View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18188_low_17 (Length: 228)

Name: NF18188_low_17
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18188_low_17
NF18188_low_17
[»] chr6 (24 HSPs)
chr6 (1-217)||(32518341-32518557)
chr6 (28-217)||(18644948-18645137)
chr6 (1-217)||(3480501-3480717)
chr6 (1-212)||(32454277-32454488)
chr6 (18-216)||(9399880-9400078)
chr6 (22-217)||(11357040-11357233)
chr6 (55-217)||(32437210-32437372)
chr6 (18-217)||(20525178-20525377)
chr6 (22-216)||(6902743-6902936)
chr6 (27-216)||(21068680-21068869)
chr6 (22-217)||(13610740-13610925)
chr6 (27-198)||(33267116-33267287)
chr6 (35-216)||(21091157-21091338)
chr6 (28-216)||(7051090-7051278)
chr6 (27-216)||(21045365-21045554)
chr6 (28-216)||(10569764-10569952)
chr6 (22-182)||(7371225-7371385)
chr6 (27-169)||(14337721-14337862)
chr6 (1-91)||(3456777-3456867)
chr6 (1-61)||(13613617-13613677)
chr6 (170-217)||(18644914-18644961)
chr6 (170-217)||(32518307-32518354)
chr6 (1-91)||(32455896-32455986)
chr6 (25-91)||(33276854-33276917)
[»] chr8 (46 HSPs)
chr8 (1-217)||(13106833-13107049)
chr8 (1-217)||(13283839-13284055)
chr8 (1-217)||(27692681-27692897)
chr8 (1-217)||(38548675-38548891)
chr8 (1-217)||(8608266-8608483)
chr8 (1-217)||(29239031-29239247)
chr8 (1-217)||(33707235-33707451)
chr8 (1-217)||(33761098-33761314)
chr8 (1-217)||(35510663-35510879)
chr8 (4-217)||(42943270-42943483)
chr8 (1-217)||(29237180-29237396)
chr8 (1-217)||(601548-601764)
chr8 (1-217)||(35509243-35509459)
chr8 (1-217)||(33762561-33762773)
chr8 (28-217)||(22273735-22273924)
chr8 (1-218)||(27404239-27404456)
chr8 (1-217)||(15308105-15308321)
chr8 (1-217)||(15488474-15488690)
chr8 (22-216)||(26238776-26238970)
chr8 (28-209)||(5037916-5038095)
chr8 (23-216)||(43261984-43262175)
chr8 (15-216)||(41823933-41824134)
chr8 (50-186)||(41040798-41040934)
chr8 (47-216)||(3152032-3152201)
chr8 (4-182)||(13484577-13484754)
chr8 (26-122)||(15562478-15562573)
chr8 (27-173)||(17807074-17807220)
chr8 (1-61)||(27691183-27691243)
chr8 (30-170)||(29694208-29694348)
chr8 (15-91)||(33708829-33708905)
chr8 (28-91)||(9672033-9672096)
chr8 (22-61)||(13108391-13108430)
chr8 (170-216)||(27692648-27692694)
chr8 (28-61)||(38547284-38547317)
chr8 (170-217)||(601514-601561)
chr8 (50-129)||(11719525-11719604)
chr8 (170-217)||(29238997-29239044)
chr8 (170-217)||(33761301-33761348)
chr8 (170-217)||(33762527-33762574)
chr8 (170-217)||(35509446-35509493)
chr8 (170-217)||(35510629-35510676)
chr8 (22-92)||(9186616-9186686)
chr8 (4-61)||(8609842-8609899)
chr8 (35-120)||(12515147-12515232)
chr8 (4-61)||(13282510-13282567)
chr8 (188-217)||(27404460-27404489)
[»] chr3 (53 HSPs)
chr3 (1-217)||(7883357-7883573)
chr3 (1-217)||(35903854-35904070)
chr3 (1-217)||(41979196-41979412)
chr3 (1-217)||(46308836-46309052)
chr3 (1-217)||(38193354-38193570)
chr3 (1-217)||(46310280-46310496)
chr3 (1-217)||(53092652-53092868)
chr3 (1-217)||(53094117-53094333)
chr3 (1-217)||(54899918-54900134)
chr3 (1-218)||(44795733-44795950)
chr3 (1-217)||(3150281-3150497)
chr3 (1-217)||(46609178-46609394)
chr3 (1-217)||(53187771-53187987)
chr3 (1-217)||(2661752-2661968)
chr3 (15-217)||(46611147-46611349)
chr3 (1-217)||(28626440-28626656)
chr3 (15-217)||(2378827-2379029)
chr3 (28-218)||(21350448-21350638)
chr3 (28-217)||(54412391-54412580)
chr3 (22-217)||(611066-611261)
chr3 (1-213)||(38191924-38192124)
chr3 (22-216)||(51686239-51686433)
chr3 (28-217)||(17516817-17517006)
chr3 (4-217)||(23291602-23291814)
chr3 (18-219)||(43766889-43767090)
chr3 (28-217)||(46113949-46114138)
chr3 (28-216)||(42282318-42282506)
chr3 (47-217)||(27897225-27897395)
chr3 (4-217)||(44268013-44268226)
chr3 (11-215)||(48829396-48829599)
chr3 (22-217)||(30598387-30598582)
chr3 (1-61)||(3152273-3152333)
chr3 (5-61)||(44794240-44794296)
chr3 (1-61)||(2660241-2660301)
chr3 (15-91)||(19987619-19987695)
chr3 (170-217)||(2661718-2661765)
chr3 (170-217)||(3150484-3150531)
chr3 (170-217)||(53187974-53188021)
chr3 (58-116)||(24846491-24846548)
chr3 (171-217)||(53092856-53092902)
chr3 (170-217)||(28626643-28626690)
chr3 (22-77)||(33051451-33051506)
chr3 (170-217)||(38193320-38193367)
chr3 (22-61)||(41977800-41977839)
chr3 (170-217)||(44795700-44795747)
chr3 (170-217)||(46309039-46309086)
chr3 (170-217)||(46310246-46310293)
chr3 (170-217)||(46609381-46609428)
chr3 (170-217)||(53094083-53094130)
chr3 (4-61)||(2226207-2226264)
chr3 (18-59)||(18430308-18430349)
chr3 (4-61)||(53190814-53190871)
chr3 (35-91)||(40963370-40963426)
[»] chr1 (42 HSPs)
chr1 (1-217)||(37345806-37346022)
chr1 (1-217)||(25276771-25276987)
chr1 (1-217)||(26223616-26223832)
chr1 (1-217)||(46582039-46582255)
chr1 (1-217)||(27089123-27089339)
chr1 (1-217)||(34776598-34776814)
chr1 (1-217)||(4854439-4854655)
chr1 (1-217)||(8169412-8169628)
chr1 (1-217)||(8167971-8168186)
chr1 (1-217)||(1444025-1444241)
chr1 (28-217)||(33599274-33599463)
chr1 (1-217)||(9120068-9120284)
chr1 (1-217)||(47011485-47011701)
chr1 (45-217)||(45044993-45045165)
chr1 (4-217)||(2870920-2871133)
chr1 (22-213)||(31236869-31237060)
chr1 (28-217)||(3011911-3012100)
chr1 (28-217)||(51894623-51894812)
chr1 (22-217)||(50554213-50554408)
chr1 (22-216)||(52641938-52642132)
chr1 (28-151)||(23577692-23577815)
chr1 (28-216)||(37087981-37088169)
chr1 (42-182)||(6816906-6817047)
chr1 (138-217)||(20944934-20945013)
chr1 (1-91)||(9121673-9121763)
chr1 (1-91)||(47013087-47013177)
chr1 (55-169)||(3369513-3369627)
chr1 (1-61)||(33602679-33602739)
chr1 (1-61)||(46583591-46583651)
chr1 (22-61)||(4856001-4856040)
chr1 (22-61)||(34778173-34778212)
chr1 (170-217)||(37345772-37345819)
chr1 (171-217)||(27089089-27089135)
chr1 (27-77)||(51123541-51123591)
chr1 (170-217)||(8168173-8168220)
chr1 (170-217)||(8169378-8169425)
chr1 (170-217)||(25276974-25277021)
chr1 (170-217)||(25277008-25277055)
chr1 (19-61)||(18183978-18184020)
chr1 (19-61)||(42134529-42134571)
chr1 (28-77)||(6577091-6577140)
chr1 (24-61)||(25278988-25279025)
[»] chr4 (43 HSPs)
chr4 (1-217)||(43507196-43507412)
chr4 (1-217)||(51013730-51013946)
chr4 (1-217)||(4173584-4173800)
chr4 (1-217)||(43508497-43508713)
chr4 (1-217)||(33265854-33266070)
chr4 (1-217)||(319302-319518)
chr4 (1-217)||(320744-320960)
chr4 (28-217)||(43520953-43521142)
chr4 (1-217)||(33264411-33264628)
chr4 (1-217)||(5437840-5438056)
chr4 (1-217)||(5439491-5439707)
chr4 (1-217)||(833252-833468)
chr4 (28-217)||(20493883-20494072)
chr4 (4-217)||(35401781-35401994)
chr4 (1-217)||(834886-835102)
chr4 (22-217)||(49524577-49524772)
chr4 (4-213)||(39345596-39345805)
chr4 (15-162)||(4169729-4169876)
chr4 (28-216)||(54387728-54387915)
chr4 (28-216)||(48645311-48645499)
chr4 (22-186)||(42982327-42982491)
chr4 (25-182)||(11254172-11254328)
chr4 (24-124)||(20820037-20820137)
chr4 (27-129)||(2691428-2691530)
chr4 (58-123)||(41759492-41759557)
chr4 (159-217)||(4172299-4172357)
chr4 (1-91)||(43519453-43519543)
chr4 (170-217)||(43520919-43520966)
chr4 (170-217)||(320710-320757)
chr4 (170-217)||(833455-833502)
chr4 (170-217)||(834852-834899)
chr4 (170-217)||(4173550-4173597)
chr4 (170-217)||(5438043-5438090)
chr4 (18-61)||(5486054-5486097)
chr4 (170-217)||(33264615-33264662)
chr4 (170-217)||(33265820-33265867)
chr4 (170-217)||(43507399-43507446)
chr4 (170-217)||(43508463-43508510)
