View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18178_low_99 (Length: 307)

Name: NF18178_low_99
Description: NF18178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18178_low_99
NF18178_low_99
[»] chr1 (19 HSPs)
chr1 (159-290)||(23186196-23186327)
chr1 (19-123)||(9474872-9474976)
chr1 (19-123)||(47452316-47452420)
chr1 (19-124)||(3000318-3000423)
chr1 (19-123)||(27564731-27564835)
chr1 (19-123)||(38632317-38632421)
chr1 (19-123)||(48716278-48716382)
chr1 (13-100)||(51898673-51898760)
chr1 (23-123)||(2581915-2582015)
chr1 (19-123)||(38595154-38595258)
chr1 (13-69)||(44454033-44454089)
chr1 (19-82)||(41758846-41758909)
chr1 (19-69)||(32813301-32813351)
chr1 (19-69)||(44548372-44548422)
chr1 (19-69)||(50630512-50630562)
chr1 (18-123)||(5958995-5959100)
chr1 (19-100)||(8346384-8346465)
chr1 (19-100)||(37649221-37649302)
chr1 (23-80)||(48489343-48489400)
[»] chr2 (21 HSPs)
chr2 (19-123)||(5574484-5574588)
chr2 (13-123)||(17819994-17820104)
chr2 (12-123)||(7465724-7465835)
chr2 (19-100)||(19930816-19930897)
chr2 (13-69)||(3154197-3154253)
chr2 (19-123)||(10249378-10249482)
chr2 (19-123)||(17473020-17473124)
chr2 (19-123)||(40701478-40701582)
chr2 (13-100)||(28863478-28863565)
chr2 (13-123)||(33436090-33436200)
chr2 (23-123)||(4060685-4060785)
chr2 (19-123)||(9058480-9058584)
chr2 (19-123)||(30915463-30915567)
chr2 (23-123)||(32505648-32505748)
chr2 (19-82)||(13438384-13438447)
chr2 (19-82)||(42257234-42257297)
chr2 (13-122)||(41575138-41575248)
chr2 (18-123)||(27864704-27864809)
chr2 (19-100)||(40613898-40613979)
chr2 (13-69)||(20700869-20700925)
chr2 (19-123)||(28381651-28381755)
[»] chr7 (22 HSPs)
chr7 (12-83)||(16374813-16374884)
chr7 (13-123)||(18207180-18207289)
chr7 (19-123)||(36362026-36362130)
chr7 (13-123)||(4999504-4999614)
chr7 (13-123)||(39255914-39256023)
chr7 (13-118)||(2318233-2318338)
chr7 (19-100)||(3784018-3784099)
chr7 (50-123)||(7727906-7727979)
chr7 (19-123)||(3434562-3434666)
chr7 (19-123)||(7389389-7389493)
chr7 (19-123)||(8080379-8080483)
chr7 (19-123)||(19329842-19329946)
chr7 (19-123)||(19436183-19436287)
chr7 (19-123)||(36361909-36362013)
chr7 (19-123)||(40957707-40957811)
chr7 (19-100)||(35137556-35137637)
chr7 (19-82)||(38267081-38267144)
chr7 (19-69)||(3694421-3694471)
chr7 (57-123)||(10343597-10343663)
chr7 (19-69)||(38837271-38837321)
chr7 (18-123)||(32564421-32564526)
chr7 (19-79)||(32951489-32951549)
[»] chr5 (19 HSPs)
chr5 (13-104)||(39557507-39557598)
chr5 (23-123)||(14831814-14831914)
chr5 (19-123)||(2740274-2740378)
chr5 (19-123)||(33149634-33149738)
chr5 (19-123)||(35785199-35785303)
chr5 (19-100)||(6679721-6679802)
chr5 (19-100)||(28177798-28177879)
chr5 (13-82)||(35943882-35943951)
chr5 (19-123)||(40145407-40145511)
chr5 (13-100)||(18520874-18520961)
chr5 (13-123)||(38296203-38296313)
chr5 (16-69)||(25831339-25831392)
chr5 (14-123)||(33825315-33825424)
chr5 (13-69)||(21370058-21370114)
chr5 (18-69)||(31009042-31009093)
chr5 (20-82)||(13811693-13811755)
chr5 (19-69)||(26720570-26720620)
chr5 (19-69)||(26990319-26990369)
chr5 (19-123)||(36732938-36733042)
[»] chr8 (19 HSPs)
chr8 (13-122)||(5957831-5957940)
chr8 (19-123)||(15197333-15197437)
chr8 (19-123)||(34012292-34012396)
chr8 (14-80)||(42354579-42354645)
chr8 (19-124)||(1179936-1180041)
chr8 (19-123)||(504117-504221)
chr8 (13-100)||(37038502-37038589)
chr8 (19-100)||(14547945-14548026)
chr8 (14-123)||(17443825-17443934)
chr8 (19-100)||(40423939-40424020)
chr8 (19-123)||(12831047-12831151)
chr8 (19-123)||(23122593-23122697)
chr8 (13-80)||(15258919-15258986)
chr8 (19-82)||(43414577-43414640)
chr8 (19-69)||(9122239-9122289)
chr8 (13-82)||(8841422-8841491)
chr8 (19-100)||(10621083-10621164)
chr8 (18-82)||(10284626-10284690)
chr8 (19-123)||(44507083-44507187)
[»] chr4 (25 HSPs)
chr4 (19-124)||(41236346-41236451)
chr4 (13-123)||(29239886-29239996)
chr4 (14-123)||(29977885-29977994)
chr4 (19-123)||(11511458-11511562)
chr4 (12-123)||(29535377-29535487)
chr4 (13-123)||(50052418-50052528)
chr4 (19-123)||(6034044-6034148)
chr4 (18-100)||(3481677-3481759)
chr4 (50-123)||(50813919-50813992)
chr4 (13-69)||(18769037-18769093)
chr4 (13-69)||(28480258-28480314)
chr4 (13-69)||(28481133-28481189)
chr4 (13-69)||(28482008-28482064)
chr4 (19-123)||(48183045-48183149)
chr4 (13-92)||(48647716-48647795)
chr4 (13-100)||(50526161-50526248)
chr4 (19-69)||(29234241-29234291)
chr4 (53-123)||(32766958-32767028)
chr4 (19-69)||(42044363-42044413)
chr4 (53-123)||(55079744-55079814)
chr4 (13-82)||(23608276-23608345)
chr4 (13-42)||(47104625-47104654)
chr4 (13-82)||(56300155-56300224)
chr4 (19-123)||(480443-480547)
chr4 (13-69)||(18769163-18769219)
[»] chr3 (19 HSPs)
chr3 (21-82)||(9563040-9563101)
chr3 (14-122)||(13898046-13898154)
chr3 (19-123)||(49607414-49607518)
chr3 (14-123)||(14623830-14623939)
chr3 (13-120)||(25407137-25407245)
chr3 (19-100)||(17470428-17470509)
chr3 (19-123)||(53982011-53982115)
chr3 (19-123)||(54868891-54868995)
chr3 (13-124)||(8076392-8076503)
chr3 (13-123)||(24699944-24700054)
chr3 (19-69)||(26141528-26141578)
chr3 (13-82)||(33118841-33118910)
chr3 (19-100)||(48587087-48587168)
chr3 (20-100)||(27714888-27714968)
chr3 (19-123)||(33644200-33644304)
chr3 (19-122)||(31456690-31456793)
chr3 (13-83)||(1758446-1758516)
chr3 (14-123)||(35536626-35536735)
chr3 (19-100)||(52629323-52629404)
[»] chr6 (9 HSPs)
chr6 (14-100)||(31953021-31953107)
chr6 (19-82)||(23128123-23128186)
chr6 (14-83)||(9379703-9379772)
chr6 (19-123)||(17598554-17598658)
chr6 (19-82)||(11427659-11427722)
chr6 (19-100)||(32869701-32869782)
chr6 (14-119)||(28536479-28536582)
chr6 (13-82)||(12732523-12732592)
chr6 (19-100)||(22880654-22880735)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-98)||(152523-152603)
[»] scaffold1268 (1 HSPs)
scaffold1268 (13-100)||(919-1006)
[»] scaffold1267 (1 HSPs)
scaffold1267 (13-100)||(919-1006)
[»] scaffold0321 (1 HSPs)
scaffold0321 (19-82)||(10105-10168)


Alignment Details
Target: chr1 (Bit Score: 116; Significance: 5e-59; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 23186327 - 23186196
Alignment:
Q  159 ttctagggtccaaccaaatggagttgtatgagtagattagatgggagtattgatctcttcttctagggtggtattaagttatgagcccttccaagagaca 258  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  23186327 ttctagggtccaaccaaatggggttgtatgagtagattagatgggagtattgatctcttcttctagggtggtattaagttatgagtcctttcgagagaca 23186228  T
Q  259 tgttagatctttgtatcttaaatcttaggtat 290  Q
    ||||||||||||||||||||||||||||||||    
T  23186227 tgttagatctttgtatcttaaatcttaggtat 23186196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 9474872 - 9474976
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||||||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  9474872 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9474971  T
