View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18187_low_11 (Length: 339)

Name: NF18187_low_11
Description: NF18187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18187_low_11
NF18187_low_11
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-333)||(4327-4659)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-333)||(23962-24280)
[»] chr2 (31 HSPs)
chr2 (1-333)||(19670676-19671007)
chr2 (1-253)||(25303941-25304197)
chr2 (1-272)||(4822-5096)
chr2 (1-249)||(24296118-24296370)
chr2 (1-195)||(23823054-23823251)
chr2 (1-195)||(23824998-23825195)
chr2 (1-192)||(23832133-23832327)
chr2 (1-108)||(6877963-6878071)
chr2 (1-108)||(22862008-22862116)
chr2 (1-95)||(19658483-19658578)
chr2 (1-95)||(43641360-43641455)
chr2 (1-81)||(27260130-27260211)
chr2 (1-108)||(25600481-25600589)
chr2 (1-95)||(15631930-15632025)
chr2 (1-83)||(19435004-19435087)
chr2 (1-95)||(24088907-24089002)
chr2 (264-333)||(24296350-24296419)
chr2 (1-108)||(8886661-8886769)
chr2 (262-333)||(5052-5123)
chr2 (1-95)||(24272592-24272687)
chr2 (1-95)||(18534363-18534458)
chr2 (292-333)||(23823310-23823351)
chr2 (292-333)||(23825254-23825295)
chr2 (1-108)||(22282646-22282756)
chr2 (5-95)||(22137365-22137456)
chr2 (262-328)||(25303900-25303967)
chr2 (86-235)||(16294376-16294529)
chr2 (1-70)||(43644497-43644567)
chr2 (296-333)||(22137635-22137672)
chr2 (296-333)||(22654339-22654375)
chr2 (297-333)||(25600173-25600208)
[»] chr6 (28 HSPs)
chr6 (1-333)||(17790679-17791008)
chr6 (1-305)||(16889283-16889591)
chr6 (1-272)||(18383220-18383495)
chr6 (1-175)||(33323270-33323445)
chr6 (1-108)||(16105083-16105191)
chr6 (1-108)||(22428700-22428808)
chr6 (1-108)||(18775736-18775844)
chr6 (1-108)||(25745834-25745942)
chr6 (1-79)||(16083970-16084049)
chr6 (1-95)||(31626976-31627071)
chr6 (228-333)||(7829660-7829764)
chr6 (228-333)||(16889549-16889657)
chr6 (1-95)||(34965483-34965578)
chr6 (86-196)||(6092949-6093060)
chr6 (1-79)||(35137486-35137565)
chr6 (1-73)||(1554410-1554482)
chr6 (1-73)||(19984725-19984799)
chr6 (1-48)||(23151846-23151893)
chr6 (15-95)||(19852808-19852889)
chr6 (86-253)||(31469171-31469343)
chr6 (1-108)||(18128805-18128918)
chr6 (86-253)||(19670850-19671021)
chr6 (1-95)||(16134817-16134912)
chr6 (262-328)||(18383451-18383518)
chr6 (1-83)||(22846675-22846762)
chr6 (1-73)||(16238934-16239006)
chr6 (296-333)||(25369258-25369295)
chr6 (1-73)||(11214709-11214781)
[»] chr5 (17 HSPs)
chr5 (1-253)||(23492382-23492635)
chr5 (1-333)||(28888216-28888551)
chr5 (1-272)||(37189664-37189938)
chr5 (1-195)||(7727014-7727210)
chr5 (1-272)||(13793487-13793762)
chr5 (1-249)||(32967708-32967960)
chr5 (1-108)||(27185364-27185472)
chr5 (1-95)||(24227003-24227098)
chr5 (1-94)||(4863803-4863897)
chr5 (1-95)||(21615549-21615644)
chr5 (1-95)||(19860770-19860865)
chr5 (15-108)||(21661268-21661362)
chr5 (228-333)||(23492236-23492339)
chr5 (262-328)||(37189894-37189960)
chr5 (1-95)||(11964485-11964580)
chr5 (262-328)||(13793464-13793531)
chr5 (262-333)||(32967938-32968008)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-270)||(78046-78310)
scaffold0028 (263-333)||(78017-78087)
[»] chr4 (21 HSPs)
chr4 (1-333)||(34197705-34198025)
chr4 (1-172)||(12245792-12245966)
chr4 (1-195)||(27959465-27959661)
chr4 (1-195)||(37958597-37958794)
chr4 (1-195)||(15852856-15853053)
chr4 (1-272)||(41167474-41167743)
chr4 (1-108)||(21961099-21961207)
chr4 (1-108)||(12901303-12901411)
chr4 (101-253)||(5407516-5407671)
chr4 (1-108)||(8874024-8874132)
chr4 (86-195)||(7966232-7966343)
chr4 (1-108)||(110010-110117)
chr4 (1-83)||(14900026-14900109)
chr4 (266-333)||(41167703-41167770)
chr4 (262-333)||(37958827-37958898)
chr4 (149-253)||(13595727-13595832)
chr4 (296-333)||(43283256-43283293)
chr4 (86-253)||(13448672-13448843)
chr4 (1-48)||(47469873-47469920)
chr4 (2-95)||(41257889-41257983)
chr4 (296-333)||(14867696-14867733)
[»] chr3 (41 HSPs)
chr3 (1-333)||(48419965-48420300)
chr3 (1-249)||(12490269-12490521)
chr3 (1-243)||(11330540-11330785)
chr3 (1-172)||(15874619-15874793)
chr3 (1-195)||(18008669-18008866)
chr3 (1-108)||(12351376-12351484)
chr3 (1-108)||(50113658-50113766)
chr3 (1-83)||(7852353-7852436)
chr3 (1-175)||(55442298-55442477)
chr3 (1-108)||(319144-319252)
chr3 (1-108)||(8630367-8630475)
chr3 (1-95)||(47983431-47983527)
chr3 (1-95)||(47992718-47992814)
chr3 (1-95)||(48002005-48002101)
chr3 (1-95)||(48011291-48011387)
chr3 (1-95)||(5229613-5229708)
chr3 (1-95)||(47786401-47786496)
chr3 (1-83)||(38812528-38812610)
chr3 (126-253)||(33371042-33371170)
chr3 (262-333)||(11330769-11330840)
chr3 (228-333)||(12490568-12490672)
chr3 (1-73)||(2048623-2048697)
chr3 (262-333)||(15874506-15874577)
chr3 (296-333)||(15548828-15548865)
chr3 (1-108)||(23491033-23491143)
chr3 (1-95)||(9592286-9592381)
chr3 (1-83)||(14060773-14060856)
chr3 (2-108)||(10737086-10737192)
chr3 (1-73)||(5227281-5227353)
chr3 (1-71)||(19230616-19230688)
chr3 (15-95)||(33370914-33370994)
chr3 (1-108)||(14846182-14846289)
chr3 (262-333)||(18008899-18008970)
chr3 (295-333)||(15515925-15515963)
chr3 (300-333)||(11381082-11381115)
chr3 (296-333)||(14061073-14061110)
chr3 (296-333)||(17137699-17137736)
chr3 (296-333)||(39654163-39654200)
chr3 (144-172)||(325178-325206)
chr3 (125-235)||(11636893-11637005)
chr3 (1-108)||(33340370-33340480)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-253)||(106456-106710)
scaffold0022 (262-333)||(106684-106755)
scaffold0022 (1-95)||(130422-130517)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-272)||(118141-118413)
scaffold0016 (262-333)||(118369-118440)
[»] chr8 (30 HSPs)
chr8 (1-272)||(21192281-21192555)
chr8 (1-253)||(21199708-21199964)
chr8 (1-192)||(39448357-39448549)
chr8 (1-280)||(23835565-23835848)
chr8 (1-168)||(21696020-21696189)
chr8 (1-95)||(41244170-41244265)
chr8 (1-83)||(37655181-37655264)
chr8 (1-82)||(41245210-41245292)
chr8 (1-95)||(31195819-31195914)
chr8 (5-108)||(37605513-37605618)
chr8 (262-333)||(21199938-21200009)
chr8 (262-333)||(21192511-21192582)
chr8 (1-73)||(16203858-16203932)
chr8 (1-95)||(22498838-22498933)
chr8 (1-95)||(33612596-33612691)
chr8 (86-235)||(21233664-21233817)
chr8 (1-126)||(23116355-23116481)
chr8 (4-95)||(33170798-33170890)
chr8 (1-51)||(23153344-23153394)
chr8 (149-253)||(20708159-20708264)
chr8 (5-42)||(37609955-37609992)
chr8 (1-48)||(22312251-22312298)
chr8 (262-328)||(23835551-23835618)
chr8 (1-73)||(29758856-29758930)
chr8 (295-333)||(18768653-18768691)
chr8 (296-333)||(21695899-21695935)
chr8 (54-95)||(25294535-25294576)
chr8 (54-95)||(25756524-25756565)
chr8 (296-333)||(39448610-39448646)
chr8 (297-333)||(22737798-22737834)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-175)||(78369-78545)
[»] scaffold0507 (2 HSPs)
scaffold0507 (1-198)||(4889-5086)
scaffold0507 (228-333)||(5151-5255)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-192)||(7200-7392)
scaffold0095 (296-333)||(7453-7489)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-272)||(33826-34101)
scaffold0013 (262-328)||(33803-33870)
[»] chr7 (27 HSPs)
chr7 (1-249)||(15913968-15914223)
chr7 (1-272)||(13376029-13376302)
chr7 (1-185)||(13388410-13388596)
chr7 (1-95)||(9058168-9058263)
chr7 (1-108)||(3893618-3893726)
chr7 (1-108)||(12753404-12753512)
chr7 (1-108)||(45453791-45453896)
chr7 (1-106)||(112830-112939)
chr7 (1-95)||(26071799-26071894)
chr7 (1-95)||(26095586-26095681)
chr7 (262-333)||(13376002-13376073)
chr7 (1-73)||(15761893-15761965)
chr7 (1-95)||(8565114-8565209)
chr7 (262-333)||(15914201-15914272)
chr7 (1-106)||(3058582-3058687)
chr7 (1-73)||(125392-125466)
chr7 (1-108)||(1938303-1938410)
chr7 (149-253)||(9641413-9641518)
chr7 (1-73)||(2027122-2027196)
chr7 (1-95)||(9322600-9322695)
chr7 (262-328)||(13388313-13388380)
chr7 (296-333)||(11285348-11285385)
chr7 (296-333)||(13868044-13868080)
chr7 (296-333)||(15629004-15629040)
chr7 (296-333)||(49049687-49049723)
chr7 (1-41)||(4483318-4483358)
chr7 (1-108)||(32496079-32496189)
[»] chr1 (28 HSPs)
chr1 (1-249)||(38035157-38035409)
chr1 (1-249)||(36357873-36358125)
chr1 (1-148)||(13378297-13378446)
chr1 (1-249)||(19601560-19601811)
chr1 (1-98)||(41217982-41218080)
chr1 (9-108)||(35053361-35053461)
chr1 (1-108)||(5676137-5676245)
chr1 (1-108)||(21193689-21193797)
chr1 (1-108)||(37235497-37235605)
chr1 (1-83)||(8539495-8539578)
chr1 (1-83)||(8604734-8604817)
chr1 (264-333)||(36358105-36358174)
chr1 (264-333)||(38035389-38035458)
chr1 (114-253)||(18164543-18164685)
chr1 (262-333)||(19601511-19601582)
chr1 (1-73)||(20444301-20444374)
chr1 (1-73)||(37846002-37846075)
chr1 (1-95)||(5769750-5769845)
chr1 (1-95)||(22144928-22145023)
chr1 (1-108)||(22226509-22226616)
chr1 (295-333)||(20956848-20956886)
chr1 (295-333)||(22837222-22837260)
chr1 (295-333)||(22837425-22837463)
chr1 (1-64)||(20530075-20530139)
chr1 (1-83)||(20821501-20821584)
chr1 (295-333)||(27673107-27673145)
chr1 (296-333)||(51658219-51658255)
chr1 (1-108)||(20929999-20930109)
[»] scaffold0195 (4 HSPs)
scaffold0195 (1-174)||(8186-8360)
scaffold0195 (1-174)||(13575-13749)
scaffold0195 (1-108)||(17827-17937)
scaffold0195 (1-108)||(19911-20021)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-175)||(71815-71991)
[»] scaffold0610 (2 HSPs)
scaffold0610 (1-174)||(2158-2332)
scaffold0610 (296-333)||(2475-2511)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-108)||(60096-60204)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-108)||(4651-4759)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-108)||(3181-3289)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-108)||(13726-13834)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-108)||(12720-12828)
[»] scaffold0700 (1 HSPs)
scaffold0700 (86-249)||(960-1126)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-107)||(7955-8062)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-95)||(37997-38092)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-107)||(14201-14308)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-95)||(3831-3926)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-95)||(6081-6176)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-107)||(27097-27204)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-95)||(138342-138437)
[»] scaffold0447 (1 HSPs)
scaffold0447 (1-95)||(3160-3255)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-95)||(5768-5863)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-95)||(68862-68957)
[»] scaffold1068 (1 HSPs)
scaffold1068 (86-175)||(1695-1786)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-95)||(8613-8708)
[»] scaffold0193 (1 HSPs)
scaffold0193 (2-95)||(3292-3386)
[»] scaffold0020 (1 HSPs)
scaffold0020 (86-195)||(104376-104487)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-95)||(25148-25243)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-108)||(56461-56569)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-108)||(236703-236811)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-108)||(11556-11663)
[»] scaffold0148 (1 HSPs)
scaffold0148 (149-253)||(36267-36372)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-73)||(70929-71002)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-108)||(249071-249182)
[»] scaffold0786 (4 HSPs)
scaffold0786 (1-95)||(224-319)
scaffold0786 (1-95)||(5279-5374)
scaffold0786 (296-333)||(8-45)
scaffold0786 (296-333)||(5063-5100)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-95)||(84955-85050)
scaffold0004 (1-108)||(197626-197733)
scaffold0004 (1-126)||(26062-26188)
[»] scaffold1753 (1 HSPs)
scaffold1753 (1-70)||(29-100)
[»] scaffold0390 (2 HSPs)
scaffold0390 (5-95)||(3812-3903)
scaffold0390 (296-333)||(3596-3633)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-73)||(145095-145169)
scaffold0025 (1-73)||(147354-147428)
[»] scaffold0253 (1 HSPs)
scaffold0253 (295-333)||(4067-4105)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-108)||(2653-2763)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-108)||(4272-4382)
[»] scaffold0269 (2 HSPs)
scaffold0269 (1-108)||(607-717)
scaffold0269 (296-333)||(3055-3091)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-108)||(32714-32824)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-108)||(49112-49222)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-108)||(40020-40130)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-95)||(55925-56020)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-108)||(54169-54276)
scaffold0032 (1-48)||(109604-109651)
[»] scaffold0165 (1 HSPs)
scaffold0165 (86-235)||(20506-20659)
[»] scaffold0561 (1 HSPs)
scaffold0561 (149-253)||(4464-4569)
[»] scaffold0121 (1 HSPs)
scaffold0121 (296-333)||(7299-7335)
[»] scaffold0049 (1 HSPs)
scaffold0049 (296-333)||(30650-30686)
[»] scaffold1404 (1 HSPs)
scaffold1404 (5-73)||(121-189)
[»] scaffold0225 (1 HSPs)
scaffold0225 (5-73)||(28385-28453)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-108)||(217272-217381)


