View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18187_low_9 (Length: 350)

Name: NF18187_low_9
Description: NF18187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18187_low_9
NF18187_low_9
[»] chr1 (44 HSPs)
chr1 (89-239)||(48415977-48416127)
chr1 (240-349)||(33706517-33706627)
chr1 (17-91)||(48416150-48416224)
chr1 (240-320)||(31032052-31032133)
chr1 (242-350)||(35956263-35956371)
chr1 (240-350)||(7154808-7154919)
chr1 (242-350)||(14535353-14535462)
chr1 (240-350)||(36732432-36732543)
chr1 (240-303)||(44510431-44510494)
chr1 (242-350)||(7557470-7557578)
chr1 (240-350)||(30837762-30837870)
chr1 (240-350)||(33004463-33004574)
chr1 (240-350)||(21097339-21097449)
chr1 (242-350)||(12769582-12769691)
chr1 (240-334)||(52407355-52407448)
chr1 (261-319)||(10772562-10772621)
chr1 (253-319)||(30838840-30838907)
chr1 (253-319)||(33704416-33704483)
chr1 (253-319)||(36307665-36307732)
chr1 (241-334)||(5328829-5328922)
chr1 (241-334)||(29647541-29647634)
chr1 (241-320)||(30301000-30301077)
chr1 (240-310)||(46464547-46464616)
chr1 (278-350)||(25657741-25657814)
chr1 (247-334)||(29522032-29522119)
chr1 (253-319)||(24780881-24780948)
chr1 (261-317)||(31029913-31029970)
chr1 (240-320)||(35954145-35954225)
chr1 (252-319)||(44512521-44512589)
chr1 (253-319)||(7556108-7556174)
chr1 (248-318)||(23264131-23264201)
chr1 (261-319)||(48127597-48127656)
chr1 (241-318)||(44299066-44299143)
chr1 (279-319)||(46118145-46118186)
chr1 (283-334)||(30303065-30303117)
chr1 (253-316)||(35954238-35954301)
chr1 (279-334)||(52404509-52404565)
chr1 (240-318)||(11757143-11757221)
chr1 (253-319)||(21096654-21096720)
chr1 (253-319)||(25655678-25655744)
chr1 (279-320)||(9132893-9132935)
chr1 (234-307)||(44110216-44110288)
chr1 (252-319)||(7152728-7152795)
chr1 (279-334)||(33006505-33006561)
[»] chr7 (55 HSPs)
chr7 (240-350)||(16273908-16274019)
chr7 (240-350)||(4861871-4861982)
chr7 (240-350)||(41338241-41338352)
chr7 (241-350)||(44456896-44457006)
chr7 (240-350)||(38179659-38179770)
chr7 (242-350)||(40013623-40013732)
chr7 (240-350)||(723484-723595)
chr7 (242-350)||(3412676-3412785)
chr7 (240-350)||(20122285-20122396)
chr7 (240-350)||(48950231-48950342)
chr7 (242-350)||(9659011-9659119)
chr7 (242-350)||(41856272-41856381)
chr7 (242-350)||(46553435-46553544)
chr7 (240-350)||(21817320-21817429)
chr7 (240-350)||(23592538-23592648)
chr7 (239-350)||(4657017-4657123)
chr7 (242-350)||(47505638-47505746)
chr7 (240-350)||(41287553-41287663)
chr7 (242-316)||(47906947-47907022)
chr7 (240-350)||(48684537-48684647)
chr7 (236-350)||(17286321-17286435)
chr7 (240-303)||(33244607-33244670)
chr7 (250-350)||(44884722-44884819)
chr7 (252-350)||(21737404-21737502)
chr7 (253-319)||(20119885-20119952)
chr7 (253-334)||(725610-725692)
chr7 (279-350)||(48605725-48605797)
chr7 (261-319)||(16277665-16277724)
chr7 (240-307)||(19063904-19063971)
chr7 (253-319)||(44459395-44459462)
chr7 (253-316)||(4859584-4859648)
chr7 (240-334)||(8391439-8391533)
chr7 (252-334)||(9663676-9663758)
chr7 (253-319)||(41336130-41336197)
chr7 (252-319)||(33246741-33246808)
chr7 (253-316)||(41858648-41858712)
chr7 (266-316)||(40015779-40015830)
chr7 (240-318)||(41405938-41406016)
chr7 (253-319)||(46555583-46555650)
chr7 (278-350)||(241518-241595)
chr7 (279-319)||(18995069-18995110)
chr7 (241-350)||(19233739-19233850)
chr7 (247-319)||(44882577-44882649)
chr7 (279-319)||(47909437-47909478)
chr7 (279-319)||(3416237-3416277)
chr7 (242-334)||(28588193-28588278)
chr7 (240-318)||(586160-586238)
chr7 (240-307)||(33982605-33982671)
chr7 (248-318)||(37624145-37624215)
chr7 (252-318)||(38229767-38229833)
chr7 (283-350)||(46936270-46936340)
chr7 (240-307)||(47251966-47252032)
chr7 (261-318)||(17968401-17968458)
chr7 (279-319)||(21815248-21815289)
chr7 (279-319)||(30760154-30760195)
[»] chr8 (66 HSPs)
chr8 (242-350)||(4621484-4621593)
chr8 (240-350)||(23345171-23345282)
chr8 (240-350)||(26965364-26965475)
chr8 (238-350)||(278690-278803)
chr8 (238-350)||(637049-637162)
chr8 (238-350)||(822852-822965)
chr8 (240-350)||(3703168-3703279)
chr8 (240-348)||(16097573-16097682)
chr8 (239-350)||(17946582-17946694)
chr8 (240-350)||(38059243-38059354)
chr8 (240-350)||(41182400-41182511)
chr8 (242-350)||(6096790-6096898)
chr8 (239-350)||(39859906-39860017)
chr8 (240-350)||(2081366-2081477)
chr8 (240-346)||(18957367-18957474)
chr8 (242-350)||(30475974-30476083)
chr8 (242-350)||(38576588-38576696)
chr8 (242-350)||(15881233-15881342)
chr8 (240-334)||(40618470-40618564)
chr8 (240-349)||(17852389-17852494)
chr8 (242-350)||(45407245-45407353)
chr8 (240-350)||(40302414-40302524)
chr8 (240-350)||(30112138-30112249)
chr8 (236-350)||(3851984-3852098)
chr8 (236-350)||(42647263-42647377)
chr8 (253-319)||(25583745-25583812)
chr8 (253-319)||(27911894-27911961)
chr8 (253-319)||(27958313-27958380)
chr8 (253-334)||(17853400-17853482)
chr8 (245-350)||(28084755-28084860)
chr8 (242-350)||(38099221-38099331)
chr8 (278-350)||(41181669-41181741)
chr8 (252-319)||(4622883-4622951)
chr8 (242-348)||(41546810-41546915)
chr8 (252-316)||(276589-276654)
chr8 (252-316)||(639195-639260)
chr8 (252-316)||(825001-825066)
chr8 (248-316)||(44255961-44256030)
chr8 (252-319)||(17948637-17948705)
chr8 (240-307)||(35019235-35019301)
chr8 (261-319)||(38060905-38060964)
chr8 (237-318)||(15825064-15825145)
chr8 (261-334)||(39857878-39857952)
chr8 (278-350)||(36193374-36193447)
chr8 (279-350)||(13139358-13139430)
chr8 (287-350)||(30554749-30554813)
chr8 (279-334)||(44258030-44258086)
chr8 (240-318)||(39070298-39070376)
chr8 (248-318)||(41671476-41671546)
chr8 (261-319)||(45409283-45409341)
chr8 (261-317)||(15883558-15883615)
chr8 (267-319)||(18955120-18955173)
chr8 (279-319)||(40304541-40304582)
chr8 (253-319)||(38577185-38577251)
chr8 (278-350)||(42737484-42737558)
chr8 (279-319)||(3705264-3705305)
chr8 (279-319)||(13141437-13141478)
chr8 (279-319)||(16095805-16095846)
chr8 (266-334)||(18089490-18089558)
chr8 (279-319)||(30556819-30556860)
chr8 (253-333)||(41544849-41544929)
chr8 (268-319)||(2082413-2082465)
chr8 (261-316)||(3846520-3846575)
chr8 (241-316)||(5588103-5588179)
chr8 (247-318)||(15825910-15825981)
chr8 (296-350)||(18087552-18087608)
[»] chr3 (82 HSPs)
chr3 (242-350)||(4230848-4230957)
chr3 (240-350)||(23021975-23022086)
chr3 (240-346)||(27330113-27330220)
chr3 (240-350)||(53583654-53583765)
chr3 (240-349)||(41695914-41696024)
chr3 (242-350)||(44841226-44841335)
chr3 (242-350)||(50546473-50546582)
chr3 (240-350)||(8849752-8849863)
chr3 (240-350)||(11123595-11123706)
chr3 (240-346)||(13243527-13243634)
chr3 (240-350)||(40908439-40908550)
chr3 (240-348)||(29894709-29894818)
chr3 (240-350)||(2219926-2220037)
chr3 (240-350)||(18763864-18763974)
chr3 (241-334)||(37218168-37218262)
chr3 (242-350)||(37787213-37787322)
chr3 (242-350)||(47910953-47911062)
chr3 (240-350)||(22606795-22606906)
chr3 (240-350)||(41103674-41103785)
chr3 (252-350)||(45172664-45172763)
chr3 (237-350)||(51720857-51720971)
chr3 (242-350)||(55219832-55219940)
chr3 (240-350)||(31311666-31311776)
chr3 (240-350)||(50610547-50610658)
chr3 (242-350)||(27128120-27128228)
chr3 (242-350)||(30438267-30438376)
chr3 (242-350)||(38698759-38698867)
chr3 (240-350)||(15082709-15082820)
chr3 (240-350)||(42827939-42828049)
chr3 (240-350)||(52745654-52745765)
chr3 (241-350)||(45051738-45051847)
chr3 (245-350)||(50535960-50536065)
chr3 (240-350)||(37178242-37178352)
chr3 (253-319)||(53845139-53845206)
chr3 (246-350)||(3890777-3890881)
chr3 (248-319)||(11121080-11121152)
chr3 (252-319)||(30043624-30043692)
chr3 (252-334)||(2217883-2217966)
chr3 (253-319)||(13213299-13213366)
chr3 (261-319)||(23019699-23019758)
chr3 (253-319)||(37785292-37785359)
chr3 (253-319)||(44843331-44843398)
chr3 (253-346)||(4233154-4233248)
chr3 (261-334)||(27320873-27320947)
chr3 (242-350)||(30361644-30361752)
chr3 (242-349)||(55413124-55413232)
chr3 (242-333)||(10825749-10825840)
chr3 (279-350)||(18412067-18412139)
chr3 (248-319)||(27239195-27239267)
chr3 (242-333)||(53776402-53776493)
chr3 (261-319)||(15084704-15084763)
chr3 (253-319)||(22604724-22604791)
chr3 (253-319)||(8852283-8852350)
chr3 (252-318)||(40906007-40906074)
chr3 (253-319)||(41101517-41101584)
chr3 (261-319)||(42825876-42825935)
chr3 (247-333)||(43338222-43338308)
chr3 (240-307)||(50935460-50935526)
chr3 (261-316)||(6177347-6177403)
chr3 (253-316)||(37220242-37220306)
chr3 (253-319)||(18410065-18410132)
chr3 (240-307)||(22981400-22981466)
chr3 (248-318)||(32001216-32001286)
chr3 (240-307)||(36465585-36465651)
chr3 (272-334)||(37523067-37523130)
chr3 (253-319)||(45169828-45169895)
chr3 (253-319)||(47913088-47913155)
chr3 (253-319)||(50548627-50548694)
chr3 (279-319)||(30440419-30440460)
chr3 (279-319)||(38235378-38235419)
chr3 (242-318)||(54410687-54410763)
chr3 (248-318)||(22977835-22977905)
chr3 (261-334)||(27126060-27126134)
chr3 (278-350)||(40424790-40424864)
chr3 (279-319)||(16463788-16463829)
chr3 (241-316)||(22731373-22731449)
chr3 (279-318)||(29864519-29864559)
chr3 (283-334)||(40423540-40423592)
chr3 (261-316)||(41698227-41698283)
chr3 (247-318)||(50938508-50938579)
chr3 (283-334)||(53778426-53778478)
chr3 (247-318)||(54409366-54409437)
[»] chr6 (24 HSPs)
chr6 (240-350)||(16922207-16922318)
chr6 (235-350)||(27784384-27784500)
chr6 (240-350)||(14105897-14106008)
chr6 (240-346)||(17557572-17557679)
chr6 (240-350)||(23582172-23582283)
chr6 (240-350)||(4587861-4587972)
chr6 (242-350)||(953654-953763)
chr6 (243-344)||(28580924-28581025)
chr6 (241-350)||(5686338-5686447)
chr6 (253-319)||(11837779-11837846)
chr6 (253-319)||(23580091-23580158)
chr6 (253-319)||(27782272-27782339)
chr6 (253-334)||(14103797-14103879)
chr6 (253-334)||(24083004-24083085)
chr6 (253-319)||(4590003-4590070)
chr6 (253-319)||(11154815-11154882)
chr6 (253-319)||(17551009-17551076)
chr6 (253-319)||(27438218-27438285)
chr6 (286-334)||(15287501-15287550)
chr6 (290-334)||(24084542-24084587)
chr6 (261-316)||(25109367-25109422)
chr6 (252-319)||(28578430-28578497)
chr6 (278-350)||(25120602-25120674)
chr6 (240-318)||(13866014-13866090)
[»] chr5 (44 HSPs)
chr5 (240-350)||(9593793-9593904)
chr5 (240-350)||(39590675-39590786)
chr5 (240-349)||(822818-822928)
chr5 (242-350)||(37938494-37938603)
chr5 (240-350)||(744072-744183)
chr5 (240-350)||(27018122-27018233)
chr5 (241-350)||(30128626-30128736)
chr5 (241-350)||(31547465-31547575)
chr5 (237-350)||(42609902-42610015)
chr5 (240-328)||(12501389-12501478)
chr5 (241-350)||(7179660-7179769)
chr5 (240-350)||(19666586-19666697)
chr5 (240-346)||(20544189-20544296)
chr5 (249-350)||(37272676-37272777)
chr5 (246-350)||(15527379-15527483)
chr5 (242-350)||(34402115-34402222)
chr5 (240-346)||(19505011-19505117)
chr5 (240-350)||(9985359-9985469)
chr5 (247-319)||(9591612-9591685)
chr5 (253-319)||(745729-745796)
chr5 (242-334)||(11986568-11986659)
chr5 (252-316)||(27020212-27020277)
chr5 (253-319)||(12499226-12499293)
chr5 (253-319)||(19664770-19664837)
chr5 (261-319)||(37940117-37940176)
chr5 (253-319)||(42612384-42612451)
chr5 (253-334)||(39588266-39588348)
chr5 (240-320)||(27552658-27552738)
chr5 (248-307)||(29390987-29391046)
chr5 (253-333)||(34401523-34401603)
chr5 (283-334)||(11078413-11078465)
chr5 (252-319)||(20546319-20546387)
chr5 (248-318)||(5099856-5099926)
chr5 (240-318)||(15527270-15527348)
chr5 (253-334)||(37270252-37270333)
chr5 (242-318)||(6720879-6720955)
chr5 (279-319)||(27550636-27550677)
chr5 (248-318)||(15524119-15524189)
chr5 (253-319)||(34663569-34663635)
chr5 (266-319)||(7181206-7181259)
chr5 (241-307)||(29388962-29389028)
chr5 (279-319)||(9987447-9987488)
chr5 (243-307)||(3033069-3033132)
chr5 (279-334)||(13305579-13305635)
[»] scaffold0115 (2 HSPs)
scaffold0115 (242-350)||(30646-30755)
scaffold0115 (253-319)||(20729-20796)
[»] chr4 (68 HSPs)
chr4 (242-350)||(30823697-30823806)
chr4 (240-350)||(23417198-23417309)
chr4 (240-350)||(54921339-54921450)
chr4 (239-348)||(41039571-41039681)
chr4 (242-350)||(8941192-8941301)
chr4 (240-350)||(20352026-20352137)
chr4 (240-350)||(46719653-46719763)
chr4 (242-350)||(13530035-13530143)
chr4 (240-344)||(52449305-52449410)
chr4 (240-350)||(3033856-3033967)
chr4 (240-350)||(43304810-43304920)
chr4 (269-350)||(9366912-9366994)
chr4 (242-350)||(16666624-16666732)
chr4 (242-350)||(47805597-47805705)
chr4 (242-350)||(49875683-49875792)
chr4 (240-307)||(7489267-7489334)
chr4 (244-350)||(23931593-23931699)
chr4 (240-350)||(34074926-34075036)
chr4 (242-303)||(4654979-4655040)
chr4 (242-350)||(28172149-28172257)
chr4 (240-350)||(17362999-17363110)
chr4 (252-350)||(27956538-27956636)
chr4 (252-319)||(4652798-4652866)
chr4 (252-319)||(41041593-41041661)
chr4 (283-350)||(55449481-55449549)
chr4 (253-319)||(7487074-7487141)
chr4 (242-350)||(35046180-35046287)
chr4 (242-334)||(17518858-17518950)
chr4 (279-350)||(20785168-20785240)
chr4 (243-346)||(31289460-31289563)
chr4 (263-350)||(42180180-42180267)
chr4 (253-319)||(23419457-23419524)
chr4 (253-334)||(20787177-20787258)
chr4 (252-319)||(49970374-49970442)
chr4 (252-334)||(13534700-13534782)
chr4 (253-319)||(20354226-20354292)
chr4 (253-319)||(31292752-31292818)
chr4 (253-319)||(34072866-34072932)
chr4 (240-318)||(47649399-47649477)
chr4 (252-307)||(52447211-52447266)
chr4 (240-281)||(7489375-7489416)
chr4 (236-316)||(19869703-19869783)
chr4 (286-333)||(13861905-13861953)
chr4 (253-316)||(17360974-17361038)
chr4 (240-318)||(7113852-7113930)
chr4 (248-318)||(38623610-38623680)
chr4 (240-316)||(43940379-43940456)
chr4 (243-307)||(24577923-24577986)
chr4 (239-318)||(26923811-26923890)
chr4 (247-307)||(31309420-31309479)
chr4 (240-307)||(10659169-10659234)
chr4 (240-307)||(10873314-10873379)
chr4 (240-318)||(14270096-14270173)
chr4 (253-319)||(16664495-16664561)
chr4 (253-319)||(23933706-23933772)
chr4 (248-318)||(48952784-48952854)
chr4 (253-319)||(49873561-49873627)
chr4 (249-318)||(19871232-19871300)
chr4 (253-334)||(35824336-35824417)
chr4 (253-318)||(50496282-50496347)
chr4 (254-318)||(7111062-7111126)
chr4 (279-319)||(8939267-8939308)
chr4 (244-316)||(31624675-31624747)
chr4 (247-318)||(8081198-8081269)
chr4 (253-316)||(17520084-17520147)
chr4 (247-318)||(26917639-26917710)
chr4 (247-307)||(47650797-47650856)
chr4 (251-318)||(50792697-50792764)
[»] scaffold0006 (1 HSPs)
scaffold0006 (240-350)||(56450-56561)
[»] chr2 (43 HSPs)
chr2 (240-350)||(38280259-38280370)
chr2 (242-350)||(25225349-25225458)
chr2 (242-350)||(39965180-39965289)
chr2 (240-350)||(28389954-28390063)
chr2 (242-350)||(2290386-2290495)
chr2 (241-350)||(15400883-15400992)
chr2 (242-349)||(75574-75682)
chr2 (240-350)||(1053134-1053244)
chr2 (243-350)||(3849795-3849903)
chr2 (240-303)||(3904919-3904982)
chr2 (240-303)||(14004023-14004086)
chr2 (240-350)||(39067041-39067151)
chr2 (240-334)||(7575603-7575696)
chr2 (252-334)||(3907023-3907106)
chr2 (240-307)||(21191855-21191922)
chr2 (279-350)||(15154472-15154544)
chr2 (239-350)||(42078858-42078967)
chr2 (242-350)||(4736713-4736820)
chr2 (252-316)||(14006186-14006251)
chr2 (244-334)||(3753008-3753097)
chr2 (253-319)||(38282396-38282463)
chr2 (253-334)||(77717-77799)
chr2 (285-350)||(25761195-25761261)
chr2 (253-334)||(27551716-27551797)
chr2 (278-350)||(39773299-39773368)
chr2 (253-334)||(4738382-4738463)
chr2 (242-318)||(24457845-24457921)
chr2 (242-318)||(38932509-38932585)
chr2 (279-334)||(6644575-6644631)
chr2 (253-319)||(37726053-37726118)
chr2 (253-319)||(15152384-15152450)
chr2 (261-319)||(25223330-25223388)
chr2 (253-319)||(28391936-28392002)
chr2 (240-318)||(36603003-36603081)
chr2 (248-318)||(39159852-39159922)
chr2 (248-318)||(39209272-39209342)
chr2 (261-334)||(2292461-2292534)
chr2 (253-307)||(3851822-3851875)
chr2 (266-316)||(15398834-15398883)
chr2 (289-350)||(27549725-27549787)
chr2 (279-319)||(42080882-42080923)
chr2 (279-318)||(3767890-3767930)
chr2 (248-319)||(14454632-14454703)
[»] scaffold0779 (1 HSPs)
scaffold0779 (240-346)||(110-217)
[»] scaffold0208 (2 HSPs)
scaffold0208 (240-350)||(3860-3970)
scaffold0208 (279-319)||(5874-5915)
[»] scaffold0003 (1 HSPs)
scaffold0003 (253-319)||(49077-49144)
[»] scaffold0259 (1 HSPs)
scaffold0259 (283-334)||(6130-6182)


Alignment Details
Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 48416127 - 48415977
Alignment:
Q  89 ttgcagggtcatctgcgtagaaaactttctaatctcatcatatccaatcacagaacactccatagtcatccttacgggagaaaagtattgacaatggcta 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48416127 ttgcagggtcatctgcgtagaaaactttctaatctcatcatatccaatcacagaacactccatagtcatccttacgggaaaaaagtattgacaatggcta 48416028  T
Q  189 atgacatatatggaaagaaagttcaccgtttatgttataattgttagtttg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48416027 atgacatatatggaaagaaagttcaccgtttatgttataattgttagtttg 48415977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 240 - 349
Target Start/End: Complemental strand, 33706627 - 33706517
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  33706627 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 33706528  T
Q  339 aaatgagtcaa 349  Q
    |||||||||||    
T  33706527 aaatgagtcaa 33706517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 48416224 - 48416150
Alignment:
Q  17 acaatgtcgggtgagtgtttgaatattcacatctttgtactttctactaacattggtagcgattattatgttttg 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48416224 acaatgtcgggtgagtgtttgaatattcacatatttgtactttctactaacattggtagcgattattatgttttg 48416150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 31032133 - 31032052
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacatt 320  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31032133 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacatt 31032052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 35956371 - 35956263
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    ||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||    
T  35956371 ttttttctatattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgccataa 35956273  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  35956272 atgagtcaat 35956263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 7154919 - 7154808
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||  ||| ||||||||  ||    
T  7154919 ggttttttttagattaccctctcttatttagagggtattttaccttatcatgatatcaaccaatcaaaatgtaatatacattgtcaatattaaatgtcat 7154820  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  7154819 aaatgagtcaat 7154808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 14535353 - 14535462
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||| |||||||||||||  ||||    
T  14535353 ttttttttagattagcctctcttatttagatggtattttatcctctcatgatatcaaccaattaaaatgtaatatacattgacaacattaaatgtcataa 14535452  T
Q  341 atgagtcaat 350  Q
    | ||||||||    
T  14535453 acgagtcaat 14535462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 36732543 - 36732432
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgt-aatatacattaacaacattaaatgcta 337  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||||||||| | |||||| |||||||||| |||||||||||||  |    
