ||  ||||||| |||||||| ||||| ||| ||||||| |||| |||||||    
T  27651886 ttatttagattgaaagaaatgggaaaaa-agatgcagatgggtgatcctaggtcaaaaa 27651829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 36194748 - 36194558
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaaatcac 115  Q
    ||||||||||| || |||||| ||||||| |||||||||||||  ||||| |||| ||||   ||||| |         |||||| ||||||||||||||    
T  36194748 gcgaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacaacga---aatcacgaaagaaaaacttgatgtatgtgaaaatcac 36194652  T
Q  116 ttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgataagtgaaaga 210  Q
    ||||||  ||  ||||||||| |||||| ||||| |||||| || || ||| ||||||| |||| ||||| |||   | ||||||||||||||||    
T  36194651 ttatttaaattgaaagaaaggagaaaaa-agatgcagagggatgtttttaggtcaaaaattgatctaaaatcacccatcctcgataagtgaaaga 36194558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 21225358 - 21225417
Alignment:
Q  128 aaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||  ||||||||    
T  21225358 aaagaaaggggaaaaa-agatggagagaggtgattttagatcaaaaaatgacctaaaacca 21225417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 18935745 - 18935668
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| ||||||||||||||| ||||  || ||||||||||||||||| ||||| ||| |||||||||||| |||||||    
T  18935745 cttgatgtatgtgaaaatcactaatttagattaaaagaaaggggaaaaa-agatgcaga-gggtgattctaggtcaaaaa 18935668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 35348265 - 35348183
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    |||||||| |||||||| |||||||||  ||  ||||||| |||||||| ||||| |||| ||||||||||| |||||||||||    
T  35348265 cttgatatttgtgaaaaccacttatttagattgaaagaaaagggaaaaa-agatgtagagaggtgattctaggtcaaaaaatga 35348183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 47320551 - 47320665
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||| || ||||||||||||| ||||| ||||  |||||| ||  ||||| |||||  |||||||||  |||    
T  47320551 cttgatatttgtgaaaatcacttatttagatcgaacgaaaggggaaaaa-agatgcagagttgtgattttaagtcaaagaatgacctaaaaccacccctt 47320649  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| || ||||||    
T  47320650 ctcgatgagcgaaaga 47320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 52944369 - 52944295
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||||| |||| ||| || |||||| || |||| |||||||||||||| |||||||||| ||||    
T  52944369 acaccgcaacaagacgcaaaattaaacaacgccgcacaaaacgacgaacaacacaacgccgcactcagactacga 52944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 9634632 - 9634563
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctag 166  Q
    |||||||||||||||||||||||||  ||| ||||||| | |||||| ||||| ||| || |||||||||    
T  9634632 tgatatatgtgaaaatcacttatttagatcgaaagaaatgagaaaaaaagatgcagatggatgattctag 9634563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 22300804 - 22300664
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||| |||||||||||||||||  ||  ||||||| | ||||||  |||| | |||||||||| ||| |||||||||||  |||||||||  ||     
T  22300804 cttgatatacgtgaaaatcacttatttaaattgaaagaaaagagaaaaa-ggatgcaaaggggtgattttaggtcaaaaaatgacctaaaaccactcctc 22300706  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaagttgga 235  Q
    |||||  ||||||||| ||| | || || |||||||||||||    
T  22300705 ctcgacgagtgaaagagaaataaaatttagagagaagttgga 22300664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 5119299 - 5119204
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaa-aggggaaaaatagatggagaggggtgattctagat-caaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| |||||||||  ||  |||||| ||||| |||| ||||| |||||||||||||||| |  ||||||||| ||||||||||    
T  5119299 cttgatatatgtgaaaaccacttatttagattgaaagaagagggggaaaa-agatgtagaggggtgattctaggtaaaaaaaatgacataaaaccac 5119204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 9713867 - 9713788
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||||||||| |||||||||||||  ||  |||||||||||||||| ||||| ||||  |||||||||| | ||||||    
T  9713867 cttgatatatgtggaaatcacttatttagattgaaagaaaggggaaaaa-agatgtagagaagtgattctaggtaaaaaaa 9713788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 21686390 - 21686470
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||| ||| ||||||||    
T  21686390 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattttaggtcaaaaaa 21686470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 22038950 - 22039062
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||| |||||||||||||||||||  ||  ||||||||||  |||| ||||| | | ||||||||||||||| |||| |||  |||||||||  ||     
T  22038950 cttgatagatgtgaaaatcacttatttagatagaaagaaaggg--aaaaaagatgca-aagggtgattctagatccaaaattgacctaaaaccacccctg 22039046  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  22039047 ctcgatgagtgaaaga 22039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26633722 - 26633793
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||||||||| || |||   |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  26633722 acactgcgacaagacgcgaagtccaat---gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 26633793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 19853587 - 19853634
Alignment:
Q  28 aatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| |||||||||| |||||||||||||| ||||| |||||||||    
T  19853587 aatgccacataagacgacgaacaacacaacgccgcacttagacgacga 19853634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 19853661 - 19853740
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  ||   |||||| ||| |||| ||||| |||||||||||||||| |||||||    
T  19853661 cttgatagatgtgaaaaccacttatttagattggaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaa 19853740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 22611143 - 22611064
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| ||| |||||||||||| |||||||    
T  22611143 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctaggtcaaaaa 22611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28857460 - 28857389
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||| ||||| ||||||| ||||||| || |||||| ||||| | |||||||||||||| ||||| ||||||    
T  28857460 acaccgcaactagacgcggaatcaaacaacgccgcacaagacaacgaacaacacaacgccgcacttagacga 28857389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 56040793 - 56040874
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaa--aggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||| ||||||||| |||||||||  ||  ||||||  |||||||||| ||||| |||||||||||||||| ||||||||    
T  56040793 cttgatagatgtgaaaaccacttatttagattgaaagaagaaggggaaaaa-agatgtagaggggtgattctaggtcaaaaaa 56040874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 9178312 - 9178234
Alignment:
Q  100 tatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    |||||||||||| || ||||||  ||  ||||||| |||| ||| ||||| ||| |||||||||||| |||||||||||    
T  9178312 tatatgtgaaaaccatttatttagattgaaagaaaagggagaaaaagatgtagaagggtgattctaggtcaaaaaatga 9178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9643446 - 9643372
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||| | ||||||||| || | |||  ||||||| |||||||||||||  |||||| ||||||||    
T  9643446 acactgcaacaagatgagaaatcaaacaacgtcgctcaagacgacgaacaacacaacgtcgcactcggacgacga 9643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 21231628 - 21231678
Alignment:
Q  138 gaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    |||||| |||||||||| ||||||| |||||||||||||||  ||||||||    
T  21231628 gaaaaaaagatggagagaggtgattttagatcaaaaaatgacctaaaacca 21231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 43853495 - 43853445
Alignment:
Q  6 gcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaa 56  Q
    ||||||| ||||||||||||| || |||||| |||| ||||||||||||||    
T  43853495 gcaacaatacgcgaaatcaaacaacgccgcacaagatgatgaacaacacaa 43853445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 45418486 - 45418392
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||||| | ||||||| |||  | ||||| | | |||| || || |||||| ||||||||| |||||||||||  |||||||||    
T  45418486 cttgatatatgtgaaaacctcttatttatattgagagaaaagaggaaaagaggtgtagagggatgattctaggtcaaaaaatgacctaaaaccac 45418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 52934000 - 52934066
Alignment:
Q  6 gcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    ||||||||| ||||||||||| || || ||| || | || |||||||||||||| ||||||||||||    
T  52934000 gcaacaagatgcgaaatcaaacaacgctgcacaaaatgacgaacaacacaacgccgcactcagacga 52934066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 52944266 - 52944193
Alignment:
Q  100 tatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||||||||  ||  ||||||| ||||||||| |||  |||||| ||||| |||||||||||    
T  52944266 tatatgtgaaaatcacttatttagattgaaagaaaagggaaaaat-gatacagagggatgattttagatcaaaaa 52944193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 7009123 - 7009226
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| |||||| |||||| ||||| | ||| ||||||| |||||||| ||||   ||| |||||||||||  |||||  |||| ||||||||||||||    
T  7009123 cttgatgtatgtggaaatcagttattag-atcgaaagaaaagggaaaaa-agattcggagaggtgattctaggccaaaagttgatctaaaaccacatctt 7009220  T
Q  195 ctcgat 200  Q
    ||||||    
T  7009221 ctcgat 7009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 9165196 - 9165297
Alignment:
Q  100 tatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa-atgatataaaaccacatcttctcg 198  Q
    |||||||||||| |||||||||  ||  ||||| | |||| ||| ||||| |||||||||||||||| | ||||| ||||  ||||||||| ||| ||||    
T  9165196 tatatgtgaaaaccacttatttagattgaaagataagggagaaaaagatgtagaggggtgattctaggtaaaaaatatgacctaaaaccacctctcctcg 9165295  T
Q  199 at 200  Q
    ||    
T  9165296 at 9165297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 22558613 - 22558708
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaa--ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||  ||  |||||||  ||||||||| ||||| |||| ||||||||||  |||||||||||  |||||||||    
T  22558613 cttgatagatgtgaaaaccacttatttagattgaaagaaaaaggggaaaaa-agatgtagagaggtgattctatgtcaaaaaatgacctaaaaccac 22558708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 33921011 - 33920949
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtg 159  Q
    ||||||||||||||||||||||||||  |||  ||||||| |||||||| ||||| ||| |||||    