Alignment Details
Target: scaffold0327 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 4659 - 4327
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  4659 ttacttcagagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacttgtattt 4560  T
Q  101 atgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 200  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4559 atgtgccatgcttagggacatatcattgttgcacgattcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 4460  T
Q  201 tcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttatt 300  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4459 tcgttatgtaatattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaattgttttatt 4360  T
Q  301 catgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||||||||||||||||||||||||||    
T  4359 catgtataactgttatgtggattatgatgatgt 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 23962 - 24280
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||| |||     
T  23962 ttacttcgaagattatgtaagacgggtgtgaaatcttacatacgatgtgttgatgcatcgaaggta------tggaggtgattcggtaccacatgcattt 24055  T
Q  101 atgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 200  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24056 atgtgtcatgctt-------tatcattgttgcacgagtcctatatgtgaaataattgaaatacttgtggttgtgaatatttggatgtgatatttgattca 24148  T
Q  201 tcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttatt 300  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24149 tcgttatgtattattgttgagattaaatattcatg-caattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaattgttttatt 24247  T
Q  301 catgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||||||||||||||||||||||||||    
T  24248 catgtataactgttatgtggattatgatgatgt 24280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 19670676 - 19671007
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| | |||||||| |||     
T  19670676 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtcttgatgcatcgaaggtgacgaccttgaggagattcggcaccacatgcattt 19670775  T
Q  101 atgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 200  Q
    |||||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19670776 atgtgtcatgattagggacatatcaatgttgaatgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttagatgtgatattggattca 19670875  T
Q  201 tcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttatt 300  Q
    || |||||||  ||| |||||||||||| |||||| | |||||||||||||||  || | |||||||| ||||| |||||||||||||||  ||||||||    
T  19670876 tcattatgtattattattgagattaaattttcatgtcgattatgtggaacttgaatt-gatttattcacgtcaattatttggaaatggaatcgttttatt 19670974  T
Q  301 catgtataactgttatgtggattatgatgatgt 333  Q
    ||||| |||||||||||||||||||||||||||    
T  19670975 catgtttaactgttatgtggattatgatgatgt 19671007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 25304197 - 25303941
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  25304197 ttacttcggagattatgtaagaagggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 25304098  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| | ||||||||||||  |||||||| |||||||| ||||| || ||||||||||||||||||||||| |  |||| |||||||||| ||    
T  25304097 tatgtgtcatgttaagggacatatcattttgttgcatgagtcctaaatgtggaacaattgacatacttgtggttgtgagtgcttggttgtgatatttgga 25303998  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    || ||| ||||| |  ||| || ||||| | |||||| | ||||||| |||||||||    
T  25303997 tttatcattatgaattattttttagattcattattcaagtcaattatttggaacttg 25303941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 4822 - 5096
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  4822 ttacttcggagattatgtaagacgggggtgaaatcttacatacaatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 4921  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| ||||| ||||| ||  |||||||| |||||||| ||||  ||| ||||||||||||||||||| || |  |||| |||||||||| ||    
T  4922 tatgtgtcatggttaggaacataacattttgttgcatgagtcctaaatgtagaatgattgacatacttgtggttgcgagtgattggttgtgatatttgga 5021  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    |  ||| |||||||  |||||||||||||  ||| |||| ||||||| |||||||||  || ||||||||||||||    
T  5022 tgtatcattatgtattattgttgagattagttatccatgtcaattatttggaacttgaatt-gttttattcatgtc 5096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 24296118 - 24296370
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  24296118 ttacttcggagattatgtaagacttgggtgaaatcttacatacgatgttttagttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 24296217  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
     |||||||||| ||||||||||| ||  |||||||| |||||||| ||||| ||| |||||||||||||||||||||| |  ||||  |||||| ||| |    
T  24296218 tatgtgtcatgtttagggacataacattttgttgcatgagtcctaaatgtggaatgattgacatacttgtggttgtgattgattggtcgtgatacttgaa 24296317  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    ||  || |||||||  || |||||||||||  ||||||| ||||||| |||||    
T  24296318 tttgtcattatgtattatcgttgagattaatcattcatgtcaattatttggaa 24296370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 23823054 - 23823251
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtat 98  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| ||    
T  23823054 ttacttcggagattatgtaagactgag-gtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcat 23823152  T
Q  99 tcatgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
    | ||||||||||  |||||||||| ||  ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |  |||| |||||||||||    
T  23823153 ttatgtgtcatgtctagggacataacattttgttgcacgagtcctaaatgtggaatgattgacatacttgtggttgtgagtgattggttgtgatatttg 23823251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 23824998 - 23825195
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtat 98  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| ||    
T  23824998 ttacttcggagattatgtaagactgag-gtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcat 23825096  T
Q  99 tcatgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
    | ||||||||||  |||||||||| ||  ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |  |||| |||||||||||    
T  23825097 ttatgtgtcatgtctagggacataacattttgttgcacgagtcctaaatgtggaatgattgacatacttgtggttgtgagtgattggttgtgatatttg 23825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 23832133 - 23832327
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtat 98  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| ||    
T  23832133 ttacttcggagattatgtaagactgag-gtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcat 23832231  T
Q  99 tcatgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatat 192  Q
    | ||||||||||  |||||||||| ||  ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |  |||| ||||||||    
T  23832232 ttatgtgtcatgtctagggacataacattttgttgcacgagtcctaaatgtggaatgattgacatacttgtggttgtgagtgattggttgtgatat 23832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6878071 - 6877963
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||| | |||||||| | |||||| ||| |||    
T  6878071 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgactttgaggtgatccggtaccaaatgcatt 6877972  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  6877971 tatgtgtca 6877963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22862116 - 22862008
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||||| ||||||||   |||||||||| |||    
T  22862116 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatctcgtaccacatgcatt 22862017  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  22862016 tatgtgtca 22862008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19658578 - 19658483
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  19658578 ttacttcgaagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 19658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43641455 - 43641360
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttga-tgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||    
T  43641455 ttacttcggtgattatgtaagacggatgtgaaatcttacatacgatgtttttattgcatcgaaggtgacgaccttgaggtgattcggtaccacatg 43641360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27260211 - 27260130
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtga 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||| |||||||    
T  27260211 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtttttgttgcatcaaaggtgacgaccttgaggtga 27260130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25600589 - 25600481
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| ||   |||||||||| ||     
T  25600589 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtaatatggtaccacatgcata 25600490  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  25600489 tatgtgtca 25600481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15632025 - 15631930
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| |   || ||||| |||||||||||||||||||||||| ||||||||||    
T  15632025 ttacttcggagattatgtaagacgggtgtgaaatcttacatatgatgttcaagaggcatcaaaggtgacgacctggaggtgattcggtaccacatg 15631930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19435004 - 19435087
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| | ||| |||||||||||||||||||| |||||||||    
T  19435004 ttacttcggagattatgtaagacgggtgtgaaatcttacgtacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatt 19435087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24088907 - 24089002
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||  ||||||||||    
T  24088907 ttacgtcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaagatgacgaccttgaggtgatttggtaccacatg 24089002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 24296350 - 24296419
Alignment:
Q  264 attcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||    
T  24296350 attcatgtcaattatttggaatttgaaatgttttattcatgtctaactgttatgtggattatgatgatgt 24296419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8886769 - 8886661
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||||||||||||   || ||||  |||||||||| |||    
T  8886769 ttacttcagagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttttggagatttggtaccacatgcatt 8886670  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  8886669 tatgtgtca 8886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 5052 - 5123
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||| |||||||| ||||||||| | ||| |||||||||||||| |||||| ||||||||||||||||||||    
T  5052 ttatccatgtcaattatttggaacttgaattgttttattcatgtctaactgctatgtggattatgatgatgt 5123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24272687 - 24272592
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||| | ||| ||||||   ||||||||||| || ||||||  ||||||||||    
T  24272687 ttacttcggtgataatgtaagacgagtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaagtgatttggtaccacatg 24272592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18534458 - 18534363
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||||||||| ||||||||||| |||| | ||| ||||||   ||||||||| | |||||||||  ||||||||||    
T  18534458 ttacttcggtgataatgtaagacgagtgtgcaatcttacatatgatgtttttgttgcatcatgggtgacgacgttgaggtgatttggtaccacatg 18534363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 23823310 - 23823351
Alignment:
Q  292 tgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  23823310 tgttctattcatgtctaactgttatgtggattatgatgatgt 23823351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 23825254 - 23825295
Alignment:
Q  292 tgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  23825254 tgttctattcatgtctaactgttatgtggattatgatgatgt 23825295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22282756 - 22282646
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  22282756 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 22282657  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  22282656 tttatgtgtca 22282646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 22137365 - 22137456
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||| ||| |||||||| | ||||||||||||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  22137365 ttcggtgataatgtaagatgggtgtgaaatcttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 22137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 25303967 - 25303900
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactg-ttatgtggattatgat 328  Q
    ||||||| ||||| ||||||||| | ||| || ||||||||||| |||||| ||||||||||||||||    
T  25303967 ttattcaagtcaattatttggaacttgaagtgatttattcatgtctaactgtttatgtggattatgat 25303900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 16294376 - 16294529
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||||||| ||  ||||| ||||||||  ||| ||| ||||||||  ||||||| ||||||| |||||||||||||||| |  |||    
T  16294376 gtaccgcatgcatttatgtgtcgtgtctaggggcatatcatattgtggcatgagtcctaattgtgaaaataattgatatacttgtggttgtgagtgattg 16294475  T
Q  183 gatgtgata-tttgattcatcgttatgtaacattgttgagattaaatattcatg 235  Q
      ||||||| || |||| ||| ||||| |  ||| |||||||||||||||||||    
T  16294476 attgtgatacttggatttatcattatgaattattattgagattaaatattcatg 16294529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43644497 - 43644567
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg-ttgatgcatcgaaggtgacga 70  Q
    |||||||| ||||||||| || || |||||||  ||||||||||||||| ||||| || ||||||||||||    
T  43644497 ttacttcgaagattatgtgaggcgggtgtgaacccttacatacgatgtgcttgattcaacgaaggtgacga 43644567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 22137635 - 22137672
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| || ||||||||||||||||||||||||    
T  22137635 ttattcatgtttatctgttatgtggattatgatgatgt 22137672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 22654375 - 22654339
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22654375 ttattcatgt-taactgttatgtggattatgatgatgt 22654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 25600208 - 25600173
Alignment:
Q  297 tattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| |||||||||||||||||||||||||||    
T  25600208 tattcatgt-taactgttatgtggattatgatgatgt 25600173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 17790679 - 17791008
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||      
T  17790679 ttacttcggagattatgtaagacgggtgtgaaatcttatatacgatgtgttgatgcatcgaaggtgacgacctagaggtgattcggtaccacatgcatc- 17790777  T
Q  101 atgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 200  Q
     ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  17790778 -tgtgttatgattagggacatatcattgttgcatgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttgggtgtgatatttgattta 17790876  T
Q  201 tcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttatt 300  Q
    || |||| ||   | |||||||||||||||||||| |||||| || |||||||  || |  ||||||||||||  ||||| | ||||||| |||||||||    
T  17790877 tcattatttatattggttgagattaaatattcatgtcaattacgtagaacttgaatt-gaattattcatgtcatttattttggaatggaattgttttatt 17790975  T
Q  301 catgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||||||||| ||||||||||||||||    
T  17790976 catgtataactgttatatggattatgatgatgt 17791008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 16889283 - 16889591
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |     
T  16889283 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcggtaccacatgcactt 16889382  T
Q  101 atgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattca 200  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  16889383 atgtgtcatgattagggacatatcattgttgcatgagtcttatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgataattgattta 16889482  T
Q  201 tc-----gttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgtt 295  Q
    ||      |||||||  |||||| |||||||||||||||| |||||||||||||||||  ||   |||||||||||||| ||| ||||| | ||| || |    
T  16889483 tcattatattatgtattattgttaagattaaatattcatgtcaattatgtggaacttgaatt-tatttattcatgtcaattatgtggaacttgaattgat 16889581  T
Q  296 ttattcatgt 305  Q
    ||||||||||    
T  16889582 ttattcatgt 16889591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 18383220 - 18383495
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| | |||||||||||||| |||||||||||||||||| |||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  18383220 ttacttcagtgattatgtaagacgggtgtgaaatcttacatacaatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 18383319  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
     |||||||||| ||||||||||||||  |||| ||| |||||||| ||||| |||||||| |||||||||||||| || |  |||| ||||||||||| |    
T  18383320 tatgtgtcatgtttagggacatatcattttgtcgcatgagtcctaaatgtggaataattggcatacttgtggttgcgagtgattggttgtgatatttgaa 18383419  T
Q  197 ttcatcgttatgtaacatt-gttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    || ||| ||||| | ||||  |||||||||| |||||||| ||||||| ||||| |||  |||| ||||||||||||    
T  18383420 tttatctttatgaatcattatttgagattaattattcatgtcaattatttggaatttgaattgg-tttattcatgtc 18383495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33323445 - 33323270
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||| ||| |||    
T  33323445 ttactacggaaattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccaaatgcatt 33323346  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtga 175  Q
     |||||||||| |||||||||||||||||||||| ||||||    |||| ||| ||||||||| ||||||||||||    
T  33323345 tatgtgtcatgattagggacatatcattgttgcatgagtcccgattgtggaatgattgacatatttgtggttgtga 33323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16105191 - 16105083
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| || | |||||||||| |||    
T  16105191 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggttatccggtaccacatgcatt 16105092  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  16105091 tatgtgtca 16105083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22428808 - 22428700
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  22428808 ttacttcggagattatgtaagacgggtgtgaaatcgtacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 22428709  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  22428708 tatgtgtca 22428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18775844 - 18775736
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt-gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||||||||||| | |||||||| | |||||||||| |||    
T  18775844 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtctttgttgtatcgaaggtgacgactttgaggtgatccggtaccacatgcatt 18775745  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  18775744 tatgtgtca 18775736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25745834 - 25745942
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||| | ||| |||||||| ||||||||||| |||||||||  |||||||||| |||    
T  25745834 ttacttcggagattatgtaagacaggtgtgaactcttacatacgatgtttttgttgcatcgagggtgacgaccttgaggtgatttggtaccacatgaatt 25745933  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  25745934 tatgtgtca 25745942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16084049 - 16083970
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggt 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||    
T  16084049 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggt 16083970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31627071 - 31626976
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  31627071 ttacttcggagattatgtaagacatgtgtgaaatcttacatatgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 31626976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 7829660 - 7829764
Alignment:
Q  228 tattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatga 327  Q
    |||||||| |||||||||||||||    ||| ||||||||||||||| ||| ||||| | ||| || ||||||||||| |||||||||||||||||||||    
T  7829660 tattcatgtcaattatgtggaactgaaattg-ttttattcatgtcaattatgtggaacttgaattgatttattcatgtctaactgttatgtggattatga 7829758  T
Q  328 tgatgt 333  Q
    ||||||    
T  7829759 tgatgt 7829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 16889549 - 16889657
Alignment:
Q  228 tattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttat----tcatgtataactgttatgtggatt 323  Q
    |||||||| |||||||||||||||||  ||| ||| ||||||||| | |||||| |||||||| ||| ||||    ||||||||||||||||||||||||    
T  16889549 tattcatgtcaattatgtggaacttgaattgattt-attcatgtcgattatttgtaaatggaattgtattatatattcatgtataactgttatgtggatt 16889647  T
Q  324 atgatgatgt 333  Q
    ||||||||||    
T  16889648 atgatgatgt 16889657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34965578 - 34965483
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||||| | || | |||||||||||||||||||| |||||||||  ||||||||||    
T  34965578 ttacttcggtgataatgtaagacggatgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 34965483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 6093060 - 6092949
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcatt-gttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttgga 184  Q
