View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18185_low_13 (Length: 240)

Name: NF18185_low_13
Description: NF18185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18185_low_13
NF18185_low_13
[»] chr3 (3 HSPs)
chr3 (15-225)||(51113105-51113315)
chr3 (72-198)||(51763325-51763451)
chr3 (72-135)||(13469647-13469710)
[»] chr5 (3 HSPs)
chr5 (78-198)||(32268536-32268656)
chr5 (78-135)||(28532814-28532871)
chr5 (79-219)||(41900408-41900548)
[»] chr8 (4 HSPs)
chr8 (72-196)||(17642872-17642996)
chr8 (78-199)||(17635590-17635711)
chr8 (93-198)||(34935922-34936027)
chr8 (78-122)||(32151969-32152013)
[»] chr6 (4 HSPs)
chr6 (81-141)||(19633104-19633164)
chr6 (79-141)||(6423907-6423969)
chr6 (72-169)||(6417087-6417184)
chr6 (79-141)||(6395539-6395601)
[»] chr4 (7 HSPs)
chr4 (78-198)||(1755554-1755674)
chr4 (79-198)||(661860-661979)
chr4 (78-142)||(553760-553824)
chr4 (115-197)||(53760229-53760311)
chr4 (78-221)||(21833186-21833332)
chr4 (62-199)||(7308536-7308673)
chr4 (78-195)||(8186297-8186414)
[»] chr1 (2 HSPs)
chr1 (79-198)||(19467363-19467485)
chr1 (21-199)||(7555142-7555320)
[»] scaffold1155 (1 HSPs)
scaffold1155 (98-200)||(1819-1921)
[»] scaffold0345 (1 HSPs)
scaffold0345 (98-200)||(8295-8397)
[»] scaffold0105 (1 HSPs)
scaffold0105 (98-200)||(30582-30684)
[»] chr7 (3 HSPs)
chr7 (78-179)||(10169004-10169105)
chr7 (78-179)||(10176529-10176630)
chr7 (72-141)||(10615708-10615777)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 51113315 - 51113105
Alignment:
Q  15 tcaaataaagggaagcattcagcgatgaccaacaagtcggtgctgttgatacaacttatgtgcgaacaagtgagagaggtcagagttgtaatattttccg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51113315 tcaaataaagggaagcattcagcgatgaccaacaagtcggtgctgttgatacaacttatgtgcgaacaagtgagagaggtcagagttgtaatattttccg 51113216  T
Q  115 agaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatttcaaatagcaggttgtt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51113215 agaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatttcaaatagcaggttgtt 51113116  T
Q  215 gaggtcaaagg 225  Q
    |||||||||||    
T  51113115 gaggtcaaagg 51113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 51763451 - 51763325
Alignment:
Q  72 atgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaa---taatgcttttgttggagatattgagtg 168  Q
    ||||| |||||||||||||| |||| ||||||||| ||||  || ||| ||||||| |||||||| ||||   ||| ||| ||  |||||| ||| ||||    
T  51763451 atgtgggaacaagtgagagatgtcaaagttgtaatcttttgtgaaaaaactcgcaacccatttgtaggaaaggtaa-gctgtt--tggagagattaagtg 51763355  T
Q  169 aagtaagtttcaatgggaaacgagagattt 198  Q
    | || |||||||||||||||||||||||||    
T  51763354 atgtgagtttcaatgggaaacgagagattt 51763325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 13469710 - 13469647
Alignment:
Q  72 atgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttg 135  Q
    ||||| |||||||||||||||||||| |||||| | ||||  ||||||||||| || |||||||    
T  13469710 atgtgggaacaagtgagagaggtcagcgttgtattcttttgggagaaagctcgtaacccatttg 13469647  T

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Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 32268536 - 32268656
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||||||||||||||||| ||||||||| || | ||| ||||   |||| ||| |||||||||| |||| |||||| |||| ||||||||| || ||||    
T  32268536 gaacaagtgagagaggtcaaagttgtaatcttcttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtgagtt 32268635  T
Q  178 tcaatgggaaacgagagattt 198  Q
    ||||||| |||||||||||||    
T  32268636 tcaatggaaaacgagagattt 32268656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 28532814 - 28532871
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttg 135  Q