T  33921011 cttgatatatgtgaaaatcacttatt--tattgaaagaaaagggaaaaaaagatgtagatgggtg 33920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 35395758 - 35395795
Alignment:
Q  38 aagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  35395758 aagacgacgaacaacacaacgccgcactcagacgacga 35395795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 1621647 - 1621707
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagagg 155  Q
    |||||| ||||||||||||||||||||  ||  || ||||||||||||| ||||| |||||    
T  1621647 cttgatgtatgtgaaaatcacttatttagattgaatgaaaggggaaaaaaagatgcagagg 1621707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 4142833 - 4142877
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  4142833 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 4142877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12199744 - 12199815
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||||| ||||||||    || ||| || |||||||||||||||||||  ||||||||||||||    
T  12199744 acaccgcaacaagacgcaaaatcaaaa---gctgcacaaaacgatgaacaacacaacgccacactcagacgacga 12199815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22611214 - 22611170
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  22611214 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 22611170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 33332628 - 33332696
Alignment:
Q  7 caacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||| ||||||||||| || | |||| ||| |||  ||||||||||||| |||| ||||||||||    
T  33332628 caacaagatgcgaaatcaaacaacgtcgcacaaggcgacaaacaacacaacgccgcacacagacgacga 33332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33921109 - 33921038
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||||| |||||||||    | |||||||||||  |||||||||||||| ||||| |||||||||    
T  33921109 acactgcgacaagacgtgaaatcaaac---gtcgcataagacggcgaacaacacaacgccgcacttagacgacga 33921038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 35348338 - 35348294
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  35348338 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 35348294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 48257648 - 48257692
Alignment:
Q  145 agatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| ||| |||||||||||| ||||||||||| ||||||||||    
T  48257648 agatgtagatgggtgattctaggtcaaaaaatgacataaaaccac 48257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 15344247 - 15344107
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||| | | |||||||||||| ||||| |||||||| ||| ||| ||||| |||||  |||||||||  ||     
T  15344247 cttgatatttgtgaaaatcacttatttagatccatataaaggggaaaaa-agatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctc 15344149  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaagttgga 235  Q
    |||||| ||||||||| || || ||||| |||||||||||||    
T  15344148 ctcgatgagtgaaagagaagaaaaacttagagagaagttgga 15344107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 15433312 - 15433172
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||| | | |||||||||||| ||||| |||||||| ||| ||| ||||| |||||  |||||||||  ||     
T  15433312 cttgatatttgtgaaaatcacttatttagatccatataaaggggaaaaa-agatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctc 15433214  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaagttgga 235  Q
    |||||| ||||||||| || || ||||| |||||||||||||    
T  15433213 ctcgatgagtgaaagagaagaaaaacttagagagaagttgga 15433172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 15524616 - 15524476
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||||| ||||||||||||||||||  ||| | | |||||||||||| ||||| |||||||| ||| ||| ||||| |||||  |||||||||  ||     
T  15524616 cttgatatttgtgaaaatcacttatttagatccatataaaggggaaaaa-agatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctc 15524518  T
Q  195 ctcgataagtgaaaga-aaaaagaacttggagagaagttgga 235  Q
    |||||| ||||||||| || || ||||| |||||||||||||    
T  15524517 ctcgatgagtgaaagagaagaaaaacttagagagaagttgga 15524476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 18890861 - 18890967
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgataa 202  Q
    |||||||||||||||||||  ||  |||||||||||||||| ||||| ||| | |||||||||| ||||||| |||  ||||| |||  |||||||||||    
T  18890861 atgtgaaaatcacttatttagattgaaagaaaggggaaaaa-agatgcagatgagtgattctaggtcaaaaattgacctaaaatcaccccttctcgataa 18890959  T
Q  203 gtgaaaga 210  Q
    ||||||||    
T  18890960 gtgaaaga 18890967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8443560 - 8443634
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||||||| ||||||| || |||||| ||||||| |||||||||||| | ||||| |||||||||    
T  8443560 acactgcaacaagacgcggaatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgacga 8443634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 37971226 - 37971140
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  37971226 atgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 37971140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 20559893 - 20559985
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaa-ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||||||||||||  ||  ||||||| |||||||||   ||| |||||||||||||||| || ||||||||| |||||||||    