Q  119 tactc 123  Q
    |||||    
T  9474972 tactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 47452316 - 47452420
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| |||||| |||||||| | ||| ||||||   ||||||||||||||| |   || ||||||||||    
T  47452316 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 47452415  T
Q  119 tactc 123  Q
    |||||    
T  47452416 tactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 3000423 - 3000318
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||  ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   |||||||||||||    
T  3000423 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 3000324  T
Q  119 tactcg 124  Q
    ||||||    
T  3000323 tactcg 3000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 27564731 - 27564835
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||  ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  27564731 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 27564830  T
Q  119 tactc 123  Q
    |||||    
T  27564831 tactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 38632317 - 38632421
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    ||||| |||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||||||| || | ||||||| ||||||| |   || ||||||||||    
T  38632317 aaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcat 38632416  T
Q  119 tactc 123  Q
    |||||    
T  38632417 tactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 48716278 - 48716382
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    ||||| |||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||||||||||   ||||||| ||||||| |   || ||||||||||    
T  48716278 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 48716377  T
Q  119 tactc 123  Q
    |||||    
T  48716378 tactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 51898673 - 51898760
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| |||| |||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  51898673 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 51898760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 2582015 - 2581915
Alignment:
Q  23 agaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattact 122  Q
    |||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  123 c 123  Q
    |    
T  2581915 c 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 38595258 - 38595154
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||  ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||     |||||||||||||    
T  38595258 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcat 38595159  T
Q  119 tactc 123  Q
    |||||    
T  38595158 tactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 44454089 - 44454033
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||| |||||| |||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  44454089 gagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagattttt 44454033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 41758909 - 41758846
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||||||||| ||| |||  ||||| ||||||||||||||| | ||| ||||||    
T  41758909 aaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaa 41758846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 32813351 - 32813301
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| |||  |||||||||||||||||||||    
T  32813351 aaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagattttt 32813301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 44548372 - 44548422
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||||||||    
T  44548372 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 44548422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 50630562 - 50630512
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||||||||    
T  50630562 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 50630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 5958995 - 5959100
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatca 117  Q
    ||||||||||||||  ||||| ||| |||   ||||||| |||||||||||| | ||| |||||||| ||||||| |||| || |   ||||||||||||    
T  5958995 gaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatca 5959094  T
Q  118 ttactc 123  Q
    | ||||    
T  5959095 taactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 8346384 - 8346465
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| |||||  || ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  8346384 aaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 8346465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 37649302 - 37649221
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| ||||||||| ||||| || || | |||||||||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  37649302 aaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 37649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 48489400 - 48489343
Alignment:
Q  23 agaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtc 80  Q
    ||||| |||| ||||| ||||||| ||||||||| |||||||||||| | ||||||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 5574484 - 5574588
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||||| ||| ||||||   ||||||| ||||||| ||  || ||||||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 5574583  T
Q  119 tactc 123  Q
    |||||    
T  5574584 tactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 17819994 - 17820104
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||| |||||||||||| | ||| |||||||  ||||||| ||||||||  | || ||||    
T  17819994 gagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatg 17820093  T
Q  113 tatcattactc 123  Q
    |||||| ||||    
T  17820094 tatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 7465724 - 7465835
Alignment:
Q  12 agagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttat 111  Q
    |||||| |||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||| ||| |   || |||    
T  7465724 agagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctat 7465823  T
Q  112 gtatcattactc 123  Q
    ||||||||||||    
T  7465824 gtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 19930816 - 19930897
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||||||||| ||| ||| | |||| ||||||||||||||| | ||||||||||   ||||||| |||||||    
T  19930816 aaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 19930897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 3154253 - 3154197
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    ||||||||||||||| |||||||| | |||||||  |||||||||||||||||||||    
T  3154253 gagatgaaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagattttt 3154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10249378 - 10249482
