View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_low_52 (Length: 426)

Name: NF18178_low_52
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_low_52
NF18178_low_52
[»] chr4 (16 HSPs)
chr4 (11-408)||(3749100-3749497)
chr4 (12-408)||(5858213-5858609)
chr4 (19-400)||(5564956-5565337)
chr4 (29-398)||(5605283-5605653)
chr4 (32-400)||(5886017-5886385)
chr4 (271-408)||(5582992-5583129)
chr4 (241-408)||(5570785-5570952)
chr4 (242-394)||(5852682-5852834)
chr4 (29-404)||(5894858-5895233)
chr4 (301-408)||(5847794-5847901)
chr4 (270-393)||(5553616-5553739)
chr4 (300-404)||(5538926-5539030)
chr4 (230-404)||(5559376-5559550)
chr4 (19-93)||(5852983-5853057)
chr4 (19-93)||(5553367-5553441)
chr4 (29-78)||(252329-252378)
[»] chr8 (2 HSPs)
chr8 (32-264)||(1483224-1483456)
chr8 (312-400)||(1485703-1485791)
[»] scaffold0454 (1 HSPs)
scaffold0454 (312-400)||(884-973)


Alignment Details
Target: chr4 (Bit Score: 390; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 11 - 408
Target Start/End: Original strand, 3749100 - 3749497
Alignment:
Q  11 cacagattcaagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctca 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3749100 cacagattcaagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataattttctca 3749199  T
Q  111 ggtttccaataatgttaggtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3749200 ggtttccaataatgttaggtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatg 3749299  T
Q  211 gagatttttgttgttaaacaagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3749300 gagatttttgttgttaaacaagtcaatagttgacagtgttccaatctgaaagattgcatgtggaaatgtaccggtcaattcacaaagcgcaagactgagg 3749399  T
Q  311 gtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttgttag 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3749400 gtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttgttag 3749497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 5858213 - 5858609
Alignment:
Q  12 acagattcaagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctcag 111  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||   ||||||||  ||||     
T  5858213 acagatccaagtaactgaggtgtgtgaggtttgacaatgaatttggaagggttccattaaattgacaaaaagaaagatccaattcagataactgcctcaa 5858312  T
Q  112 gtttccaataatgttaggtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatgg 211  Q
    ||| ||||||  | ||||||||| |||| |||||||||||| ||| ||||||||| | |||||||||||||| | |||||||| ||||||  | ||| ||    
T  5858313 gttgccaatagagctaggtaatggtccagagaagtttgtgtcactcactctaattctatgaagagattcacttagtgagtagtttggaaatgaaccacgg 5858412  T
Q  212 agatttttgttgttaaacaagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgaggg 311  Q
    ||||||| ||||  ||| ||||||||    |||| ||||||||||||||||||     |||||||||||||||  ||| ||||||  |||||||||||||    
T  5858413 agattttcgttggaaaataagtcaatcacagacaatgttccaatctgaaagatcttctgtggaaatgtaccggataatgcacaaaatgcaagactgaggg 5858512  T
Q  312 tggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttgttag 408  Q
    | ||||||||||||||||| ||||||||||  || ||||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  5858513 tagtcaagtttttaaaatttgcaaatgtttcaggaactggggatgaaaaatagttctcatcaagaataatgactgataggttctctagttttgttag 5858609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 400
Target Start/End: Original strand, 5564956 - 5565337
Alignment:
Q  19 caagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctcaggtttcca 118  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||   |||||||||||  ||||||| |  ||||  || |||    
T  5564956 caagtaactgaggtgtgtgaggtttgacaatgaatttggaagtgttccattaaattgacaactggaaagatccaatttagataagtgcctcaatttgcca 5565055  T
Q  119 ataatgttaggtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatggagatttt 218  Q
    |||  | |||||||||||||| |||||||||||| ||| ||| ||||  | |||||||||||||| | |||||||| ||| ||  | ||||||||||| |    
T  5565056 atagagctaggtaatgctccagagaagtttgtgtaactcactataatgctatgaagagattcacttagtgagtagtctgggaatgaaccatggagattgt 5565155  T