    |||||||||| |||||||| ||||||||| ||||  || |||||||||||||||||||    
T  28532814 gaacaagtgaaagaggtcaaagttgtaatgttttgtgaaaaagctcgcaatccatttg 28532871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 41900548 - 41900408
Alignment:
Q  79 aacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagttt 178  Q
    |||||||||||||||||| ||||||||| ||||  || |||||||| || |||  || ||| || | ||||| ||  ||||  |||||||| || |||||    
T  41900548 aacaagtgagagaggtcaaagttgtaatctttttggaaaaagctcgaaacccaaatgcggggatgacgctttggtctgagagtttgagtgatgtgagttt 41900449  T
Q  179 caatgggaaacgagagatttcaaatagcaggttgttgaggt 219  Q
    |||||| ||| ||||||||| | | || || ||||||||||    
T  41900448 caatggaaaatgagagatttgacaaagaagtttgttgaggt 41900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 17642996 - 17642872
Alignment:
Q  72 atgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaag 171  Q
    ||||| ||||||||||||||||||| |||||||||||| |  ||||||||| | || ||||| ||||||||  ||   | |||||||| ||||||||| |    
T  17642996 atgtgggaacaagtgagagaggtcaaagttgtaatattctgggagaaagcttgtaacccattggtgggaatggtgagatggttggagagattgagtgatg 17642897  T
Q  172 taagtttcaatgggaaacgagagat 196  Q
    | ||||||||||| |||| ||||||    
T  17642896 tgagtttcaatggaaaacaagagat 17642872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 17635711 - 17635590
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||||||||||||||||| ||||||||||||    ||||||||||| || ||||| || |||||  ||  || |||||| | |||||||||  | ||||    
T  17635711 gaacaagtgagagaggtcaaagttgtaatattccgggagaaagctcgtaacccattagttggaatggtgagttggttggacagattgagtgatatgagtt 17635612  T
Q  178 tcaatgggaaacgagagatttc 199  Q
    ||||||| ||| ||||||||||    
T  17635611 tcaatggaaaaggagagatttc 17635590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 34936027 - 34935922
Alignment:
Q  93 gtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgag 192  Q
    |||| ||||||||||||||  |||||| ||||||| ||||||   ||||| |||   | |||||||| ||||||||| ||||| ||||||||||||| ||    
T  34936027 gtcaaagttgtaatattttgtgagaaaactcgcaaaccattttgtggaatgatgggatggttggagagattgagtgatgtaaggttcaatgggaaactag 34935928  T
Q  193 agattt 198  Q
    | ||||    
T  34935927 aaattt 34935922  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 32151969 - 32152013
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagct 122  Q
    ||||||||||||||||||| ||||||||| ||||  |||||||||    
T  32151969 gaacaagtgagagaggtcaaagttgtaatgttttgggagaaagct 32152013  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 19633104 - 19633164
Alignment:
Q  81 caagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaa 141  Q
    |||||||||||||||| |||||||||  |||| |||||||||||||| |||||||||||||    
T  19633104 caagtgagagaggtcaaagttgtaatgctttcggagaaagctcgcaacccatttgtgggaa 19633164  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 6423907 - 6423969
Alignment:
Q  79 aacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaa 141  Q
    |||||||||||||||||| |||||| || ||||  |||||||||||||| |||||||||||||    
T  6423907 aacaagtgagagaggtcaaagttgttatgttttgggagaaagctcgcaacccatttgtgggaa 6423969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 6417087 - 6417184
Alignment:
Q  72 atgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtga 169  Q
    ||||| ||||||||||||||||||| ||||||| | ||||  ||||||||||| || ||||||  ||||| | ||  || |||||||||||| |||||    
T  6417087 atgtgggaacaagtgagagaggtcaaagttgtattcttttgggagaaagctcgtaacccatttacgggaaaagtgggttggttggagatattaagtga 6417184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 6395539 - 6395601
Alignment:
Q  79 aacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaa 141  Q