chr4 (18-61)||(44558528-44558571)
chr4 (188-218)||(319523-319553)
chr4 (72-122)||(11642015-11642065)
chr4 (35-168)||(26397819-26397952)
chr4 (4-61)||(41761781-41761838)
[»] chr2 (26 HSPs)
chr2 (1-217)||(16764456-16764671)
chr2 (1-217)||(14387378-14387594)
chr2 (1-217)||(24205627-24205843)
chr2 (1-217)||(40561722-40561938)
chr2 (1-217)||(2577324-2577540)
chr2 (1-217)||(37022029-37022245)
chr2 (15-194)||(6783407-6783586)
chr2 (22-217)||(19906732-19906927)
chr2 (22-217)||(39663204-39663397)
chr2 (28-217)||(39456624-39456813)
chr2 (29-217)||(42517614-42517802)
chr2 (22-217)||(16376786-16376981)
chr2 (22-216)||(19581464-19581658)
chr2 (28-217)||(6799251-6799441)
chr2 (50-217)||(17697953-17698120)
chr2 (4-217)||(34400346-34400553)
chr2 (27-173)||(37646366-37646512)
chr2 (27-168)||(31474972-31475114)
chr2 (27-169)||(161967-162109)
chr2 (1-91)||(24208067-24208157)
chr2 (1-91)||(6786006-6786096)
chr2 (170-217)||(6783587-6783634)
chr2 (4-91)||(14389109-14389196)
chr2 (170-217)||(16764422-16764469)
chr2 (170-217)||(24205830-24205877)
chr2 (18-61)||(37417319-37417362)
[»] chr5 (32 HSPs)
chr5 (4-217)||(7269290-7269503)
chr5 (1-217)||(17577779-17577995)
chr5 (1-217)||(40782055-40782271)
chr5 (1-217)||(29620167-29620383)
chr5 (28-218)||(28813608-28813798)
chr5 (28-217)||(21842836-21843025)
chr5 (15-196)||(2852929-2853110)
chr5 (28-217)||(12738580-12738769)
chr5 (28-217)||(12801403-12801592)
chr5 (1-217)||(42471577-42471793)
chr5 (4-207)||(8541125-8541328)
chr5 (22-217)||(30463950-30464145)
chr5 (22-205)||(28821946-28822129)
chr5 (28-218)||(32134287-32134482)
chr5 (28-211)||(34328674-34328860)
chr5 (27-173)||(41493899-41494045)
chr5 (143-217)||(24539933-24540007)
chr5 (51-157)||(27077371-27077477)
chr5 (1-61)||(24541247-24541307)
chr5 (1-91)||(29621786-29621876)
chr5 (1-91)||(40780579-40780669)
chr5 (170-217)||(17577745-17577792)
chr5 (170-217)||(24539994-24540041)
chr5 (65-122)||(19998381-19998438)
chr5 (1-61)||(42473642-42473702)
chr5 (28-91)||(1344786-1344849)
chr5 (166-217)||(2181540-2181591)
chr5 (18-61)||(43492133-43492176)
chr5 (171-217)||(21842802-21842848)
chr5 (19-61)||(43318095-43318137)
chr5 (4-61)||(17574350-17574407)
chr5 (1-61)||(2854362-2854421)
[»] chr7 (38 HSPs)
chr7 (4-217)||(35403463-35403676)
chr7 (1-217)||(20479563-20479779)
chr7 (1-217)||(35401998-35402214)
chr7 (1-199)||(27664459-27664657)
chr7 (1-217)||(77858-78074)
chr7 (22-214)||(13169530-13169722)
chr7 (50-217)||(29994955-29995122)
chr7 (18-217)||(37113987-37114186)
chr7 (22-217)||(39857695-39857890)
chr7 (28-216)||(47384350-47384538)
chr7 (25-217)||(35691480-35691672)
chr7 (28-217)||(6605241-6605430)
chr7 (28-217)||(24226637-24226826)
chr7 (28-217)||(34775054-34775243)
chr7 (28-182)||(48227820-48227974)
chr7 (47-182)||(45361155-45361290)
chr7 (28-170)||(46437163-46437305)
chr7 (18-216)||(37791700-37791898)
chr7 (22-167)||(13039536-13039681)
chr7 (28-217)||(22211617-22211795)
chr7 (28-213)||(22155706-22155880)
chr7 (28-218)||(23904639-23904842)
chr7 (81-217)||(38472369-38472505)
chr7 (22-139)||(38549597-38549714)
chr7 (1-61)||(56359-56419)
chr7 (1-91)||(27666070-27666160)
chr7 (18-122)||(48311672-48311776)
chr7 (1-91)||(20478071-20478161)
chr7 (170-217)||(29995109-29995156)
chr7 (35-120)||(34785055-34785140)
chr7 (1-61)||(29996549-29996609)
chr7 (18-61)||(2167525-2167568)
chr7 (18-61)||(33038832-33038875)
chr7 (170-217)||(35403429-35403476)
chr7 (18-61)||(38613516-38613559)
chr7 (162-217)||(46437825-46437880)
chr7 (18-61)||(47341721-47341764)
chr7 (21-61)||(6602384-6602424)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-217)||(54102-54318)
[»] scaffold1712 (1 HSPs)
scaffold1712 (1-217)||(1011-1227)
[»] scaffold0345 (1 HSPs)
scaffold0345 (22-217)||(1401-1594)
[»] scaffold0058 (5 HSPs)
scaffold0058 (81-217)||(7081-7217)
scaffold0058 (1-111)||(14293-14403)
scaffold0058 (1-61)||(3323-3383)
scaffold0058 (1-61)||(4495-4555)
scaffold0058 (170-217)||(7047-7094)
[»] scaffold0004 (1 HSPs)
scaffold0004 (28-216)||(106724-106903)
[»] scaffold0001 (1 HSPs)
scaffold0001 (47-165)||(63617-63735)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 6e-98; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 32518557 - 32518341
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32518557 ttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 32518458  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  32518457 ctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 32518358  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  32518357 caaggaccaaattgatg 32518341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 18645137 - 18644948
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18645137 aattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgtaacgtt 18645038  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18645037 aacctctgacaaaacttaccacgttagatgtcacgcaagcagggaccaaactgatcgatttacacaaaatttccaaggaccaaattgatg 18644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 3480717 - 3480501
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  3480717 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 3480618  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  3480617 ctgttaacggaggtgacgtgtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 3480518  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  3480517 gaaggacgaaattgatg 3480501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 32454277 - 32454488
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||| | |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  32454277 ttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 32454376  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  32454377 ctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcagagaccaaactgattgatttacacaaaatttc 32454476  T
Q  201 caaggaccaaat 212  Q
     |||||| ||||    
T  32454477 gaaggacgaaat 32454488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 9400078 - 9399880
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    ||||||| | |||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  9400078 ttcatccttgaattttgcgaaatatctaattagtccccgaatttacaaaatatcaatcaaatcagtctctccgttaagttggtctgttaacagaggtgac 9399979  T
Q  118 gtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||| || |||||||| |||| ||||||  |||||| |||||||||    
T  9399978 gtgtaacgttaacctcttacaaggcttaccacgttagatgccacgcaagcagggacctaattgattgatttacagaaaattgtcaaggatcaaattgat 9399880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 11357233 - 11357040
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||  ||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  11357233 tccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgt 11357136  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||| ||||||||||| ||||||||||||||||| ||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  11357135 aacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 11357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 32437210 - 32437372
Alignment:
Q  55 tgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttag 154  Q
    |||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  32437210 tgaatttacaaaatgccaatcaaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcag 32437309  T
