View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18181_low_10 (Length: 280)
Name: NF18181_low_10
Description: NF18181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18181_low_10 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 263
Target Start/End: Original strand, 37428339 - 37428590
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428339 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
37428438 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
|||||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428439 |
ggcaagggaccactaaaaattttattatagatgtcgaaaattctcaacttggg-aatggatgtttggtcatagaacaagtgattgtaccatgcagtttat |
37428537 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaaaaagtatttgatgcatgaagttgttgtt |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428538 |
ttgatcttaaaatgagaacctgtaaaaagtatttgatgcatgaagttgttgtt |
37428590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 37383199 - 37382975
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||||| | | | |||||||||||||||||||||||||||||| ||||||| | ||| |
|
|
| T |
37383199 |
cacagaatcattatagtaattggacttacccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaaattcttgatgcacgatgtt |
37383100 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||| || |||||||||||||||||||||||||| ||||| |||| || ||||||| ||||| ||||||| |
|
|
| T |
37383099 |
ggcaagggcccaataaaattgttgttagagacatcaaaaattctcaacttgggaaatggatgtttggtgctagagcatgtgattgcgccatgaagtttat |
37383000 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
||||||||||| |||| |||||||| |
|
|
| T |
37382999 |
ttgatcttaaactgagcacctgtaa |
37382975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 37434997 - 37435221
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||| ||| |
|
|
| T |
37434997 |
cacagaatcattatagtaattgttcttacccatgtattgcaaaccaatctggctatcattcacattcatcattccttgaaagttcttgatacatgatgtt |
37435096 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
||||||| ||||||||||||||| ||||||| |||||||| ||||| | ||| ||||| ||||| ||||||| ||||||| ||||| ||||||| |
|
|
| T |
37435097 |
ggcaaggatccactaaaattgttaccgaagatgtcaaaaattcttaacttagaaaaaggatggttggtgttagaacaggtgattgaaccattaagtttat |
37435196 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
||||||||||| |||| |||||||| |
|
|
| T |
37435197 |
ttgatcttaaactgagtacctgtaa |
37435221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 37593492 - 37593696
Alignment:
| Q |
12 |
acagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcg |
111 |
Q |
| |
|
||||||||||||||||||| || |||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||| | |
|
|
| T |
37593492 |
acagaatcattatagtaataacccacacccttgtattgcaaaccaatttggctgtcattcacattcatcattccttgaaagttcttgatgcatgatgttg |
37593591 |
T |
 |
| Q |
112 |
gcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatt |
211 |
Q |
| |
|
||||||| |||||||||||||| |||| | || |||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || ||||| |
|
|
| T |
37593592 |
gcaagggcccactaaaattgttgatagaaacatcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatt |
37593691 |
T |
 |
| Q |
212 |
tgatc |
216 |
Q |
| |
|
||||| |
|
|
| T |
37593692 |
tgatc |
37593696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 37695883 - 37696087
Alignment:
| Q |
12 |
acagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcg |
111 |
Q |
| |
|
||||||||||||||||||| | | |||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||| | |
|
|
| T |
37695883 |
acagaatcattatagtaataaccgtcacccttgtattgcaaaccaatttggctgtcattcacattcatcattccttgaaagttcttgatgcatgatgttg |
37695982 |
T |
 |
| Q |
112 |
gcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatt |
211 |
Q |
| |
|
||||||| |||||||||||||| |||| | || |||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || ||||| |
|
|
| T |
37695983 |
gcaagggcccactaaaattgttgatagaaacatcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattatt |
37696082 |
T |
 |
| Q |
212 |
tgatc |
216 |
Q |
| |
|
||||| |
|
|
| T |
37696083 |
tgatc |
37696087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 37532387 - 37532592
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
|||||||||||||||||||| || |||| |||| ||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||| | | |
|
|
| T |
37532387 |
cacagaatcattatagtaataacccgcacccttgtattgcaaaccaatttggctgtcattcacattcatcattcctttaaagttcttgatgcatgatatt |
37532486 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