T  36732543 ggttttttctagattaccctcgcttatttagagggta-tttaccctttcatgatatcaaccaattaaaatgtaaatatacattgacaacattaaatgtca 36732445  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  36732444 taaatgagtcaat 36732432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 44510431 - 44510494
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat 303  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44510431 ggttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaat 44510494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 7557578 - 7557470
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    ||||||||||||||| || |||| | |||||||||||| |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||  ||||    
T  7557578 ttttttctagattactctctcttgtctagagggtattt-accctctcatgatatcaaccaatcaaaatttaatatatattgacaacattaaatgtcataa 7557480  T
Q  341 atgagtcaat 350  Q
    |||| |||||    
T  7557479 atgattcaat 7557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 30837762 - 30837870
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||   | ||| | |||||||||||||| ||||| ||||||||||||||||  ||||||||||||  ||    
T  30837762 ggttttttctagattaccctctcttatttagagg---tattatcatctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtcat 30837858  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  30837859 aaatgagtcaat 30837870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 33004463 - 33004574
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg-cta 337  Q
    ||||||||||| ||||| || |||| ||||| |||||||| |||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| | |    
T  33004463 ggttttttctaaattactctctcttgtttagggggtattt-accctctcataatatcaactaatcaaaatgtaatatacattgacaacattaaatgtcaa 33004561  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  33004562 taaatgagtcaat 33004574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 21097449 - 21097339
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| ||||||||| | ||||||| ||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||    
T  21097449 ggttttttttagattaccctatcttatttataaggtattt-accttctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcat 21097351  T
Q  339 aaatgagtcaat 350  Q
    |||||| |||||    
T  21097350 aaatgaatcaat 21097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 12769691 - 12769582
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg-ctata 339  Q
    |||||||||||||||||| |||| ||||| || | ||| ||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| | |||    
T  12769691 ttttttctagattaccctctcttgtttaggggatcttt-accttctcatgatatcacccaatcaaaatgtaatatacattgacaacattaaatgtcaata 12769593  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  12769592 aatgagtcaat 12769582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 52407448 - 52407355
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    |||||||| ||||||||||| ||||  |||| |||||||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  52407448 ggttttttatagattaccctctcttggttag-gggtattt-accccctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatg 52407355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 10772562 - 10772621
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10772562 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 10772621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 30838907 - 30838840
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  30838907 ttaccctctcttatttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtactatacat 30838840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 33704416 - 33704483
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  33704416 ttaccctctcttgtttagagggtaatttaccctctcatgttatcaaccaatcaaaatgtaatatacat 33704483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 36307665 - 36307732
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  36307665 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaatcaaaatgtaatatacat 36307732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 5328922 - 5328829
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    ||||||| ||||||||||| |||| ||||| ||| ||||  |||| |||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  5328922 gttttttttagattaccctctcttgtttagggggcatttacccct-tcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatg 5328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 29647541 - 29647634
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| ||||||||||| | |||||||||||  |||| ||| |||||||||||||||||||| |||| ||||||||||| ||||| |||||||    
T  29647541 gttttttttagattaccctctgttatttagaggacattt-accgtctcatgatatcaaccaatcaaaatataatatacattgacaacgttaaatg 29647634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 30301000 - 30301077
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacatt 320  Q
    ||||||||||||||||||| |||||||||||||||||||  |||   ||| ||||||||||||| ||||||||||||||||    
T  30301000 gttttttctagattaccctctcttatttagagggtatttacccc---catcatatcaaccaatcaaaatgtaatatacatt 30301077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 46464616 - 46464547
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaatgt 310  Q
    |||||||||||||||||||| |||| ||||| |||| ||| | ||||||||||||||||||||||||||||    
T  46464616 ggttttttctagattaccctctcttgtttagggggtgttt-atcctctcatgatatcaaccaatcaaatgt 46464547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 25657814 - 25657741
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  25657814 tttacccttttatgatattaaccaatcaaaatgtaatatacattgacaacattaaatgacataaatgagtcaat 25657741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 29522119 - 29522032
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||| ||||||| |||| ||||||||||| || ||||| |||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  29522119 tctaggttaccctctcttgtttagagggtaatt-accctgtcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 29522032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 24780881 - 24780948
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||    
T  24780881 ttaccctatcttgtttagagggtaatttaccgtctcatgatatcaatcaatcgaaatgtaatatacat 24780948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 31029913 - 31029970
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatac 317  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  31029913 tcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatac 31029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 35954145 - 35954225
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacatt 320  Q
    |||||||| || ||||| || | || ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  35954145 ggttttttttaaattactctcttttgtttagagagtattt-accctctcatgatatcaaccaatcaaaatgtaatatacatt 35954225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 44512589 - 44512521
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||| || |||| |||||||| || ||||| ||||||||||||||||||||| |||||||||||||||    
T  44512589 attactctctcttgtttagaggttaatttactctctcatgatatcaaccaatcaaaatgtaatatacat 44512521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 7556108 - 7556174
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||| ||||| |||||||||||||||    
T  7556108 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaatcaatcaaaatgtaatatacat 7556174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 23264201 - 23264131
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  23264201 ctagattaccctatcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 23264131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 48127597 - 48127656
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| |||||||| || |||||||||| |||||||||||||||| |||||||||||||||    
T  48127597 tcttgtttagaggataatttaccctcttatgatatcaaccaatcaaaatgtaatatacat 48127656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 44299066 - 44299143
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||  ||| |||| ||||||||| ||||||||||||||    
T  44299066 gttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaaatgtaatataca 44299143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 46118145 - 46118186
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  46118145 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 46118186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 30303117 - 30303065
Alignment:
Q  283 cctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||    
T  30303117 cctctcatgatatcaaccaatcaaaatgtaatatacataggcaacattaaatg 30303065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 35954238 - 35954301
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||| ||||||||||| || ||||| |||||||||||||||||| ||||||||||||    
T  35954238 ttaccctctcttgtttagagggtaatt-accctatcatgatatcaaccaatcgaaatgtaatata 35954301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 52404509 - 52404565
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||||||||||| |||| ||||||| ||  |||||||||||||    
T  52404509 ttaccctctcatgatatcaaccaatcaaaatataatatatatagacaacattaaatg 52404565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 11757221 - 11757143
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| ||||| || ||||||||||| |||| ||||| |  ||| |||||||||||||| ||||||||||||||    
T  11757221 ggttttttctacattacactttcttatttagaaggta-tttacaccttcaagatatcaaccaatcaaaatgtaatataca 11757143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 21096654 - 21096720
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||||||||  | || ||||||||||||||||||||| |||||||||||||||    
T  21096654 ttaccctctcttgtttagagggtaaat-actctctcatgatatcaaccaatcaaaatgtaatatacat 21096720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 25655678 - 25655744
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || ||||| |||||||||||| ||||| |||||||||||||||    
T  25655678 ttaccctttcttgtttagagggtaatt-accctttcatgatatcaatcaatcaaaatgtaatatacat 25655744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 9132893 - 9132935
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacatt 320  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  9132893 ttaccctctcatgatattaaccaatcaaaatgtaatatacatt 9132935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 44110288 - 44110216
Alignment:
Q  234 agtttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||| ||||||||||| |||||||| | ||||||||||| |||||  |||| ||| || ||||||||||||||    
T  44110288 agttttggttttttctacattaccctattttatttagaggatatttatccct-tcaagacatcaaccaatcaaa 44110216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 7152728 - 7152795
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacat 319  Q
    |||||||| |||| |||||||| || |||||||||| ||||||||||| || | |||||||||||||||    
T  7152728 attaccctctcttgtttagagg-taatttaccctcttatgatatcaactaattaaaatgtaatatacat 7152795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 33006561 - 33006505
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaat-gtaatatacattaacaacattaaatg 334  Q
    |||||||||| ||||||| ||||||||||  |||||||||||  |||||||||||||    
T  33006561 ttaccctctcgtgatatctaccaatcaaaaagtaatatacatagacaacattaaatg 33006505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 16273908 - 16274019
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  16273908 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 16274007  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  16274008 aaatgagtcaat 16274019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 4861982 - 4861871
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  4861982 ggttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 4861883  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  4861882 aaatgagtcaat 4861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 41338352 - 41338241
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||    
T  41338352 ggttttttctagattaccctctcttatttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaatatacattagcaacattaaatgtcat 41338253  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  41338252 aaatgagtcaat 41338241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 44456896 - 44457006
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  |||    
T  44456896 gttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcata 44456995  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  44456996 aatgagtcaat 44457006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 38179659 - 38179770
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||  ||    
T  38179659 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaacgtaatatacattgacaacattaaatgtcat 38179758  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  38179759 aaatgagtcaat 38179770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 40013623 - 40013732
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||  ||||    
T  40013623 ttttttctagattaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataa 40013722  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  40013723 atgagtcaat 40013732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 723484 - 723595
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat-caaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||  ||    
T  723484 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaacgtaatatacattgacaacattaaatgtcat 723583  T
Q  339 aaatgagtcaat 350  Q
    |||||| |||||    
T  723584 aaatgattcaat 723595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 3412676 - 3412785
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||  ||||||||||||  ||||    
T  3412676 ttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatataatatacattggcaacattaaatgtcataa 3412775  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  3412776 atgagtcaat 3412785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 20122396 - 20122285
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||| |||| ||||||||  ||    
T  20122396 ggttttttctagattaccctctcttatttagagggtattttaccctctcattatatcaacctatcaaaatgtaatatgcattgacaatattaaatgtcat 20122297  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  20122296 aaatgagtcaat 20122285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 48950231 - 48950342
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||   ||    
T  48950231 ggttttttctagattaccctctcttatataaagggtattttaccctctcatgatattaaccaatcaaaatgtaatatacattgacaacattaaatatcat 48950330  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  48950331 aaatgagtcaat 48950342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 9659011 - 9659119
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||    
T  9659011 ttttttctagattaccctatcttgtttagagggtattt-accctctcatgatataaaccaatcaaaatgtaatatacattgacaacattaaatgtcataa 9659109  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  9659110 atgagtcaat 9659119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 41856272 - 41856381
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||   ||||    
T  41856272 ttttttctagattaccctcttttatatagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatatcataa 41856371  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  41856372 atgagtcaat 41856381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 46553435 - 46553544
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||||    
T  46553435 ttttttttagattatcctcttttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataa 46553534  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  46553535 atgagtcaat 46553544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 21817429 - 21817320
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  21817429 ggtttcttctatattaccctctcttatttagagggtattttacc--ctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 21817332  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  21817331 aaatgagtcaat 21817320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 23592538 - 23592648
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||| |||||||||||||||| |||||||||||||  ||    
T  23592538 ggttttttctagattaccctctcttatttagagggta-tttatcctttcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtcat 23592636  T
Q  339 aaatgagtcaat 350  Q
    ||| ||||||||    
T  23592637 aaacgagtcaat 23592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 4657017 - 4657123
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgcta 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||      ||||||||||||||||| |||||||||||||||| | |||||||||||  |    
T  4657017 gggttttttctagattaccctctcttatttagagggtatttta------catgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtca 4657110  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  4657111 taaatgagtcaat 4657123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 47505746 - 47505638
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||||||| |||||  |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||    
T  47505746 ttttttctagattaccctctcttgtttagaggatatttacccct-tcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataa 47505648  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  47505647 atgagtcaat 47505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 41287553 - 41287663
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||  ||    
T  41287553 ggttttttctagataaccctctcttgtttagagggta-tttaccctctcatgatatcaactaatcaaaatgtaatatatattgacaacattaaatgtcat 41287651  T
Q  339 aaatgagtcaat 350  Q
    ||||| ||||||    
T  41287652 aaatgggtcaat 41287663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 316
Target Start/End: Original strand, 47906947 - 47907022
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47906947 ttttttctagatttccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatata 47907022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 48684647 - 48684537
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||| || |||||||| | |||||||||||||||| ||||||||||||||||   |||||||||||  ||    
T  48684647 ggttttttctagattaccctctcttatttagaggata-tttacccttttatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtcat 48684549  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  48684548 aaatgagtcaat 48684537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 17286321 - 17286435
Alignment:
Q  236 tttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||| |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||     
T  17286321 tttggtttttttttagattaccctctcttgtttagagggta-tttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaata 17286419  T
Q  335 ctataaatgagtcaat 350  Q
      | ||||||||||||    
T  17286420 tcacaaatgagtcaat 17286435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 33244607 - 33244670
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat 303  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33244607 ggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaat 33244670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 250 - 350
Target Start/End: Complemental strand, 44884819 - 44884722
Alignment:
Q  250 agattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtca 348  Q
    ||||||| || ||||||||||||||||||||||||    ||||||||||||||||||| |||||||||||||  ||||||||||||  ||||||||||||    
T  44884819 agattactctctcttatttagagggtattttaccc----atgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatgagtca 44884724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 350
Target Start/End: Complemental strand, 21737502 - 21737404
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg-ctataaatgagtcaa 349  Q
    |||||||| |||||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||||||| | |||||||||||||    
T  21737502 attaccctctcttatttag-gtgtattt-accctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcaataaatgagtcaa 21737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 20119885 - 20119952
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20119885 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 20119952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 725692 - 725610
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||  | |||||||||||    
T  725692 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatataatatacatagataacattaaatg 725610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 48605725 - 48605797
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||| |||||||||||||||||||||||| ||||||||||||| | |||||||||||  ||||||||||||||    
T  48605725 ttactctctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtcataaatgagtcaat 48605797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 16277724 - 16277665
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16277724 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 16277665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 19063904 - 19063971
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| |||||||| ||||||||||| ||| |||||||||||||||||    
T  19063904 ggttttttctacattaccctctcttgtttagaggatattttaccctttcaagatatcaaccaatcaaa 19063971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 44459462 - 44459395
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  44459462 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacat 44459395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 4859584 - 4859648
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  4859584 ttaccctctcttgtttagagggtaatttaccctctcatcatatcaaccaatcaaaatgtaatata 4859648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 8391439 - 8391533
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||||||||||| |||| ||||  ||||||||  ||| ||||||||||||| |||||||| ||||| ||||||| |||||||||||||    
T  8391439 ggtttttcctagattaccctctcttgtttatggggtatttatccc-ctcatgatatcaaacaatcaaaatgtaacatacattgacaacattaaatg 8391533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 9663758 - 9663676
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||| |||| ||||||||||| || || ||||||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  9663758 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 9663676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 41336130 - 41336197
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||    
T  41336130 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatacat 41336197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 33246808 - 33246741
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| |||||||| || ||||| ||||||||||||||||||||| |||||||||||||||    
T  33246808 attaccctctcttgtttagagg-taatttactctctcatgatatcaaccaatcaaaatgtaatatacat 33246741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 41858712 - 41858648
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatata 316  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||| || | ||||||||||||    
T  41858712 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaactaattaaaatgtaatata 41858648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 40015830 - 40015779
Alignment:
Q  266 tttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  40015830 tttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatata 40015779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 41405938 - 41406016
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||||||| |||| ||||| ||||||||  |||| ||| |||||||||||||| ||||||||||||||    
T  41405938 ggttttttctacattaccctctcttgtttagggggtatttatccct-tcaagatatcaaccaatcaaaatgtaatataca 41406016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 46555650 - 46555583
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| |||||||| ||||||||||||| |||| ||||||||||    
T  46555650 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatataatatacat 46555583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 241595 - 241518
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaa-----atgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||| ||||||||||||||||| |||     |||||||||| ||| |||||||||||||  ||||||||||||||    
T  241595 tttaccccctcatgatatcaaccaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagtcaat 241518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 18995110 - 18995069
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  18995110 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 18995069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 19233850 - 19233739
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgc--ta 337  Q
    ||||||| ||||||||||| ||||  |||| | |||||| |||| ||||| ||||||| |||||||| | |||||||||||  |||||||||||||   |    
T  19233850 gttttttttagattaccctctcttgcttagggagtattt-accccctcataatatcaatcaatcaaaatataatatacattggcaacattaaatgccaaa 19233752  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  19233751 taaatgagtcaat 19233739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 44882577 - 44882649
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| |||||||  |||| |||||||| || |||||||||| |||||||||||||||| |||||||||||||||    
T  44882577 tctacattacccactcttgtttagagg-taatttaccctcttatgatatcaaccaatcaaaatgtaatatacat 44882649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 47909478 - 47909437
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  47909478 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 47909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 3416277 - 3416237
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaatgtaatatacat 319  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  3416277 ttaccctctcatgatatcaactaataaaatgtaatatacat 3416237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 28588193 - 28588278
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||| ||||||| ||| |||||||||||||||||||||||        |||||||| |||| ||||||||||||||||  ||||||||||||    
T  28588193 ttttttttagattatcctctcttatttagagggtattttacc--------atatcaactaatcaaaatgtaatatacattggcaacattaaatg 28588278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 586238 - 586160
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| ||||| || |||||||||  ||||| |||||||  ||| |||||||||||||| ||||||||||||||    
T  586238 ggttttttctacattactctctcttatttatggggta-tttaccccttcaagatatcaaccaatcaaaatgtaatataca 586160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 33982671 - 33982605
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||  ||| |||| ||||||||||||    
T  33982671 ggttttttctacattaccctctcttgtttagagggta-tttaccccttcaagataccaaccaatcaaa 33982605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 37624215 - 37624145
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||| ||||| |||| ||||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  37624215 ctagataaccctctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 37624145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 38229833 - 38229767
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||| | |||| |||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  38229833 attaccatctcttgtttagagggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 38229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 46936340 - 46936270
Alignment:
Q  283 cctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgct--ataaatgagtcaat 350  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||| |||||||| |  ||||||||||||||    
T  46936340 cctctcattatatcaaccaatcaaaatctaatatacataaacaatattaaatgttaaataaatgagtcaat 46936270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 47251966 - 47252032
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| ||||| ||||| |||||||  ||| |||||||||||||||||    
T  47251966 ggttttttctacattaccctctcttgtttagggggta-tttaccccttcaagatatcaaccaatcaaa 47252032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 17968458 - 17968401
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||||||| || || |||| |||||||||||||||| ||||||||||||||    
T  17968458 tcttatttagagggtaatt-acgctcttatgatatcaaccaatcaaaatgtaatataca 17968401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 21815248 - 21815289
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  21815248 ttaccctctcaagatatcaaccaatcaaaatgtaatatacat 21815289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 30760195 - 30760154
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  30760195 ttaccctctcatgatatcaactaatcaaaatgtaatatacat 30760154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 4621484 - 4621593
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||    
T  4621484 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataa 4621583  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  4621584 atgagtcaat 4621593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 23345171 - 23345282
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  23345171 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaatatacatttacaacattaaatggcat 23345270  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  23345271 aaatgagtcaat 23345282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 26965364 - 26965475
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  26965364 ggttttttctaaattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 26965463  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  26965464 aaatgagtcaat 26965475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 278803 - 278690
Alignment:
Q  238 tgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgct 336  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||      
T  278803 tgggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc 278704  T
Q  337 ataaatgagtcaat 350  Q
    ||||||||||||||    
T  278703 ataaatgagtcaat 278690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 637049 - 637162
Alignment:
Q  238 tgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgct 336  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||      
T  637049 tgggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc 637148  T
Q  337 ataaatgagtcaat 350  Q
    ||||||||||||||    
T  637149 ataaatgagtcaat 637162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 238 - 350
Target Start/End: Original strand, 822852 - 822965
Alignment:
Q  238 tgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgct 336  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||      
T  822852 tgggttttttctagattaccctctcatatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtc 822951  T
Q  337 ataaatgagtcaat 350  Q
    ||||||||||||||    
T  822952 ataaatgagtcaat 822965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 3703168 - 3703279
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||  ||    
T  3703168 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtcat 3703267  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  3703268 aaatgagtcaat 3703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 16097682 - 16097573
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||   |    
T  16097682 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcgt 16097583  T
Q  339 aaatgagtca 348  Q
    ||||||||||    
T  16097582 aaatgagtca 16097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 17946582 - 17946694
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgcta 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||  ||||||||||||  |    
T  17946582 gggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatgtaatatatattgtcaacattaaatgtca 17946681  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  17946682 taaatgagtcaat 17946694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 38059243 - 38059354
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||  ||    
T  38059243 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgtcat 38059342  T
Q  339 aaatgagtcaat 350  Q
     |||||||||||    
T  38059343 caatgagtcaat 38059354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 41182400 - 41182511
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||  ||    
T  41182400 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaacaaatcaaaatgtaatatacattggcaacattaaatgtcat 41182499  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  41182500 aaatgagtcaat 41182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 6096898 - 6096790
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||    
T  6096898 ttttttctagattaccctctcttatttagaggatattt-accctctcataatatcaaccaatcaaaatgtaatatacattaacaacattaaatgtcataa 6096800  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  6096799 atgagtcaat 6096790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 39860017 - 39859906
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgcta 337  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||  |    
T  39860017 gggttttttctagattaccctctcttgtttagagggta-tttaccctctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatgtca 39859919  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  39859918 taaatgagtcaat 39859906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 2081366 - 2081477
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  2081366 ggttttttctagattaccctatcttatttagagtgtattttaccttatcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 2081465  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  2081466 aaatgagtcaat 2081477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 18957474 - 18957367
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||   ||    
T  18957474 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatatcat 18957375  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  18957374 aaatgagt 18957367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 30475974 - 30476083
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||   ||||    
T  30475974 ttttttctagattaccctctcttgtttatagggtattttaccctcttatgatatcaaccaatcaagatgtaatatacattggcaacattaaatatcataa 30476073  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  30476074 atgagtcaat 30476083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 38576588 - 38576696
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||  ||||    
T  38576588 ttttttctagattaccctctcttgtttagagggta-tttaccctctcatgatatcaaccaatcaaaatgtaatatacatcgacaacattaaatgtcataa 38576686  T
Q  341 atgagtcaat 350  Q
    || |||||||    
T  38576687 ataagtcaat 38576696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 15881233 - 15881342
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||   |||||||||||  ||||    
T  15881233 ttttttttagattactctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtcataa 15881332  T
Q  341 atgagtcaat 350  Q
    || |||||||    
T  15881333 ataagtcaat 15881342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 40618564 - 40618470
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||||| |||| ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  40618564 ggttttttctagattaccctatcttgtttagggggta-tttaccccctcatgatatcaaccaatcaacatgtaatatacattgacaacattaaatg 40618470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 17852389 - 17852494
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||     | |||||||||||||  ||    
T  17852389 ggttttttctagattaccctctcatatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaata-----tgacaacattaaatgtcat 17852483  T
Q  339 aaatgagtcaa 349  Q
    |||||||||||    
T  17852484 aaatgagtcaa 17852494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 45407245 - 45407353
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||| ||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||| || ||||||||||  ||||    
T  45407245 ttttttctagattatcctctcttgtttagagggtatttacccct-tcatgatatcaaccaatcaaaatgtaatatacattgacgacattaaatgtcataa 45407343  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  45407344 atgagtcaat 45407353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 40302414 - 40302524
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||| ||||  || |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||   |    
T  40302414 ggttttttctatattattctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatgtaatatacattgacaacgttaaatgtctt 40302512  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  40302513 aaatgagtcaat 40302524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 30112249 - 30112138
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg-cta 337  Q
    |||||||||||||| ||||| |||| ||||| | |||||| |||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||| | |    
T  30112249 ggttttttctagatgaccctctcttgtttagggagtattt-accctctcatgatatcaatcaatcaaaatgtaatatccattgacaacattaaatgtcaa 30112151  T
Q  338 taaatgagtcaat 350  Q
    |||||||||||||    
T  30112150 taaatgagtcaat 30112138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 3852098 - 3851984
Alignment:
Q  236 tttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatatacattaacaacattaaatg 334  Q
    |||||| ||||| |||||||| || || | | |||||||||||| ||||||||||||||| |||||||||| ||||||||||| || |||||||||||||    
T  3852098 tttggggtttttttagattactctctcgtgtctagagggtattt-accctctcatgatattaaccaatcaatatgtaatatacgttgacaacattaaatg 3852000  T
Q  335 ctataaatgagtcaat 350  Q
      ||||||||||||||    
T  3851999 tcataaatgagtcaat 3851984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 42647377 - 42647263
Alignment:
Q  236 tttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||| ||||||||||| | || ||||||||||| |||||||  |||||||||||||||||| |||| |||||||||||  || |||||||||    
T  42647377 tttgggttttttttagattaccctctattgtttagagggta-tttaccccttcatgatatcaaccaatcaaaatataatatacattgtcagcattaaatg 42647279  T
Q  335 ctataaatgagtcaat 350  Q
      ||||||||||||||    
T  42647278 tcataaatgagtcaat 42647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 25583812 - 25583745
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25583812 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 25583745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 27911894 - 27911961
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27911894 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 27911961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 27958313 - 27958380