Q  155 atgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||  |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  32437310 ataccacgcaagcagggaccaaactgattgatttacacaacatttccgaggaccaaattgatg 32437372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 20525377 - 20525178
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    ||||||||| |||||||| ||||| | | || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20525377 ttcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 20525278  T
Q  118 gtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
     || ||||||||| ||| |||| ||||||||||| ||||| ||| ||||||||||||||| |||||||| |||| || ||| |||| |||||||||||||    
T  20525277 atgcaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgattgatttacagaacattgccaatgaccaaattgatg 20525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 6902936 - 6902743
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||||||||||||||| |||| | |||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6902936 tccctaaattttgcgaa-tatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 6902838  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    | ||||||| ||| ||||  |||||||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||  ||||||| ||||||||    
T  6902837 accgttaacctcttacaagacttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattgat 6902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 21068680 - 21068869
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||| ||||||||| | |||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||    
T  21068680 aaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgt 21068779  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    |||  ||| |||| ||||||||||| |||| ||||||||||| |||||||| |||||||| || | |||||| |||||||||||||||||    
T  21068780 taatctcttacaaggcttaccacgtcagatatcacgcaagcaaggaccaaattgattgatttatagaaaattgccaaggaccaaattgat 21068869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 13610740 - 13610925
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13610740 tccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 13610838  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||  || |||| ||||||||||| ||||| ||||||| |    ||||     |||||| |||| |||||||||||||||||||||||||    
T  13610839 aacgttaaccccttacaaggcttaccacgtcagatgacacgcaaac----acca-----attgatttacaaaaaatttccaaggaccaaattgatg 13610925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 33267116 - 33267287
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||||||||||||| | ||||| || ||||||| ||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||  ||    
T  33267116 aaattttgcgaaatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttccgttaaattggcctgttaacggaggtgacgtgtagtgt 33267215  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatt 198  Q
    |||| ||| |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||    
T  33267216 taacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaaaatt 33267287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 21091157 - 21091338
Alignment:
Q  35 cgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatct 134  Q
    ||||||||| | |||||||| ||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||||  |||    
T  21091157 cgaaatatctatttagtccccgaatttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctct 21091256  T
Q  135 gacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
     |||| ||||||||||| |||||||||||||||| |||| ||| |||||||| || | ||||||  ||||||||||||||||    
T  21091257 tacaaggcttaccacgtcagatgtcacgcaagcatggactaaattgattgatttatagaaaattgtcaaggaccaaattgat 21091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 7051278 - 7051090
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | ||||| |  ||||||| ||||| |  |  |||| ||||||||| ||||||||||||||||||||||||||||||||  |||    
T  7051278 aattttgcgaaatatctatttagtactcgaatttataaaatatccactaaattagtccctccattaagttggtctgttaacggaggtgacgtgtactgtt 7051179  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||| ||||||| |||||||||    
T  7051178 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaacaaattgat 7051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 21045365 - 21045554
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||| ||||||||| | |||||||| ||||||||||||||| |||||||||||||| ||||||||||| | ||| ||| ||||||||||||||  ||    
T  21045365 aaattttacgaaatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtgacgtgtactgt 21045464  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    |||  ||| |||| ||||||||||| |||| |||||||||||||||||||| |||||||| ||   ||||||  ||||||||||||||||    
T  21045465 taatctcttacaaggcttaccacgtcagatatcacgcaagcagggaccaaattgattgatttattaaaaattgtcaaggaccaaattgat 21045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 10569952 - 10569764
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||||| | |||||||  |||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||  |||    
T  10569952 aattttgcaaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgtcaaattggtctgttaacggaggtgacgtgtactgtt 10569853  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| ||   |||||||| || ||||| |||||||||||||| |||| |||||||| |||| |||||| |||| ||||||||||||    
T  10569852 aacctcttacgtggcttaccatgtcagatgccacgcaagcagggatcaaattgattgatttacagaaaattgccaaagaccaaattgat 10569764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 7371225 - 7371385
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| ||||||||||||||   | || |||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7371225 tccctgaattttgcgaaatagatattttgtccttgaatttataaaatgtcaatcaaatcagtccctcctttaagttggtctgttaaaggaggtgacgtgt 7371324  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    ||| ||||| ||| | ||  |||||||||| ||||  ||||||||||||||||||| ||||    
T  7371325 aacattaacctcttataagacttaccacgtcagataccacgcaagcagggaccaaattgat 7371385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 14337721 - 14337862
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||||| |||| || ||||  | || ||||||||||||| | |||||||||||||||||| ||||||||| |||||||| |||||||| ||||   |    
T  14337721 aaattttgcaaaatgtctaattcattcccgaatttacaaaatatcaatcaaatcagtccctccattaagttggcctgttaacagaggtgacatgtactat 14337820  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcag 169  Q
    |||| ||| || |||||||||| || |||||||||||||||||    
T  14337821 taacctcttac-aagcttaccatgtcagatgtcacgcaagcag 14337862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3456777 - 3456867
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  3456777 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 3456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13613677 - 13613617
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||   || ||| ||||| ||||||||||||||||||||||||||||||||||    
T  13613677 ttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattt 13613617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 18644961 - 18644914
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  18644961 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 18644914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 32518354 - 32518307
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  32518354 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 32518307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32455986 - 32455896
