View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18178_low_161 (Length: 218)
Name: NF18178_low_161
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18178_low_161 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 2170357 - 2170533
Alignment:
| Q |
19 |
attaatatttctatttaccaaatcatccttgtcttaaccaaattgaatatctcatttgtcacatttacatgttacatacatctccaaagtcactgtttct |
118 |
Q |
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| T |
2170357 |
attaatatttctatttaccaaatcatccttgtcttaaccaaattgaatatctcatttgtcacatttacatgttacatacatctccaaagtcactgtttca |
2170456 |
T |
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| Q |
119 |
ccaaaatggcatctcatgtatgtgtctctccttttccttttctctttacattcaagttgtcaacattttaatgtcatatatct |
201 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2170457 |
ccaaaatggcatctcatgtatgtgtctc------tccttttctctttacattcaagttgtcaacattttaatgtcatatatct |
2170533 |
T |
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