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27958313 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 27958380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 17853482 - 17853400
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||  | |||||||||||    
T  17853482 ttaccctctcttgtttagagggtaatttactctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatg 17853400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 28084755 - 28084860
Alignment:
Q  245 tttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaatgtaatatacattaacaacattaaatg-ctataaatg 343  Q
    |||||| |||||||| |||| ||||| |||||||| |||||||||||||||||||||   ||||||||||||||||  |||||||||||| | |||||||    
T  28084755 tttctaaattaccctatcttgtttagggggtattt-accctctcatgatatcaaccataaaaatgtaatatacattcgcaacattaaatgtcaataaatg 28084853  T
Q  344 agtcaat 350  Q
    | |||||    
T  28084854 aatcaat 28084860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 38099331 - 38099221
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgt-aatatacattaacaacattaaatgctata 339  Q
    ||||||||| |||||||| |||| |||||||||||||||| ||||| || ||||||| ||||| |||||| |||||| ||  ||||||||||| | ||||    
T  38099331 ttttttctaaattaccctctcttgtttagagggtattttatcctcttataatatcaatcaatcaaaatgtaaatataaatggacaacattaaacgttata 38099232  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  38099231 aatgagtcaat 38099221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 41181669 - 41181741
Alignment:
Q  278 tttaccctctcatgatatcaaccaatca-aatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||||    
T  41181669 tttaccctc-catgatatcaaccaatcagaatgtaatatacattgacaacattaaatgtcataaatgagtcaat 41181741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 4622951 - 4622883
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  4622951 attaccctctcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacat 4622883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 41546915 - 41546810
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    ||||| ||||||||| || || |||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||  || |||||||||  ||||    
T  41546915 tttttactagattactctctcctatttagagggtattt-accctctcatcatatcaaccaatcaaaatgtaa-atacattggcagcattaaatgtcataa 41546818  T
Q  341 atgagtca 348  Q
    ||||||||    
T  41546817 atgagtca 41546810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 276589 - 276654
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  276589 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatata 276654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 639260 - 639195
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  639260 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatata 639195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 825066 - 825001
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  825066 attaccctctcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatata 825001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 316
Target Start/End: Original strand, 44255961 - 44256030
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatata 316  Q
    |||| ||||||| ||||||||||||| || ||||||||||||||||||||||||| | ||||||||||||    
T  44255961 ctaggttaccctctcttatttagaggataatttaccctctcatgatatcaaccaattaaaatgtaatata 44256030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 17948705 - 17948637
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| |||| |||||||||||||||||||| | |||||||||||||||    
T  17948705 attaccctctcttgtttagagggtaatttatcctctcatgatatcaaccaattaaaatgtaatatacat 17948637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 35019235 - 35019301
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||||||||||||||||||  |||| ||| |||||||||||||||||    
T  35019235 ggttttttctacattaccctatcttatttagagggtatttatccct-tcaagatatcaaccaatcaaa 35019301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 38060964 - 38060905
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  38060964 tcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacat 38060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 15825064 - 15825145
Alignment:
Q  237 ttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||| ||||||| |||||||| ||||||||| ||| ||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  15825064 ttgggtattttctacattaccctctcttatttataggatattt-accctttcaagatatcaaccaatcaaaatgtaatataca 15825145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 39857878 - 39857952
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||| |||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||  | |||||||||||    
T  39857878 tcttgtttatagggtaatttaccctctcatgatatcaaccaatcaaaatataatatacatagataacattaaatg 39857952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 36193447 - 36193374
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||  ||| ||||||||  ||||||||||||||    
T  36193447 tttatcctatcatgatatcaaccaatcaaaatgtaatatacattgccaaaattaaatgtcataaatgagtcaat 36193374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 13139358 - 13139430
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||| ||||||||||||| ||| |||||||||||| | || ||||||||  ||||||||||||||    
T  13139358 ttaccctctcatcatatcaaccaatcaaaaggtaatatacattgataaaattaaatgtcataaatgagtcaat 13139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 30554749 - 30554813
Alignment:
Q  287 tcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||| |||||||| ||||||||||||| |||| ||||||||  ||||||||||||||    
T  30554749 tcatgatatcaatcaatcaaaatgtaatatacattgacaatattaaatgtcataaatgagtcaat 30554813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 44258086 - 44258030
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||    
T  44258086 ttaccctctcataatatcaaccaatcaaaatgtaatatacattggcaacattaaatg 44258030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 39070376 - 39070298
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||| ||| |||| ||||||| |||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  39070376 ggttttttctacattatcctatcttgtttagagtgtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 39070298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 41671546 - 41671476
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatataca 318  Q
    |||||||||||| |||| |||| ||||||||| ||||| ||| |||||||||||||||| ||||||||||||    
T  41671546 ctagattaccctatcttgtttatagggtattt-accctttcaagatatcaaccaatcaacatgtaatataca 41671476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 45409341 - 45409283
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||| |||||| || |||||||||||||||||||||||| |||||||||||||||    
T  45409341 tcttatttatagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacat 45409283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 15883615 - 15883558
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatac 317  Q
    |||| ||||||||||| |||| |||||||||||||||| ||||| |||||||||||||    
T  15883615 tcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatac 15883558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 18955120 - 18955173
Alignment:
Q  267 ttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  18955120 ttagagggtaatttatcctctcatgatatcaaccaatcaaaatgtactatacat 18955173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 40304582 - 40304541
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  40304582 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 40304541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 38577251 - 38577185
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| | |||||||||||||| || || |||||||||||||||||| || |||||||||||||||    
T  38577251 ttaccctcttttatttagagggtaatt-actctctcatgatatcaaccattcaaaatgtaatatacat 38577185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 42737558 - 42737484
Alignment:
Q  278 tttaccctctcatgatatcaaccaatca-aatgt-aatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||| ||||||||||||||||| ||||| |||||||| | |||| ||||||||  ||||||| ||||||    
T  42737558 tttaccctcttatgatatcaaccaatcagaatgtaaatatacaatgacaatattaaatgtcataaatgggtcaat 42737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 3705305 - 3705264
Alignment:
Q  279 ttaccctctcatgatatcaaccaa-tcaaatgtaatatacat 319  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  3705305 ttaccctctcatgatatcaaccaattaaaatgtaatatacat 3705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 13141478 - 13141437
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  13141478 ttaccctctcatgatatcaaccaatcaaaatataatatacat 13141437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 16095805 - 16095846
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  16095805 ttaccctctcatgatatcaaccaatcaaaatataatatacat 16095846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 18089558 - 18089490
Alignment:
Q  266 tttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatg 334  Q
    ||||||||||| || ||||| |||||||||||||||| | |||| ||||||||||  |||||||||||||    
T  18089558 tttagagggtaatt-accctttcatgatatcaaccaattaaaatataatatacatagacaacattaaatg 18089490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 30556860 - 30556819
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  30556860 ttaccctctcatgatatcaatcaatcaaaatgtaatatacat 30556819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 41544849 - 41544929
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaat 333  Q
    ||||||| |||| |||||| |||| || | |||||||||||||||||||||| |||||||||||| || |  ||||||||||    
T  41544849 ttaccctatcttgtttagatggtaatt-atcctctcatgatatcaaccaatcaaaatgtaatatatataagtaacattaaat 41544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 2082465 - 2082413
Alignment:
Q  268 tagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||||    
T  2082465 tagagagtaatttaccctctcatgatatcaatcaatcaaaatgtaatgtacat 2082413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 3846520 - 3846575
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||| ||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  3846520 tcttgtttagagggtaatt-accctctcatgatataaaccaatcaaaatgtaatata 3846575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 5588179 - 5588103
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||||||| || ||||  |||  ||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  5588179 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatgtaatata 5588103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 15825981 - 15825910
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||| | | |||| |||||||| ||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  15825981 tctagattaacgtctcttgtttagaggatattt-accctttcaagatatcaaccaatcaaaatgtaatataca 15825910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 18087552 - 18087608
Alignment:
Q  296 caaccaatcaaa-tgtaatatacattaacaacattaaatg-ctataaatgagtcaat 350  Q
    |||||||||||| |||||||||||||  |||||||||||| | ||||||||||||||    
T  18087552 caaccaatcaaagtgtaatatacattggcaacattaaatgtcaataaatgagtcaat 18087608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 4230848 - 4230957
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||    
T  4230848 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaactaatcaacatgtaatatacattgacaacattaaatgttataa 4230947  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  4230948 atgagtcaat 4230957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 23022086 - 23021975
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  23022086 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 23021987  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  23021986 aaatgagtcaat 23021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 27330113 - 27330220
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| ||    
T  27330113 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgccat 27330212  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  27330213 aaatgagt 27330220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 53583765 - 53583654
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||    
T  53583765 ggttttttctagattaccctctcttatttagagggtattttatcctctcatgatatcaaccaatcaaaatgtaatatacattagcaacattaaatgtcat 53583666  T
Q  339 aaatgagtcaat 350  Q
    | ||||||||||    
T  53583665 atatgagtcaat 53583654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 41695914 - 41696024
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  41695914 ggttttttctagattaccctatcttatttagaggttattttactctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 41696013  T
Q  339 aaatgagtcaa 349  Q
    |||||||||||    
T  41696014 aaatgagtcaa 41696024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 44841226 - 44841335
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||  ||||    
T  44841226 ttttttctagattaccgtctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataa 44841325  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  44841326 atgagtcaat 44841335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 50546473 - 50546582
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||||    
T  50546473 ttttttctagattaccctctcttatttatagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataa 50546572  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  50546573 atgagtcaat 50546582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 8849752 - 8849863
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||| ||    
T  8849752 ggttttttctaggttaccctatcttatttagagggtattttaccatctcatgatatcaaccaatcaaaatgtaatatagattggcaacattaaatgccat 8849851  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  8849852 aaatgagtcaat 8849863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 11123706 - 11123595
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||  ||||||||||||  ||    
T  11123706 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatctagattggcaacattaaatgtcat 11123607  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  11123606 aaatgagtcaat 11123595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 13243634 - 13243527
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||    
T  13243634 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcat 13243535  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  13243534 aaatgagt 13243527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 40908550 - 40908439
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||   ||    
T  40908550 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatatcat 40908451  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  40908450 aaatgagtcaat 40908439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 240 - 348
Target Start/End: Complemental strand, 29894818 - 29894709
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  29894818 ggttttttctagattatcctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 29894719  T
Q  339 aaatgagtca 348  Q
    ||||||||||    
T  29894718 aaatgagtca 29894709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 2220037 - 2219926
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||||  ||    
T  2220037 ggttttttttagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggtaacattaaatgtcat 2219938  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  2219937 aaatgagtcaat 2219926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 18763974 - 18763864
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||  ||    
T  18763974 ggttttttctagattaccttctcttatttagagggtattt-atcctctcatgatatcaaccaatcaagatgtaatatacattgacaacattaaatgtcat 18763876  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  18763875 aaatgagtcaat 18763864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 37218168 - 37218262
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  37218168 gttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatg 37218262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 37787322 - 37787213
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||   ||||    
T  37787322 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatataaaccaatcaaaatgtaatatacattgacaacattaaatatcataa 37787223  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  37787222 atgagtcaat 37787213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 47910953 - 47911062
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  || |||||||||  ||||    
T  47910953 ttttttctagattatcctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcagcattaaatgtcataa 47911052  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  47911053 atgagtcaat 47911062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 22606906 - 22606795
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||| |||||||||||||  ||    
T  22606906 ggttttttttagattatcctctcttatttagagggtattttaccctcttattatatcaaccaatcaaaatataatatacattgacaacattaaatgtcat 22606807  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  22606806 aaatgagtcaat 22606795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 41103785 - 41103674
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||  ||||||||||||  ||    
T  41103785 ggttttttctagatcaccatctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatgtaatatacattggcaacattaaatgtcat 41103686  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  41103685 aaatgagtcaat 41103674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 350
Target Start/End: Complemental strand, 45172763 - 45172664
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||| |||||    
T  45172763 attaccctctcttatttagagggtattttactctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgttttaaatgaatcaat 45172664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 51720857 - 51720971
Alignment:
Q  237 ttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgt-aatatacattaacaacattaaatg 334  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||    
T  51720857 ttgggttttttctagattaccctctcttatttagagagta-tttaccctctcatgaaatcaaccaatcaaaatgtaaatatacattgacaacattaaatg 51720955  T
Q  335 ctataaatgagtcaat 350  Q
      ||||||||||||||    
T  51720956 tcataaatgagtcaat 51720971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 55219940 - 55219832
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||  ||||    
T  55219940 ttttttctagattaccctctcttatttagagggta-tttaccctctcatgatatcaaccaattaaaaagtaatatacattgacaactttaaatgtcataa 55219842  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  55219841 atgagtcaat 55219832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 31311666 - 31311776
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||  ||    
T  31311666 ggttttttctagattaccctctcttgtttagagcgtattt-accctctcatgatataaaccaatcaaaatgtaatatatattgacaacattaaatgtcat 31311764  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  31311765 aaatgagtcaat 31311776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 50610658 - 50610547
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| |||||||| || | ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||| ||||||||  ||    
T  50610658 ggttttttttagattactctcttttatttagagggtattttatcctctaatgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtcat 50610559  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  50610558 aaatgagtcaat 50610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 27128228 - 27128120