    ||||| |||| ||| |||||||||| || ||||| ||||||| |||||| |||||||| |||||||||||||||||||| ||||| ||||| |  ||||     
T  6093060 gtaccgcatgcatttatgtgtcatgatttgggacgtatcatttgttgcatgagtcctaaatgtgaaataattgacatacatgtggatgtgagtgattggt 6092961  T
Q  185 tgtgatatttga 196  Q
    |||||| |||||    
T  6092960 tgtgatgtttga 6092949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35137486 - 35137565
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggt 79  Q
    ||||| || ||||||||||||| | |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||    
T  35137486 ttactacgaagattatgtaagatgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggt 35137565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1554482 - 1554410
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||||||||||||    
T  1554482 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtgacgacct 1554410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19984725 - 19984799
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg--ttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||  ||| | ||||||||||||||||||    
T  19984725 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgatttgttccatcgaaggtgacgacct 19984799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23151893 - 23151846
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt 48  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23151893 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgt 23151846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 19852889 - 19852808
Alignment:
Q  15 atgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  19852889 atgtaagacgagtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 19852808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 31469171 - 31469343
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtg-aaataattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||||||| ||  ||||||||||||||  ||| ||| ||||||||  |||| |||||||||| |||||||||||||||| |  |||    
T  31469171 gtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcctaattgtggaaataattgatatacttgtggttgtgagtgattg 31469270  T
Q  183 gatgtgatattt-gattcatcgttatgtaacattgttgagatt-aaatattcatgccaattatgtggaacttg 253  Q
    | |||||||||| |||  ||| ||||| |  ||| |||||||| |||||||||||  |||||| |||||||||    
T  31469271 gttgtgatatttggatctatcattatgaattattattgagattaaaatattcatgttaattatttggaacttg 31469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18128918 - 18128805
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt----gttg-at-gcatcgaaggtgacgacctggaggtgattcagtaccacat 94  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||    || | || | |||||||||||||| ||||||||||||  |||||||||    
T  18128918 ttacttcgaagattatgtaagacaggtgtgaaatcttacatacgatgttcaagtggcatcgaatcgaaggtgacgaactggaggtgatttggtaccacat 18128819  T
Q  95 gtattcatgtgtca 108  Q
    | ||| || |||||    
T  18128818 gcatttatatgtca 18128805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 19671021 - 19670850
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||||||| ||  ||||||||||||||  ||| ||| ||||||||  ||||||| ||||||| |||||||||| ||||| |  |||    
T  19671021 gtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcctaattgtgaaaataattgatatacttgtggatgtgagtgattg 19670922  T
Q  183 gatgtgatattt-gattcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    | |||||||||| |||| ||| ||||| |  ||| |||||||||||||| ||||  |||||| | |||||||    
T  19670921 gttgtgatatttggatttatcattatgaattattattgagattaaatatccatgttaattatttagaacttg 19670850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16134912 - 16134817
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||| ||||| |||||||||  ||||||||||    
T  16134912 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgaagaccttgaggtgatttggtaccacatg 16134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 18383451 - 18383518
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactg-ttatgtggattatgat 328  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||| |||||| ||||||||||||||||    
T  18383451 ttattcatgtcaattatttggaatttgaattggtttattcatgtctaactgtttatgtggattatgat 18383518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22846762 - 22846675
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-----gtgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||      | ||| |||||||||||||||||||| | |||||||    
T  22846762 ttacttcggtgattatgtaagacggatgtgaaatcttacatacgatcgatgtttttgttgcatcgaaggtgacgaccttgcggtgatt 22846675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16239006 - 16238934
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || | |||||  |||||||||||||||||    ||||| ||||||||||||    
T  16239006 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgtgttttatcatcggaggtgacgacct 16238934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 25369258 - 25369295
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  25369258 ttattcatgtttaactgttatgtcgattatgatgatgt 25369295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11214781 - 11214709
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||  || | |||||  |||||||||||||||||    ||||| ||||||||||||    
T  11214781 ttacttcggagattatgtaaagcgggggtgaacccttacatacgatgtgttttatcatcggaggtgacgacct 11214709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 23492635 - 23492382
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  23492635 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 23492536  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattc 199  Q
     |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  23492535 tatgtgtcatgattagggacatatcattgttgcatgagtcctatatgtaaaataattgacatacttgtggttgtgaatatttggttgtgatatttgattt 23492436  T
Q  200 atcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    ||| |||||||  || |||| ||||||| ||||||| |||||||||||||||||    
T  23492435 atcattatgtattatcgttgggattaaacattcatgtcaattatgtggaacttg 23492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 28888551 - 28888216
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacga---cctggaggtgattcagtaccacatgt 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||| ||| ||   ||| |||||||||| ||||||||||     
T  28888551 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaagatgatgatgaccttgaggtgattcggtaccacatgc 28888452  T
Q  97 attcatgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttga 196  Q
    ||| ||| |||||| |||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||    
T  28888451 atttatgcgtcatgattagggacatatcattattgcataagtcctatatgtgaaatgattgacatacttgtggttgtgaatatttggttgtgatgttgga 28888352  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttt 296  Q
    || ||| |||||||  ||||||||||| ||| ||||||| |||| ||||||||||||  || | |||||||||||||| ||||||||| | | | |||||    
T  28888351 tttatctttatgtattattgttgagatcaaacattcatgtcaatcatgtggaacttgaatt-gatttattcatgtcaattatttggaatttggattgttt 28888253  T
Q  297 tattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||| || |||||||||||||||||||||||||||    
T  28888252 tattcacgtctaactgttatgtggattatgatgatgt 28888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 37189664 - 37189938
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||| || | |||||||||||||||||||| |||||||||| ||||||| || |||    
T  37189664 ttacttcggtgattatgtaagacgggtgtgaaatattacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacttgcatt 37189763  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatat-ttga 196  Q
     |||||||||| ||||||||||||||  ||||| || |||||||| ||||| |||||||||||||||||||| ||||| |  |||| |||||||| | ||    
T  37189764 tatgtgtcatgtttagggacatatcattttgtttcatgagtcctaaatgtggaataattgacatacttgtggctgtgagtgattggttgtgatatctgga 37189863  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    || ||| || || |  ||| |||||||||| |||||||| ||||||| |||||||||  || ||||||||||||||    
T  37189864 tttatcattgtgaattattattgagattaattattcatgtcaattatttggaacttgaatt-gttttattcatgtc 37189938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 7727210 - 7727014
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  7727210 ttacttcggagattatgtaagatgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 7727111  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
     | |||||||| |||||||||||||| |||||||| ||||||||  |||| ||| |||||||||||||||||||||| |  |||| |||||||||||    
T  7727110 tacgtgtcatgattagggacatatcatttgttgcatgagtcctaattgtggaatgattgacatacttgtggttgtgagtgattggttgtgatatttg 7727014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 13793762 - 13793487
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| |||||| |||||| ||||||||| || | |||||| ||||||||||||| |||||||||| |||||||||| |||    
T  13793762 ttacttcggtgattatgtaagacgggtgtgagatcttatatacgatgtttttgttgcatcaaaggtgacgaccttgaggtgattcggtaccacatgcatt 13793663  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| ||||||||||||||  |||||||| |||||||||||||| |||||||| |||||||||||||| || |  |||| |||||||||| ||    
T  13793662 tatgtgtcatgtttagggacatatcattttgttgcatgagtcctatatgtggaataattgtcatacttgtggttgcgattgattggttgtgatatttgga 13793563  T
Q  197 ttcatcgttatgtaacatt-gttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
     | ||| ||||| |  |||  |||||||||| |||||||| ||||||| ||||| |||  |||| ||||||||||||    
T  13793562 cttatcattatgaattattatttgagattaattattcatgtcaattatttggaatttgaattgg-tttattcatgtc 13793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 32967708 - 32967960
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  32967708 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 32967807  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
     ||| |||||| |||||||||||  |  |||||||| |||||||| ||||| ||||||||||| ||||||||| |||| |  |||  |||||||| || |    
T  32967808 tatgcgtcatgtttagggacatagaattttgttgcaagagtcctaaatgtggaataattgacacacttgtggtcgtgagtgattgattgtgatatctgaa 32967907  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    || ||| |||||||  ||||||||| || | |||||||| ||||||| |||||    
T  32967908 tttatcattatgtattattgttgaggttgattattcatggcaattatctggaa 32967960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 27185364 - 27185472
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  27185364 ttacttcggagattatgtaagacgtgtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 27185463  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  27185464 tatgtgtca 27185472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24227003 - 24227098
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||| |||| |||||    
T  24227003 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtacgacatg 24227098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4863897 - 4863803
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacat 94  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||    
T  4863897 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacat 4863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21615644 - 21615549
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  21615644 ttacttcggtgattatgtaagacgggtgtgaaattttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 21615549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19860865 - 19860770
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||| | |||||||  ||||||||||    
T  19860865 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgtatcgaaggtgacgaccttggggtgatttggtaccacatg 19860770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 21661268 - 21661362
Alignment:
Q  15 atgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattcatgtgtca 108  Q
    |||||||||  ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||| | |||||||||| ||| ||||||||    
T  21661268 atgtaagactggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtca 21661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 333
Target Start/End: Complemental strand, 23492339 - 23492236
Alignment:
Q  228 tattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatga 327  Q
    |||||||| |||||||||| ||||||  ||| ||| ||||||||||| ||||||||| | | | |||||||||||||| |||||||||||||||||||||    
T  23492339 tattcatgtcaattatgtg-aacttgacttgattt-attcatgtcaattatttggaacttggattgttttattcatgtctaactgttatgtggattatga 23492242  T
Q  328 tgatgt 333  Q
    ||||||    
T  23492241 tgatgt 23492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 37189894 - 37189960
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgat 328  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||| ||||||||||||||||||||||    
T  37189894 ttattcatgtcaattatttggaacttgaattgttttattcatgtctaactgttatgtggattatgat 37189960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11964580 - 11964485
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||| ||| || ||||||||||||||||||| | ||| ||||| |||||||||||||| |||||| ||  ||||||||||    
T  11964580 ttacttcggtgataatgtaatacgggtttgaaatcttacatacgatgtttttgttgcattgaaggtgacgaccttgaggtggtttggtaccacatg 11964485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 13793531 - 13793464
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactg-ttatgtggattatgat 328  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||| |||||| ||||||||||||||||    
T  13793531 ttattcatgtcaattatttggaatttgaattggtttattcatgtctaactgtttatgtggattatgat 13793464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 32967938 - 32968008
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||| ||| ||||| | ||| ||||| |||||||| |||||| ||||||||||||||||||||    
T  32967938 ttattcatggcaattatctggaatttgaattgttt-attcatgtttaactgctatgtggattatgatgatgt 32968008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 78310 - 78046
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| || | |||||||||||||||||||| ||||||||     |||||||| |||    
T  78310 ttacttcggagattatgtaagatgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgat-----accacatgcatt 78216  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattc 199  Q
     |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||     
T  78215 tatgtgtcatgattagggacatatcattgttgcatgagtcctatatgtgagataattgacatacttgtggttgtgaatatttgaatgtgatatttgattt 78116  T
Q  200 atcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatg 270  Q
    ||| |||||||  ||||||||||||||||||||||| ||||| || ||||||||  || ||||||||||||    
T  78115 atcattatgtattattgttgagattaaatattcatgtcaattgtgaggaacttgaatt-gttttattcatg 78046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 78087 - 78017
Alignment:
Q  263 tattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||||| | |  |||| | ||| |||||||||||||  |||||| ||||||||||||||||||||    
T  78087 tattcatgtcaattgtgaggaacttgaattgttttattcatgcctaactgctatgtggattatgatgatgt 78017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 34197705 - 34198025
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  34197705 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 34197804  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgat 197  Q
     ||| |||||| ||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||              ||||||||| |||    
T  34197805 tatgcgtcatgtttagggacataacattttgttgcatgagtcctatatgtgaaataattgacatacttgtggt--------------tgtgatattggat 34197890  T
Q  198 tcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgtttt 297  Q
    | ||| |||||||  ||||||||||||||| ||||||| |||||||||||||||||  || | |||||||||||||| ||||||||| | | | ||||||    
T  34197891 ttatctttatgtattattgttgagattaaacattcatgtcaattatgtggaacttgaatt-gatttattcatgtcaattatttggaatttggattgtttt 34197989  T
Q  298 attcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||| |||||||||||||||||||||||||||    
T  34197990 attcatgtctaactgttatgtggattatgatgatgt 34198025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12245792 - 12245966
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  12245792 ttacttcggtgattatgtaagacgagtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 12245891  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttg 172  Q
     |||||||||| ||||||||||||||  |||||||| |||||||| ||||| |||||||||||||||||||||||    
T  12245892 tatgtgtcatgtttagggacatatcattttgttgcatgagtcctaaatgtggaataattgacatacttgtggttg 12245966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 27959661 - 27959465
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  27959661 ttacttcggagattatgtaagacgggtgtaaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 27959562  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
     |  ||||||| |||||||||||||| |||||||| ||||||||  |||| ||| |||||||||||||||||||||| |  |||| |||||||||||    
T  27959561 taaatgtcatgattagggacatatcatttgttgcatgagtcctaattgtggaatgattgacatacttgtggttgtgagtgattggttgtgatatttg 27959465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 37958597 - 37958794
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||| ||||| |||||||||| |||||||||| |||    
T  37958597 ttacttcagagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgatgaccttgaggtgattcggtaccacatgcatt 37958696  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
     ||| |||||| ||||||||||| ||  |||||||| |||||||| ||||||||| ||||||||||||||||||| || |  |||| |||||||||||    
T  37958697 tatgcgtcatgtttagggacataacattttgttgcatgagtcctaaatgtgaaatgattgacatacttgtggttgcgagtgattggttgtgatatttg 37958794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 15852856 - 15853053
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgat-gcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||    ||||||||||||||||||||| ||  | ||||||||||||||||||| |||||||||| |||||||||| |||    
T  15852856 ttacttcggagattatgtaagactttggtgaaatcttacatacgatgttttttttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 15852955  T
Q  100 catgtgtcatgcttagggacatatcatt--gttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
     ||||||||||  |||||||||| ||||  |||||| |||| ||| ||||| ||| |||||||||||||||||||||| |  || | |||||||||||    
T  15852956 tatgtgtcatgtctagggacataacattttgttgcatgagttctaaatgtggaatgattgacatacttgtggttgtgagtgatttgttgtgatatttg 15853053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 41167474 - 41167743
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||| | ||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  41167474 ttacttcggtgattatgtaagacgggtgtgaaatctcacatacgatgtttttgttacatcgaaggtgacgaccttgaggtgattcggtaccacatgtatt 41167573  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
      |||||     ||||||||||| ||  |||||||| |||| |||  |||| |||| ||||||||||||||||||||| |  |||  ||||||||||| |    
T  41167574 tgtgtgt-----ttagggacataacattttgttgcatgagttctaagtgtggaatagttgacatacttgtggttgtgagtgattgattgtgatatttgta 41167668  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    || ||| ||||| |  ||| |||||||| | || ||||| ||||||| |||||||||  || ||||||||||||||    
T  41167669 tttatcattatgaattattattgagattcattaatcatgtcaattatttggaacttgaatt-gttttattcatgtc 41167743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21961099 - 21961207
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  21961099 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 21961198  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  21961199 tatgtgtca 21961207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12901303 - 12901411
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  12901303 ttacttcggagattatgtaagacgggtgtgaaatattacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 12901402  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  12901403 tatgtgtca 12901411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 101 - 253
Target Start/End: Complemental strand, 5407671 - 5407516
Alignment:
Q  101 atgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-gat 197  Q
    ||||||||||  |||||||||| |||  ||| ||| |||||||| |||||||||||||||||||||||||| ||||| |  |||| |||||||||| |||    
T  5407671 atgtgtcatgtctagggacataccatattgtggcatgagtcctaaatgtgaaataattgacatacttgtggatgtgagtgattggttgtgatatttggat 5407572  T
Q  198 tcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    | ||| ||||| |  ||| |||||||||||||||||||  |||||| |||||||||    
T  5407571 ttatcattatgaattattattgagattaaatattcatgttaattatttggaacttg 5407516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8874024 - 8874132
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  8874024 ttacttcggagattatgtaagacgggtgtgaactcttacataagatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 8874123  T
Q  100 catgtgtca 108  Q
     || |||||    
T  8874124 tatttgtca 8874132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 7966232 - 7966343
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttgg 183  Q
    ||||| |||| ||| ||||||| || |||||||||||||||  ||||||  |||||| | |||||||||||||||||||||||||| ||||| |  ||||    
T  7966232 gtaccgcatgcatttatgtgtcgtgtttagggacatatcatattgttgcgtgagtccaaaatgtgaaataattgacatacttgtggatgtgagtgattgg 7966331  T
Q  184 atgtgatatttg 195  Q
     |||||||||||    
T  7966332 ttgtgatatttg 7966343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 110117 - 110010
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||||||||||||   || ||||  |||||||||| |||     