T  20559893 cttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa---atgtagaggggtgattctaggtccaaaaatgatctaaaaccac 20559985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 20571455 - 20571547
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaa-ggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||||||||||||  ||  ||||||| |||||||||   ||| |||||||||||||||| || ||||||||| |||||||||    
T  20571455 cttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa---atgtagaggggtgattctaggtccaaaaatgatctaaaaccac 20571547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 1239553 - 1239644
Alignment:
Q  97 tgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||| ||||||||||||||||||  ||| || ||||||||||||| ||||| |||||||||||| ||| ||||| || ||  |||||||||    
T  1239553 tgatatttgtgaaaatcacttatttagatcgaacgaaaggggaaaaa-agatgcagaggggtgattttaggtcaaagaaggacctaaaaccac 1239644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 8826151 - 8826035
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagagggg-tgattctagatcaaaaaatgatataaaaccacatct 193  Q
    |||||||| ||| ||||||||||||||  ||| ||| ||||||| |||| ||||  | ||||| |||||||||||||||||||||  |||||||||   |    
T  8826151 cttgatatgtgtaaaaatcacttatttagatcgaaataaagggggaaaaaagatacaaagggggtgattctagatcaaaaaatgacctaaaaccacccat 8826052  T
Q  194 tctcgataagtgaaaga 210  Q
     |||||| |||||||||    
T  8826051 cctcgatgagtgaaaga 8826035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 14585641 - 14585565
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaa 171  Q
    |||||| ||||||||||||||||||||  ||  ||||||| | |||||| ||||| |||||||||||||||| ||||    
T  14585641 cttgatgtatgtgaaaatcacttatttagattgaaagaaaagagaaaaaaagatgcagaggggtgattctaggtcaa 14585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 31013721 - 31013812
Alignment:
Q  98 gatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||| ||||||||| |||||||||  ||  ||||||| |||  ||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  31013721 gatagatgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 31013812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1239445 - 1239519
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||| || |||||||| || |||||| ||||||||||||||||||| |  ||||| |||||||||    
T  1239445 acaccgcaacaagatgccaaatcaaacaacgccgcacaagacgatgaacaacacaaggtcgcacttagacgacga 1239519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8826252 - 8826178
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||| |||| ||| | || ||| || ||||||| |||||||| |||||||||||||||||||||    
T  8826252 acaccgcaacaagacacgaattcacacaacgccacacaagacgacgaacaacataacgctgcactcagacgacga 8826178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 14545050 - 14545144
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagag-gggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||| |||||||||  ||  ||||||| | |||||| ||||| |||| |||||||| ||| |||||||||||  |||||||||    
T  14545050 ttgatatatgtgaaaaccacttatttagattgaaagaaaagagaaaaaaagatgtagagagggtgattttaggtcaaaaaatgacctaaaaccac 14545144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 28897653 - 28897559
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||  |||||| |||||||||  ||  ||||||| | | |||| ||||| |||||||||||| |||||||||||||||  |||||||||    
T  28897653 cttgatatacatgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattttagatcaaaaaatgacttaaaaccac 28897559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34609873 - 34609799
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||| | ||||||||||| | |||| ||||||| ||||||| |||||| ||||| |||||||||    
T  34609873 acaccgcaacaagacacaaaatcaaataacgtcgcacaagacgaggaacaacccaacgccgcacttagacgacga 34609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 5046691 - 5046613
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||  ||||| | ||||| |||||||| | ||||||    
T  5046691 cttgatatgtgtgaaaatcacttatttaaattaaaagaaaggggaaaa--agatgcataggggcgattctaggtaaaaaaa 5046613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3673481 - 3673410
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| |||||||||| |||||||||| |   ||||||||||||| |||||||||||| | ||||| |||||||||    
T  3673481 acaccgcaacaagacacgaaatcaaaca---ccgcataagacgacgaacaacacaacaccgcacttagacgacga 3673410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 25191223 - 25191318
Alignment:
Q  104 tgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatcttctcgat 200  Q
    ||||||||||||||||||   |  ||||||| |||||||| ||||| ||| |||||||||||| |||||||||||  ||||| ||| ||| ||||||    
T  25191223 tgtgaaaatcacttatttaatttgaaagaaaagggaaaaa-agatgtagatgggtgattctaggtcaaaaaatgacctaaaatcacctctcctcgat 25191318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28086862 - 28086933
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||||||||||||||||   || ||| |||| || |||||||||||||| ||||| |||||||||    
T  28086862 acactgcgacaagacgcgaaatcaaat---gctgcacaagatgacgaacaacacaacgcagcacttagacgacga 28086933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29617323 - 29617379
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaac 57  Q
    |||| ||||||||||||||||||||| |  |||||| ||||||| ||||||||||||    