    ||||| |||||||||||| ||||||||||||||  |||| |||| |||| |||| ||||||||    
T  6395539 aacaactgagagaggtcaaagttgtaatattttgggagagagcttgcaacccatctgtgggaa 6395601  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 1755554 - 1755674
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||| ||||||||||||| ||||||||| ||||  ||||||||| |||| || || ||||||||   |  || |||||||| ||| |  || |||||||    
T  1755554 gaacatgtgagagaggtcaaagttgtaatcttttgagagaaagcttgcaaccctttggtgggaatggcgtgttggttggagagattaaacgatgtaagtt 1755653  T
Q  178 tcaatgggaaacgagagattt 198  Q
    |||||||||||||||||||||    
T  1755654 tcaatgggaaacgagagattt 1755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 661860 - 661979
Alignment:
Q  79 aacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagttt 178  Q
    ||||| |||||||||| | ||||||||||| ||  |||||||||||||| ||||| | ||||||  || ||| |||||||| ||||||||| || | |||    
T  661860 aacaaatgagagaggttaaagttgtaatatattgggagaaagctcgcaaaccattagcgggaatggtggtttggttggagagattgagtgacgtgatttt 661959  T
Q  179 caatgggaaacgagagattt 198  Q
    ||| ||  ||||||||||||    
T  661960 caacggagaacgagagattt 661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 553760 - 553824
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaat 142  Q
    ||||| ||||||||||||| ||||||||| ||||  |||||||||||||| ||||||| ||||||    
T  553760 gaacaggtgagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttgcgggaat 553824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 53760311 - 53760229
Alignment:
Q  115 agaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatt 197  Q
    ||||||||||||| |||||||   | ||| ||  || |||||||| ||||||||| || ||||||||||||||||||||||||    
T  53760311 agaaagctcgcaacccatttgcatggatagtggattggttggagagattgagtgatgtgagtttcaatgggaaacgagagatt 53760229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 21833332 - 21833186
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||||||||||||||||| ||| ||||| ||||  |  ||| ||||||| |||| || ||||||  ||  |||||||||||||||||||||  | |  |    
T  21833332 gaacaagtgagagaggtcaaagtagtaatgttttgtgcaaaaactcgcaacccatctgcgggaatggtgggtttgttggagatattgagtgacttgatgt 21833233  T
Q  178 tca---atgggaaacgagagatttcaaatagcaggttgttgaggtca 221  Q
    |||   |||||||||||||||||| |   || |||||||||||||||    
T  21833232 tcaatgatgggaaacgagagatttgacggagaaggttgttgaggtca 21833186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 199
Target Start/End: Original strand, 7308536 - 7308673
Alignment:
Q  62 gatacaacttatgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagata 161  Q
    |||| |||| ||||| |||||||||||| |||||| ||||||||| || |  || ||||||||||  |||| | ||||||| ||   ||||| ||||| |    
T  7308536 gatagaactaatgtgggaacaagtgagacaggtcaaagttgtaatcttctgggacaaagctcgcagcccatctttgggaatgataggtttgtaggagaga 7308635  T
Q  162 ttgagtgaagtaagtttcaatgggaaacgagagatttc 199  Q
    |  ||||   |||| |||| ||||||||||||||||||    
T  7308636 tcaagtgctctaaggttcattgggaaacgagagatttc 7308673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 8186414 - 8186297
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||| ||||| ||||||| |||||||||||||   |||| | |||||||||||||||  |||||  ||  |||||| |||| ||||||||| || || |    
T  8186414 gaacatgtgagtgaggtcaaagttgtaatatttcgggagagaactcgcaatccatttgcaggaatggtgggtttgttagagagattgagtgatgtgaggt 8186315  T
Q  178 tcaatgggaaacgagaga 195  Q
    |||| |  ||||||||||    
T  8186314 tcaacgaaaaacgagaga 8186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 19467485 - 19467363
Alignment:
Q  79 aacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaag--- 175  Q
    |||||||||||||||||| ||||||||||||||  | |||| ||||||| ||||||| ||||||  ||  | ||||||||||| |||| || || ||       