Q  219 tgttgttaaacaagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaa 318  Q
     |||     | |||||||||   |||| |||| |||||||||| ||     |||||||||||||||||||  |||||    ||||||||||||||||||     
T  5565156 agttaaatgataagtcaataacagacaatgtttcaatctgaaaaatattttgtggaaatgtaccggtcaacccacaatctacaagactgagggtggtcag 5565255  T
Q  319 gtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagt 400  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| ||  || |||||||||||||||||||||||||||||    
T  5565256 gtttttaaaattggcaaatgtttgtggcactggggatgaaaaattattgtcaccaagaataatgactgataggttctctagt 5565337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 398
Target Start/End: Original strand, 5605283 - 5605653
Alignment:
Q  29 agttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctcaggtttccaataatgttag 128  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||||||   ||||||| |||   |||||| |  |||| ||| ||||||  | |||    
T  5605283 agttgtgtgaggtttgacaatgaattggaaagtgttccattaaattgacaactggaaagatacaattcagataagtgcctcaagttgccaatagagctag 5605382  T
Q  129 gtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaag-ccatggagatttttgttgttaa 227  Q
    ||||||||||| ||||| ||||||||||  |  ||||  | |||||||||||||| | |||||||| |||||||||  ||||| || ||   ||||| |     
T  5605383 gtaatgctccagagaagcttgtgttactcgccataatgctgtgaagagattcactaagtgagtagtctggaaaaaaaaccatgaaggttagggttgtcag 5605482  T
Q  228 acaagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaa 327  Q
    | |||||||||  ||||||||||| ||| ||||| ||     |||||||||| || |||||| |||||     |||| |||||||||| | |||||||||    
T  5605483 ataagtcaatatctgacagtgttctaatttgaaatatattttgtggaaatgttccagtcaatccacaatcgttaagattgagggtggttaggtttttaaa 5605582  T
Q  328 attggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctcta 398  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||    
T  5605583 attggcaaatgtttctggcactggggatgaaaaattgttcccatcaagaagaatgacagataagttctcta 5605653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 400
Target Start/End: Complemental strand, 5886385 - 5886017
Alignment:
Q  32 tgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaa-agtagataactttctcaggtttccaataatgttaggt 130  Q
    |||||||| ||||||| |||||| |||||||||||||  | |||||| ||||||| |||||| || || ||| ||| ||| ||| || ||| |||| ||     
T  5886385 tgtgtgagatttgacagtgaattgggaagtgttccatatagttgacagaaagaaatatccaataggag-taagtttgtcatgttaccgatattgtttgga 5886287  T
Q  131 aatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatggagatttttgttgttaaaca 230  Q
    ||||||||| ||||| |||||||||| ||||||||  | |||||| ||||||| | |||||| |  || |||||  ||||||||||   ||||| | | |    
T  5886286 aatgctccagagaagcttgtgttactcactctaatgctatgaagatattcactaagtgagtaatcagggaaaaaaacatggagattggggttgtcagata 5886187  T
Q  231 agtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaatt 330  Q
    |||||||| |||||||||||| ||| || |||||     ||||||||||| | |||||| | |||     |||| |||||||||| | ||||||||||||    
T  5886186 agtcaataattgacagtgttctaatttggaagatcttttgtggaaatgtatctgtcaatccgcaattttgaagattgagggtggttaggtttttaaaatt 5886087  T
Q  331 ggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagt 400  Q
    |||||||||||  |||||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||    
T  5886086 ggcaaatgtttgtggcactggggatgaaaaattgttctcgccaagaataatgaccgataggttctctagt 5886017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 271 - 408
Target Start/End: Complemental strand, 5583129 - 5582992
Alignment:
Q  271 tggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttccca 370  Q
    ||||||| |||| |||||| |||||   ||||||||||||||||| || ||||| ||||||| ||||||||  |||||||| ||||||||||||||||||    
T  5583129 tggaaatttaccagtcaatccacaagatgcaagactgagggtggttaattttttgaaattggaaaatgtttgtggcactggggatgaaaaattgttccca 5583030  T
Q  371 tcaagaataatgactgataggttctctagtcttgttag 408  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  5583029 tcaagaataatgactgataggttctttagtcttgttag 5582992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 5570952 - 5570785