T  29617323 acaccgcaacaagacgcgaaatcaaacagcgccgcacaagacgacgaacaacacaac 29617379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 5333462 - 5333395
Alignment:
Q  8 aacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||| |||||||| ||  ||||| ||||||| |||||||||||| | ||||||||| |||||    
T  5333462 aacaagacgcaaaatcaaacaacaccgcacaagacgacgaacaacacaacaccgcactcagatgacga 5333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 24099410 - 24099488
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    |||||| |||||| |||||||||||||  ||| |||||||| ||||| | | ||| |||||||||||||||| |||||||    
T  24099410 cttgatctatgtggaaatcacttatttaaatcgaaagaaagaggaaaca-aaatgcagaggggtgattctaggtcaaaaa 24099488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 20553401 - 20553486
Alignment:
Q  103 atgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||||||  ||  ||||||| |||||||| | |||  | ||||||||||||| || ||||||||| |||||||||    
T  20553401 atgtgaaaatcacttatttagattgaaagaaaagggaaaaaaa-atgttgtggggtgattctaggtccaaaaatgatctaaaaccac 20553486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24099304 - 24099378
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||| ||||||||||| || || | | | ||||| |||||||||||||  |||||||||||||||    
T  24099304 acaccgcaacaagatgcgaaatcaaacaacgcggtacaggacgacgaacaacacaacgtcgcactcagacgacga 24099378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 27110611 - 27110705
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||||||||||| | |||||||||  ||  ||||||| | | |||| ||||| ||| | |||||| |||||||||||||||  |||||||||    
T  27110611 cttgatatatgtgaagaccacttatttagattgaaagaaaagagtaaaaaagatgtagatgtgtgattttagatcaaaaaatgacctaaaaccac 27110705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 29938056 - 29937963
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||| |||||| |||||||||   |  ||||||| ||  |||| ||||| |||||||||||||||| || ||||||||| |||||||||    
T  29938056 cttgatatatatgaaaaccacttatttaggttgaaagaaaaggcgaaaaaagatgtagaggggtgattctaggtc-aaaaatgatctaaaaccac 29937963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33342502 - 33342448
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacaca 55  Q
    |||| ||||||| ||| ||||||||| || |||||||||||||| ||||||||||    
T  33342502 acaccgcaacaatacgggaaatcaaaaaacgccgcataagacgaagaacaacaca 33342448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 6831531 - 6831490
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaagg 136  Q
    |||||||||||||||| ||||||||||| ||| |||||||||    
T  6831531 cttgatatatgtgaaattcacttatttgaatcgaaagaaagg 6831490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 3240318 - 3240238
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||||||||| |||||||||||||  ||  |||| ||  | ||||| ||||| ||| |||||||||||||| ||||||    
T  3240318 cttgatatatgtggaaatcacttatttagattgaaaggaaatgaaaaaaaagatgcagatgggtgattctagataaaaaaa 3240238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 7677477 - 7677521
Alignment:
Q  145 agatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||    
T  7677477 agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 7677521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 7883387 - 7883467
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaagg-ggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| | || |||| ||||| |||||||||||| |||||||||||    
T  7883387 cttgatagatgtgaaaaccacttatttagattgaaagaaaagagggaaaaaagatgtagaggggtgattatagatcaaaaa 7883467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 8443671 - 8443715
Alignment:
Q  98 gatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaa 142  Q
    |||||||||| |||||||||||||  ||| |||||||||||||||    
T  8443671 gatatatgtggaaatcacttatttagatcgaaagaaaggggaaaa 8443715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 20553317 - 20553361
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||    
T  20553317 gccgcataagacgacgaacaacaaaacgccgcacttagacgacga 20553361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 202
Target Start/End: Original strand, 37663221 - 37663329
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaag-gggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatct 193  Q
    |||||||||||| |||| |||||||||  ||| ||| |||| |  ||||| ||||||||| | |||||||||  ||||||||||  |||||||||| | |    
T  37663221 cttgatatatgtaaaaaccacttatttacatcgaaataaagagataaaaaaagatggagatgagtgattctatgtcaaaaaatggcataaaaccacttat 37663320  T
Q  194 tctcgataa 202  Q
     ||||||||    
T  37663321 cctcgataa 37663329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 39657480 - 39657416
Alignment:
Q  11 aagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||| || |||||| ||||||| |||||| ||||||  ||||| |||||||||    
T  39657480 aagatgcgaaatcaaacaacgccgcacaagacgacgaacaatacaacgtcgcactaagacgacga 39657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 40211452 - 40211532
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaa 175  Q
    ||||||| ||||||||| | |||||||  ||  ||||||| | | |||| ||||| |||||||||||||||| ||||||||    
T  40211452 cttgatagatgtgaaaaccgcttatttagattgaaagaaaagagtaaaaaagatgtagaggggtgattctaggtcaaaaaa 40211532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19120950 - 19120886