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||  ||| ||||||  | ||||    
T  27128228 ttttttctagattaccctatcttatttagagggtattttactctatcatgatatcaaccaatcaaaatgtaatatacattggcaatattaaa-accataa 27128130  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  27128129 atgagtcaat 27128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 30438267 - 30438376
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||   || ||||||||  ||||    
T  30438267 ttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaacaaattaaaatgtaatatacattggtaatattaaatgtcataa 30438366  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  30438367 atgagtcaat 30438376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 38698867 - 38698759
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||    
T  38698867 ttttttttagattaccctctcttgtttagaggatattt-accctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatatcataa 38698769  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  38698768 atgagtcaat 38698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 15082709 - 15082820
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| | ||||||||||   ||    
T  15082709 ggttttttctagattatcctctcttatttagaaggtattttaccctctcatgatataaatcaatcaaaatgtaatatacattgagaacattaaatatcat 15082808  T
Q  339 aaatgagtcaat 350  Q
    ||| ||||||||    
T  15082809 aaacgagtcaat 15082820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 42828049 - 42827939
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||| | | || |||||||||||||| |||||||||||||||||| |||||||| | ||||||||||| |||||||||||||  ||    
T  42828049 ggttttttctagattaccatcttttgtttagagggtattt-accctctcatgatatcaatcaatcaaactataatatacattgacaacattaaatgtcat 42827951  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  42827950 aaatgagtcaat 42827939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 52745654 - 52745765
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||| ||||| ||||||||||||||||   |||||||| |||||||||| ||||| ||||||||||||||||  ||||||||||||  ||    
T  52745654 ggttttttctagatcaccctctcttatttagagggtaaaataccctcttatgatatcaatcaatcaaaatgtaatatacattggcaacattaaatgtcat 52745753  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  52745754 aaatgagtcaat 52745765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 45051738 - 45051847
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||  |||  |||||||  |||    
T  45051738 gttttttctagattatcctctcttatttagaggatattttaccctctcatgatatcaaccaatcaaaatgtaatatagattggcaa-tttaaatgtcata 45051836  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  45051837 aatgagtcaat 45051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 350
Target Start/End: Original strand, 50535960 - 50536065
Alignment:
Q  245 tttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatg 343  Q
    |||||| |||||||| |||| |||| ||||||||| |||||||||||||||||||||||| ||||||||||||| || |||||||||||||  |||||||    
T  50535960 tttctaaattaccctctcttgtttatagggtattt-accctctcatgatatcaaccaatcaaaatgtaatataccttgacaacattaaatgtcataaatg 50536058  T
Q  344 agtcaat 350  Q
    |||||||    
T  50536059 agtcaat 50536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 37178242 - 37178352
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||| |||||||| |||| ||||||| |||||   |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||    
T  37178242 ggttttttctaaattaccctctcttgtttagagcgtattaacccct-tcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 37178340  T
Q  339 aaatgagtcaat 350  Q
    |||| |||||||    
T  37178341 aaataagtcaat 37178352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 53845139 - 53845206
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  53845139 ttaccctctcttatttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 53845206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 3890777 - 3890881
Alignment:
Q  246 ttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatga 344  Q
    |||||||||||||| |||| ||||||| ||||||  |||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||  ||||||||    
T  3890777 ttctagattaccctatcttgtttagagagtatttacccct-tcatgatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatga 3890875  T
Q  345 gtcaat 350  Q
     |||||    
T  3890876 ctcaat 3890881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 11121080 - 11121152
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11121080 ctaggttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 11121152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 30043692 - 30043624
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  30043692 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 30043624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 2217883 - 2217966
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||| || ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||    
T  2217883 attactctctcttatttagaaggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatg 2217966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 13213299 - 13213366
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  13213299 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 13213366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 23019699 - 23019758
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  23019699 tcttatttagagggtaatttaccctctcatgatatcaaccaatcgaaatgtaatatacat 23019758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 37785292 - 37785359
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 37785359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 44843398 - 44843331
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  44843398 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 44843331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 4233248 - 4233154
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagt 346  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    |||||||||||  ||||||||||    
T  4233248 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacataggtaacattaaatgtcataaatgagt 4233154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 27320873 - 27320947
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||    
T  27320873 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacatagataacattaaatg 27320947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 30361644 - 30361752
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||||| |||||||  |||| | |||||||||||||| | |||||||||||| ||| ||||| |||||||  ||||    
T  30361644 ttttttctagattaccctatcttgtttagaaggtatttatccct-taatgatatcaaccaattaaaatgtaatatatattgacaactttaaatgtcataa 30361742  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  30361743 atgagtcaat 30361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 55413232 - 55413124
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaa-tgctata 339  Q
    |||||||||||||||||| |||| ||||  |||||||| | ||||| |||||||||||||||| |||||||||||||||| |||||| |||| | | |||    
T  55413232 ttttttctagattaccctttcttgtttaaggggtattt-atcctcttatgatatcaaccaatcaaaatgtaatatacattgacaacaataaatttcaata 55413134  T
Q  340 aatgagtcaa 349  Q
    ||||||||||    
T  55413133 aatgagtcaa 55413124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 333
Target Start/End: Original strand, 10825749 - 10825840
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaat 333  Q
    |||||| ||||||||||| |||| ||||| ||||||||  |||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||    
T  10825749 ttttttttagattaccctctcttgtttagggggtatttg-ccctctcatgatattaaccaatgaaaatgtaatatacattgacaacattaaat 10825840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 18412139 - 18412067
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||  ||||||||||||||    
T  18412139 ttaccctctcatgatatcaaccaatcaaaatataatatacattggcaacattaaatgtcataaatgagtcaat 18412067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 27239267 - 27239195
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| |||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27239267 ctaggttaccctcacttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 27239195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 333
Target Start/End: Original strand, 53776402 - 53776493
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaat 333  Q
    |||||||||||||| ||| | ||||||||  ||||||| ||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  53776402 ttttttctagattatcctcttttatttaggaggtattt-accatctcatgatatcaaccaattaaaatgtaatatacattgacaacattaaat 53776493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 15084763 - 15084704
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15084763 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 15084704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 22604724 - 22604791
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  22604724 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatacat 22604791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 8852350 - 8852283
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||||| || ||||| ||||||||||||||||||||| |||||||||||||||    
T  8852350 ttaccctctcttgtttagaggataatttactctctcatgatatcaaccaatcaaaatgtaatatacat 8852283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 40906007 - 40906074
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||| |||| ||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||    
T  40906007 attaccctctcttgtttagagggtaatttaccctctcgtgatattaaccaatcaaaatgtaatataca 40906074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 41101517 - 41101584
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| ||||||||||||| || |||||| |||||||||||||| ||||| |||||||||||||||    
T  41101517 ttaccctctcttatttagaggataatttaccttctcatgatatcaatcaatcaaaatgtaatatacat 41101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 42825876 - 42825935
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  42825876 tcttgtttagagggtaatttaccctctcatgatatcaaccagtcaaaatgtaatatacat 42825935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 43338222 - 43338308
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaat 333  Q
    |||| |||||||  |||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |  ||||||||||    
T  43338222 tctacattacccaatcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaat 43338308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 50935460 - 50935526
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||| ||| |||||||||||||||||    
T  50935460 ggttttttctacattaccctctcttgtttagagggta-tttaccctttcaagatatcaaccaatcaaa 50935526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 6177403 - 6177347
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  6177403 tcttgtttagagggtaatttaccctctcatgatatcaactaatcaaaatgtaatata 6177347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 37220306 - 37220242
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||| ||||||||||| |||||  |||||||||||||||||||| ||||||||||||    
T  37220306 ttaccctctcttgtttagagggtaatttactatctcatgatatcaaccaatcaaaatgtaatata 37220242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 18410065 - 18410132
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| ||||||||| ||| || ||||  ||||||||||||||||||||| |||||||||||||||    
T  18410065 ttaccctctcttatttaaaggataatttattctctcatgatatcaaccaatcaaaatgtaatatacat 18410132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 22981466 - 22981400
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| ||||||||||||| |||||||| || |||||||  ||| |||||||||||||||||    
T  22981466 ggttttttctacattaccctgtcttgtttagaggata-tttaccccttcaagatatcaaccaatcaaa 22981400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 32001286 - 32001216
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||||||||| ||||| |||||||| |||  ||||||||||||| ||||||||||||||    
T  32001286 ctagattaccctctcttatttagggggta-tttaccctttcaaaatatcaaccaatcaaaatgtaatataca 32001216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 36465585 - 36465651
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||||||||||||||| |||| ||||||||||| |||||| | |||  ||||||||||||||||    
T  36465585 ggttttttctagattaccctctcttgtttagagggta-tttaccttttcaacatatcaaccaatcaaa 36465651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 37523067 - 37523130
Alignment:
Q  272 gggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatg 334  Q
    ||||| |||| |||||||||||||||||||| | |||||||||||||||  |||||||||||||    
T  37523067 gggtaatttatcctctcatgatatcaaccaattaaaatgtaatatacatagacaacattaaatg 37523130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 45169828 - 45169895
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||| ||||||| |||||||| |||| |||||||||||||||    
T  45169828 ttaccctctcttttttagagggtaatttactctctcataatatcaactaatcaaaatgtaatatacat 45169895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 47913155 - 47913088
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||| |||||| |||||||||||||| |||| ||||||||||    
T  47913155 ttaccctctcttttttagagggtaatttactctctcaagatatcaaccaatcaaaatataatatacat 47913088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 50548694 - 50548627
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||| |||| |||| | |||||||||||||||||||| |||||||||||||||    
T  50548694 ttaccctctcttgtttagatggtaatttatcatctcatgatatcaaccaatcaaaatgtaatatacat 50548627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 30440460 - 30440419
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  30440460 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 30440419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 38235378 - 38235419
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  38235378 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 38235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 54410763 - 54410687
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||||||||| |||| ||||||||||||||  ||||   | |||||||||||||| ||||||||||||||    
T  54410763 ttttttctagattaccctatcttgtttagagggtatttacccctaaaa-gatatcaaccaatcaaaatgtaatataca 54410687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 22977835 - 22977905
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||| ||||| |||||||| | | |||||||||||||| ||||||||||||||    
T  22977835 ctagattaccctctcttgtttagggggta-tttacccttttaagatatcaaccaatcaaaatgtaatataca 22977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 27126060 - 27126134
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatg 334  Q
    |||| |||||||| || ||||| |||| |||||||||||||| | |||||||||||||||  | |||||||||||    
T  27126060 tcttgtttagaggataatttactctcttatgatatcaaccaattaaaatgtaatatacatagataacattaaatg 27126134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 40424864 - 40424790
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaaa-tgtaa-tatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||||  |||||||||| ||||| ||| ||||| |||||||| |||||||||||||  ||||||||||||||    
T  40424864 tttacccttccatgatatcagccaataaaaatgtaaatatacattgacaacattaaatgtaataaatgagtcaat 40424790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 16463788 - 16463829
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  16463788 ttaccctctcaagatatcaaccaatcaaaatgtaatatacat 16463829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 22731373 - 22731449
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||||||| || ||||  |||  ||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  22731373 gttttttttagattactctctcttgattaaggggtgatttaccccctcatgatatcaaccaatcaaaatgtaatata 22731449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 29864519 - 29864559
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  29864519 ttaccctctcataatatcaaccaatcaaaatgtaatataca 29864559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 40423540 - 40423592
Alignment:
Q  283 cctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||||||||| |||||||| ||||||||||||||| |  |||||||||||    
T  40423540 cctctcatgatataaaccaatcaaaatgtaatatacataagtaacattaaatg 40423592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 41698283 - 41698227
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||| |||||| ||||  ||| |||||||||||||||||||||| ||||||||||||    
T  41698283 tcttgtttagaaggtaacttatcctctcatgatatcaaccaatcaaaatgtaatata 41698227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 50938579 - 50938508
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatataca 318  Q
    ||||||||| ||| |||| |||||| ||||||| ||||| ||| |||||||||||| | ||||||||||||||    
T  50938579 tctagattatcctctcttgtttagaaggtattt-accctttcaagatatcaaccaattaaaatgtaatataca 50938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 53778478 - 53778426
Alignment:
Q  283 cctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||| ||||||||||||| |||||||||||||||  |||| ||||||||    
T  53778478 cctctcataatatcaaccaatcaaaatgtaatatacatagacaatattaaatg 53778426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 54409366 - 54409437
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||||| |||| ||||| ||||| |||||| | ||| ||||| |||||||| ||||||||||||||    
T  54409366 tctagattaccctatcttgtttagggggta-tttaccttttcaagatataaaccaatcaaaatgtaatataca 54409437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 16922318 - 16922207
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  16922318 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 16922219  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  16922218 aaatgagtcaat 16922207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 235 - 350
Target Start/End: Complemental strand, 27784500 - 27784384
Alignment:
Q  235 gtttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat-caaatgtaatatacattaacaacattaaat 333  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  27784500 gttttggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaataaaaatgtaatatacattgacaacattaaat 27784401  T
Q  334 gctataaatgagtcaat 350  Q
    |  ||||||||||||||    
T  27784400 gtcataaatgagtcaat 27784384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 14106008 - 14105897
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  14106008 ggttttttctagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 14105909  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  14105908 aaatgagtcaat 14105897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 17557572 - 17557679
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  17557572 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 17557671  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  17557672 aaatgagt 17557679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 23582283 - 23582172
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||||||  ||    
T  23582283 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaattaaaatgtaatatacattgacaacattaaatgtcat 23582184  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  23582183 aaatgagtcaat 23582172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 4587861 - 4587972