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| |||||| | |||||||  |||||| |   || ||||||||||    
T  10249378 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 10249477  T
Q  119 tactc 123  Q
    |||||    
T  10249478 tactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 17473124 - 17473020
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||| ||| |   || ||||||||||    
T  17473124 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 17473025  T
Q  119 tactc 123  Q
    |||||    
T  17473024 tactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 40701582 - 40701478
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| ||| || ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  40701582 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 40701483  T
Q  119 tactc 123  Q
    |||||    
T  40701482 tactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 28863565 - 28863478
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||| |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  28863565 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 28863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 33436090 - 33436200
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||| ||||| ||| ||| |||||| |||||| |||||||| | ||| ||||||   ||||||| ||||||| |   || ||||    
T  33436090 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatg 33436189  T
Q  113 tatcattactc 123  Q
    |||||||||||    
T  33436190 tatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 4060785 - 4060685
Alignment:
Q  23 agaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattact 122  Q
    |||||||||| || || ||||||| ||| || ||||||||||||||| | |||||||||| | |||||||  |||||| |   || ||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 4060686  T
Q  123 c 123  Q
    |    
T  4060685 c 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 9058584 - 9058480
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| | |||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  9058584 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9058485  T
Q  119 tactc 123  Q
    |||||    
T  9058484 tactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 30915567 - 30915463
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||  ||| ||| |||||| ||||||||||||||||| |||  |||||   ||||||| ||||||| |   || ||||||||||    
T  30915567 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcat 30915468  T
Q  119 tactc 123  Q
    |||||    
T  30915467 tactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 32505648 - 32505748
Alignment:
Q  23 agaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattact 122  Q
    |||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| |||||| | |||||||  |||||| |   || ||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  123 c 123  Q
    |    
T  32505748 c 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 13438447 - 13438384
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||    
T  13438447 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 13438384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 42257297 - 42257234
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||| ||| |||  ||| ||||||||||||||||||| ||| ||||||    
T  42257297 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaa 42257234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 41575248 - 41575138
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgt-gggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttat 111  Q
    |||||||||||||||||||| |||||| ||| ||| | ||||||| ||||| |||||| | || |||||||   ||||||||||| ||| |   || |||    
T  41575248 gagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctat 41575149  T
Q  112 gtatcattact 122  Q
    |||||||||||    
T  41575148 gtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 27864809 - 27864704
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatca 117  Q
    ||||||||||||||| || || ||| ||| |||||  ||||||||||||||| | ||||||||||   ||||||| |||| || |   || |||||||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatca 27864710  T
Q  118 ttactc 123  Q
    ||||||    
T  27864709 ttactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40613898 - 40613979
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||| |||  ||| ||||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  40613898 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 40613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 20700925 - 20700869
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||| ||||||||||||||| || || ||| ||| |||||| |||||||||||||||    
T  20700925 gagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagattttt 20700869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 28381651 - 28381755
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||  |||  ||||| ||||||||||||||| | ||| |||| | | ||||||| ||||||| |   || ||||||||||    
T  28381651 aaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcat 28381750  T
Q  119 tactc 123  Q
    |||||    
T  28381751 tactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 16374813 - 16374884
Alignment:
Q  12 agagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaag 83  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||||| | |||||||||||    
T  16374813 agagatgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaag 16374884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 18207289 - 18207180
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||||||||||||||||||| ||||||||| | | |||| |||||||| |||||||| ||||| |||||||| ||||||| ||||||| | | || ||||    
T  18207289 gagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatg 18207191  T
Q  113 tatcattactc 123  Q
    |||||| ||||    
T  18207190 tatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 36362130 - 36362026
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||| ||||||    |||||||||||||| |   || ||||||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcat 36362031  T
Q  119 tactc 123  Q
    |||||    
T  36362030 tactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 4999504 - 4999614
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    ||||| |||||||||||||||||||| ||| ||| |||||| |||| |||||||||| | ||| |||||| | ||||||| ||| ||| |   || ||||    
T  4999504 gagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatg 4999603  T
Q  113 tatcattactc 123  Q
    |||||||||||    
T  4999604 tatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 39255914 - 39256023
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||||||||||||||||||  ||||||||  ||| |||| ||||||||||||||||| ||||| | |||||  ||||||| ||||||| | | || ||||    
T  39255914 gagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatg 39256012  T