T  19467485 aacaagtgagagaggtcaaagttgtaatattttgagtgaaaactcgcaacccatttgcgggaatggtgtgtctgttggagataatgagagatgtgagttt 19467386  T
Q  176 tttcaatgggaaacgagagattt 198  Q
    ||||||||||||| |||||||||    
T  19467385 tttcaatgggaaatgagagattt 19467363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 7555142 - 7555320
Alignment:
Q  21 aaagggaagcattcagcgatgaccaacaagtcggtgctgttgatacaacttatgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaag 120  Q
    |||||||| |||||||| ||||  ||||||||  |||| |||||| ||   || |  ||||||||||| ||||| | ||||||||||||||  |||||||    
T  7555142 aaagggaaacattcagcaatgagtaacaagtcattgctattgatagaatccattttggaacaagtgagtgaggttaaagttgtaatattttgggagaaag 7555241  T
Q  121 ctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatttc 199  Q
    ||||||||||| |||  || ||  ||  || |||||| ||||  ||||| || || ||||||||||||| |||||||||    
T  7555242 ctcgcaatccaattgcagggatggtgggttggttggaaatatcaagtgatgttaggttcaatgggaaacaagagatttc 7555320  T

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Target: scaffold1155 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 1921 - 1819
Alignment:
Q  98 agttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatt 197  Q
    ||||||||||||||  || ||| ||||||| |||| || |||||| |||  || || ||||| ||||||||| || || |||||||||||||||||||||    
T  1921 agttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgagagatt 1822  T
Q  198 tca 200  Q
    |||    
T  1821 tca 1819  T

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Target: scaffold0345 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 8295 - 8397
Alignment:
Q  98 agttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatt 197  Q
    ||||||||||||||  || ||| ||||||| |||| || |||||| |||  || || ||||| ||||||||| || || |||||||||||||||||||||    
T  8295 agttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgagagatt 8394  T
Q  198 tca 200  Q
    |||    
T  8395 tca 8397  T

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Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 30684 - 30582
Alignment:
Q  98 agttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtttcaatgggaaacgagagatt 197  Q
    ||||||||||||||  || ||| ||||||| |||| || |||||| |||  || || ||||| ||||||||| || || |||||||||||||||||||||    
T  30684 agttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgagagatt 30585  T
Q  198 tca 200  Q
    |||    
T  30584 tca 30582  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 10169105 - 10169004
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||||||||||||||||| |||| |||||||||  |||||| ||||||| ||||||| ||||||  ||| || || ||| |||| |||||| || ||||    
T  10169105 gaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgcgggaatggtgcattggtaggaaatatcgagtgatgtgagtt 10169006  T
Q  178 tc 179  Q
    ||    
T  10169005 tc 10169004  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 10176630 - 10176529
Alignment:
Q  78 gaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaataatgcttttgttggagatattgagtgaagtaagtt 177  Q
    ||||||||||||||||||| |||| |||||||||  |||||| ||||||| ||||||| ||||||  ||| || || ||| |||| |||||| || ||||    
T  10176630 gaacaagtgagagaggtcaaagttctaatattttgagagaaaactcgcaacccatttgcgggaatggtgcattggtaggaaatatcgagtgatgtgagtt 10176531  T
Q  178 tc 179  Q
    ||    
T  10176530 tc 10176529  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 10615708 - 10615777
Alignment:
Q  72 atgtgcgaacaagtgagagaggtcagagttgtaatattttccgagaaagctcgcaatccatttgtgggaa 141  Q
    ||||| ||||||||||||||||||| ||||||||| ||||  ||||||||||| || ||||||| |||||    
T  10615708 atgtgggaacaagtgagagaggtcaaagttgtaatcttttgggagaaagctcgtaacccatttgcgggaa 10615777  T

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