Alignment:
Q  241 tgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaattggcaaatgtt 340  Q
    ||||| ||||||||| ||||||||     ||||||||||||| |||||| |||||   | ||||||||||||||| |  ||||||||||||| |||||||    
T  5570952 tgacaatgttccaatttgaaagatattttgtggaaatgtacctgtcaatccacaagatgaaagactgagggtggttagttttttaaaattggaaaatgtt 5570853  T
Q  341 ttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttgttag 408  Q
    |  |||||| | ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  5570852 tctggcactagggatgagaaatagttcccatcaagaataatgactgataggttctttagtcttgttag 5570785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 394
Target Start/End: Complemental strand, 5852834 - 5852682
Alignment:
Q  242 gacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaattggcaaatgttt 341  Q
    |||||||||||||||||||||||     ||||||||||||| |||||| |||||   | |||||| |||||||||| ||||| |||||| ||||||||||    
T  5852834 gacagtgttccaatctgaaagatcttctgtggaaatgtaccagtcaatccacaatctgaaagactaagggtggtcaggttttgaaaattagcaaatgttt 5852735  T
Q  342 tcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttc 394  Q
      || || || || ||||||||||||| |||||||||||||||||||||||||    
T  5852734 ctggaacgggggaagaaaaattgttcctatcaagaataatgactgataggttc 5852682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 29 - 404
Target Start/End: Complemental strand, 5895233 - 5894858
Alignment:
Q  29 agttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctcaggtttccaataatgttag 128  Q
    ||||||||||||||||||| |||||| |||||||||||||  | ||||||  |||||||||||||     |||| ||| ||| ||| || ||  |||  |    
T  5895233 agttgtgtgaggtttgacagtgaattgggaagtgttccatatagttgacagtaagaaagatccaattccaataagtttgtcatgttaccgatgttgtgtg 5895134  T
Q  129 gtaatgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatggagatttttgttgttaaa 228  Q
    | | || |||| ||||| |||||||||  | | ||||  | |||||||||||||| | |||||||| |||||||||  | ||||||||   ||||  | |    
T  5895133 gaagtggtccagagaagcttgtgttacgcaatataatgctatgaagagattcactaagtgagtagtctggaaaaaaaacttggagattggggttgccaga 5895034  T
Q  229 caagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaa 328  Q
     |||||||||  ||||||||| | ||| || |||||     |||||||||||||| ||||| ||||      |||| |||||||||| | ||||||||||    
T  5895033 taagtcaataactgacagtgtcctaatttggaagatcttttgtggaaatgtaccgatcaatccacactttcgaagattgagggtggttaggtttttaaaa 5894934  T
Q  329 ttggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttg 404  Q
    |||||||||||||  |||| ||  |||||||||||||| | || ||||||||||||||| ||||||| ||||||||    
T  5894933 ttggcaaatgtttctggcaatgaggatgaaaaattgtttcgataaagaataatgactgacaggttctgtagtcttg 5894858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 5847901 - 5847794
Alignment:
Q  301 aagactgagggtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagt 400  Q
    |||| |||||||||| | |||||||||||||||||||||||  |||||||| |||||||| |||||| || |||||| |||||| |  ||||||||||||    
T  5847901 aagattgagggtggttaggtttttaaaattggcaaatgtttgtggcactggggatgaaaagttgttctcaccaagaacaatgaccgtcaggttctctagt 5847802  T
Q  401 cttgttag 408  Q
    ||||||||    
T  5847801 cttgttag 5847794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 5553616 - 5553739
Alignment:
Q  270 gtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttccc 369  Q
    ||||||||||||| || ||| |||||   | |||||| |||||||||| ||||| |||||||||||||||||  || || || || |||||||||||||     
T  5553616 gtggaaatgtacctgttaatccacaagatgtaagactaagggtggtcaggttttgaaaattggcaaatgtttctggaacgggggaagaaaaattgttcct 5553715  T
Q  370 atcaagaataatgactgataggtt 393  Q
    ||||||||||||||| ||||||||    
T  5553716 atcaagaataatgaccgataggtt 5553739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 5539030 - 5538926
Alignment:
Q  300 caagactgagggtggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctag 399  Q
    ||||||| ||||| ||||| ||| | ||||||| ||||||||  |||||||| || ||||||||||| ||||| ||||||||||  ||||| ||||||||    