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||  ||||||||||||  ||    
T  4587861 ggttttttctagattaccctctcttatttagaggatattttaccctctcatgatatcaaccaattaaaatgtaatatatattggcaacattaaatgtcat 4587960  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  4587961 aaatgagtcaat 4587972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 953654 - 953763
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    ||||||||||||||| || | || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||||    
T  953654 ttttttctagattactctattttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataa 953753  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  953754 atgagtcaat 953763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 344
Target Start/End: Complemental strand, 28581025 - 28580924
Alignment:
Q  243 tttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaa 341  Q
    ||||| ||||||||||| |||| |||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||  |||||    
T  28581025 tttttttagattaccctctcttgtttagagggtattt-atcctctcatgatataaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaa 28580927  T
Q  342 tga 344  Q
    |||    
T  28580926 tga 28580924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 5686338 - 5686447
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||||||| | || ||||||||||||||| | ||||||||||||||||||||| |||||||||||| |||   || ||||||||  |||    
T  5686338 gttttttctagattaccctcttttgtttagagggtatttt-ctctctcatgatatcaaccaatcaaaatgtaatatatattgttaatattaaatgtcata 5686436  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  5686437 aatgagtcaat 5686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 11837846 - 11837779
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11837846 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 11837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 23580091 - 23580158
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  23580091 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 23580158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 27782272 - 27782339
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27782272 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 27782339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 14103797 - 14103879
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||  | |||||||||||    
T  14103797 ttaccctctcttgtttagagggtaatttaccctctcacgatatcaaccaatcaaaatgtaatatacatagataacattaaatg 14103879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 24083004 - 24083085
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatca-aatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  24083004 ttaccctctcttatttagagggtaatt-accctctcatgatatcaaccaatcataatgtaatatacataggcaacattaaatg 24083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 4590070 - 4590003
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat-caaatgtaatatacat 319  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||||    
T  4590070 ttaccctctcttatttagagggtaatttatcctctcatgatatcaatcaatccaaatgtaatatacat 4590003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 11154882 - 11154815
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| ||||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  11154882 ttaccctttcttatttaaagggtaatttagcctctcatgatatcaaccaatcaaaatgtaatatacat 11154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 17551076 - 17551009
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  17551076 ttaccctctcttgtttaaagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 17551009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 27438218 - 27438285
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| | |||||||||||||||||||| |||||||||||||||    
T  27438218 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaatatacat 27438285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 15287501 - 15287550
Alignment:
Q  286 ctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  15287501 ctcatgatatcaaccaatcaaaatgtaatatacattgataacattaaatg 15287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 24084587 - 24084542
Alignment:
Q  290 tgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  24084587 tgatatcaaccaatcaaaatgtaatatacattgacaacattaaatg 24084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 25109367 - 25109422
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  25109367 tcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatata 25109422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 28578430 - 28578497
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| || || ||||||| ||||||||||||| |||||||||||||||    
T  28578430 attaccctctcttctttagagggtaatt-actctctcattatatcaaccaatcaaaatgtaatatacat 28578497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 25120674 - 25120602
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||| ||||||||||| ||| ||||||| |||| |||||||| ||||| |||||||  ||||||||||||||    
T  25120674 tttaccatctcatgatat-aactaatcaaaatgtattatacatttacaacgttaaatgtcataaatgagtcaat 25120602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 13866014 - 13866090
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||||||| |||| |||  |||||| |||||||  ||| |||||||||||||| ||||||||||||||    
T  13866014 ggttttttctatattaccctatcttgttt--agggta-tttacccgttcaagatatcaaccaatcaaaatgtaatataca 13866090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 9593904 - 9593793
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||  ||    
T  9593904 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatataatatacattgacaacattaaatgtcat 9593805  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  9593804 aaatgagtcaat 9593793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 39590786 - 39590675
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  39590786 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 39590687  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  39590686 aaatgagtcaat 39590675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 822818 - 822928
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||  ||    
T  822818 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgacatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 822917  T
Q  339 aaatgagtcaa 349  Q
    |||||||||||    
T  822918 aaatgagtcaa 822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 37938494 - 37938603
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||||    
T  37938494 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataa 37938593  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  37938594 atgagtcaat 37938603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 744072 - 744183
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||  ||    
T  744072 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatatcaaccaattaaaatgtaatatacattgacaacgttaaatgtcat 744171  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  744172 aaatgagtcaat 744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 27018122 - 27018233
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  27018122 ggttttttctagattaccctctcttatttagaaggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtaat 27018221  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  27018222 aaatgagtcaat 27018233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 30128626 - 30128736
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||  |||    
T  30128626 gttttttctagattaccctctcttatttagagggtattttacgctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcata 30128725  T
Q  340 aatgagtcaat 350  Q
    ||||| |||||    
T  30128726 aatgactcaat 30128736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 31547465 - 31547575
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||  |||    
T  31547465 gttttttctagattaccctttcttgtttagagggtattttaccccttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcata 31547564  T
Q  340 aatgagtcaat 350  Q
     ||||||||||    
T  31547565 tatgagtcaat 31547575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 42609902 - 42610015
Alignment:
Q  237 ttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgc 335  Q
    ||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||     
T  42609902 ttgggttttttttagattact-tctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgt 42610000  T
Q  336 tataaatgagtcaat 350  Q
     ||||||||||||||    
T  42610001 cataaatgagtcaat 42610015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 12501478 - 12501389
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacat 328  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  12501478 ggttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcagccaatcaaaatgtaatatacattgacaacat 12501389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 7179660 - 7179769
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctata 339  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  |||    
T  7179660 gttttttctagattaccctctcttgtttagagggtatttacccct-tcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcata 7179758  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  7179759 aatgagtcaat 7179769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 19666697 - 19666586
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||   ||    
T  19666697 ggttttttctagattaccctctctaatttagaaggtattttaccctctcatgatataaaccaatcaaaatgtaatatacattggcaacattaaatatcat 19666598  T
Q  339 aaatgagtcaat 350  Q
    |||||| |||||    
T  19666597 aaatgaatcaat 19666586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 20544189 - 20544296
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||   |||||||||||  ||    
T  20544189 ggttttttctagattatcctctcttatttagagggtattttaccctctcatgatattaaccaatcaaaatataatatacattggaaacattaaatgtcat 20544288  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  20544289 aaatgagt 20544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 37272777 - 37272676
Alignment:
Q  249 tagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtc 347  Q
    ||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  37272777 tagattaccctattttgtttagagggtattt-accctctcatgatatcagccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagtc 37272679  T
Q  348 aat 350  Q
    |||    
T  37272678 aat 37272676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 15527483 - 15527379
Alignment:
Q  246 ttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatga 344  Q
    |||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||  ||||||||    
T  15527483 ttctagattaccctctcttgtttagagggtattt-accctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataaatga 15527385  T
Q  345 gtcaat 350  Q
    | ||||    
T  15527384 gacaat 15527379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 34402222 - 34402115
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    ||||||||| |||||| | |||| |||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  34402222 ttttttctaaattacc-tctcttgtttagaggatattt-accctcttatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgttataa 34402125  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  34402124 atgagtcaat 34402115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 19505117 - 19505011
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    |||||||  ||||||||||| |||| |||||||||||||| ||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||  ||    
T  19505117 ggtttttcatagattaccctctcttgtttagagggtattt-accctctcatgatatcaattaatcaaaatgtaatatacattgacaacattaaatgtcat 19505019  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  19505018 aaatgagt 19505011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 9985359 - 9985469
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||| |||||||| |||| |||||||||||||| || |  ||||||||||||| ||||||| ||||||||||||| ||||||||||||   ||    
T  9985359 ggttttttctaaattaccctctcttgtttagagggtattt-actcattcatgatatcaactaatcaaaatgtaatatacattgacaacattaaatatcat 9985457  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  9985458 aaatgagtcaat 9985469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 9591612 - 9591685
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  9591612 tctacattaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 9591685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 745796 - 745729
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  745796 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 745729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 11986659 - 11986568
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||| ||||||| ||| ||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  11986659 ttttttttagattatcctttcttatttagagg-tattt-accatctcatgatatcaaccaatcaaaatgtaatatacattagtaacattaaatg 11986568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 27020277 - 27020212
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  27020277 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatata 27020212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 12499226 - 12499293
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| | || ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12499226 ttaccctcttttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 12499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 19664770 - 19664837
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| | || ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19664770 ttaccctctattgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 19664837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 37940176 - 37940117
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37940176 tcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 37940117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 42612451 - 42612384
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  42612451 ttaccctctcttgtttagagggtaatttaccctctcataatatcaaccaatcaaaatgtaatatacat 42612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 39588266 - 39588348
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||| |  |||||||||||    
T  39588266 ttaccctctcttgtttagagggtaatttatcctctcataatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 39588348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 27552738 - 27552658
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacatt 320  Q
    ||||||||||||||||| || | || ||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||    
T  27552738 ggttttttctagattactctcttttgtttagagggtatttatccct-tcatgatatcaaccaatcaaaatgtaatatacatt 27552658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 29391046 - 29390987
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||||||| |||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  29391046 ctagattaccctctcttgtttagagggtattttaccctttcaagatttcaaccaatcaaa 29390987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 34401523 - 34401603
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaat 333  Q
    ||||||| |||| ||||||||||| || || ||||||||||||||||||||| ||||||||||||||| |  ||||||||||    
T  34401523 ttaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaat 34401603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 11078465 - 11078413
Alignment:
Q  283 cctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  11078465 cctcttatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatg 11078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 20546387 - 20546319
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| | || ||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||    
T  20546387 attaccctcttttgtttagagggtaatttacactctcatgatatcaaccaatcaaaatgttatatacat 20546319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 5099856 - 5099926
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  5099856 ctagattaccctctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 5099926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 15527348 - 15527270
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| ||||| || |||| | |||||||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  15527348 ggttttttctacattactctctcttgtctagagggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 15527270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 37270252 - 37270333
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| || ||||| | |||||||||||||||| ||||||||||||||| |  |||||||||||    
T  37270252 ttaccctctcttgtttagagggtaatt-accctattatgatatcaaccaatcaaaatgtaatatacataaggaacattaaatg 37270333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 6720955 - 6720879
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||| |||||||| |||| ||||||||||||||  |||| ||| |||||||| ||||| ||||||||||||||    
T  6720955 ttttttctacattaccctatcttgtttagagggtatttatccct-tcaagatatcaatcaatcaaaatgtaatataca 6720879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 27550636 - 27550677
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  27550636 ttaccctctcatgatatcaaccaatcaaaatgtaatatacat 27550677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 15524119 - 15524189
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||| | |||| |||||||| ||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  15524119 ctagattaccttctcttgtttagaggatattt-accctttcaagatatcaaccaatcaaaatgtaatataca 15524189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 34663635 - 34663569
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| ||||||||||  |||| || |||||||||||||||||||||||| ||||||| |||||||    
T  34663635 ttaccctctcttatttaggaggtaatt-accctctcatgatatcaaccaatcaaaatgtagtatacat 34663569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 7181259 - 7181206
Alignment:
Q  266 tttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||| ||||||    
T  7181259 tttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaacatacat 7181206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 29388962 - 29389028
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||||| ||||| || |||| |||||||  ||||||||||| ||| ||| |||||||||||||    
T  29388962 gttttttctacattactctctcttgtttagagaatattttaccctttcaagatttcaaccaatcaaa 29389028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 9987488 - 9987447
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  9987488 ttaccctatcatgatatcaaccaatcaaaatgtaatatacat 9987447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 3033069 - 3033132
Alignment:
Q  243 tttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||| |||||||| |||| ||||||||||| |||||||  |||  ||||||||||||||||    
T  3033069 tttttctacattaccctctcttgtttagagggta-tttaccccttcaaaatatcaaccaatcaaa 3033132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 13305635 - 13305579
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  13305635 ttaccttcccatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 13305579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 30755 - 30646
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat-caaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||  ||||    