|||||||| |||||||||||||| ||||| | || |||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || |||| |
|
|
| T |
37532487 |
ggcaagggcccactaaaattgttgttagaaacatcaaaaattctcaacttaggaaatgaatgcttggtgctagaacaagtgattgcaccatgaagattat |
37532586 |
T |
 |
| Q |
211 |
ttgatc |
216 |
Q |
| |
|
|||||| |
|
|
| T |
37532587 |
ttgatc |
37532592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 37823192 - 37823401
Alignment:
| Q |
12 |
acagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcg |
111 |
Q |
| |
|
||||||||||| ||||||| | | ||||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||| | |
|
|
| T |
37823192 |
acagaatcattgtagtaataagagtcacccatgtattgcaaaccaatttggtcgtcactcacattcatcattccttgaaagttcttgatgcatgatgttg |
37823291 |
T |
 |
| Q |
112 |
gcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatt |
211 |
Q |
| |
|
||||||| |||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| || ||||| |
|
|
| T |
37823292 |
gcaagggcccactaaaattgttgttagagacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatt |
37823391 |
T |
 |
| Q |
212 |
tgatcttaaa |
221 |
Q |
| |
|
||||| |||| |
|
|
| T |
37823392 |
tgatcgtaaa |
37823401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 37401870 - 37401661
Alignment:
| Q |
12 |
acagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcg |
111 |
Q |
| |
|
||||||||||| ||||||| | | ||||||||| ||||||||| | | | |||||||||||||||||||||||||| ||| ||||||||| ||| | |
|
|
| T |
37401870 |
acagaatcattgtagtaataagagtcacccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaagttcttgatgcatgatgttg |
37401771 |
T |
 |
| Q |
112 |
gcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatt |
211 |
Q |
| |
|
||||||| |||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| || ||||| |
|
|
| T |
37401770 |
gcaagggcccactaaaattgttgttagagacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatt |
37401671 |
T |
 |
| Q |
212 |
tgatcttaaa |
221 |
Q |
| |
|
||||| |||| |
|
|
| T |
37401670 |
tgatcgtaaa |
37401661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 37639034 - 37639243
Alignment:
| Q |
12 |
acagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcg |
111 |
Q |
| |
|
||||||||||| ||||||| | | ||||||||| ||||||||| | | | |||||||||||||||||||||||||| ||| ||||||||| ||| | |
|
|
| T |
37639034 |
acagaatcattgtagtaataagagtcacccatgtattgcaaaccagtgttattgtcattcacattcatcattccttgaaagttcttgatgcatgatgttg |
37639133 |
T |
 |
| Q |
112 |
gcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatt |
211 |
Q |
| |
|
||||||| |||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| || ||||| |
|
|
| T |
37639134 |
gcaagggcccactaaaattgttgttagagacatcaaaaattctcaacttgggaaatgtatgcttggtgctagaacaggtgattgcaccatgaagattatt |
37639233 |
T |
 |
| Q |
212 |
tgatcttaaa |
221 |
Q |
| |
|
||||| |||| |
|
|
| T |
37639234 |
tgatcgtaaa |
37639243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 31 - 235
Target Start/End: Complemental strand, 37393730 - 37393526
Alignment:
| Q |
31 |
tggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcggcaagggaccactaaaatt |
130 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||| ||| ||| ||||| ||| |||||||| ||||||||||| |
|
|
| T |
37393730 |
tggctttacccatgtattgcaaaccaatttggctgttattcacatccatcattccttgaaagttcttgaagcatgatgttggcaaggggccactaaaatt |
37393631 |
T |
 |
| Q |
131 |
gttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatttgatcttaaaatgagaacc |
230 |
Q |
| |
|
|||| |||||| || ||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||| || | |||||||| |||| | || ||| |
|
|
| T |
37393630 |
gttactagagacatcataaattctcaacttaggaaatggatgcttggtgctagaacatgtgattgacccatgaagatgatttgatcgtaaacttagcacc |
37393531 |
T |
 |
| Q |
231 |
tgtaa |
235 |
Q |
| |
|
||||| |
|
|
| T |
37393530 |
tgtaa |
37393526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 37710846 - 37711001
Alignment:
| Q |
66 |
tcattcacattcatcattccttgaaaattcctgatgcatgttgtcggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaa |
165 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| ||||||||| || |||||||| |||||||||||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
37710846 |
tcattcaccttcatcattccttgaaagttcttgatgcatgatgctggcaagggcccactaaaattgttgttagagacatcaaaaattctcaacttgggaa |
37710945 |
T |
 |
| Q |
166 |
atggatgcttggtcatagaacaagtgattgtaccatgcagtttatttgatcttaaa |
221 |
Q |
| |
|
||| ||||||||| ||||||| ||||||| |||||| || |||||||||| |||| |
|
|
| T |
37710946 |
atgtatgcttggtgctagaacaggtgattgcaccatgaagattatttgatcgtaaa |
37711001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 37702025 - 37702194
