View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18188_high_7 (Length: 267)
Name: NF18188_high_7
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18188_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 12269132 - 12268867
Alignment:
| Q |
1 |
aaagtatgaataccattattcaattaatacattcctcataacatttttcgtagcaaaaataataattcacgaggtttgtgactgattctagtgacttaaa |
100 |
Q |
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| T |
12269132 |
aaagtatgaataccattattcaattaatacaatcctcataacatttttcgtagcaaaaataataattctcgaggtttgtgactgattctagtgacttaaa |
12269033 |
T |
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| Q |
101 |
acatgatggtatatatttgtgatatttcaatggattcaaacacctagcacgacacgtaatatgcggnnnnnnnnnnnccatttggctcaattacttgtga |
200 |
Q |
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| T |
12269032 |
acatgatggtatatatttgtgatatttcaatggattcaaacacctagcacgacacgtaatatgcgg-aaaaaaaaaaccatttggctcaattacttgtga |
12268934 |
T |
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| Q |
201 |
ttgaagtaaatcacgagcatgagttacgactagcataatctttaacatcatcacaacgcattgtttt |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
12268933 |
ttgaagtaaatcacgagcatgagttacgactagcataatcattaacatcatcacaacgcattgtttt |
12268867 |
T |
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