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||| ||||||||   | | ||  |||||||||||||||||||    
T  32455986 ttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctccgt 32455896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 33276854 - 33276917
Alignment:
Q  25 ctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||||||||||| | ||||   ||||||||| ||||||| |||||||||||| |||||||    
T  33276854 ctaaattttgcgaaatatctatttag---ctgaatttataaaatgtcaatcaaatcagttcctccgt 33276917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13106833 - 13107049
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||    
T  13106833 ttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagtccctccgttaagttggt 13106932  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13106933 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 13107032  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  13107033 caaggaccaaattgatg 13107049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13284055 - 13283839
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13284055 ttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 13283956  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  13283955 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttatcacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 13283856  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  13283855 caaggaccaaattgatg 13283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 27692897 - 27692681
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  27692897 ttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaattaaatcagtccctccgttaagttggt 27692798  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  27692797 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 27692698  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  27692697 caaggaccaaattgatg 27692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 38548891 - 38548675
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  38548891 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggt 38548792  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  38548791 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttt 38548692  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  38548691 caaggaccaaattgatg 38548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8608266 - 8608483
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccct-aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttgg 99  Q
    |||||||||||   |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8608266 ttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttgg 8608365  T
Q  100 tctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaattt 199  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||    
T  8608366 tctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagggaccaaactgattgatttacacaaaattt 8608465  T
Q  200 ccaaggaccaaattgatg 217  Q
    ||||||||||||||||||    
T  8608466 ccaaggaccaaattgatg 8608483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29239247 - 29239031
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  29239247 ttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatcaaattagtccctccgttaagttggt 29239148  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29239147 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 29239048  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  29239047 gaaggacgaaattgatg 29239031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 33707235 - 33707451
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  33707235 ttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtcactccgttaagttggt 33707334  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||     
T  33707335 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcagggaccaaactgattgatttacacaaaatttt 33707434  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  33707435 caaggaccaaattgatg 33707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 33761098 - 33761314
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||  | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33761098 ttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 33761197  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  33761198 ctgttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttc 33761297  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  33761298 gaaggacgaaattgatg 33761314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 35510879 - 35510663
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35510879 ttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 35510780  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||| | |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35510779 ctgttaacggaggtgacgtatcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 35510680  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  35510679 gaaggacgaaattgatg 35510663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 42943483 - 42943270
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42943483 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctg 42943384  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||| ||||    
T  42943383 ttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaa 42943284  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  42943283 ggaccaaattgatg 42943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 29237180 - 29237396
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  29237180 ttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggt 29237279  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  29237280 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaaggaccaaactgattgatttacacaaaatttc 29237379  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  29237380 gaaggacgaaattgatg 29237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 601764 - 601548
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  601764 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggt 601665  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||| | ||  |||||||||||||||||||||||||||| |||| ||||||||    
T  601664 ctgttaacggaggtgacgtttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagggaccaaactgattgatttacagaaaatttc 601565  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  601564 gaaggacgaaattgatg 601548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 35509243 - 35509459
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||      
T  35509243 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttgac 35509342  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  35509343 ctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacaaaaaatttc 35509442  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  35509443 gaaggacgaaattgatg 35509459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33762773 - 33762561
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33762773 ttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggt 33762674  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |    ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  33762673 ctgttaacggaggtgacgtgtcacgttaacct----caaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaatttc 33762578  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  33762577 gaaggacgaaattgatg 33762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 22273924 - 22273735