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcact 65  Q
    |||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  19120950 acaccgcaacaagacgcgaaatcaaacaatgcctcataagacgacgaacaacacaacgccgcact 19120886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10332599 - 10332656
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacg 58  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||    
T  10332599 acactgcaacaagacgcgaaatcaaacaatgccgcacaagacgacaaacaacacaacg 10332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 2979462 - 2979576
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| ||||||||||||||||||||  ||  |||||||| ||||||| ||||| |||||||||||| ||| ||||||| |||  ||||| |||  ||     
T  2979462 cttgatgtatgtgaaaatcacttatttagattgaaagaaagaggaaaaa-agatgcagaggggtgattataggtcaaaaattgacctaaaatcacccctc 2979560  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  2979561 ctcgatgagtgaaaga 2979576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 39567234 - 39567120
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| ||||||||||||||||||||  ||  ||||||||||| |||| ||||| ||||| |||||||||| ||||||| |||  ||||| |||  ||     
T  39567234 cttgatgtatgtgaaaatcacttatttagattgaaagaaagggggaaaa-agatgcagaggcgtgattctaggtcaaaaattgacctaaaatcacccctc 39567136  T
Q  195 ctcgataagtgaaaga 210  Q
    |||||| |||||||||    
T  39567135 ctcgatgagtgaaaga 39567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 6012287 - 6012381
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| | ||||||| |||||||||  ||  ||||||| |||||||| ||||| |||||||||||||||  |||||||||||  |||||||||    
T  6012287 cttgatagacgtgaaaaacacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccac 6012381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 31314692 - 31314631
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattc 163  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||   ||| |||||||||||||    
T  31314692 atatatgtggaaatcacttatttatatcaaaagaaaggggaaaaa---atgtagaggggtgattc 31314631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 38597736 - 38597643
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| |||||||||||||||||||  ||  ||||||  |||||||| ||||| |||||||||||||||| ||||||||| |  |||||||||    
T  38597736 cttgatagatgtgaaaatcacttatttaaattgaaagaatagggaaaaa-agatgtagaggggtgattctaggtcaaaaaataacctaaaaccac 38597643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 13007168 - 13007063
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||| ||||||||| |||||||||  ||  |||||||  || |||| || || |||||||||||||||| |||||||||||  ||||||||| |||     
T  13007168 cttgatagatgtgaaaaccacttatttagattgaaagaaaatgggaaaaaaggtgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctc 13007069  T
Q  195 ctcgat 200  Q
    ||||||    
T  13007068 ctcgat 13007063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 19103623 - 19103691
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattct 164  Q
    |||||| ||||||||||||||||||||  ||| |||||||||||||||| |||||  |||||||||||||    
T  19103623 cttgatgtatgtgaaaatcacttatttagatcgaaagaaaggggaaaaa-agatgctgaggggtgattct 19103691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 26878228 - 26878332
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| |||||||||| |||||||||  ||  ||||||| |||  ||| ||||| |||| |||||||||||||| |||||||| |||||||||| |||     
T  26878228 cttgatttatgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagagaggtgattctagatc-aaaaatgacataaaaccacctctc 26878326  T
Q  195 ctcgat 200  Q
    ||||||    
T  26878327 ctcgat 26878332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 31364440 - 31364395
Alignment:
Q  99 atatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaat 144  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31364440 atatatgtggaaatcacttatttatatcaaaagaaaggggaaaaat 31364395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 34945361 - 34945268
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| |||| ||||| ||| |||||||||||| |||||||||||  ||||||||    
T  34945361 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaagggtgattctaggtcaaaaaatgacctaaaacca 34945268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 9113874 - 9113957
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatga 178  Q
    ||||||| ||||||||| |||||||||  || ||||||||  || |||| ||||| |||||||||||||||| | |||||||||    
T  9113874 cttgatagatgtgaaaaccacttatttagattaaaagaaaatgggaaaaaagatgtagaggggtgattctaggttaaaaaatga 9113957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 14211245 - 14211093
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacgacgaaatcatgnnnnnnnnncttgatatatgtgaaaatcac 115  Q
    ||||||||||| || |||||| ||||||| ||||||||||| |  ||||| |||||||||   ||||| |         |||||| ||||||||||||||    
T  14211245 gcgaaatcaaacaacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacga---aatcacgaaataaaaacttgatgtatgtgaaaatcac 14211149  T
Q  116 ttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||  ||  ||||||||||   ||| ||||| |||||||||||||||| |||||||    
T  14211148 ttatttagattgaaagaaaggg---aaaaagatgcagaggggtgattctaggtcaaaaa 14211093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 38007295 - 38007203
