View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18180_high_5 (Length: 263)
Name: NF18180_high_5
Description: NF18180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18180_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 36530582 - 36530812
Alignment:
| Q |
16 |
aattattgggttgatttgcttagctggaattgttggtatgtgacatgagaatttattcaattcaattacacatcattttaatcacgcttttggaaattga |
115 |
Q |
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| T |
36530582 |
aattattgggttgatttgcttagctggaattgttggtatgtgacatgagagtttattcaattcaattacacatcattttaatcacgcttttggaaattga |
36530681 |
T |
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| Q |
116 |
aaccctagcccgtgttggtatcacggtgtgataccataatcacgtcgttgtgattatgacatatccaccgtgataccataccaagtttcaacatatgaaa |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
36530682 |
aaccctagcccgtgttggtatcacggtgtgataccataatcacgtcgttgtgattatgacatatccaccttgataccataccaagtttcaacatatgaaa |
36530781 |
T |
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| Q |
216 |
aatgaaaccacgtgttttgagcattgaaaat |
246 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
36530782 |
aatgaaaccacgtgttttgagcattgaaaat |
36530812 |
T |
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