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22273924 aattttgcaaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 22273825  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||||||||| ||||||||| ||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  22273824 aacctcttacaaggcttaccacgtcagatgtcacacaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 22273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27404239 - 27404456
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||| |||||||| |||||| ||||||| |||||||| ||||||| ||||||||||||    
T  27404239 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtcccttcgttaagttggt 27404338  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  27404339 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 27404438  T
Q  201 caaggaccaaattgatga 218  Q
     || ||| ||||||||||    
T  27404439 gaatgactaaattgatga 27404456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15308321 - 15308105
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  15308321 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggt 15308222  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| || |||||||||     
T  15308221 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaatttt 15308122  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||| ||||    
T  15308121 gaaggacgaaatcgatg 15308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15488690 - 15488474
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  15488690 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagcccctccgttaagttggt 15488591  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| || |||||||||     
T  15488590 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttatacaaaatttt 15488491  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||| ||||    
T  15488490 gaaggacgaaatcgatg 15488474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 26238776 - 26238970
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | |||||||  |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  26238776 tccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgttaagttagtctgttaacggaggtgatgtgt 26238875  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    |  |||||| ||| |||| ||||||||||| |||||||||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||    
T  26238876 actgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcatggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 26238970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 5038095 - 5037916
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5038095 aattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgtt 5037996  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggacca 209  Q
    ||| ||| |||| ||||||||||| ||||| |||||||  | |||||||| |||||||| |||| |||||| | ||||||||    
T  5037995 aacctcttacaaggcttaccacgtcagatgccacgcaa--atggaccaaattgattgatttacagaaaattgctaaggacca 5037916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 43262175 - 43261984
Alignment:
Q  23 ccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgta 122  Q
    ||||||||||||||||||||| | |||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  |||||| | ||    
T  43262175 ccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtctgttaacg--ggtgacatcta 43262078  T
Q  123 acgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
     ||||||| ||| ||||||||||||||||  |||||||||||||||||||||||| |||||||| | || ||||||| ||| ||||||||||||    
T  43262077 ccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcagggaccaaattgattgattttcagaaaattttcaaagaccaaattgat 43261984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 41823933 - 41824134
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| ||| | |||||||||||||||| | |||||||  |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  41823933 aatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtccctccgttaagttggtctattaacggaggt 41824032  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattg 214  Q
    ||| ||||  |||||| ||| |||  ||||||||||| ||| | ||||||| ||||||||||| |||||||| |||| |||||| ||||||| |||||||    
T  41824033 gacttgtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacagggaccaaattgattgatttacataaaattgccaaggatcaaattg 41824132  T
Q  215 at 216  Q
    ||    
T  41824133 at 41824134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 41040798 - 41040934
Alignment:
Q  50 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 149  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||  ||||||||    
T  41040798 gtccttgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgttgacctcttacaagacttaccac 41040897  T
Q  150 gttagatgtcacgcaagcagggaccaaactgattgat 186  Q
    || ||||||||||||||||||||||||| ||||||||    
T  41040898 gtcagatgtcacgcaagcagggaccaaattgattgat 41040934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 3152032 - 3152201
Alignment:
Q  47 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttac 146  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||||||  || ||||| ||||| |||||| ||| |||| | ||||    
T  3152032 ttagtcccttaatttacaaaatgtcaatcaaattagtccctctgttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttac 3152131  T
Q  147 cacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||| |||||| |||| ||| ||||||||    
T  3152132 cacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaatgactaaattgat 3152201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 13484577 - 13484754
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||    | || |||| |||||||||||||||| |||||||||||||||||| ||||||||||||     
T  13484577 aaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtcta 13484676  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    |||||| |||||||||| ||||||||| | | |||| ||||||||||| ||||| ||| ||||||||||||||| ||||    
T  13484677 ttaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgat 13484754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 15562478 - 15562573
Alignment:
Q  26 taaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgta 122  Q
    |||||||||  ||||||||| ||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15562478 taaattttgtaaaatatcaatttagttcc-gaatttataaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgta 15562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 17807074 - 17807220
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||||| ||||||  | |||||||| |||||||||||| || ||||||| ||| |||||| ||||||||| ||||||||||||||||| ||||  ||    
T  17807074 aaattttgcaaaatatttatttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtgacatgtactgt 17807173  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggac 173  Q
    |||| ||| |||| |||||| | || |||||||||| ||||| ||||    
T  17807174 taacctcttacaaggcttacgatgtcagatgtcacgtaagcatggac 17807220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27691183 - 27691243
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27691183 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27691243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 29694348 - 29694208
Alignment:
Q  30 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaa 129  Q
    |||||| ||||||| | ||||| | | |||||  ||||| | |||||||||||| |||| |||||||| | |||||||||||||||| |||||   ||||    
T  29694348 ttttgcaaaatatctatttagttcttaaatttttaaaatatcaatcaaatcagttcctctgttaagttagcctgttaacggaggtgatgtgtactattaa 29694249  T
Q  130 catctgacaaagcttaccacgttagatgtcacgcaagcagg 170  Q
    |  || |||| | ||||||||| | ||| ||||||||||||    
T  29694248 ccgcttacaaggtttaccacgtcatatgccacgcaagcagg 29694208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 33708905 - 33708829
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||   ||| ||  |||||||| ||||||||||    
T  33708905 aatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgt 33708829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 9672033 - 9672096
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||||||||||| | |||||||| ||||||||||||| | ||||||||| || |||||||    
T  9672033 aattttgcgaaatatctatttagtccccgaatttacaaaatttcaatcaaatcggttcctccgt 9672096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 13108430 - 13108391
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13108430 tccctgaattttgcgaaatatcaaattagtccctgaattt 13108391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 27692694 - 27692648
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||    
T  27692694 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgat 27692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 38547284 - 38547317
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||||||||||||||||||||||||||    
T  38547284 aattttgcgaaatatcaaattagtccctgaattt 38547317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 601561 - 601514
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  601561 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 601514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 11719525 - 11719604
Alignment:
Q  50 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaa 129  Q
    ||||||||||||   |||||| |||||||| |||| ||| ||||||||||  ||||||||| | ||||||||| ||||||    
T  11719525 gtccctgaatttgttaaatgtcaatcaaattagtctctctgttaagttggcatgttaacggtgctgacgtgtatcgttaa 11719604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 29239044 - 29238997
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  29239044 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 29238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 33761301 - 33761348
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  33761301 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33761348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 33762574 - 33762527
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  33762574 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33762527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 35509446 - 35509493
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  35509446 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 35510676 - 35510629
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  35510676 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 9186686 - 9186616
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgtt 92  Q
    |||| ||||| ||||||||||||||||||||||| |||||   | |||| |||||| | ||||||||||||    
T  9186686 tccccaaattatgcgaaatatcaaattagtccctaaatttggcatatgtcaatcaatttagtccctccgtt 9186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 8609899 - 8609842
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||    
T  8609899 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 12515147 - 12515232
Alignment:
Q  35 cgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtg 120  Q
    |||||||| ||| ||||| ||||||||  ||||||| |||||| | |||||||||||| | ||||  ||||||||| | |||||||    
T  12515147 cgaaatattaaaatagtctctgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtg 12515232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13282510 - 13282567
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||    
T  13282510 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 27404460 - 27404489
Alignment:
Q  188 tacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||||||||||||||||||||||||    
T  27404460 tacacaaaatttccaaggaccaaattgatg 27404489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7883357 - 7883573
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||    
T  7883357 ttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttcaatcaaatcagtccctccgttaagttggt 7883456  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  7883457 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 7883556  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  7883557 caaggaccaaattgatg 7883573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 35903854 - 35904070
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||  | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  35903854 ttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggt 35903953  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  35903954 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacatcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 35904053  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  35904054 caaggaccaaattgatg 35904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 41979412 - 41979196
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  41979412 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatttcaatcaaatcaatccctccgttaagttggt 41979313  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  41979312 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttt 41979213  T
Q  201 caaggaccaaattgatg 217  Q
    | |||||||||||||||    
T  41979212 cgaggaccaaattgatg 41979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 46308836 - 46309052
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  46308836 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggc 46308935  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  46308936 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 46309035  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  46309036 gaaggacgaaattgatg 46309052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 38193570 - 38193354
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  38193570 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggt 38193471  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  38193470 ctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 38193371  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  38193370 gaaggacgaaattgatg 38193354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 46310496 - 46310280
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  46310496 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggt 46310397  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  46310396 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 46310297  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  46310296 gaaggacgaaattgatg 46310280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 53092652 - 53092868
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||| | | |||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  53092652 ttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggt 53092751  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  53092752 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 53092851  T