T  30755 ttttttctagattaccctatcttatttagagggtattttaccctctcatgatatcaaccaataaaaatgtaatatacattgacaacattaaatgtcataa 30656  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  30655 atgagtcaat 30646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 20729 - 20796
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  20729 ttaccctatcttgtttagagggtaatttaccctcttatgatatcaaccaatcaaaatgtaatatacat 20796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 30823697 - 30823806
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||  ||||    
T  30823697 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgttatatacattgacaacattaaatgtcataa 30823796  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  30823797 atgagtcaat 30823806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 23417198 - 23417309
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  23417198 ggtttttgctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 23417297  T
Q  339 aaatgagtcaat 350  Q
    |||||| |||||    
T  23417298 aaatgattcaat 23417309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 54921450 - 54921339
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||  ||    
T  54921450 ggttttttctagattaccctctcttatttagagggtattttaccctctcataatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 54921351  T
Q  339 aaatgagtcaat 350  Q
    |||||| |||||    
T  54921350 aaatgaatcaat 54921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 41039571 - 41039681
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgcta 337  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  |    
T  41039571 gggttttttctagattaccctctcttatttagaaggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtca 41039670  T
Q  338 taaatgagtca 348  Q
    |||||||||||    
T  41039671 taaatgagtca 41039681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 8941301 - 8941192
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||||    
T  8941301 ttttttctagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataa 8941202  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  8941201 atgagtcaat 8941192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 20352026 - 20352137
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||| |  ||    
T  20352026 ggttttttctagattaccctctcttatttagagagtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaaggtcat 20352125  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  20352126 aaatgagtcaat 20352137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 46719763 - 46719653
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  46719763 ggttttttatagattaccctctcttatttagagggta-tttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 46719665  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  46719664 aaatgagtcaat 46719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 13530035 - 13530143
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||    
T  13530035 ttttttctagattaccctatcttgtttagagggtattt-accctctcatgatataaaccaatcaaaatgtaatatacattgacaacattaaatgtcataa 13530133  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  13530134 atgagtcaat 13530143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 52449410 - 52449305
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  52449410 ggttttttctagattaccctctgttatttagaagatattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 52449311  T
Q  339 aaatga 344  Q
    ||||||    
T  52449310 aaatga 52449305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 3033856 - 3033967
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||| ||||||| ||||||||| | | |||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||  ||    
T  3033856 ggttttttctagcttaccctctcttatttatatgatattttaccctctcatgatatcaaccaatcaaaatataatatacattgccaacattaaatgtcat 3033955  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  3033956 aaatgagtcaat 3033967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 43304920 - 43304810
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||  ||    
T  43304920 ggttttttttagattaccctctcttgtttagagggtattt-accctttcatgatatcaaccaatcaaaatgtaatatacatcgacaacattaaatgtcat 43304822  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  43304821 aaatgagtcaat 43304810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 9366912 - 9366994
Alignment:
Q  269 agagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||||    
T  9366912 agagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagtcaat 9366994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 16666732 - 16666624
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||||   ||||    
T  16666732 ttttttcaagattaccctctcttatttagaaggtattt-accctctcatgatatcaaccaatcaaaatgtaatatatattagcaacattaaatatcataa 16666634  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  16666633 atgagtcaat 16666624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 47805597 - 47805705
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||||    
T  47805597 ttttttctagattaccctatcttgtttagaggatattt-accctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcataa 47805695  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  47805696 atgagtcaat 47805705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 49875792 - 49875683
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||  | ||    
T  49875792 ttttttttagattaccctctcttgtttagagggtattttaccttctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcacaa 49875693  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  49875692 atgagtcaat 49875683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 7489334 - 7489267
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7489334 ggttttttctagattaccctctcttatttagagggtattttaccctttcatgatatcaaccaatcaaa 7489267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 23931593 - 23931699
Alignment:
Q  244 ttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaat 342  Q
    |||||||||||||||| |||| |||||||||||||| || |||| ||||||||||| ||||||| ||||||||||||| ||||||||||||   ||||||    
T  23931593 ttttctagattaccctctcttgtttagagggtattt-actctcttatgatatcaacaaatcaaaatgtaatatacattgacaacattaaatatcataaat 23931691  T
Q  343 gagtcaat 350  Q
    ||||||||    
T  23931692 gagtcaat 23931699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 34075036 - 34074926
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||||||||| || |||| |||| || ||||||  |||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||    
T  34075036 ggttttttctagattactctctcttgtttaaagtgtatttacccct-tcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcat 34074938  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  34074937 aaatgagtcaat 34074926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 4655040 - 4654979
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat 303  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  4655040 ttttttctagattaccctatcttgtttagagggtattttaccctctcatgatatcaaccaat 4654979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 28172149 - 28172257
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| || ||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| |||| |||||| |  ||||    
T  28172149 ttttttttaaattacactatcttatttagagggtattt-accctctcatgatatcaaccaatcaaaatgcaatatacattgacaatattaaacgtcataa 28172247  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  28172248 atgagtcaat 28172257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 17363110 - 17362999
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||| ||| ||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||    ||    
T  17363110 ggttgtttttagattaccctcttttatttaaaggatattttaccctctcatgatatcaatcaatcaaaatgtaatatacattgtcaacattaaaaatcat 17363011  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  17363010 aaatgagtcaat 17362999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 252 - 350
Target Start/End: Original strand, 27956538 - 27956636
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||| |||| | ||||| |||||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  27956538 attaccctctcttgtctagagtgtattt-accctctcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtcataaatgagtcaat 27956636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 4652798 - 4652866
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  4652798 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 4652866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 41041661 - 41041593
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  41041661 attaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 41041593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 55449481 - 55449549
Alignment:
Q  283 cctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||    
T  55449481 cctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgttataaatgagtcaat 55449549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 7487074 - 7487141
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  7487074 ttaccctctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacat 7487141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 35046287 - 35046180
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||| | ||| |||| ||||||||||||||  |||||  ||||||||||||||||||| ||||||||||||| |||| ||||||||  ||||    
T  35046287 ttttttttagatcatcctctcttgtttagagggtatttatccctc--atgatatcaaccaatcaaaatgtaatatacattgacaatattaaatgtcataa 35046190  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  35046189 atgagtcaat 35046180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 17518858 - 17518950
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||| |||| |||||| |||| ||||||||||||||||| ||  ||||| |||||||||||||||  |||||||||||||    
T  17518858 ttttttctagattaccctctcttgtttagacggta-tttaccctctcatgataccagtcaatcaaaatgtaatatacatcgacaacattaaatg 17518950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 20785168 - 20785240
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||  ||||||||||||||    
T  20785168 ttaccctctcatgatatcaaccaatcaaaatataatataaattgacaacattaaatgtcataaatgagtcaat 20785240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 346
Target Start/End: Original strand, 31289460 - 31289563
Alignment:
Q  243 tttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataaa 341  Q
    ||||| |||||||| || ||||||||||| ||||||| | |||||||||||||||||||| | ||||||||||||||||  | ||||||||||  |||||    
T  31289460 tttttttagattactctatcttatttagaaggtattt-atcctctcatgatatcaaccaattaaaatgtaatatacattggctacattaaatgtcataaa 31289558  T
Q  342 tgagt 346  Q
    |||||    
T  31289559 tgagt 31289563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 350
Target Start/End: Complemental strand, 42180267 - 42180180
Alignment:
Q  263 ttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    |||||||||||||||||  |||| ||||||||||||||||||||| |||||||||  || ||||||||||||  |||||||||||||||    
T  42180267 ttatttagagggtatttatccct-tcatgatatcaaccaatcaaaatgtaatatatgttgacaacattaaattttataaatgagtcaat 42180180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 23419524 - 23419457
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  23419524 ttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaatcaaaatgtaatatacat 23419457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 20787258 - 20787177
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  20787258 ttaccctctcttgtttagagg-taatttaccctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 20787177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 49970442 - 49970374
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||| | |||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  49970442 attaccttctcttgtttagagggtaatttaccctctcatgatatcaatcaatcaaaatgtaatatacat 49970374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 13534782 - 13534700
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||| |||| ||||||||||| || || ||||||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  13534782 attaccctctcttgtttagagggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 13534700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 20354292 - 20354226
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  20354292 ttaccctctcttgtttagagggtaatttacc-tctcatgatatcaaccaatcaaaatgtaatatacat 20354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 31292818 - 31292752
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  31292818 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacat 31292752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 34072866 - 34072932
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  34072866 ttaccctctcttgtttagagggtaatt-accctctcatgatatcaaccaatcaaaatgtaatatacat 34072932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 47649399 - 47649477
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||  ||| |||||||||||||| ||||||||||||||    
T  47649399 ggttttttctacattaccctatcttgtttagagggta-tttaccccttcaagatatcaaccaatcaaaatgtaatataca 47649477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 52447211 - 52447266
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  52447211 attatcctctcttatttagagggtaatttaccctctcatgatatcaatcaatcaaa 52447266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 7489416 - 7489375
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtatttta 281  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7489416 ggttttttctagattaccctctcttatttagagggtatttta 7489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 19869703 - 19869783
Alignment:
Q  236 tttgggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||||||||||| |||| ||| |||| |||| |||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  19869703 tttgggttttttctacattatcctctcttgtttatagggta-tttaccctttcaagatatcaaccaatcaaaatgtaatata 19869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 13861953 - 13861905
Alignment:
Q  286 ctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaat 333  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  13861953 ctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaat 13861905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 17360974 - 17361038
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatata 316  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||||||| | ||||||||||||    
T  17360974 ttaccctctcttgtttagagggtaatttaccatctcatgatatcaaccaattaaaatgtaatata 17361038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 7113930 - 7113852
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||  |||||||| |||| ||||||||||| |||||||  ||| |||||||||||||| ||||||||||||||    
T  7113930 ggttttttctgcattaccctctcttgtttagagggta-tttaccccttcaagatatcaaccaatcaaaatgtaatataca 7113852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 38623680 - 38623610
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||||||||| |||||||| ||| |||||||| ||||| ||||||||||||||    
T  38623680 ctagattaccctctcttgtttagagggta-tttaccctttcaagatatcaatcaatcaaaatgtaatataca 38623610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 43940456 - 43940379
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||||||| |||||||| |||| ||||||||||| |||||||  | | |||||||| ||||| ||||||||||||    
T  43940456 ggttttttctacattaccctctcttgtttagagggtaatttacccctttaagatatcaatcaatcaaaatgtaatata 43940379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 24577986 - 24577923
Alignment:
Q  243 tttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||||||| |||||||| |||| |||| ||||||||| ||||| ||| |||||||||||||||||    
T  24577986 tttttctacattaccctctcttgtttatagggtattt-accctttcaagatatcaaccaatcaaa 24577923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 26923890 - 26923811
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||||||| |||| |||||||| || ||||||   ||| |||||||||||||| ||||||||||||||    
T  26923890 gggttttttctacattaccctctcttgtttagaggata-tttaccacttcaagatatcaaccaatcaaaatgtaatataca 26923811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 31309420 - 31309479
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    |||| |||||||| |||| ||||| ||||| || |||||||||||||||||||||||||||    
T  31309420 tctacattaccctctcttgtttagggggtaatt-accctctcatgatatcaaccaatcaaa 31309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 10659234 - 10659169
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| ||||||| ||| |||||||| ||| |||||||||||||||||    
T  10659234 ggttttttctacattaccctctcttgtttagagagta-tttaccct-tcaagatatcaaccaatcaaa 10659169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 10873379 - 10873314
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| ||||||| ||| |||||||| ||| |||||||||||||||||    
T  10873379 ggttttttctacattaccctctcttgtttagagagta-tttaccct-tcaagatatcaaccaatcaaa 10873314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 14270173 - 14270096
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||  ||||||| |||| ||||| ||||| |||||||| ||| |||||||||||||| ||||||||||||||    
T  14270173 ggttttttctacgttaccctctcttgtttagggggta-tttaccct-tcaagatatcaaccaatcaaaatgtaatataca 14270096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 16664495 - 16664561
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||||| || || |||||||||||||||||||||||| ||||| |||||||||    
T  16664495 ttaccctctcttgtttagaggataatt-accctctcatgatatcaaccaatcaaaatgaaatatacat 16664561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 23933772 - 23933706
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || ||| |||||||||||||||||| | |||||||||||||||    
T  23933772 ttaccctatcttgtttagagggtaatt-accatctcatgatatcaaccaattaaaatgtaatatacat 23933706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 48952784 - 48952854
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||| | |||| ||||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  48952784 ctagattaccttctcttgtttagggggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 48952854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 49873561 - 49873627
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||| |||| || || ||||||||||||||||||||| |||||||||||||||    
T  49873561 ttaccctctcttttttagatggtaatt-actctctcatgatatcaaccaatcaaaatgtaatatacat 49873627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 19871300 - 19871232
Alignment:
Q  249 tagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||| ||||||||||| |||||||| |||  ||||||||||||| ||||||||||||||    
T  19871300 tagattaccctctcttgtttagagggta-tttaccctttca-aatatcaaccaatcaaaatgtaatataca 19871232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 35824336 - 35824417
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||| ||| || ||| ||||||||||| |||||||| ||||||||||||||| |  |||||||||||    
T  35824336 ttaccctctcttgtttagagagtaattaacc-tctcatgatataaaccaatcaaaatgtaatatacataagtaacattaaatg 35824417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 50496347 - 50496282
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||| |||| ||||| ||||| || ||||||| |||||||||||||||| ||||||||||||||    