Alignment:
| Q |
66 |
tcattcacattcatcattccttgaaaattcctgatgcatgttgtcggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaa |
165 |
Q |
| |
|
||||| ||||| |||||||||||||| ||| ||||||||| ||| |||||||| |||||||||||||| |||||| || |||||||||||||| |||| |
|
|
| T |
37702025 |
tcatttacattaatcattccttgaaagttcttgatgcatgatgttggcaaggggccactaaaattgttgttagaggcatcaaaaattctcaacttaggaa |
37702124 |
T |
 |
| Q |
166 |
atggatgcttggtcatagaacaagtgattgtaccatgcagtttatttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
||| ||||||||| ||||||||||||||| |||||| || | |||||||| |||| | || |||||||| |
|
|
| T |
37702125 |
atgaatgcttggtgctagaacaagtgattgcaccatgaagatgatttgatcgtaaactcagcacctgtaa |
37702194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 37413899 - 37413814
Alignment:
| Q |
150 |
attctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttatttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
||||||||||||||||||| |||||| || ||||||| ||||||| |||||| || |||||||||| |||| | || |||||||| |
|
|
| T |
37413899 |
attctcaacttgggaaatgtatgctttgtgctagaacaggtgattgcaccatgaagattatttgatcgtaaacttagcacctgtaa |
37413814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 16843869 - 16843645
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
||||||||| || ||||||||| || | |||||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
16843869 |
cacagaatcgttgtagtaattgtccgtgcccatgtattgcaaaccaatctggctatcatccacattcatcattccttgaaagttctggatgcatgatgtt |
16843770 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
||||||| |||||||||||||| ||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| ||||| || |||| |
|
|
| T |
16843769 |
ggcaaggtgccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatggatgcttggtgctagaacaagtgattactccatgaagattat |
16843670 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
| |||| ||||| ||| |||||||| |
|
|
| T |
16843669 |
tagatcgtaaaacgagtacctgtaa |
16843645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 16846536 - 16846313
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||| | ||||||||||||||||||||| |||| |||| ||| |
|
|
| T |
16846536 |
cacagaatcattatagtaattgacctttcccatgtactgcaaaccagttttattatcattcgcgttcatcattccttgaaaattcttgatacatgatgtt |
16846437 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
||||| || ||||| || ||||||| ||||||| ||||||||||| || ||||||||||||||||| ||||||| ||||||| ||||| ||||||| |
|
|
| T |
16846436 |
ggcaacggtccactgaatttgttatcgaagatgtccaaaattctcaa-tttggaaatggatgcttggtgctagaacatgtgattgaaccataaagtttat |
16846338 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
|||| |||||| |||| || ||||| |
|
|
| T |
16846337 |
ttgaccttaaactgagtacatgtaa |
16846313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 24218604 - 24218380
Alignment:
| Q |
11 |
cacagaatcattatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtc |
110 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||| || | |||||||||| |||||||||||||||||| ||| ||| | ||| |
|
|
| T |
24218604 |
cacagaatcattataataattggccttacccatgtattgcaaaccagatttattgacattcacattaatcattccttgaaaattcttgaggcaagatgtt |
24218505 |
T |
 |
| Q |
111 |
ggcaagggaccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattgtaccatgcagtttat |
210 |
Q |
| |
|
|||| ||| |||| ||||| ||| ||||| ||| ||||||||| ||| ||||||| || ||||| |||||||||||||| |||||| || | || |
|
|
| T |
24218504 |
ggcacggggccacggaaattattaccagagacatcgtaaattctcatcttcggaaatgattgtttggtgctagaacaagtgattccaccatgaagatgat |
24218405 |
T |
 |
| Q |
211 |
ttgatcttaaaatgagaacctgtaa |
235 |
Q |
| |
|
|||||| |||| |||| |||||||| |
|
|
| T |
24218404 |
ttgatcgtaaactgagtacctgtaa |
24218380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 14552668 - 14552843
Alignment:
| Q |
20 |
attatagtaattggccttacccatgtactgcaaaccaatttggctatcattcacattcatcattccttgaaaattcctgatgcatgttgtcggcaaggga |
119 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||| ||| ||||||| |
|
|
| T |
14552668 |
attatagtagctggctttacccatgtattgcaaaccaatttggctgtcattcacgttcatcattccttgaaagttcttgatgcatgatgttggcaaggtg |
14552767 |
T |
 |
| Q |
120 |
ccactaaaattgttattagagatgtcgaaaattctcaacttgggaaatggatgcttggtcatagaacaagtgattg |
195 |
Q |
| |
|
|||||||||||||| ||||||| || |||||||||||||| ||||||| ||||||| | ||||||| ||||||| |
|
|
| T |
14552768 |
ccactaaaattgttgttagagacatcaaaaattctcaacttaggaaatgaatgcttgatgctagaacaggtgattg |
14552843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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