Q  113 tatcattactc 123  Q
    |||||| ||||    
T  39256013 tatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 2318233 - 2318338
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    ||||||||||||||||| || || ||| || ||| |||||||||  ||||||||||| | ||| |||||||| |||| || ||||||||| | ||| |||    
T  2318233 gagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatg 2318332  T
Q  113 tatcat 118  Q
    ||||||    
T  2318333 tatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3784099 - 3784018
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| |||||| |  |||||| |||||||    
T  3784099 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccaccta 3784018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 7727979 - 7727906
Alignment:
Q  50 tgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattactc 123  Q
    ||||||| |||||||||||||| || ||||||||| ||||||||||||||| |   ||||||||||||| ||||    
T  7727979 tgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 3434666 - 3434562
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||| ||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 3434567  T
Q  119 tactc 123  Q
    |||||    
T  3434566 tactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 7389493 - 7389389
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  7389493 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 7389394  T
Q  119 tactc 123  Q
    |||||    
T  7389393 tactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 8080379 - 8080483
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||||| | | ||||||   ||||||| ||||||| |   || ||||||||||    
T  8080379 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 8080478  T
Q  119 tactc 123  Q
    |||||    
T  8080479 tactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 19329946 - 19329842
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||  ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  19329946 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 19329847  T
Q  119 tactc 123  Q
    |||||    
T  19329846 tactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 19436183 - 19436287
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| || || ||||||| |||||| ||||||||||||||| | ||| |||||| | |||||||  |||||| |   || ||||||||||    
T  19436183 aaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcat 19436282  T
Q  119 tactc 123  Q
    |||||    
T  19436283 tactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 36361909 - 36362013
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||| ||||||    |||||| ||||||| |   || ||||||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 36362008  T
Q  119 tactc 123  Q
    |||||    
T  36362009 tactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 40957811 - 40957707
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||  ||||||| |||||| ||||||||||||||| | ||| | ||||   ||||||| ||||||| ||  || ||||||||||    
T  40957811 aaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcat 40957712  T
Q  119 tactc 123  Q
    |||||    
T  40957711 tactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35137637 - 35137556
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||||||||| ||| ||| |||||| |||||| |||||||| | ||| ||||||   ||||||| |||||||    
T  35137637 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccaccta 35137556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 38267144 - 38267081
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||    
T  38267144 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 38267081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 3694471 - 3694421
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||||||| | |||| |||||||||||||||    
T  3694471 aaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagattttt 3694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  57 gtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattactc 123  Q
    ||||||||||||| | ||| |||||||||||||||| ||||||| |   || |||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 38837321 - 38837271
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||||||||    
T  38837321 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 38837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 32564421 - 32564526
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatca 117  Q
    |||||||||||||| |||||| ||| |||   |  |||| |||||||||||| | ||| |||||||  ||||||| ||||||| ||  ||||||||||||    
T  32564421 gaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatca 32564520  T
Q  118 ttactc 123  Q
    | ||||    
T  32564521 taactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 32951489 - 32951549
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgt 79  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||| |||||||| | |||||||    
T  32951489 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgt 32951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 39557507 - 39557598
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgat 104  Q
    ||||| |||||||||||||| |||| |||| |||  |||| |||||||||||||||| | ||||||| |||| |||||||||||||||||||    
T  39557507 gagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccacctatgat 39557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 14831914 - 14831814
Alignment:
Q  23 agaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattact 122  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||||||| ||| ||||||   ||||||| ||||||| ||  || ||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattact 14831815  T
Q  123 c 123  Q
    |    
T  14831814 c 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 2740378 - 2740274
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  2740378 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 2740279  T
Q  119 tactc 123  Q
    |||||    
T  2740278 tactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 33149634 - 33149738
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| |||||||| |||||| | ||| ||||||   ||||||||||||||| |   || ||||||||||    
T  33149634 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 33149733  T
Q  119 tactc 123  Q
    |||||    
T  33149734 tactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 35785303 - 35785199
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| ||| || ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  35785303 aaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 35785204  T
Q  119 tactc 123  Q
    |||||    
T  35785203 tactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6679802 - 6679721
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||||||| |||||||||| ||| |||  ||||||||||||||||||||| | ||| |||||| | ||||||| |||||||    