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||| |||||||| |||||||||  ||  ||||||| ||||||||  |||| ||||||||||||| || |||||||||||  |||||||||    
T  38007295 cttgatatgtgtgaaaaccacttatttaaattgaaagaaaagggaaaaa--gatgtagaggggtgattcgaggtcaaaaaatgacctaaaaccac 38007203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 31391943 - 31392000
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||| ||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  31391943 aaaggggagaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 31392000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31391804 - 31391875
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||| |||||| ||||||||||||   |||||| ||||||| |||||||||||||  ||||| |||||||||    
T  31391804 acactgcgacaagatgcgaaatcaaat---gccgcacaagacgaagaacaacacaacgtcgcacttagacgacga 31391875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 38597826 - 38597763
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  38597826 acaagacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 38597763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8088262 - 8088317
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaa 56  Q
    |||||||||||||| || |||||||| || |||||| |||||||| ||||||||||    
T  8088262 acactgcaacaagatgccaaatcaaacaacgccgcacaagacgataaacaacacaa 8088317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 8096647 - 8096725
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaa 174  Q
    ||||||||||||||||| |||||||||  ||  ||||||| |||||||| |||   |||||||||||||||| |||||||    
T  8096647 cttgatatatgtgaaaaccacttatttagattgaaagaaaagggaaaaa-agaaatagaggggtgattctaggtcaaaaa 8096725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 19349730 - 19349679
Alignment:
Q  5 tgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaa 56  Q
    |||||| ||||| |||||||||||| |||||| ||||||| |||||||||||    
T  19349730 tgcaactagacgtgaaatcaaataacgccgcacaagacgacgaacaacacaa 19349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 37986169 - 37986227
Alignment:
Q  6 gcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactca 67  Q
    ||||||||| |||||||||||    |||||| |||||||||||||||||||||| |||||||    
T  37986169 gcaacaagatgcgaaatcaaac---gccgcacaagacgatgaacaacacaacgccgcactca 37986227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35921047 - 35921121
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||||||||||||||||| || | | |||||||||| |||||| | || |  |||||||||||||||    
T  35921047 acaccgcaacaagacgcgaaatcaaacaacgtctcataagacgacgaacaatataatgtcgcactcagacgacga 35921121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42886538 - 42886484
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacaca 55  Q
    ||||||||||||| || ||||||||| || |||||| ||||||| ||||||||||    
T  42886538 acactgcaacaaggcgggaaatcaaacaacgccgcacaagacgacgaacaacaca 42886484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 7036166 - 7036073
Alignment:
Q  96 ttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||||||| |||||||||  ||  ||||||| | | |||| ||||| ||| | |||||| ||| |||||||||||  |||||||||    
T  7036166 ttgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaatgacctaaaaccac 7036073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 26510696 - 26510765
Alignment:
Q  3 actgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    ||||||||||||||| |||||||| || | |||| |||| || ||| ||||||||||| |||| ||||||    
T  26510696 actgcaacaagacgcaaaatcaaacaacgacgcacaagatgacgaataacacaacgctacacttagacga 26510765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 11073959 - 11074022
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||||    |||||| ||||||| |||||| ||||||||||||| |||| ||||    
T  11073959 acaagacgcgaaatcaaac---gccgcacaagacgacgaacaaaacaacgctgcacttagacaacga 11074022  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 13007239 - 13007195
Alignment:
Q  31 gccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  13007239 gccgcacaagacgacgaacaacacaacgccgcacttagacgacga 13007195  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28540976 - 28541032
Alignment:
Q  16 gcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    ||||||||||| || |||||| ||||||| |||||||||||||  ||||| ||||||    
T  28540976 gcgaaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacga 28541032  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 28541062 - 28541110
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaa 143  Q
    |||||| ||||||||||||||||||||  ||  ||||||||||||||||    
T  28541062 cttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaa 28541110  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38110999 - 38111063
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcact 65  Q
    ||||||||||||||| | |||||||| || |||||| ||||| |  ||||||||||| |||||||    
T  38110999 acactgcaacaagacacaaaatcaaacaacgccgcacaagacaacaaacaacacaacactgcact 38111063  T

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Target: scaffold0888 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 1824 - 1938