T  5539030 caagactaagggtagtcaaatttctgaaattggaaaatgtttcaggcactggggaagaaaaattgtttccatcgagaataatgatcgatagattctctag 5538931  T
Q  400 tcttg 404  Q
    |||||    
T  5538930 tcttg 5538926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 404
Target Start/End: Original strand, 5559376 - 5559550
Alignment:
Q  230 aagtcaatagttgacagtgttccaatctgaaagattgcacgtggaaatgtaccggtcaattcacaaagcgcaagactgagggtggtcaagtttttaaaat 329  Q
    |||||||||  ||||| ||||||||| || |||||   | ||||||||||| | ||||||  ||||   |||||||| ||||| ||||| ||| | ||||    
T  5559376 aagtcaataaatgacaatgttccaatttggaagatcttatgtggaaatgtatcagtcaatctacaagctgcaagactaagggttgtcaaatttctgaaat 5559475  T
Q  330 tggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagtcttg 404  Q
    ||| ||||||||  ||||| || || ||||||||||| ||||||||||||||||  ||||  |||| ||||||||    
T  5559476 tggaaaatgtttcaggcaccggggaagaaaaattgtttccatcaagaataatgatcgataaattctttagtcttg 5559550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 5853057 - 5852983
Alignment:
Q  19 caagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaa 93  Q
    ||||||||| |||| ||| |||||||| |||||||| |||||||||||||| |||||| ||  ||||||||||||    
T  5853057 caagtaacttagttctgttaggtttgaaaatgaattgggaagtgttccattaaattgagaattagaaagatccaa 5852983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 5553367 - 5553441
Alignment:
Q  19 caagtaactcagttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaa 93  Q
    ||||||||| |||| ||| |||||||| |||||||| ||||||||||||||  ||||| ||  ||||||||||||    
T  5553367 caagtaacttagttctgttaggtttgaaaatgaattgggaagtgttccattatattgagaattagaaagatccaa 5553441  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 252378 - 252329
Alignment:
Q  29 agttgtgtgaggtttgacaatgaatttggaagtgttccattgaattgaca 78  Q
    |||| ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  252378 agttttgtgaggtttgacaatgaattgggaagtgtaccattaaattgaca 252329  T

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Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 264
Target Start/End: Original strand, 1483224 - 1483456
Alignment:
Q  32 tgtgtgaggtttgacaatgaatttggaagtgttccattgaattgacaaaaagaaagatccaaagtagataactttctcaggtttccaataatgttaggta 131  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||||||  ||| |||||||||   |||||| |  ||||  || ||||||  ||| ||||    
T  1483224 tgtgtgaggttggacattgaattgggaagtgttccattaaattgacagtaaggaagatccaattcagataagtacctcaatttgccaatagagtttggta 1483323  T
Q  132 atgctccatagaagtttgtgttacttactctaattatttgaagagattcactcattgagtagtgtggaaaaaagccatggagatttttgttgttaaacaa 231  Q
    || ||||  | ||  |||||| ||| ||||||||| |  ||||||||||||| | |||||||| ||||||  | ||||| ||||  ||||||| | | ||    
T  1483324 attctcctgataaacttgtgtaactaactctaattctacgaagagattcactaagtgagtagtttggaaatgaaccatgaagatcgttgttgtaatataa 1483423  T
Q  232 gtcaatagttgacagtgttccaatctgaaagat 264  Q
    ||| |||  |||||||| | |||||||||||||    
T  1483424 gtcgataaatgacagtgctgcaatctgaaagat 1483456  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 400
Target Start/End: Original strand, 1485703 - 1485791
Alignment:
Q  312 tggtcaagtttttaaaattggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagt 400  Q
    |||||| |||||||||||||| ||||||||  || | ||| ||||||| |||||||  ||||||||||||||  | |||||||||||||    
T  1485703 tggtcaggtttttaaaattggtaaatgtttctggaattggcgatgaaagattgttcttatcaagaataatgatggttaggttctctagt 1485791  T

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Target: scaffold0454 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 400
Target Start/End: Original strand, 884 - 973
Alignment:
Q  312 tggtcaagtttttaaaatt-ggcaaatgttttcggcactggtgatgaaaaattgttcccatcaagaataatgactgataggttctctagt 400  Q
    |||||| |||||||||||| || ||||||||  || | ||| ||||||| |||||||  ||||||||||||||  | |||||||||||||    
T  884 tggtcaggtttttaaaattaggtaaatgtttctggaattggcgatgaaagattgttcttatcaagaataatgatggttaggttctctagt 973  T

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