Q  201 caaggaccaaattgatg 217  Q
    ||| |||||||||||||    
T  53092852 caatgaccaaattgatg 53092868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 53094333 - 53094117
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  53094333 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccctccgttaagttggt 53094234  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  53094233 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagtgaccaaactgattgattcacacaaaatttc 53094134  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  53094133 gaaggacgaaattgatg 53094117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 54900134 - 54899918
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54900134 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 54900035  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||| |||||||||||||||| ||||||||||||     
T  54900034 atgttaacggaggtgacgtgtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagagaccaaactgattgatttacacaaaatttt 54899935  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  54899934 caaggaccaaattgatg 54899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 44795950 - 44795733
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| | ||| |||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||||||||||||||||    
T  44795950 ttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatttacaaaatatcaaacaaatcagtccctccgttaagttggt 44795851  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  44795850 ctgttaatggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggatcaaactgattgatttacacaaaatttc 44795751  T
Q  201 caaggaccaaattgatga 218  Q
    ||||||||||||||||||    
T  44795750 caaggaccaaattgatga 44795733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3150281 - 3150497
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  3150281 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggt 3150380  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| | |||||||||||||||| |||||||||||||    
T  3150381 ctgttaacggatgtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttc 3150480  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  3150481 caaggaccaaattgatg 3150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 46609178 - 46609394
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  46609178 ttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctacgttaagttggt 46609277  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
     |||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  46609278 ttgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 46609377  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  46609378 gaaggacgaaattgatg 46609394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 53187771 - 53187987
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  53187771 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgat 53187870  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||| | |||||||||||||||| |||||||||||||    
T  53187871 ctggtaacggaggtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggagaccaaactgattgatttacacaaaatttc 53187970  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  53187971 caaggaccaaattgatg 53187987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 2661968 - 2661752
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||| | |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  2661968 ttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttggt 2661869  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||| || |||||||||||||||||| |||||| |||||||||||||    
T  2661868 ctgttaacagaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggaccaaactaattgatttacacaaaatttc 2661769  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  2661768 caaggaccaaattgatg 2661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 46611349 - 46611147
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  46611349 aatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgttaagttggcctgttaacggaggt 46611250  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattg 214  Q
    ||||||| |||||||| |||||||||||||||||||| ||||| || ||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||    
T  46611249 gacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaaggaccaaactgattgatttacacaaaatttcgaaggacgaaattg 46611150  T
Q  215 atg 217  Q
    |||    
T  46611149 atg 46611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28626440 - 28626656
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  28626440 ttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggt 28626539  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  28626540 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttc 28626639  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  28626640 gaaggactaaattgatg 28626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 2379029 - 2378827
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| ||||| |||||||| ||||| | | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  2379029 aatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggt 2378930  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattg 214  Q
    ||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||| || | |||||| |||| ||||||||||    
T  2378929 gacgtgtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttaaagaaaattgccaatgaccaaattg 2378830  T
Q  215 atg 217  Q
    |||    
T  2378829 atg 2378827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 21350638 - 21350448
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | || |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  21350638 aattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgtt 21350539  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatga 218  Q
    ||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||| ||||| |||||||||||||    
T  21350538 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatga 21350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 54412580 - 54412391
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||| ||||| | ||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  54412580 aattttgcgagatatctatttagttcctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgtt 54412481  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| | | |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  54412480 aaccttttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 54412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 611261 - 611066
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||| ||||||| | | |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  611261 tccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgt 611162  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||| | ||||||||||||||| |||||||||||||| |||| |||||||| |||| |||||| |||||||| |||||||||    
T  611161 aacgttaacctcttacaaggtttaccacgttagatgccacgcaagcagggatcaaattgattgatttacagaaaattgccaaggactaaattgatg 611066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 38191924 - 38192124