T  50496347 ttaccctctcttgtttagggggtaatt-accctctaatgatatcaaccaatcaaaatgtaatataca 50496282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 7111062 - 7111126
Alignment:
Q  254 taccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||| |||| ||||||||||| |||||||| ||| ||||||||| |||| ||||||||||||||    
T  7111062 taccctctcttgtttagagggta-tttaccctttcaagatatcaactaatcaaaatgtaatataca 7111126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 8939267 - 8939308
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  8939267 ttaccctctcatgatatcaactaatcaaaatgtaatatacat 8939308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 31624747 - 31624675
Alignment:
Q  244 ttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||  ||||||| |||||||||||||||| |||||||| | | ||||| |||||||| ||||||||||||    
T  31624747 ttttctactttaccctctcttatttagagggta-tttacccttttaagatattaaccaatcaaaatgtaatata 31624675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 8081269 - 8081198
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatataca 318  Q
    ||||||||||||| |||| ||||| ||||| |||||| | ||| |||||||||||| | ||||||||||||||    
T  8081269 tctagattaccctctcttgtttagggggta-tttaccatttcaagatatcaaccaattaaaatgtaatataca 8081198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 17520147 - 17520084
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    ||||||| |||| ||||||||||| || | |||||||||||||||| ||||| ||||||||||||    
T  17520147 ttaccctctcttgtttagagggtaatt-atcctctcatgatatcaatcaatcaaaatgtaatata 17520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 26917639 - 26917710
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||||| |||| ||||  || ||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  26917639 tctagattaccctctcttgtttaagggatattt-accctttcaagatatcaaccaatcaaaatgtaatataca 26917710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 47650856 - 47650797
Alignment:
Q  247 tctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||||| |||||||||| ||||| |||||||| | | |||| ||||||||||||    
T  47650856 tctagattaccctatcttatttagggggta-tttacccttttaagatagcaaccaatcaaa 47650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 50792764 - 50792697
Alignment:
Q  251 gattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||| | |||| |||| ||||||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  50792764 gattaccttctcttgtttaaagggtattt-accctttcaagatatcaaccaatcaaaatgtaatataca 50792697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 56561 - 56450
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  56561 ggttttttctagattaccctctcttatttagagggtattttaccctcccatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 56462  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  56461 aaatgagtcaat 56450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 38280259 - 38280370
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||    
T  38280259 ggttttttctagattaccctattttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcat 38280358  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  38280359 aaatgagtcaat 38280370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 25225458 - 25225349
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||  ||||    
T  25225458 ttttttttagattaccctctcttatttagagggtattttaccctcttatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtcataa 25225359  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  25225358 atgagtcaat 25225349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 39965180 - 39965289
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||    
T  39965180 ttttttctggattaccctctcttatttagagggtattttattctctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcataa 39965279  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  39965280 atgagtcaat 39965289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 28389954 - 28390063
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||| |||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||||| |||||||| ||||  ||    
T  28389954 ggttttttttagattaccctctcttatttagagggtatttta--ctctcatgatattaaccaatcaaaatgtaatatacattgacaacattcaatgtcat 28390051  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  28390052 aaatgagtcaat 28390063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 2290386 - 2290495
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgt-aatatacattaacaacattaaatgctata 339  Q
    |||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||    
T  2290386 ttttttttagattaccctctcttgtttagagggtattt-accctctcatgatatcaaccaatcaaaatgtaaatatacattgacaacattaaatgtcata 2290484  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  2290485 aatgagtcaat 2290495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 15400992 - 15400883
Alignment:
Q  241 gttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctata 339  Q
    ||||||| |||||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  |||    
T  15400992 gttttttttagattactctatcttgtttagagggtattt-accctatcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgtcata 15400894  T
Q  340 aatgagtcaat 350  Q
    |||||||||||    
T  15400893 aatgagtcaat 15400883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 349
Target Start/End: Original strand, 75574 - 75682
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||  |||||||||||   ||||    
T  75574 ttttttctagattaccctcttttatttagagggtattttaccttcttatgatatcaaccaatcaaaatataatatacattggcaacattaaatatcataa 75673  T
Q  341 atgagtcaa 349  Q
    |||||||||    
T  75674 atgagtcaa 75682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 1053134 - 1053244
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||| |||  ||||||||||||  ||    
T  1053134 ggttttttctagattactctctcttgtttagagggta-tttaccctctcatgatatcaacaaatcaaaatgtaatatatattggcaacattaaatgtcat 1053232  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  1053233 aaatgagtcaat 1053244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 243 - 350
Target Start/End: Original strand, 3849795 - 3849903
Alignment:
Q  243 tttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgct-ataa 340  Q
    ||||||||||||||||| |||| |||| ||||||||| |  |||||||||||||||||||||||| ||||||||||||| ||||||||||||| | ||||    
T  3849795 tttttctagattaccctctcttgtttaaagggtattt-atactctcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatgttaataa 3849893  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  3849894 atgagtcaat 3849903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 3904919 - 3904982
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat 303  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3904919 ggttttttttagattaccctctcttatttagagggtattttaccctctcatgatatcaaccaat 3904982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 303
Target Start/End: Original strand, 14004023 - 14004086
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaat 303  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14004023 ggttttttttagattaccctctcttatttagagggtattttaccgtctcatgatatcaaccaat 14004086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 39067041 - 39067151
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctat 338  Q
    |||||||| ||||||||||  |||||||||||||||| |||| |||||||||||||||| ||| | |||||||||||||||| | |||||||||||  ||    
T  39067041 ggttttttttagattacccaatcttatttagagggta-tttatcctctcatgatatcaatcaattaaaatgtaatatacattgataacattaaatgtcat 39067139  T
Q  339 aaatgagtcaat 350  Q
    |||| |||||||    
T  39067140 aaataagtcaat 39067151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 7575696 - 7575603
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    ||||||||||| |||||||| |||| ||||| ||||||||   ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  7575696 ggttttttctacattaccctctcttgtttagggggtattta--cctttcatgatatcaaccaatcaaaatgtaatatacattgacaacattaaatg 7575603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 3907106 - 3907023
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||| || |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |  |||||||||||    
T  3907106 attacactctcttgtttagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 3907023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 21191922 - 21191855
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||    
T  21191922 ggttttttctacattaccctctcttgtttagagggtattttaccctttcaagatatcaaccaatcaaa 21191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 15154544 - 15154472
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||  ||||||||||||||    
T  15154544 ttaccctatcatgatatcaaccaatcaaaatgtaatatatattgacaacattaaatgtcataaatgagtcaat 15154472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 350
Target Start/End: Original strand, 42078858 - 42078967
Alignment:
Q  239 gggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgct- 336  Q
    |||||||| |||||||||| | ||||||||||  |||||||     |||||||||||||||||||| ||||||||||||||||  |||||||||||| |     
T  42078858 gggtttttactagattaccttctcttatttaggaggtattta----tctcatgatatcaaccaatcaaaatgtaatatacattggcaacattaaatgtta 42078953  T
Q  337 ataaatgagtcaat 350  Q
    ||||||||||||||    
T  42078954 ataaatgagtcaat 42078967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 4736713 - 4736820
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaa-tcaaatgtaatatacattaacaacattaaatgctataa 340  Q
    |||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||||||||| | ||||| |||||| |||   ||||||||||   ||||    
T  4736713 ttttttttagattaccctctcttgtt--gagggtattttaccctctcatgatatcaaccaattaaaatgcaatatatattgcaaacattaaatatcataa 4736810  T
Q  341 atgagtcaat 350  Q
    ||||||||||    
T  4736811 atgagtcaat 4736820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 14006251 - 14006186
Alignment:
Q  252 attaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatata 316  Q
    |||||||| |||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  14006251 attaccctctcttgttaagagggtaatttaccctctcatgatatcaaccaatcaaaatgtaatata 14006186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 3753008 - 3753097
Alignment:
Q  244 ttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatca-aatgtaatatacattaacaacattaaatg 334  Q
    |||| ||||||||||| || | ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  3753008 ttttttagattaccctctcctgtttag-gggtattt-accctctcatgatatcaaccaatcataatgtaatatacattggcaacattgaatg 3753097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 38282463 - 38282396
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||    
T  38282463 ttaccctctcttgtttagagggtaatttatcctctcatgatatcaatcaatcaaaatgtaatatacat 38282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 77799 - 77717
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| |||||| |||| |||| ||||||||||||||||| |||| |||||||||||||||  | |||||||||||    
T  77799 ttaccctctcttgtttagaaggtaatttatcctctcatgatatcaacgaatcaaaatgtaatatacatagataacattaaatg 77717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 25761195 - 25761261
Alignment:
Q  285 tctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||||||||||||||||||| | |||||||||||  ||||||||||||  ||||||||||||||    
T  25761195 tctcatgatatcaaccaatcaaaatataatatacattggcaacattaaatgtcataaatgagtcaat 25761261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 27551797 - 27551716
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| |  |||||||||||    
T  27551797 ttaccctctcttgtttagagggtaatt-accctctcctgatatcaaccaatcaaaatgtaatatacataagtaacattaaatg 27551716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 39773299 - 39773368
Alignment:
Q  278 tttaccctctcatgatatcaaccaatcaaatgtaatatacattaacaacattaaatg-ctataaatgagtcaat 350  Q
    |||||||||||||||||||||    ||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  39773299 tttaccctctcatgatatcaa----tcaaatgtaatatacattggcaacattaaatgtcaataaatgagtcaat 39773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 4738463 - 4738382
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    ||||||| |||| ||||||||||| || ||||||| ||||||| |||||||| |||||||||||||||  | |||||||||||    
T  4738463 ttaccctatcttgtttagagggtaatt-accctcttatgatatgaaccaatcaaaatgtaatatacatagataacattaaatg 4738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 24457845 - 24457921
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaa-atgtaatataca 318  Q
    ||||||||| |||||||| |||| ||||||||||| |||||||  ||| ||||| |||||||||| ||||||||||||    
T  24457845 ttttttctacattaccctctcttgtttagagggta-tttaccccttcaagatattaaccaatcaagatgtaatataca 24457921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 38932585 - 38932509
Alignment:
Q  242 ttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||| |||||||| |||| ||||||||||| ||||| |  ||| |||||||||||||| ||||||||||||||    
T  38932585 ttttttctacattaccctctcttgtttagagggta-tttactccttcaagatatcaaccaatcaaaatgtaatataca 38932509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 6644575 - 6644631
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatg 334  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  6644575 ttaccttctcatgatattaaccaatcaaaatgtaatatacatagacaacattaaatg 6644631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 37726118 - 37726053
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||  |||||||| ||||||||||||||| |||| |||||||||||||||    
T  37726118 ttaccctctcttgtttagagg--attttaccttctcatgatatcaacaaatcaaaatgtaatatacat 37726053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 15152384 - 15152450
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| || || ||||||| ||||||||||||| |||||||||||||||    
T  15152384 ttaccctctcttgtttagagggtaatt-actctctcataatatcaaccaatcaaaatgtaatatacat 15152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 25223330 - 25223388
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||| ||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||    
T  25223330 tcttgtttagagggtaatttacc-tctcatgatattaaccaatcaaaatgtaatatacat 25223388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 28392002 - 28391936
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| |||||||| || || |||||||||||||||||| ||||| |||||||||||||||    
T  28392002 ttaccctctcttgtttagaggataatt-accctctcatgatatcaatcaatcaaaatgtaatatacat 28391936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 36603081 - 36603003
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||| |  ||| |||||||||||||| ||||||||||||||    
T  36603081 ggttttttctacattaccctctcttatttaaaaggta-tttactccttcaagatatcaaccaatcaaaatgtaatataca 36603003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 39159852 - 39159922
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||||| ||| |||||||| | | |||||||||||||| ||||||||||||||    
T  39159852 ctagattaccctctcttgtttagagagta-tttacccttttaagatatcaaccaatcaaaatgtaatataca 39159922  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 39209342 - 39209272
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatataca 318  Q
    |||||||||||| |||| ||||||| ||| |||||||| | | |||||||||||||| ||||||||||||||    
T  39209342 ctagattaccctctcttgtttagagagta-tttacccttttaagatatcaaccaatcaaaatgtaatataca 39209272  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 2292534 - 2292461
Alignment:
Q  261 tcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||| ||||||||||| || || |||||||||||| |||||||| ||||||||||||||| |  |||||||||||    
T  2292534 tcttgtttagagggtaatt-actctctcatgatataaaccaatcaaaatgtaatatacataagtaacattaaatg 2292461  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 3851875 - 3851822
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa 307  Q
    ||||||| |||||||||| ||||| || | |||||||||||||||||||||||||    
T  3851875 ttaccctatcttatttagggggtaatt-agcctctcatgatatcaaccaatcaaa 3851822  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 15398834 - 15398883
Alignment:
Q  266 tttagagggtattttaccctctcatgatatcaaccaatcaaatgtaatata 316  Q
    ||||||||||| || ||||||||||||||||||||||  ||||||||||||    
T  15398834 tttagagggtaatt-accctctcatgatatcaaccaacaaaatgtaatata 15398883  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 27549725 - 27549787
Alignment:
Q  289 atgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctataaatgagtcaat 350  Q
    ||||||||||| ||||||| ||||||||||||  | |||||||||||  ||||||||||||||    
T  27549725 atgatatcaactaatcaaaatgtaatatacatcgaaaacattaaatgtcataaatgagtcaat 27549787  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 42080923 - 42080882
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  42080923 ttaccctttcatgatatcaaccaatcaaaatgtaatatacat 42080882  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 3767930 - 3767890
Alignment:
Q  279 ttaccctctcatgatatcaaccaatcaaa-tgtaatataca 318  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  3767930 ttactctctcatgatatcaaccaatcaaagtgtaatataca 3767890  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 14454703 - 14454632
Alignment:
Q  248 ctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    |||||||||||| | || || || |||||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  14454703 ctagattaccctcttttgttcagggggtattt-accctttcaagatatcaaccaatcaaaatgtaatatacat 14454632  T

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Target: scaffold0779 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 217 - 110
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatgctat 338  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||  ||    
T  217 ggttttttctatattaccctctcttatttagagggtattttaccctctcatgatatcaaccaatcaaaatgtaatatatattggcaacattaaatgtcat 118  T
Q  339 aaatgagt 346  Q
    ||||||||    
T  117 aaatgagt 110  T

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Target: scaffold0208 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 3860 - 3970
Alignment:
Q  240 ggttttttctagattaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatcaaa-tgtaatatacattaacaacattaaatgctat 338  Q
    |||||||||||||||||||| |||| ||||||||||||||  |||| |||||||||||| |||||||| ||||||||||||| |||||||||||||  ||    
T  3860 ggttttttctagattaccctctcttgtttagagggtatttacccct-tcatgatatcaatcaatcaaaatgtaatatacattgacaacattaaatgtcat 3958  T
Q  339 aaatgagtcaat 350  Q
    ||||||||||||    
T  3959 aaatgagtcaat 3970  T

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Target: scaffold0208; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 5915 - 5874
Alignment:
Q  279 ttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  5915 ttaccctcttatgatatcaaccaatcaaaatgtaatatacat 5874  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 49144 - 49077
Alignment:
Q  253 ttaccctgtcttatttagagggtattttaccctctcatgatatcaaccaatc-aaatgtaatatacat 319  Q
    ||||||| |||| ||||||||||| |||| | |||||||||||||||||||| |||||||||||||||    
T  49144 ttaccctctcttgtttagagggtaatttatcttctcatgatatcaaccaatcaaaatgtaatatacat 49077  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 6182 - 6130
Alignment:
Q  283 cctctcatgatatcaaccaatc-aaatgtaatatacattaacaacattaaatg 334  Q
    |||||||||||||||||||||| |||| ||||||||||   ||||||||||||    
T  6182 cctctcatgatatcaaccaatcaaaatttaatatacataggcaacattaaatg 6130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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