T  110117 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtgacgaccttttggagatttggtaccacatgcattt 110018  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  110017 atgtgtca 110010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14900109 - 14900026
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| |||| |||||||||  ||||||||||||||||||||| | ||| ||||||| |||||||||||| |||||||||    
T  14900109 ttacttcggtgattttgtaagacggatgtgaaatcttacatacgatgtttttgttgcatcggaggtgacgaccttgaggtgatt 14900026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 41167703 - 41167770
Alignment:
Q  266 tcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||||||||| | ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  41167703 tcatgtcaattatttggaacttgaattgttttattcatgtctaactgttatgtggattgtgatgatgt 41167770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 37958827 - 37958898
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||| ||||||||| | ||| |||| ||||||||| || ||| ||||||||||||||||||||    
T  37958827 ttattcatggcaattatttggaatttgaattgttctattcatgtctatctgctatgtggattatgatgatgt 37958898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 13595727 - 13595832
Alignment:
Q  149 aaataattgacatacttgtggttgtgaatatttggatgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtgg 247  Q
    |||||||||| |||||||||| ||||| |  |||| ||||||||||| ||| ||  ||||| |  ||| |||||||||||||||||||  |||||| |||    
T  13595727 aaataattgatatacttgtggatgtgagtgattggttgtgatatttggatttattattatgaattattattgagattaaatattcatgttaattatttgg 13595826  T
Q  248 aacttg 253  Q
    ||||||    
T  13595827 aacttg 13595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 43283256 - 43283293
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43283256 ttattcatgtctaactgttatgtggattatgatgatgt 43283293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 13448672 - 13448843
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||| ||||||  ||||||||||||||  ||| ||| ||||||||  ||||||| |||| || |||||||||| ||||| |  |||    
T  13448672 gtaccgcatgcatttatgcgtcatgtctagggacatatcatattgtggcatgagtcctagttgtgaaaataatggatatacttgtggatgtgagtggttg 13448771  T
Q  183 gatgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    | ||||||||||| ||| ||| | ||| |  ||| |||||||||||||||||||  |||||| | |||||||    
T  13448772 gttgtgatatttggatttatcataatgaattattattgagattaaatattcatgttaattatttagaacttg 13448843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47469873 - 47469920
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt 48  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  47469873 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgt 47469920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 41257889 - 41257983
Alignment:
Q  2 tacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||| | ||| |||||||||| ||||||||||||||||| |||  | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  41257889 tacttcagtgataatgtaagacgggtgtgaaatcttacatatgatatttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 41257983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 14867733 - 14867696
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  14867733 ttatttatgtttaactgttatgtggattatgatgatgt 14867696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 7e-77; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 48420300 - 48419965
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| | || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  48420300 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 48420201  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| ||||||||||| ||  |||||||| ||||| || ||||| ||| |||||||||||||||||||||| |  |||  |||||||||| ||    
T  48420200 tatgtgtcatgtttagggacataacattttgttgcatgagtcataaatgtggaatgattgacatacttgtggttgtgagtgattgattgtgatatttgga 48420101  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttt 296  Q
    || ||| |||||||  |||| ||||||||| |||||||| |||||||||||||||||  || | |||||||||||||| ||||||||| | | | |||||    
T  48420100 tttatcattatgtattattgatgagattaattattcatgtcaattatgtggaacttgaatt-gatttattcatgtcaattatttggaacttggattgttt 48420002  T
Q  297 tattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||| |||| |||||||| ||||||||||||||||||    
T  48420001 tatttatgtctaactgttttgtggattatgatgatgt 48419965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 12490269 - 12490521
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| ||| |||||| |||||||||| |||    
T  12490269 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgagatgattcggtaccacatgcatt 12490368  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| | ||||||||| ||  |||||||| |||||||| ||||| ||| |||||||||||||||||||||| | ||||| |||||||||| ||    
T  12490369 tatgtgtcatgttaagggacataacattttgttgcatgagtcctaaatgtggaatgattgacatacttgtggttgtgagtgtttggttgtgatatttgga 12490468  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    || ||| |||||||  |||| ||||||| | |||||||| |||||||||||||    
T  12490469 tttatcattatgtattattgatgagattgattattcatgtcaattatgtggaa 12490521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11330540 - 11330785
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| | ||| |||||| |||||||| |||| ||||||| || |||||||||| |||    
T  11330540 ttacttcggagattatgtaagacatgtgtgaaatcttacatacgatgtttttgttgcatcaaaggtgacaaccttgaggtgactcggtaccacatgcatt 11330639  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttga-t 197  Q
     |||||||||| ||||||| |||||| |||||||| ||||||||  |||||||| |||||||||||||||||||||| |  |||| |||||||||||| |    
T  11330640 tatgtgtcatgattagggatatatcatttgttgcatgagtcctaattgtgaaatgattgacatacttgtggttgtgagtgattggttgtgatatttgact 11330739  T
Q  198 tcatcgttatgtaacattgttgagattaaatattcatgccaattat 243  Q
    | ||| ||||||| ||||||||||||||| |||||||| |||||||    
T  11330740 ttatccttatgtatcattgttgagattaattattcatgtcaattat 11330785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 15874793 - 15874619
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  15874793 ttacttcagtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 15874694  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttg 172  Q
     |||||||||| ||||||||||| ||  |||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  15874693 tatgtgtcatgtttagggacataacattttgttgcatgagtcctaaatgtggaatgattgacatacttgtggttg 15874619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 18008669 - 18008866
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||| |||||||||||||| ||||||||||||||||||||| |||    
T  18008669 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcattgaaggtgacgaccttgaggtgattcagtaccacatgcatt 18008768  T
Q  100 catgtgtcatgcttagggacatatcatt--gttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg 195  Q
     ||| |||||| ||||| ||||| ||||  |||||| |||||||| ||||| ||| ||||||||||||||| |||||| |  |||  |||||||||||    
T  18008769 tatgcgtcatgtttaggaacataacattttgttgcatgagtcctagatgtggaatgattgacatacttgtgattgtgagtgattgtttgtgatatttg 18008866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12351376 - 12351484
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| |||||||||||| |||    
T  12351376 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccagtaccacatgcatt 12351475  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  12351476 tatgtgtca 12351484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 50113658 - 50113766
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttga-tgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||| | |||||||||| |||    
T  50113658 ttacttcggagattatgcaagacgggtgtgaaatcttacatacgatgtttttattgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 50113757  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  50113758 tatgtgtca 50113766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7852436 - 7852353
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||||||||| |||||||||    
T  7852436 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtttttgttggatcgaaggtgacgaccttgaggtgatt 7852353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 55442298 - 55442477
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggt---gacgacctggaggtgattcagtaccacatgt 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| | ||| ||||| ||||||   |||||||| ||||||||   ||||||||||     
T  55442298 ttacttcggagattatgtaaggcgggtgtgaaatcttacatacgatgtttttgttgcattgaaggtgacgacgaccttgaggtgatctggtaccacatgc 55442397  T
Q  97 attcatgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatg-tgaaataattgacatacttgtggttgtga 175  Q
    ||| |||||||||| ||||||||||| || ||||||||  ||||||| ||| || ||| ||||| |||||| |||||||||    
T  55442398 atttatgtgtcatgattagggacataacatttgttgcataagtccta-atgatggaatgattgatatacttatggttgtga 55442477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 319144 - 319252
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||||| ||||||||   |||||||||| |||    
T  319144 ttacttcggaaattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatctggtaccacatgcatt 319243  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  319244 tatgtgtca 319252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8630475 - 8630367
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |   |  |||||||||||||||||||||||||||||  |||||||||| |||    
T  8630475 ttacttcggagattatgtaagatgggtgtgaaatcttacatacgatgttcaagtggcatcgaaggtgacgacctggaggtgatttggtaccacatgcatt 8630376  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  8630375 tatgtgtca 8630367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47983527 - 47983431
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||| ||||||||||    
T  47983527 ttacttcggatattatgtaagaccgggtgtgaaatcttacatacgatctgtttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatg 47983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47992814 - 47992718
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||| ||||||||||    
T  47992814 ttacttcggatattatgtaagaccgggtgtgaaatcttacatacgatctgtttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatg 47992718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 48002101 - 48002005
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||| ||||||||||    
T  48002101 ttacttcggatattatgtaagaccgggtgtgaaatcttacatacgatctgtttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatg 48002005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 48011387 - 48011291
Alignment:
Q  1 ttacttcggagattatgtaagac-gagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||| |||||||||| ||||||||||    
T  48011387 ttacttcggatattatgtaagaccgggtgtgaaatcttacatacgatctgtttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatg 48011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5229613 - 5229708
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  5229613 ttacttcggtgataatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 5229708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 47786401 - 47786496
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||  |||| ||||||    
T  47786401 ttactttggagattatgtaagacggatgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatatagtaacacatg 47786496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38812528 - 38812610
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgatt 83  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||| || | |||||||||||||||||||| |||||||||    
T  38812528 ttacttcggagattatgtaagacggg-gtgaaatattacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatt 38812610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 253
Target Start/End: Original strand, 33371042 - 33371170
Alignment:
Q  126 ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatt-tgattcatcgttatgtaacattgttgagatt 224  Q
    |||| ||| |||||||| |||||||||||||||||||||||||| ||||| |  |||| | |||||||  |||| ||| ||||| |  ||| ||||||||    
T  33371042 ttgtggcatgagtcctaaatgtgaaataattgacatacttgtggatgtgagtgattggttttgatattcggatttatcattatgaattattattgagatt 33371141  T
Q  225 aaatattcatgccaattatgtggaacttg 253  Q
    |||||||||||  |||||| |||||||||    
T  33371142 aaatattcatgttaattatttggaacttg 33371170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 11330769 - 11330840
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||| ||| ||| | ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  11330769 ttattcatgtcaattatctgggactggaattactttattcatgtataactgttatgtggattatgatgatgt 11330840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 12490568 - 12490672
Alignment:
Q  228 tattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatga 327  Q
    |||||||| ||||||||||||| |||  ||| ||| ||||||||||| ||||||||| | | | ||| |||||| ||  |||||||||||||||||||||    
T  12490568 tattcatgtcaattatgtggaatttgaattgattt-attcatgtcaattatttggaacttggattgtattattcgtgcttaactgttatgtggattatga 12490666  T
Q  328 tgatgt 333  Q
    ||||||    
T  12490667 tgatgt 12490672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2048697 - 2048623
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt--gttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||  |||| | ||||||||||||||||||    
T  2048697 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgagttgttccatcgaaggtgacgacct 2048623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 15874577 - 15874506
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| | ||||| ||| | ||| | |||||||||||| |||||||||||||||||||||||||||    
T  15874577 ttattcatgtcgattatttagaacttgaattattttattcatgtctaactgttatgtggattatgatgatgt 15874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 15548865 - 15548828
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15548865 ttattcatgtataactgttatgtggattatgatgatgt 15548828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23491143 - 23491033
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  23491143 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 23491044  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  23491043 tttatgtgtca 23491033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9592286 - 9592381
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||| | |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  9592286 ttacttcggtgataatgtaagacgggtgtgaaatcttacacatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 9592381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14060773 - 14060856
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    |||||||||||||||||||||| | | ||||| |||||||| ||||  | ||| |||||| ||||||||||||| |||||||||    
T  14060773 ttacttcggagattatgtaagatgggggtgaactcttacattcgatatttttgttgcatcaaaggtgacgaccttgaggtgatt 14060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 10737192 - 10737086
Alignment:
Q  2 tacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattca 101  Q
    |||||| ||||||||||||| || |||||||  |||||||||||||||||    ||||||||||| ||||||   || ||||  |||||||||| ||| |    
T  10737192 tacttcagagattatgtaaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtggcgaccttttggagatttggtaccacatgaattta 10737093  T
Q  102 tgtgtca 108  Q
    |||||||    
T  10737092 tgtgtca 10737086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5227353 - 5227281
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  ||||||||| |||||||    ||||||| ||||||||||    
T  5227353 ttacttcggagattatgtaaggcgggtgtgaacccttacatacaatgtgttttatcatcgaatgtgacgacct 5227281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19230688 - 19230616
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg-ttgatgcatcg-aaggtgacgac 71  Q
    |||||||||||||||||||||  | |||||||  ||||||||||||||| ||||| ||||| |||||||||||    
T  19230688 ttacttcggagattatgtaaggtgggtgtgaacccttacatacgatgtgtttgattcatcgaaaggtgacgac 19230616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 33370914 - 33370994
Alignment:
Q  15 atgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||| ||||||||||||||||| ||| | ||| |||| |   ||||||||||| |||||||||  ||||||||||    
T  33370914 atgtaagacgggtgtgaaatcttacatatgattttttgttgcaccatgggtgacgaccttgaggtgatttggtaccacatg 33370994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14846182 - 14846289
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||||||||  | | |||||  |||||||||||||||||    ||||| ||||||||||||   || ||||  |||||||||| |||     
T  14846182 ttacttcggagattatgtaaggggggggtgaacccttacatacgatgtgttttatcatcggaggtgacgaccttttggagatttggtaccacatgcattt 14846281  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  14846282 atgtgtca 14846289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 18008899 - 18008970
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||| ||||||||| | ||| |||| |||| |||  |||||| ||||||||||||||||||||    
T  18008899 ttattcatggcaattatttggaatttgaattgttctattgatgactaactgctatgtggattatgatgatgt 18008970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 15515963 - 15515925
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  15515963 tttattcatgtttaactgctatgtggattatgatgatgt 15515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 11381115 - 11381082
Alignment:
Q  300 tcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||| |||||||||||||||||||||||||||    
T  11381115 tcatgtctaactgttatgtggattatgatgatgt 11381082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 14061073 - 14061110
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||  |||||||||||||||||||||||||||    
T  14061073 ttattcatgcttaactgttatgtggattatgatgatgt 14061110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 17137736 - 17137699
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||  |||||||||||||||||||||||||||    
T  17137736 ttattcatggttaactgttatgtggattatgatgatgt 17137699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 39654200 - 39654163
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||  |||||||||||||||||||||||||||    
T  39654200 ttattcatgcttaactgttatgtggattatgatgatgt 39654163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 325178 - 325206
Alignment:
Q  144 atgtgaaataattgacatacttgtggttg 172  Q
    |||||||||||||||||||||||||||||    
T  325178 atgtgaaataattgacatacttgtggttg 325206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 11637005 - 11636893
Alignment:
Q  125 attgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttggatgtgata-tttgattcatcgttatgtaacattgttgaga 222  Q
    ||||| ||| ||||||||  ||||||| ||||||| ||||||||||||||||    |||| ||||||| || |||| ||| ||||| |  ||| ||||||    
T  11637005 attgtggcatgagtcctaattgtgaaaataattgatatacttgtggttgtgagggattggttgtgatacttggatttatcattatgaattattattgaga 11636906  T
Q  223 ttaaatattcatg 235  Q
    |||||||||||||    
T  11636905 ttaaatattcatg 11636893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33340480 - 33340370
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||| ||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  33340480 ttacttcagagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 33340381  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  33340380 tttatgtgtca 33340370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 131; Significance: 6e-68; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 106456 - 106710
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  106456 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 106555  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-gatt 198  Q
     |||||||||| |||||||||||||||||||||| |||||||    ||||||| |||||||||||||||||||||| |  |||| |||||||||| ||||    
T  106556 tatgtgtcatgattagggacatatcattgttgcatgagtcctcatcgtgaaatgattgacatacttgtggttgtgagtgattggttgtgatatttggatt 106655  T
Q  199 catcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
     ||| |||||||  |||||||||||||| |||||||| ||||||| ||| |||||    
T  106656 tatcattatgtattattgttgagattaattattcatgtcaattatttgggacttg 106710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 106684 - 106755
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||| ||||||| | | ||| || |||||||||||||||||||||||||||||||||||||||    
T  106684 ttattcatgtcaattatttgggacttgaattgctttattcatgtataactgttatgtggattatgatgatgt 106755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 130517 - 130422
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| | |||||||  ||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  130517 ttacttcggtgataacgtaagaccggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 130422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 118141 - 118413
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||| |  |||||||||||||||||||||| || | || ||||||||||||||||| ||||||||||||||||||||| ||     
T  118141 ttacttcggtgattatgtaagatggctgtgaaatcttacatacgatgtttttgttgaatcgaaggtgacgaccttgaggtgattcagtaccacatgcata 118240  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgattc 199  Q
     |||||||||| |||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||| ||||||| ||||| ||||||||||||||     