T  6679802 aaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 6679721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 28177879 - 28177798
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||||||||| ||| |||  ||||||||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  28177879 aaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 28177798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 35943882 - 35943951
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||| ||||||||||||||| ||||||||||||| ||| || ||||||||||||||| | ||| ||||||    
T  35943882 gagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaa 35943951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 40145511 - 40145407
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||||||| ||   ||||||| ||||||| |   || ||||||||||    
T  40145511 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcat 40145412  T
Q  119 tactc 123  Q
    |||||    
T  40145411 tactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 18520874 - 18520961
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||| |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  18520874 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 18520961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 38296313 - 38296203
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||||||| ||||||||||| |||||| |||||| |||  | ||||||| ||||||| | ||| | | |||| |||||||  |||||| |||||| ||||    
T  38296313 gagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatg 38296214  T
Q  113 tatcattactc 123  Q
    |||||| ||||    
T  38296213 tatcataactc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 25831392 - 25831339
Alignment:
Q  16 atgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||| |||||||||||||| ||| | ||||||||||| ||||||||    
T  25831392 atgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagattttt 25831339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 33825315 - 33825424
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    |||| |||||||||||||| ||||||  | | | | ||| |||||||||||||||||| ||| |||||||  ||||||| ||||||| ||  || ||||     
T  33825315 agataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgc 33825414  T
Q  114 atcattactc 123  Q
    ||||||||||    
T  33825415 atcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 21370114 - 21370058
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||| |||||||||| |||||||||| ||| ||| ||||||||| ||||||||||||    
T  21370114 gagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagattttt 21370058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 31009093 - 31009042
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||| |||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  31009093 gaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt 31009042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 13811755 - 13811693
Alignment:
Q  20 aagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    ||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 13811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 26720620 - 26720570
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| |||||||  ||| |||||||||||||||||    
T  26720620 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagattttt 26720570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 26990369 - 26990319
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| |||||||  ||| |||||||||||||||||    
T  26990369 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagattttt 26990319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 36732938 - 36733042
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| | ||||||||||||| | ||| ||||||   ||||||| | ||||| |   || ||||||||||    
T  36732938 aaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcat 36733037  T
Q  119 tactc 123  Q
    |||||    
T  36733038 tactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 5957940 - 5957831
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| ||  || ||||    
T  5957940 gagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatg 5957841  T
Q  113 tatcattact 122  Q
    ||||||||||    
T  5957840 tatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 15197437 - 15197333
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| ||  || ||||||||||    
T  15197437 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 15197338  T
Q  119 tactc 123  Q
    |||||    
T  15197337 tactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 34012292 - 34012396
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| |||||||| |||||| | ||| ||||||   ||||||||||||||| |   || ||||||||||    
T  34012292 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 34012391  T
Q  119 tactc 123  Q
    |||||    
T  34012392 tactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 42354579 - 42354645
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtc 80  Q
    ||||||||||||||||||| || |||| ||||| | ||| ||||||||||||||||||| |||||||    
T  42354579 agatgaaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagatttttataaggatgtc 42354645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 1179936 - 1180041
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| || |||| | |||| ||||||||||||||| | ||| ||||||   ||||||||||||||| |   || ||||||||||    
T  1179936 aaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 1180035  T
Q  119 tactcg 124  Q
    ||||||    
T  1180036 tactcg 1180041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 504117 - 504221
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||| ||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  504117 aaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 504216  T
Q  119 tactc 123  Q
    |||||    
T  504217 tactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 37038589 - 37038502
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| |||| |||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  37038589 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 37038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 14548026 - 14547945
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  14548026 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 14547945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 17443934 - 17443825
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    |||||||||||||||||| |||||||||| ||| | |||| || |||||||||||| | ||  ||| |||| |||||||  |||||| | | || |||||    
T  17443934 agatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgt 17443835  T
Q  114 atcattactc 123  Q
    ||||| ||||    
T  17443834 atcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40423939 - 40424020
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||| ||| | |||| ||||||||||||||| | ||||||||||   ||||||| |||||||    