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    |||||| ||||||||||||||||||||  ||  |||||||||||||||| ||||| |||| ||||||||||| ||||||| |||  ||| | |||  ||     
T  1824 cttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaa-agatgcagagaggtgattctaggtcaaaaattgacctaatatcacccctc 1922  T
Q  195 ctcgataagtgaaaga 210  Q
    ||||||||||||||||    
T  1923 ctcgataagtgaaaga 1938  T

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Target: scaffold0445 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 200
Target Start/End: Complemental strand, 1283 - 1179
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||||||| |||||||||  |   ||||||| |||||||| ||| | |||||||||||||||| |||||||||||  ||||||||| |||     
T  1283 cttgatatatgtgaaaaccacttatttagagtgaaagaaaagggaaaaa-agaagtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctc 1185  T
Q  195 ctcgat 200  Q
    ||||||    
T  1184 ctcgat 1179  T

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Target: scaffold0445; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1382 - 1314
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacga 72  Q
    |||| |||||||||||||||||||||    ||| || ||||||| |||||||||||||| ||||| ||||||    
T  1382 acaccgcaacaagacgcgaaatcaaac---gccacacaagacgacgaacaacacaacgccgcacttagacga 1314  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 235
Target Start/End: Original strand, 58229 - 58369
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||||||||| |||||||||||||  ||  ||||||| || |||||  |||| |||||||||||| ||| |||||||||||  |||||||||  ||     
T  58229 cttgatatatgtggaaatcacttatttagattgaaagaaaaggaaaaaag-gatgcagaggggtgattttaggtcaaaaaatgacctaaaaccacccctc 58327  T
Q  195 ctcgataagtgaaagaaaa-aagaacttggagagaagttgga 235  Q
    |||||  ||||||||||||  | ||||| |||||||||||||    
T  58328 ctcgacgagtgaaagaaaacgaaaacttagagagaagttgga 58369  T

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Target: scaffold0347 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6068 - 5994
Alignment:
Q  1 acactgcaacaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    |||| ||||||| ||||||||||||| || |||||| ||||||| |||||||||| |  ||||||||||||||||    
T  6068 acaccgcaacaatacgcgaaatcaaacaacgccgcacaagacgacgaacaacacatcattgcactcagacgacga 5994  T

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Target: scaffold0884 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 2159 - 2215
Alignment:
Q  132 aaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  2159 aaaggggaaaaa-agatgtagaggggtgattctagatcaaaaaatgacttaaaaccac 2215  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 202
Target Start/End: Original strand, 32897 - 33004
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccacatctt 194  Q
    ||||||| ||||||||| |||||||||  ||  ||||||| ||| | || ||||| |||||||||||||||  |||||||||||  |||||||||  ||     
T  32897 cttgatagatgtgaaaaccacttatttagattgaaagaaaaggggacaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccactcctc 32996  T
Q  195 ctcgataa 202  Q
    ||||||||    
T  32997 ctcgataa 33004  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 32806 - 32869
Alignment:
Q  9 acaagacgcgaaatcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||||||||||   || |||||| ||||||| |||||||| ||||| ||||| |||||||||    
T  32806 acaagacgcgaaatca---aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacga 32869  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 7655 - 7564
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaacca 188  Q
    ||||||||||||||||| |||||||||  ||  ||||||||||| |||  ||||| ||| | |||||||||| |||||||||||  ||||||||    
T  7655 cttgatatatgtgaaaaccacttatttaaattgaaagaaaggggtaaa--agatgcagatgagtgattctaggtcaaaaaatgacctaaaacca 7564  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 72013 - 72107
Alignment:
Q  95 cttgatatatgtgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||||| ||||||||| |||||||||| ||  ||||||| |||  ||| ||||| |||  ||||||||||| |||||||||||  |||||||||    
T  72013 cttgatagatgtgaaaaccacttatttggattgaaagaaaagggggaaaaagatgaagaatggtgattctaggtcaaaaaatgacctaaaaccac 72107  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 15420 - 15338
Alignment:
Q  106 tgaaaatcacttatttgtatcaaaagaaaggggaaaaatagatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    |||||| |||||||||  ||  ||||||| ||| |||| ||||| |||||||||||||||| |||||||||||  |||||||||    
T  15420 tgaaaaccacttatttagattgaaagaaaaggggaaaa-agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 15338  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 93139 - 93070
Alignment:
Q  7 caacaagacgcgaa-atcaaataatgccgcataagacgatgaacaacacaacgctgcactcagacgacga 75  Q
    ||||||||| |||| |||||| || |||||| ||||| |  ||||||||||||| |||||||||||||||    
T  93139 caacaagacacgaatatcaaacaacgccgcacaagacaacaaacaacacaacgcagcactcagacgacga 93070  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 25528 - 25572
Alignment:
Q  145 agatggagaggggtgattctagatcaaaaaatgatataaaaccac 189  Q
    ||||| |||||||||||| ||| ||||||||||| ||||||||||    
T  25528 agatgtagaggggtgattataggtcaaaaaatgacataaaaccac 25572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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