T  118241 tatgtgtcatgtttagggacatatcattgttgcatgagtcctaaatgttgaataattgacatacttgtggctgtgaatgtttggttgtgatatttgattt 118340  T
Q  200 a-tcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    | ||  |||||   |||||||||||||| |||||||| ||||||| | ||| || |  ||||||||||||||||    
T  118341 attcactatgtgttattgttgagattaattattcatgtcaattat-ttgaaatttgaatggttttattcatgtc 118413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 118369 - 118440
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||| |||||| || | |||  ||||||||||||| |||||||||||||||||||||||||||    
T  118369 ttattcatgtcaattatttgaaatttgaatggttttattcatgtctaactgttatgtggattatgatgatgt 118440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 21192281 - 21192555
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||  ||||||||| |||||||||| |||    
T  21192281 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttaaggtgattcggtaccacatgcatt 21192380  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
     |||||||||| ||||||||||||||  |||||||| |||||||| ||||| |||||||||||||||||||||||||| |  |||| || |||||||| |    
T  21192381 tatgtgtcatgtttagggacatatcattttgttgcatgagtcctaaatgtggaataattgacatacttgtggttgtgagtgattggttgcgatatttgta 21192480  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    || ||| ||||| |  ||| |||||||| | ||||| || ||||||| |||||||||  || ||||||||||||||    
T  21192481 tttatcattatgaattattattgagattcattattcgtgtcaattatttggaacttgaatt-gttttattcatgtc 21192555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 21199708 - 21199964
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||| || |||||||||| |||||||||| |||    
T  21199708 ttacttcagtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgagcttgaggtgattcggtaccacatgcatt 21199807  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-a 196  Q
     |||||| ||| ||||||||||||||  |||||||| |||||||| ||||| |||||||||||||||||||||||||| |  |||| ||||||||||| |    
T  21199808 tatgtgtgatgtttagggacatatcattttgttgcatgagtcctaaatgtggaataattgacatacttgtggttgtgagtgattggttgtgatatttgta 21199907  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
    || ||| ||||| |  ||| |||||||| | |||||||| ||||||| |||||||||    
T  21199908 tttatcattatgaattattattgagattcattattcatgtcaattatttggaacttg 21199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 39448357 - 39448549
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  39448357 ttacttcggagattatgtaagactggtgtgaaatcttacacacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 39448456  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatat 192  Q
     |||||||||| |||||||||||||||||||||| |||||||   |||||||| |||||||||||||||||||||| |  |||| ||||||||    
T  39448457 tatgtgtcatgattagggacatatcattgttgcatgagtccttattgtgaaatgattgacatacttgtggttgtgagtgattggttgtgatat 39448549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 23835848 - 23835565
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||| || | |||||||||||||||||||| |||||| ||| |||||||||| |||    
T  23835848 ttacttcggtgattatgtaagacgggtgtaaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtg-ttcggtaccacatgcatt 23835750  T
Q  100 catgtgtcatgcttagggacatatcatt--gttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| ||||||||||||||||  |||||| |||||||| ||||| ||||||||||||||||||||||| || |  |||| |||||||||| ||    
T  23835749 tatgtgtcatgtttagggacatatcattttgttgcatgagtcctaaatgtggaataattgacatacttgtggttgcgagtgattggttgtgatatttgga 23835650  T
Q  197 ttcatcgttatgtaacatt-gttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc-aactattt 280  Q
    || ||| ||||| | ||||  || ||||||| |||||||| ||||||| ||||| |||  |||| |||||||||||| ||||||||    
T  23835649 tttatcattatgaatcattatttaagattaattattcatgtcaattatttggaatttgaattgg-tttattcatgtctaactattt 23835565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21696189 - 21696020
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||| || | |||||||||||||||||||| |||||||| | |||||||||| |||    
T  21696189 ttacttcggagattatgtaaaacgggtgtgaaatcttacatacaatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 21696090  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtg 168  Q
     |||||||||| |||||||||||||| |||||||| ||| ||||  |||||||| |||||||||||||||    
T  21696089 tatgtgtcatgattagggacatatcatttgttgcatgagacctaattgtgaaatgattgacatacttgtg 21696020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41244265 - 41244170
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  41244265 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 41244170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 37655181 - 37655264
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  37655181 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatt 37655264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41245292 - 41245210
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgat 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  | ||| |||||||||||||||||||| ||||||||    
T  41245292 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgat 41245210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31195819 - 31195914
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||  ||||||||  ||||||||||    
T  31195819 ttacttcggagattatgtaagacgggcgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttaaggtgatttggtaccacatg 31195914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 37605618 - 37605513
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgac-gacctggaggtgattcagtaccacatgtattcat 102  Q
    |||||||||||||||||||| ||||||||||||||||| |||  | ||| ||||||||||||||| ||||| |||||||| | |||||||||| ||| ||    
T  37605618 ttcggagattatgtaagacgggtgtgaaatcttacatatgatatttttgttgcatcgaaggtgacagaccttgaggtgatccggtaccacatgcatttat 37605519  T
Q  103 gtgtca 108  Q
    ||||||    
T  37605518 gtgtca 37605513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 21199938 - 21200009
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||| ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  21199938 ttattcatgtcaattatttggaacttgaattgttttatccatgtctaactgttatgtggattatgatgatgt 21200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 21192511 - 21192582
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||| |||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||| ||||    
T  21192511 ttattcgtgtcaattatttggaacttgaattgttttattcatgtctaactgttatgtggattatgataatgt 21192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16203858 - 16203932
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg--ttgatgcatcgaaggtgacgacct 73  Q
    ||||||| ||||||||||||| || |||||||  |||||||||||||||  ||||| ||||||||||||||||||    
T  16203858 ttacttcagagattatgtaaggcgggtgtgaacccttacatacgatgtgaattgatccatcgaaggtgacgacct 16203932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22498838 - 22498933
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  22498838 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 22498933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33612596 - 33612691
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  33612596 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 33612691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 21233664 - 21233817
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||||||||||  ||||| ||||||||  ||| ||| ||||||||  | ||||| ||||||| ||||||| |||||||| || |||    
T  21233664 gtaccgcatgcatttatgtgtcatgtctaggggcatatcatattgtggcatgagtcctaattttgaaaataattgatatacttgcggttgtgagtaattg 21233763  T
Q  183 gatgtgata-tttgattcatcgttatgtaacattgttgagattaaatattcatg 235  Q
    | ||||||| ||||||| ||| ||||| |  ||| |||||||||||||||||||    
T  21233764 gttgtgatactttgatttatcattatgaattattattgagattaaatattcatg 21233817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23116355 - 23116481
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| || ||||||  |||||||||| ||     
T  23116355 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgatgtgatttggtaccacatgcata 23116454  T
Q  100 catgtgtcatgcttagggacatatcat 126  Q
     |||||||| |  |||| |||||||||    
T  23116455 tatgtgtcaagtataggcacatatcat 23116481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 33170890 - 33170798
Alignment:
Q  4 cttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  33170890 cttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 33170798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23153344 - 23153394
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt 51  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  23153344 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtgtt 23153394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 20708264 - 20708159
Alignment:
Q  149 aaataattgacatacttgtggttgtgaatatttggatgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtgg 247  Q
    |||||||||| |||||||||| ||||| |  |||| ||||||| ||| ||| ||| ||||| |  ||| |||||||||||||||||||  |||||| |||    
T  20708264 aaataattgatatacttgtggatgtgagtgattggttgtgatacttggatttatcattatgaattattattgagattaaatattcatgttaattatttgg 20708165  T
Q  248 aacttg 253  Q
    ||||||    
T  20708164 aacttg 20708159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 37609992 - 37609955
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacata 42  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37609992 ttcggagattatgtaagacgggtgtgaaatcttacata 37609955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22312298 - 22312251
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt 48  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  22312298 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgt 22312251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 23835618 - 23835551
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataact-gttatgtggattatgat 328  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||| |||||  ||||||||||||||||    
T  23835618 ttattcatgtcaattatttggaatttgaattggtttattcatgtctaactatttatgtggattatgat 23835551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29758930 - 29758856
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg--ttgatgcatcgaaggtgacgacct 73  Q
    |||||||||||||| |||||| || |||||||  ||||||||| |||||  ||| | ||||||||||||||||||    
T  29758930 ttacttcggagattttgtaaggcgggtgtgaacccttacatacaatgtgatttgttccatcgaaggtgacgacct 29758856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 18768653 - 18768691
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18768653 tttattcatgcttaactgttatgtggattatgatgatgt 18768691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 21695935 - 21695899
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21695935 ttattcatgt-taactgttatgtggattatgatgatgt 21695899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 25294576 - 25294535
Alignment:
Q  54 tgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||| |||||||||  ||||||||||    
T  25294576 tgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 25294535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 25756565 - 25756524
Alignment:
Q  54 tgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||| |||||||||  ||||||||||    
T  25756565 tgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 25756524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 39448610 - 39448646
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  39448610 ttattcatgt-taactgttatgtggattatgatgatgt 39448646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 22737798 - 22737834
Alignment:
Q  297 tattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  22737798 tattcatgtttaactgttatgtagattatgatgatgt 22737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 78369 - 78545
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| |||| ||||||||||||||||||||| |||    
T  78369 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacaaccttgaggtgattcagtaccacatgcatt 78468  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtga 175  Q
     |||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  78469 tatgtgtcatgtttagggacatatcatttgttgcatgagtcctaaatgtggaataattgacatacttgtggttgtga 78545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 4889 - 5086
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| || | |||||| ||||||||||||| |||||||||| |||||||||| |||    
T  4889 ttacttcggagattatgtatgacgggtgtgaaatcttacatacgatgtttttgttgcatc-aaggtgacgaccttgaggtgattcggtaccacatgcatt 4987  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttgatt 198  Q
     |||||||||| ||| |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||| || || ||||| ||||||||||||||    
T  4988 tatgtgtcatgtttaaggacatataattgttgcatgagtcctaaatgtggaataattgacatacttgtggttatgtatgtttggttgtgatatttgatt 5086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 5151 - 5255
Alignment:
Q  228 tattcatgccaattatgtggaacttgggttggttttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatga 327  Q
    |||| ||| ||||||||| |||||||  ||| ||| ||||||||||  ||||||||| | ||| |||||||||||||  ||||||||||||||| |||||    
T  5151 tattaatggcaattatgtagaacttgaattgattt-attcatgtcacttatttggaacttgaattgttttattcatgcctaactgttatgtggaatatga 5249  T
Q  328 tgatgt 333  Q
    ||||||    
T  5250 tgatgt 5255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 109; Significance: 8e-55; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 7200 - 7392
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  7200 ttacttcggagattatgtaagactggtgtgaaatcttacacacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 7299  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatat 192  Q
     |||||||||| |||||||||||||||||||||| ||||||||  || ||||| |||||||||||||||||||||| |  |||| ||||||||    
T  7300 tatgtgtcatgattagggacatatcattgttgcatgagtcctaattgcgaaatgattgacatacttgtggttgtgagtgattggttgtgatat 7392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 7453 - 7489
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7453 ttattcatgt-taactgttatgtggattatgatgatgt 7489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 34101 - 33826
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||  ||||||||| ||||||||||||| || | |||||||||||||||||| | |||||||||| ||||||||||||||    
T  34101 ttacttcggtgattatgtaagacaggtgtgaaatgttacatacgatgtttttgttgcatcgaaggtgacgactttgaggtgattcggtaccacatgtatt 34002  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctata-tgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-g 195  Q
     |||||||||| ||||||| ||||||  |||||||| |||||||| | |||| ||||||||||||||||||||||| || |  |||| ||||| |||| |    
T  34001 tatgtgtcatgtttagggatatatcattttgttgcatgagtcctaaattgtggaataattgacatacttgtggttgcgagtgattggttgtgacatttgg 33902  T
Q  196 attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    ||| ||| ||||| |  ||| |||||||||| |||||||| ||||||| |||||||||  |||| ||||||||||||    
T  33901 atttatcattatgaattattattgagattaattattcatgtcaattatttggaacttgaattgg-tttattcatgtc 33826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 33870 - 33803
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactg-ttatgtggattatgat 328  Q
    ||||||||||||| ||||||||| | ||| || ||||||||||| |||||| ||||||||||||||||    
T  33870 ttattcatgtcaattatttggaacttgaattggtttattcatgtctaactgtttatgtggattatgat 33803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 15913968 - 15914223
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  15913968 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 15914067  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtg---aaataattgacatacttgtggttgtgaatatttggatgtgatattt 194  Q
     ||| |||||||||||||||||| ||  |||||||| |||||||| |||||    ||| |||||||||||||||||| ||| |  |||| ||||||||||    
T  15914068 tatgcgtcatgcttagggacataacattttgttgcatgagtcctaaatgtggaacaatgattgacatacttgtggttatgagtgattggttgtgatattt 15914167  T
Q  195 g-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    | ||| | | |||||||  ||||||||| || | |||||||| ||||||| |||||    
T  15914168 gaatttaccattatgtattattgttgaggttgattattcatggcaattatttggaa 15914223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 13376302 - 13376029
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||| || | |||||||||||||||||||| |||||||||| |||||| ||| |||    
T  13376302 ttacttcggtgattatgtaagacg-gtgtgaaatcttacatatgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccatatgcatt 13376204  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     |||||||||| ||||||||||| ||  |||||||| |||||||| ||||| |||  |||||||||||| |||||| |    || | |||||||||| ||    
T  13376203 tatgtgtcatgtttagggacataacattttgttgcatgagtcctaaatgtggaatggttgacatacttgcggttgtcagggattagttgtgatatttgga 13376104  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaacttgggttggttttattcatgtc 272  Q
    || ||| |||||||  |||||||||||||| |||||||| ||||||| |||||||||  || ||||||||||||||    
T  13376103 tttatcattatgtattattgttgagattaattattcatgtcaattatttggaacttgaatt-gttttattcatgtc 13376029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 13388596 - 13388410
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgt-tgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| | || |||||||||||||||||||| |||||||||| |||||||||| |||    
T  13388596 ttacttcggtgattatgtaatacgggtgtgaaatcttacatacgatgtttctgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 13388497  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggat 185  Q
     |||||||||| ||||||||||||||  |||||||| |||||||| || || |||||||| |||||||||||||||| ||||||||||    
T  13388496 tatgtgtcatgtttagggacatatcattttgttgcatgagtcctaaatatggaataattggcatacttgtggttgtg-atatttggat 13388410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9058168 - 9058263
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  9058168 ttacttcggtgattatgtaagacgagtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 9058263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3893726 - 3893618
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  3893726 ttacttcggagattatgtaagacaggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 3893627  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  3893626 tatgtgtca 3893618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12753512 - 12753404
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||| |||    
T  12753512 ttacttcggaaattatgtaagacgggtgtgaaatcttaaatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatgcatt 12753413  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  12753412 tatgtgtca 12753404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 45453791 - 45453896
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||  | ||| |||||||||||||| ||||| |||||||| | |||||||||| |||     
T  45453791 ttacttcggagattatgtaagacggatgtgaaatcttacatacga--ttttgttgcatcgaaggtgatgaccttgaggtgatccggtaccacatgcattt 45453888  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  45453889 atgtgtca 45453896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 112830 - 112939
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggt---gacgacctggaggtgattcagtaccacatgt 96  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||||   |||||||| |||||||||| ||||||||||     
T  112830 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgacgaccttgaggtgattcggtaccacatgc 112929  T
Q  97 attcatgtgt 106  Q
    ||| ||||||    
T  112930 atttatgtgt 112939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26071799 - 26071894
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| |  |||||||||    
T  26071799 ttacttcagagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccgataccacatg 26071894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26095586 - 26095681
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| |  |||||||||    
T  26095586 ttacttcagagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccgataccacatg 26095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 13376073 - 13376002
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||    
T  13376073 ttattcatgtcaattatttggaacttgaattgttttattcatgtctaactgttatgtggattatgatgatgt 13376002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15761893 - 15761965
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||||||||||||    
T  15761893 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtgacgacct 15761965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8565114 - 8565209
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttga-tgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| ||||| || | ||||||   ||||||||||| |||||||||  ||||||||||    
T  8565114 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttattgcatcatgggtgacgaccttgaggtgatttggtaccacatg 8565209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 15914201 - 15914272
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||| ||||||||| | ||| ||||||||| |||| ||||||||||||||||||| |||||||    
T  15914201 ttattcatggcaattatttggaatttgaattgttttattgatgtctaactgttatgtggattataatgatgt 15914272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3058687 - 3058582
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||| |||| || |||||||  |||||||||||||||||    ||||||||||||||||||   || ||||  |||||||||| |||     