T  40423939 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 40424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 12831151 - 12831047
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   |||||||  |||||| |   || ||||||||||    
T  12831151 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 12831052  T
Q  119 tactc 123  Q
    |||||    
T  12831051 tactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 23122593 - 23122697
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| || || ||| ||| |||||| ||||||||||||||| | ||| |||||| | ||||||| |||| || |   || ||||||||||    
T  23122593 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcat 23122692  T
Q  119 tactc 123  Q
    |||||    
T  23122693 tactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 15258919 - 15258986
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtc 80  Q
    |||| |||||||||| |||| |||||  || ||| ||||||||| |||||||||||||| ||||||||    
T  15258919 gagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtc 15258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 43414577 - 43414640
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||| |||||||  |||||||||||| |||||||| | ||| ||||||    
T  43414577 aaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaa 43414640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9122289 - 9122239
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||||||| |||||| || ||||||||||||    
T  9122289 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagattttt 9122239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8841422 - 8841491
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||| ||||||||||||||| ||||| ||| ||| |||||| |||||| |||||||| | ||| ||||||    
T  8841422 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa 8841491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10621083 - 10621164
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||||||   ||| | ||||||||||||||| | ||| ||||||   |||||||||||||||    
T  10621083 aaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 10621164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 10284626 - 10284690
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    ||||||||||||||| ||||| ||| ||| |||||| |||||||| |||||| | ||| ||||||    
T  10284626 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaa 10284690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 44507083 - 44507187
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    ||||||||||| || ||||  ||| ||| |||||| ||||||||||||||| | ||| ||| ||   ||||||||||||||| |   || ||||||||||    
T  44507083 aaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcat 44507182  T
Q  119 tactc 123  Q
    |||||    
T  44507183 tactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 41236451 - 41236346
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | |||||||||| | ||||||| ||||||| |   || ||||||||||    
T  41236451 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 41236352  T
Q  119 tactcg 124  Q
    ||||||    
T  41236351 tactcg 41236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 29239996 - 29239886
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||| ||||||||| ||| |||||| |||||| |||||||| | ||||||||||   ||||||| ||||||| |   || ||||    
T  29239996 gagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatg 29239897  T
Q  113 tatcattactc 123  Q
    |||||||||||    
T  29239896 tatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 29977994 - 29977885
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    ||||||||||||||||||| ||||||||| |||   |||| ||||||||||||||| | ||| ||| |||  ||||||| ||||||||| |  | |||||    
T  29977994 agatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgt 29977895  T
Q  114 atcattactc 123  Q
    ||||||||||    
T  29977894 atcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 11511458 - 11511562
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||||| ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  11511458 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11511557  T
Q  119 tactc 123  Q
    |||||    
T  11511558 tactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 29535487 - 29535377
Alignment:
Q  12 agagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttat 111  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| ||| || |||||| | |||||  |||||  ||||||  |||||| ||| || |||    
T  29535487 agagatgaaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacctaagattgtctat 29535389  T
Q  112 gtatcattactc 123  Q
    ||||||| ||||    
T  29535388 gtatcataactc 29535377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 50052418 - 50052528
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||    
T  50052418 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 50052517  T
Q  113 tatcattactc 123  Q
    |||||||||||    
T  50052518 tatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 6034148 - 6034044
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||||||| |||||| || |||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  6034148 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 6034049  T
Q  119 tactc 123  Q
    |||||    
T  6034048 tactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 3481759 - 3481677
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||||||||||||| ||||||||| ||| |||||| | ||||||||||||| | ||| ||||||   ||||||| |||||||    
T  3481759 gaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 3481677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 50813919 - 50813992
Alignment:
Q  50 tgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattactc 123  Q
    ||||||| |||||||||||| | ||| |||||||  ||||||||||||||| ||  ||||||||||||| ||||    
T  50813919 tgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 18769037 - 18769093
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    ||||||||||||||| ||||||||||||||||   | ||||||| ||||||||||||    
T  18769037 gagatgaaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagattttt 18769093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 28480258 - 28480314
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||| ||||||||||||||||||||| ||| | |||| || ||||||||||||    
T  28480258 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagattttt 28480314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 28481133 - 28481189
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||| ||||||||||||||||||||| ||| | |||| || ||||||||||||    
T  28481133 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagattttt 28481189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 28482008 - 28482064
