View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18188_high_10 (Length: 242)
Name: NF18188_high_10
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18188_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 5051025 - 5051247
Alignment:
| Q |
1 |
actttactaaaaccaaagctagatcagatttctttcacacactccttttgaagatatttcttatacatacataatcctgcattttgtttgctgtgatttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5051025 |
actttactaaaaccaaagctagatcagatttctttcacacactccttttgaagatatttcttatacatacataatcctgcattttgtttgctgtgatttc |
5051124 |
T |
|
| Q |
101 |
ttacaaactaagcaacaaatggccactagtacgaacgaaacactctcaacttatgtgaaggtgtcgctagatatgattgtttctagtcatgagttcatgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||| ||||| |||||||| |
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| T |
5051125 |
ttacaaactaagcaacaaatggccactagtacgaacgaaacactctcaactcatgtgaaggtgttgctagacaaaattgtttctaatcatgggttcatgg |
5051224 |
T |
|
| Q |
201 |
acaacttccggaccactaagctt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
5051225 |
acaacttccggaccactaagctt |
5051247 |
T |
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