T  3058687 ttacttcggagattatataaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtgacgaccttttggagatttggtaccacatgcattt 3058588  T
Q  101 atgtgt 106  Q
    ||||||    
T  3058587 atgtgt 3058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 125466 - 125392
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg--ttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||| ||  |||||||||||||||  ||| | ||||||||||||||||||    
T  125466 ttacttcggagattatgtaaggcgggtgtaaacccttacatacgatgtgatttgttccatcgaaggtgacgacct 125392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1938303 - 1938410
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    |||||||||||||||||||||  | |||||||  |||||||||||||||||    |||| |||||||||||||   || ||||  |||||||||| |||     
T  1938303 ttacttcggagattatgtaaggtgggtgtgaacccttacatacgatgtgttttatcatcaaaggtgacgaccttttggagatttggtaccacatgcattt 1938402  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  1938403 atgtgtca 1938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 9641518 - 9641413
Alignment:
Q  149 aaataattgacatacttgtggttgtgaatatttggatgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtgg 247  Q
    |||||||||| |||||||||| ||||| |  |||| ||||||||||| ||| ||  ||||| |  ||| |||||||||||||||||||  |||||| |||    
T  9641518 aaataattgatatacttgtggatgtgagtgattggttgtgatatttggatttattattatgaattattattgagattaaatattcatgttaattatttgg 9641419  T
Q  248 aacttg 253  Q
    ||||||    
T  9641418 aacttg 9641413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2027196 - 2027122
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt--gttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||  |||| | ||||| ||||||||||||    
T  2027196 ttacttcggagattatgtaagtcgggggtgaacccttacatacgatgtgagttgttccatcggaggtgacgacct 2027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9322600 - 9322695
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||| | ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| || ||||||  ||||||||||    
T  9322600 ttacttcagtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgatgtgatttggtaccacatg 9322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 13388380 - 13388313
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgtt-atgtggattatgat 328  Q
    ||||||| ||||| ||||||||| | ||| || ||||||||||| |||||||| ||||||||||||||    
T  13388380 ttattcacgtcaattatttggaacttgaattggtttattcatgtctaactgttcatgtggattatgat 13388313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 11285385 - 11285348
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  11285385 ttattcatgtttaactgttatgtggattatcatgatgt 11285348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 13868044 - 13868080
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13868044 ttattcatgt-taactgttatgtggattatgatgatgt 13868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 15629040 - 15629004
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15629040 ttattcatgt-taactgttatgtggattatgatgatgt 15629004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 49049687 - 49049723
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  49049687 ttattcatgt-taactgttatgtggattatgatgatgt 49049723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4483358 - 4483318
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacat 41  Q
    ||||||||| ||| |||||||||| ||||||||||||||||    
T  4483358 ttacttcggtgataatgtaagacgggtgtgaaatcttacat 4483318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32496079 - 32496189
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||  || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  32496079 ttacttcggagattatgtaacgcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 32496178  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  32496179 tttatgtgtca 32496189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 38035157 - 38035409
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| || | ||||||||| |||||||||| |||||||||| |||||||||| |||    
T  38035157 ttacttcggagattatgtaaaacgggtgtgaaatcttacatacgatgtttttgttgcatcgaatgtgacgaccttgaggtgattcggtaccacatgcatt 38035256  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgata-tttga 196  Q
     ||||||| || ||||||||||| ||  |||||||| |||||||| ||||| ||| ||||||||||||||| |||||| |  |||| ||||||| || ||    
T  38035257 tatgtgtcttgtttagggacataacattttgttgcatgagtcctaaatgtggaatgattgacatacttgtgattgtgagtgattggttgtgatacttgga 38035356  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    ||  || |||||||  ||||||||||||||  ||||||| ||||||| |||||    
T  38035357 tttgtcattatgtattattgttgagattaatcattcatgtcaattatttggaa 38035409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 36357873 - 36358125
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| |||||||||||||||  | |||||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||| |||||||||| |||    
T  36357873 ttacttcagagattatgtaagactggagtgaaatcttacatacgatgtttttgttgcatcgaagatgacgaccttgaggtgattcggtaccacatgcatt 36357972  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtga-tatttga 196  Q
     ||||||||||  |||||||||| ||  |||||||| |||||||  ||||| ||| |||||||||||||||||||||| |  |||| ||||| | || ||    
T  36357973 tatgtgtcatgtctagggacataacattttgttgcatgagtcctgaatgtggaatgattgacatacttgtggttgtgagtgattggttgtgattcttgga 36358072  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    ||  || |||||||  ||||||||||||||  ||||||| ||||||| |||||    
T  36358073 tttgtcattatgtattattgttgagattaatcattcatgtcaattatttggaa 36358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13378297 - 13378446
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  13378297 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 13378396  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtg 148  Q
     | |||||||| |||||||||||||| |||||||| |||||||| |||||    
T  13378397 taggtgtcatgtttagggacatatcatttgttgcatgagtcctaaatgtg 13378446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 19601811 - 19601560
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||  ||||||||||||||  |||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  19601811 ttacttcgttgattatgtaagacggatgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 19601712  T
Q  100 catgtgtcatgcttagggacatatca--ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatattt-ga 196  Q
     || ||||||| ||||||||||| ||  |||| |||  ||||||| ||||||||| ||||||||||||||| || ||| |  || | |||||||||| ||    
T  19601711 tatatgtcatgtttagggacataacattttgtcgcataagtcctaaatgtgaaatgattgacatacttgtgattctgagtgatt-gttgtgatatttgga 19601613  T
Q  197 ttcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
    || | | |||||||  ||||||||| || | |||||||| ||||||| |||||    
T  19601612 tttaccattatgtattattgttgaggttgattattcatggcaattatttggaa 19601560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41218080 - 41217982
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtat 98  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||||||    
T  41218080 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgtat 41217982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 35053461 - 35053361
Alignment:
Q  9 gagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattcatgtgtc 107  Q
    |||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| ||| |||||||    
T  35053461 gagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 35053362  T
Q  108 a 108  Q
    |    
T  35053361 a 35053361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5676137 - 5676245
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| | ||| ||||| |||||||||||||| |||||||| | |||||||||| |||    
T  5676137 ttacttcagagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcattgaaggtgacgaccttgaggtgatacggtaccacatgcatt 5676236  T
Q  100 catgtgtca 108  Q
     ||| ||||    
T  5676237 tatgagtca 5676245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21193797 - 21193689
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||| |||| |||||||||  |||||||||| ||     
T  21193797 ttacttcggtgataatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacaaccttgaggtgatttggtaccacatgcata 21193698  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  21193697 tatgtgtca 21193689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37235497 - 37235605
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||| ||     
T  37235497 ttacttcggtgattatgtaagacggatgtgaaatcttaaatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatgcata 37235596  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  37235597 tatgtgtca 37235605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8539495 - 8539578
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  8539495 ttacttcggtgattatgtaagacggatgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatt 8539578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8604734 - 8604817
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  8604734 ttacttcggtgattatgtaagacggatgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatt 8604817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 36358105 - 36358174
Alignment:
Q  264 attcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||    
T  36358105 attcatgtcaattatttggaatttgaaatgttttattcatgtctaactgttatgtggattatgatgatgt 36358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 38035389 - 38035458
Alignment:
Q  264 attcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| ||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||    
T  38035389 attcatgtcaattatttggaatttgaaatgttttattcatgtctaactgttatgtggattatgatgatgt 38035458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 18164685 - 18164543
Alignment:
Q  114 agggacatatcat--tgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttggatgtgatatttg-attcatcgttatgta 210  Q
    |||||||||||||  ||| ||| |||||||| |||||||||||||||||||||||||| ||||| |  |||  ||||||||||| ||| ||| ||||| |    
T  18164685 agggacatatcatattgtggcatgagtcctaaatgtgaaataattgacatacttgtggatgtgagtgattgattgtgatatttgaatttatcattatgaa 18164586  T
Q  211 acattgttgagattaaatattcatgccaattatgtggaacttg 253  Q
     |||| |||||||||| |||| |||  |||||| |||||||||    
T  18164585 tcattattgagattaattatttatgttaattatttggaacttg 18164543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 19601582 - 19601511
Alignment:
Q  262 ttattcatgtcaactatttggaaatggaactgttttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||| ||| ||||||||| | ||| ||||| |||||||| |||||||||||||||||||||||||||    
T  19601582 ttattcatggcaattatttggaatttgaattgtttcattcatgtctaactgttatgtggattatgatgatgt 19601511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20444374 - 20444301
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg-ttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || |||||||  |||||||| |||||| ||||| ||||||||||||||||||    
T  20444374 ttacttcggagattatgtaaggcgggtgtgaacccttacataagatgtgtttgattcatcgaaggtgacgacct 20444301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37846002 - 37846075
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg-ttgatgcatcgaaggtgacgacct 73  Q
    ||||||| ||||||||||||| || |||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  37846002 ttacttcagagattatgtaaggcgggtgtgaacccttacatacgatgtgtttgattcatcgaaggtgacgacct 37846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5769750 - 5769845
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  5769750 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 5769845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22144928 - 22145023
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  22144928 ttacttcggtgataatgtaagacgagtgtgaaattttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 22145023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22226616 - 22226509
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||||||||||||||||| || | |||||  |||||||||||||||||    ||||| ||||||||||||   || ||||  |||||||||| |||     
T  22226616 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgtgttttatcatcggaggtgacgaccttttggagatttggtaccacatgcattt 22226517  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  22226516 atgtgtca 22226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 20956848 - 20956886
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20956848 tttattcatgtttaactgttatgtggattatgatgatgt 20956886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 22837222 - 22837260
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22837222 tttattcatgtttaactgttatgtggattatgatgatgt 22837260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 22837425 - 22837463
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22837425 tttattcatgtttaactgttatgtggattatgatgatgt 22837463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20530139 - 20530075
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg-ttgatgcatcgaagg 64  Q
    ||||||||||||||||||||| || |||||||  |||||||| |||||| ||||| |||||||||    
T  20530139 ttacttcggagattatgtaaggcgggtgtgaacccttacataagatgtgtttgattcatcgaagg 20530075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20821584 - 20821501
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgatt 83  Q
    ||||||||| ||| |||||||||| | ||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||    
T  20821584 ttacttcggcgataatgtaagacgggcgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatt 20821501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 27673145 - 27673107
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  27673145 tttattcatgtttaactgtcatgtggattatgatgatgt 27673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 51658219 - 51658255
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  51658219 ttattcatgt-taactgttatgtggattatgatgatgt 51658255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20930109 - 20929999
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    |||||| |||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  20930109 ttactttggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttacatcggaggtgacgaccttttggagatttggtaccacatgca 20930010  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  20930009 tttatgtgtca 20929999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 8186 - 8360
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| | || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  8186 ttacttcggagattatctaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 8285  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtg 174  Q
     ||| |||||| |||||||||||||||||||||| ||||||||  |||| | |||||| |||||||||| |||||    
T  8286 tatgcgtcatgattagggacatatcattgttgcatgagtcctaactgtggagtaattgccatacttgtgattgtg 8360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 13575 - 13749
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| | || | |||||||||||||||||||| |||||||||| |||||||||| |||    
T  13575 ttacttcggagattatctaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgattcggtaccacatgcatt 13674  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtg 174  Q
     ||| |||||| |||||||||||||||||||||| ||||||||  |||| | |||||| |||||||||| |||||    
T  13675 tatgcgtcatgattagggacatatcattgttgcatgagtcctaactgtggagtaattgccatacttgtgattgtg 13749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17937 - 17827
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaag--gtgacgacctggaggtgattcagtaccacatgta 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||  |||||||||| |||||||||  |||||| ||| |    
T  17937 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggcgtgacgaccttgaggtgatttggtaccaaatgca 17838  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  17837 ttaatgtgtca 17827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20021 - 19911
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaag--gtgacgacctggaggtgattcagtaccacatgta 97  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||  |||||||||| |||||||||  |||||| ||| |    
T  20021 ttacttcggagattatgtaagacgggtgtgaactcttacatacgatgtttttgttgcatcgaaggcgtgacgaccttgaggtgatttggtaccaaatgca 19922  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  19921 ttaatgtgtca 19911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 71815 - 71991
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| | ||| ||||||||| |||||||||| |||||||||  |||||||| | |||    
T  71815 ttacttcggagattatgtaagacggttgtgaaatcttacatacgatgtttttgttgcatcgaatgtgacgaccttgaggtgatttggtaccacaggcatt 71914  T
Q  100 catgtgtcatgcttagggacatatca-ttgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtga 175  Q
     ||| |||||  |||||||||||||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||    
T  71915 tatgcgtcataattagggacatatcatttgttgcatgagtcctaattgtgaaatgattgacatacttgtggttgtga 71991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2158 - 2332
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | || |||||||||||||| || |||||||| | |||||||||| |||    
T  2158 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgaatcgaaggtgacgatcttgaggtgatccggtaccacatgcatt 2257  T
Q  100 catgtgtcatgcttagggacatatcattgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtg 174  Q
     |||  ||||| |||||||||||||||||| ||| ||| ||||  |||| | |||||| |||||||||| |||||    
T  2258 tatgcatcatgattagggacatatcattgtggcatgagccctaattgtggagtaattgccatacttgtgattgtg 2332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 2475 - 2511
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2475 ttattcatgt-taactgttatgtggattatgatgatgt 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 60204 - 60096
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  60204 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 60105  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  60104 tatgtgtca 60096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4759 - 4651
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  4759 ttacttcggagattatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 4660  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  4659 tatgtgtca 4651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3289 - 3181
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||| ||     
T  3289 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatgcatg 3190  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  3189 tatgtgtca 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13726 - 13834
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||| ||     
T  13726 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatgcata 13825  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  13826 tatgtgtca 13834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12828 - 12720
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||||||||| |||    
T  12828 ttacttcggagattatgtaaggcgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatgcatt 12729  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  12728 tatgtgtca 12720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 1126 - 960
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcatt--gttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttgg 183  Q
    ||||| |||| ||| ||||||| || |||||||||||||||   |||||| |||||||| |||||||||||||||||||||||||| ||||| |  ||||    
T  1126 gtaccgcatgcatttatgtgtcgtgtttagggacatatcatatcgttgcatgagtcctaaatgtgaaataattgacatacttgtggatgtgagtgattgg 1027  T
Q  184 atgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtggaa 249  Q
     ||||||||||| ||| ||| ||||| | |||| |||||||||||||||||||  |||||| |||||    
T  1026 ttgtgatatttgaatttatcattatgaatcattattgagattaaatattcatgttaattatttggaa 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8062 - 7955
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  |||||||||| |||    
T  8062 ttacttcggagattatgtaagacggttgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatgcatt 7963  T
Q  100 catgtgtc 107  Q
     |||||||    
T  7962 tatgtgtc 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38092 - 37997
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | ||||||||||    
T  38092 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtaccacatg 37997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14308 - 14201
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| | ||| |||||||||| ||||||||| |||||||||  |||||||||| |||    
T  14308 ttacttcggagattatgtaagacgggtgtcaaatcttacatacgatgtttttgttgcatcgaagatgacgaccttgaggtgatttggtaccacatgcatt 14209  T
Q  100 catgtgtc 107  Q
     |||||||    
T  14208 tatgtgtc 14201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3831 - 3926
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  3831 ttacttcggagattatataagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 3926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6176 - 6081
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  6176 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 6081  T