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||| ||||||||||||||||||||| ||| | |||| || ||||||||||||    
T  28482008 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagattttt 28482064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 48183045 - 48183149
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||| || |   || ||||||||||    
T  48183045 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcat 48183144  T
Q  119 tactc 123  Q
    |||||    
T  48183145 tactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 48647716 - 48647795
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtatt 92  Q
    |||| |||||||||| |||| ||||| ||  ||| ||||||||||||| |||||||||| ||| ||| |||| |||||||    
T  48647716 gagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtatt 48647795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 50526161 - 50526248
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| |||| |||||| ||| ||||| || |||| |||||||||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  50526161 gagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 50526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 29234241 - 29234291
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||||||||    
T  29234241 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 29234291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 32767028 - 32766958
Alignment:
Q  53 ccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattactc 123  Q
    |||| |||||||||||| ||||| |||||||  ||||||| ||||||| ||  ||||||||||||| ||||    
T  32767028 ccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 42044363 - 42044413
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||||||||    
T  42044363 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 42044413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 55079744 - 55079814
Alignment:
Q  53 ccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcattactc 123  Q
    |||| |||||||||||| ||||| |||||||| ||||||| ||||||| |   ||||||||||||| ||||    
T  55079744 ccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 23608345 - 23608276
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    ||||| |||||||||||||| ||||||||  | | |||||| ||||||||||||||| | ||| ||||||    
T  23608345 gagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaa 23608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 47104654 - 47104625
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtggg 42  Q
    ||||||||||||||||||||||||||||||    
T  47104654 gagatgaaagagaaagtgtgtttgtgtggg 47104625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 56300155 - 56300224
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||| |||||||||||||||||||||  |||| |   ||||||| |||||||||||| | ||||||||||    
T  56300155 gagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaa 56300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 480443 - 480547
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||  ||| ||| |||||| ||||||||||||||| | ||| ||||||   |||||||  |||||| |   || ||||||||||    
T  480443 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 480542  T
Q  119 tactc 123  Q
    |||||    
T  480543 tactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 18769219 - 18769163
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    ||||||||||||||| ||| |||||||||| |   | ||||||||||||||||||||    
T  18769219 gagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagattttt 18769163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 9563101 - 9563040
Alignment:
Q  21 agagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    ||||||||||||||||||  |||||| |||||| ||||||||||||||||||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaa 9563040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 13898046 - 13898154
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    ||||||||||||||||||| ||||||| | ||| | ||| |||||||||||||||||| ||| |||||||  ||||||| ||||||| |   |||||| |    
T  13898046 agatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatct 13898145  T
Q  114 atcattact 122  Q
    |||||||||    
T  13898146 atcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 49607518 - 49607414
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  49607518 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 49607419  T
Q  119 tactc 123  Q
    |||||    
T  49607418 tactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 14623830 - 14623939
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    ||||||||||||||||||| ||||||| | ||| | ||| ||| |||||||||||||| ||| |||||||  ||||||| ||||||| |   || |||||    
T  14623830 agatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgt 14623929  T
Q  114 atcattactc 123  Q
    ||||||||||    
T  14623930 atcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 25407137 - 25407245
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttta-tatggatgtcaagatgtgtattaccacctatgatagtttat 111  Q
    ||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||  | ||  |||||||  || |||| ||||||||| | || |||    
T  25407137 gagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtat 25407236  T
Q  112 gtatcatta 120  Q
    |||||||||    
T  25407237 gtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17470509 - 17470428
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||||||||| | ||| ||| || | ||||||| |||||||    
T  17470509 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccaccta 17470428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 53982115 - 53982011
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||||| |   || ||||||||||    
T  53982115 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 53982016  T
Q  119 tactc 123  Q
    |||||    
T  53982015 tactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 54868891 - 54868995
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| ||| || ||||||||||||||| | ||| |||||| | ||||||| ||||||| |   || ||||||||||    
T  54868891 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 54868990  T
Q  119 tactc 123  Q
    |||||    
T  54868991 tactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 8076503 - 8076392
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||| ||||| ||| ||| |||||| |||||| |||||||| | ||| ||||||   ||||| | ||||||| |   |||||||    
T  8076503 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatg 8076404  T
Q  113 tatcattactcg 124  Q
    ||||||||||||    
T  8076403 tatcattactcg 8076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 24699944 - 24700054
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatg 112  Q
    |||| ||||||||||||||||||||   || ||| |||| ||||||| ||||||||||| ||| |||||| | ||||||| ||| ||| |   || ||||    
T  24699944 gagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatg 24700043  T
Q  113 tatcattactc 123  Q
    |||||||||||    
T  24700044 tatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26141528 - 26141578
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagattttt 69  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  26141528 aaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagattttt 26141578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 33118841 - 33118910
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||| |||||||||||||||||| || ||||||| |||||| |||||||| |||||| | ||| ||||||    
T  33118841 gagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaa 33118910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 48587087 - 48587168
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||  ||||| ||||||| |||||| ||||||||||||||||| | | ||||||   ||||||| |||||||    
T  48587087 aaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccaccta 48587168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 27714888 - 27714968
Alignment:
Q  20 aagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||||||||||| ||||| ||| ||| | |||| ||||||||||||||| | ||| ||||||   |||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 27714968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 33644304 - 33644200
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| ||||| | |   || ||||||||||    
T  33644304 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcat 33644205  T
Q  119 tactc 123  Q
    |||||    
T  33644204 tactc 33644200  T

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Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 31456793 - 31456690
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| | |||| ||||||||||||||| | ||| ||||||   ||||||| || ||||||   || ||||||||||    
T  31456793 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T
Q  119 tact 122  Q
    ||||    
T  31456693 tact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 1758446 - 1758516
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaag 83  Q
    ||||||||||||||| |||||||||||||  ||| ||| ||||  |||||||||||| | ||| |||||||    
T  1758446 gagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaag 1758516  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 35536735 - 35536626
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    ||||||||||| ||||||| ||||||  | ||| | ||||||||||||| |||||||| ||| ||||||   ||||||| |||| || |   || |||||    
T  35536735 agatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgt 35536636  T
Q  114 atcattactc 123  Q
    ||||||||||    
T  35536635 atcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 52629404 - 52629323
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||  ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  52629404 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 52629323  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 31953021 - 31953107
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    ||||||||||||||||||||||||||| | ||| | ||| ||| |||||||||||||| ||| |||||||  ||||||| |||||||    
T  31953021 agatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 31953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 23128123 - 23128186
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||| | ||| ||||||    
T  23128123 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa 23128186  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 9379703 - 9379772
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaag 83  Q
    |||||||||||||| |||||||||||| ||||| | || |||||||||| |||||| ||||| |||||||    
T  9379703 agatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaag 9379772  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 17598658 - 17598554
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgtatcat 118  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| |||||| |  |||||| ||||||| |   || ||||||||||    
T  17598658 aaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 17598559  T
Q  119 tactc 123  Q
    |||||    
T  17598558 tactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 11427722 - 11427659
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | ||| ||||||    
T  11427722 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa 11427659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32869782 - 32869701
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||| ||| |||||| ||||||||||||||| | ||| ||||||   ||||||| |||||||    
T  32869782 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 32869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 28536479 - 28536582
Alignment:
Q  14 agatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacctatgatagtttatgt 113  Q
    |||| |||||||||||||| ||||||||| ||| | ||||  |||||||||||||| | ||| |||||||   |||||| ||||||| |   ||||||||    
T  28536479 agataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgt 28536576  T
Q  114 atcatt 119  Q
    ||||||    
T  28536577 atcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 12732592 - 12732523
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    ||||||||||||||| |||| || |||||||||| | |  ||||||||||||||||| | ||| ||||||    
T  12732592 gagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaa 12732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 22880654 - 22880735
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||||||||||||| ||||| ||| ||| |||||| |||||||||| |||| | ||| ||||||   ||||||| |||||||    
T  22880654 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccaccta 22880735  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 152603 - 152523
Alignment:
Q  18 gaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccacc 98  Q
    |||||||||||||| |||||| |||||||   ||||||| |||||||||||| | ||| |||||||  ||||||| |||||    
T  152603 gaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacc 152523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 919 - 1006
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| ||||||||||||||| ||||| ||||| | |||||| ||||||||| ||||| | ||||||| ||   ||||||| |||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 919 - 1006
Alignment:
Q  13 gagatgaaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaagatgtgtattaccaccta 100  Q
    |||| ||||||||||||||| ||||| ||||| | |||||| ||||||||| ||||| | ||||||| ||   ||||||| |||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 10105 - 10168
Alignment:
Q  19 aaagagaaagtgtgtttgtgtgggatcctcgtgaccacgtgtcagatttttatatggatgtcaa 82  Q
    |||||||||||||| ||||  | | ||| |||||| ||||||||||||||||| ||||||||||    
T  10105 aaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaa 10168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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