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Target: scaffold0120 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27204 - 27097
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||| | |||| ||||| |||    
T  27204 ttacttcggagattatgtaagatgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatccggtactacatgcatt 27105  T
Q  100 catgtgtc 107  Q
     |||||||    
T  27104 tatgtgtc 27097  T

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Target: scaffold0021 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 138342 - 138437
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  138342 ttacttcggagattatgtaagacgggtgtgaaatattacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatttggtaccacatg 138437  T

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Target: scaffold0447 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3255 - 3160
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| | ||| ||||||||||||||||| || |||||||||  ||||||||||    
T  3255 ttacttcggagattatgtaagacgggtgtgaaattttacatacgatgtttttgttgcatcgaaggtgacgagcttgaggtgatttggtaccacatg 3160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5863 - 5768
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| | ||| ||||||||||||||||| || |||||||||  ||||||||||    
T  5863 ttacttcggagattatgtaagacgggtgtgaaattttacatacgatgtttttgttgcatcgaaggtgacgagcttgaggtgatttggtaccacatg 5768  T

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Target: scaffold0031 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 68957 - 68862
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||   ||||||||||    
T  68957 ttacttgggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgcatcgaaggtgacgaccttgaggtgatatggtaccacatg 68862  T

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Target: scaffold1068 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 1786 - 1695
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtga 175  Q
    |||||||||| ||| |||| ||||| |||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  1786 gtaccacatgcatttatgtctcatgtttagggacatatcatattgttgcatgagtcctaaatgtgaaataattgacatacttgtggatgtga 1695  T

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Target: scaffold0190 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8708 - 8613
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||| || |||| |||||||| ||| |||||||||  ||||||||||    
T  8708 ttacttcggagattatgtaagacgggtgtgaaatcttacatacgatgtttttgttgaatcggaggtgacggccttgaggtgatttggtaccacatg 8613  T

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Target: scaffold0193 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 3386 - 3292
Alignment:
Q  2 tacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    |||||||| |||||||||||||| | |||||||||||||||| ||| | ||| |||||||||||||||||||| |||||||||  ||||||||||    
T  3386 tacttcggtgattatgtaagacgggcgtgaaatcttacatacaatgtttttgttgcatcgaaggtgacgacctagaggtgatttggtaccacatg 3292  T

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Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 104487 - 104376
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaataattgacatacttgtggttgtgaatatttgg 183  Q
    ||||| |||| ||| ||||||| ||  ||||||||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||||||| |  ||||    
T  104487 gtaccgcatgcatttatgtgtcgtgtctagggacatatcatattgtggcatgagtcctaaatgtgaaataattgacatacttgtggttgtgagtgattgg 104388  T
Q  184 atgtgatatttg 195  Q
     |||||||||||    
T  104387 ttgtgatatttg 104376  T

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Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25148 - 25243
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||  | ||| |||||  ||||||||||||| |||||||||  ||||||||||    
T  25148 ttacttcggtgattatgtaagacgggtgtgaaatcttacatacgatatttttgttgcatttaaggtgacgaccttgaggtgattttgtaccacatg 25243  T

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Target: scaffold0051 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 56569 - 56461
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||| |||||||||||||||| || |||| |||||||||||||| | ||| ||||||||| ||||||||||   |||||||  |||||||||| |||    
T  56569 ttacttcagagattatgtaagacgggtttgaattcttacatacgatgtttttgttgcatcgaatgtgacgaccttttggtgatttggtaccacatgcatt 56470  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  56469 tatgtgtca 56461  T

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Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 236811 - 236703
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||||||||||||||||   |||||||||||||||||||||| |   |  ||||||||||||||||||| ||||||||   |||||||||| |||    
T  236811 ttacttcggagattatgtaagaaaggtgtgaaatcttacatacgatgttaaagtagcatcgaaggtgacgacctagaggtgataaggtaccacatgcatt 236712  T
Q  100 catgtgtca 108  Q
     ||||||||    
T  236711 tatgtgtca 236703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11556 - 11663
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||    ||||||||||||||||||   || ||||  |||||||||| |||     
T  11556 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgttttatcatcgaaggtgacgaccttttggagatttggtaccacatgcattt 11655  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  11656 atgtgtca 11663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 36372 - 36267
Alignment:
Q  149 aaataattgacatacttgtggttgtgaatatttggatgtgatattt-gattcatcgttatgtaacattgttgagattaaatattcatgccaattatgtgg 247  Q
    |||||||||| |||||||||| ||||| || |||| |||||||||| |||| ||| ||||| |  ||| |||||||||||||||||||  |||||| |||    
T  36372 aaataattgatatacttgtggatgtgagtaattggttgtgatatttggatttatcattatgaattattattgagattaaatattcatgttaattatttgg 36273  T
Q  248 aacttg 253  Q
    ||||||    
T  36272 aacttg 36267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 70929 - 71002
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||||   |||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  70929 ttacttcggagattatgtaagataggtgtgaaatcttccatacgatgtttttgttgcatcgaaggtgacgacct 71002  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 249071 - 249182
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggt---gacgacctggaggtgattcagtaccacatgt 96  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||| | ||| ||||||||||||   |||||||| ||||||||   ||||||||||     
T  249071 ttacttaggagattatgtaagacgggtgtgaactcttacataagatgtttttgttgcatcgaaggtgacgacgaccttgaggtgatctggtaccacatgc 249170  T
Q  97 attcatgtgtca 108  Q
    ||| ||||||||    
T  249171 atttatgtgtca 249182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 319 - 224
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  319 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5374 - 5279
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  5374 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 5279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 45 - 8
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| || ||||||||||||||||||||||||    
T  45 ttattcatgtttatctgttatgtggattatgatgatgt 8  T

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Target: scaffold0786; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 5100 - 5063
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| || ||||||||||||||||||||||||    
T  5100 ttattcatgtttatctgttatgtggattatgatgatgt 5063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 85050 - 84955
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||||||  ||||||||||    
T  85050 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgaccttgaggtgatttggtaccacatg 84955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 197626 - 197733
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||| ||||||||||||| || |||||||  |||||||||||||| ||    ||||||||||||||||||   || ||||  ||||||||||||||     
T  197626 ttacttcagagattatgtaaggcgggtgtgaacccttacatacgatgtcttttatcatcgaaggtgacgaccttttggagatttggtaccacatgtattt 197725  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  197726 atgtgtca 197733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26188 - 26062
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatg-tgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtatt 99  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||| | ||| ||||||   |||||||||||  ||||||||  |||||||||| ||     
T  26188 ttacttcggtgataatgtaagacgtgtgtgaaatcttacatatgatgtttttgttgcatcatgggtgacgacctttaggtgatttggtaccacatgcata 26089  T
Q  100 catgtgtcatgcttagggacatatcat 126  Q
     ||||||| || |||||  ||||||||    
T  26088 tatgtgtcgtgattaggcgcatatcat 26062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 100 - 29
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtg--ttgatgcatcgaaggtgacga 70  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||  ||| | |||||||||||||||    
T  100 ttacttcggagattatgtaaggcgggtgtgaacccttacatacgatgtgatttgttccatcgaaggtgacga 29  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 3903 - 3812
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgtt-gatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||| ||| |||||||||| ||||||||||||||||| |||||||| | | ||||   ||||||||||| |||||||||  ||||||||||    
T  3903 ttcggtgataatgtaagacgggtgtgaaatcttacatatgatgtgtttgttacatcatgggtgacgaccttgaggtgatttggtaccacatg 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 3633 - 3596
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| || ||||||||||||||||||||||||    
T  3633 ttattcatgtttatctgttatgtggattatgatgatgt 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 145169 - 145095
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt--gttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||  |||| | ||||||||||||||||||    
T  145169 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgtgagttgttccatcgaaggtgacgacct 145095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 147428 - 147354
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt--gttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||  |||| | |||||||||||| |||||    
T  147428 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgtgagttgttccatcgaaggtgatgacct 147354  T

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Target: scaffold0253 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 4105 - 4067
Alignment:
Q  295 tttattcatgtataactgttatgtggattatgatgatgt 333  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  4105 tttattcatgtttaactgttatgtggattatgatgatgt 4067  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2653 - 2763
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||||   |||| | ||||  ||||||||||||   || ||||  |||||||||| |    
T  2653 ttacttcggagattatgtaagacgggggtgaacccttacatacgatgttgagttgttccatcagaggtgacgaccttttggagatttggtaccacatgca 2752  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  2753 tttatgtgtca 2763  T

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Target: scaffold0483 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4272 - 4382
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  4272 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 4371  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  4372 tttatgtgtca 4382  T

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Target: scaffold0269 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 717 - 607
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  717 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 618  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  617 tttatgtgtca 607  T

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Target: scaffold0269; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 3091 - 3055
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3091 ttattcatgt-taactgttatgtggattatgatgatgt 3055  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32714 - 32824
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  32714 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 32813  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  32814 tttatgtgtca 32824  T

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Target: scaffold0109 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 49112 - 49222
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  49112 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 49211  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  49212 tttatgtgtca 49222  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 40130 - 40020
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  40130 ttacttcggagattatgtaaggcgggggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 40031  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  40030 tttatgtgtca 40020  T

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Target: scaffold0073 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 56020 - 55925
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgat-gtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatg 95  Q
    ||||||||| ||| |||||||||| ||||||||||||||||| |||  | ||| ||||||   ||||||||||| |||| ||||  ||||||||||    
T  56020 ttacttcggtgataatgtaagacgggtgtgaaatcttacatatgatatttttgttgcatcatgggtgacgaccttgaggggattttgtaccacatg 55925  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 54276 - 54169
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgtattc 100  Q
    ||||||| |||||||||||||  | |||||||  |||||||||||||||||    ||||||| ||||||||||   || ||||  |||||||||| |||     
T  54276 ttacttcagagattatgtaagctgggtgtgaacccttacatacgatgtgttttatcatcgaaagtgacgaccttttggagatttggtaccacatgcattt 54177  T
Q  101 atgtgtca 108  Q
    ||||||||    
T  54176 atgtgtca 54169  T

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Target: scaffold0032; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 109604 - 109651
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt 48  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||||    
T  109604 ttacttcggagattatgtaagacgggggtgaacccttacatacgatgt 109651  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 20659 - 20506
Alignment:
Q  86 gtaccacatgtattcatgtgtcatgcttagggacatatcat--tgttgcacgagtcctatatgtgaaa-taattgacatacttgtggttgtgaatatttg 182  Q
    ||||| |||| ||| ||||||| ||  ||||| ||||||||  ||| ||| ||||||||  ||||||| ||||||| ||||||||| |||||| |  |||    
T  20659 gtaccgcatgcatttatgtgtcgtgtataggggcatatcatattgtggcatgagtcctaattgtgaaaataattgatatacttgtgattgtgagtgattg 20560  T
Q  183 gatgtgatatttga-ttcatcgttatgtaacattgttgagattaaatattcatg 235  Q
    | ||||||| |||| || ||| ||||| |  ||| |||||||||||||||||||    
T  20559 gttgtgatacttgaatttatcattatgaattattattgagattaaatattcatg 20506  T

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Target: scaffold0561 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 4464 - 4569
Alignment:
Q  149 aaataattgacatacttgtggttgtgaatatttggatgtgatatttg-attcatcgttatgtaacattgttgagattaaatattcatgccaattatgtgg 247  Q
    |||||||||| |||||||||| ||||| |  |||  |||||||| || ||| ||| ||||| |  ||| |||||||||||||||||||  |||||| |||    
T  4464 aaataattgatatacttgtggatgtgagtgattgattgtgatatctggatttatcattatgaattattattgagattaaatattcatgttaattatttgg 4563  T
Q  248 aacttg 253  Q
    ||||||    
T  4564 aacttg 4569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 7335 - 7299
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  7335 ttattcatgt-taactgttatgtggattatgatgatgt 7299  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 30686 - 30650
Alignment:
Q  296 ttattcatgtataactgttatgtggattatgatgatgt 333  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30686 ttattcatgt-taactgttatgtggattatgatgatgt 30650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 189 - 121
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||| || | |||||  |||||||||||||||||    ||||| ||||||||||||    
T  189 ttcggagattatgtaaggcgggggtgaacccttacatacgatgtgttttatcatcggaggtgacgacct 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28453 - 28385
Alignment:
Q  5 ttcggagattatgtaagacgagtgtgaaatcttacatacgatgtgttgatgcatcgaaggtgacgacct 73  Q
    ||||||||||||||||| || | |||||  |||||||||||||||||    ||||| ||||||||||||    
T  28453 ttcggagattatgtaaggcgggggtgaacccttacatacgatgtgttttatcatcggaggtgacgacct 28385  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 217272 - 217381
Alignment:
Q  1 ttacttcggagattatgtaagacgagtgtgaaatcttacatacgatgt---gttgatgcatcgaaggtgacgacctggaggtgattcagtaccacatgta 97  Q
    ||||||||||||||||||||| || | |||||  ||||||||||||||   |||| | ||||| ||||||||||||   || ||||  |||||||||| |    
T  217272 ttacttcggagattatgtaaggcg-gggtgaacccttacatacgatgttgagttgttccatcggaggtgacgaccttttggagatttggtaccacatgca 217370  T
Q  98 ttcatgtgtca 108  Q
    || ||||||||    
T  217371 tttatgtgtca 217381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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