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||| | | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38191924 ttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 38192023  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||            ||||||||||| |||||||||||||||| |||||||||||||    
T  38192024 ctgttaacggaggtgacatgtcacgttaacctctgacaaagcttac------------cacgcaagcagtgaccaaactgattgatttacacaaaatttc 38192111  T
Q  201 caaggaccaaatt 213  Q
     |||||| |||||    
T  38192112 gaaggacgaaatt 38192124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 51686433 - 51686239
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    |||||||||||||||||||||  | |||||||  |||||||||||||||  |||||||||||||||| || |||||||| |||||||| |||||||||||    
T  51686433 tccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgttcatcaaatcagtccctctgtcaagttggtatgttaacgaaggtgacgtgt 51686334  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    | ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  51686333 accgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 51686239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 17517006 - 17516817
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    ||||||||||||||   | || |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17517006 aattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaacgtt 17516907  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||    
T  17516906 aacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 17516817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 23291602 - 23291814
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  23291602 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagtctg 23291701  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||| | ||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| ||||| || |||| ||||||  | |    
T  23291702 tta-cagaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattaatttacagaaaattgtcga 23291800  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  23291801 ggaccaaattgatg 23291814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 43767090 - 43766889
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    ||||||||| |||||||| ||||| | | || |||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||     
T  43767090 ttcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgat 43766991  T
Q  118 gtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||||||| ||| | || ||||||||||| | ||||||||||||||||||||||| |||||||| |||  ||||||  |||||||||||||||||    
T  43766990 gtgtaacgttaacctcttataaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacggaaaattgtcaaggaccaaattgatg 43766891  T
Q  218 at 219  Q
    ||    
T  43766890 at 43766889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 46114138 - 46113949
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | ||||||  |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46114138 aattttgcgaaatatctatttagtcattgaatttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgtt 46114039  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| | |||||| || ||||| ||||||||||| ||||||| |||||||| |||| ||||||  ||||||| |||||||||    
T  46114038 aacctcttacaaggtttaccatgtcagatgccacgcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattgatg 46113949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 42282506 - 42282318
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | ||||||| ||||||||||||||||  || ||||||||||||||||||||||||| ||||||| |||||||| |||| ||||    
T  42282506 aattttgcgaaatatctatttagtccttgaatttacaaaatgttcattaaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtaccgtt 42282407  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| |||| | ||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  42282406 aacctcttacaaggtttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 42282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 47 - 217
Target Start/End: Original strand, 27897225 - 27897395
Alignment:
Q  47 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttac 146  Q
    |||||| ||||||||||||||| | |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||  ||||||    
T  27897225 ttagtctctgaatttacaaaatatcaatcaaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 27897324  T
Q  147 cacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  27897325 cacgtcagatgtcacgcaagtagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 27897395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 44268013 - 44268226
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || |||||| || |||||||||||||| | | || |||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||    
T  44268013 aaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgtcaatcaaatcagtccctccgttaagttggtatg 44268112  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||||||||||||||||| ||  |||| | ||||||||| || || |||| |||||||||||||| || ||||| |||| |||||| ||||    
T  44268113 ttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccacgtcagttgccacgtaagcagggaccaaattggttgatttacagaaaattgccaa 44268212  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  44268213 ggaccaaattgatg 44268226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 48829396 - 48829599
Alignment:
Q  11 gccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacgg 110  Q
    ||||||||| || ||| |||||||||||||||| | |||||||  | |||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  48829396 gccaaattt-attcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgtccatcaaatcagtccctcggttaagttggtctgttaacgg 48829494  T
Q  111 aggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaa 210  Q
    |||||| |||||  |||||| ||| |||| ||||||||||| ||| |||||||||||| |||||||| |||||||| |||| ||||||  ||||||||||    
T  48829495 aggtgaagtgtactgttaacctcttacaaggcttaccacgtcagaggtcacgcaagcaaggaccaaattgattgatttacagaaaattgtcaaggaccaa 48829594  T
Q  211 attga 215  Q
    |||||    
T  48829595 attga 48829599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 30598387 - 30598582
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||| | | || |||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30598387 tccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaattagtccctccgttaagttggtatgttaacggaggtgacgtgt 30598486  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||  ||| |||| |||| |||||| ||||  ||||||||||| |||||||  ||||||| |||| ||||||  ||| |||||||||||||    
T  30598487 aacgttaaactcttacaaggcttgccacgtcagataccacgcaagcagagaccaaatagattgatttacagaaaattgtcaatgaccaaattgatg 30598582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3152333 - 3152273
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  3152333 ttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 3152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 44794240 - 44794296
Alignment:
Q  5 aaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  44794240 aaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 44794296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2660241 - 2660301
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  2660241 ttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattt 2660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 19987695 - 19987619
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||   | | ||  |||||||||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgt 19987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 2661765 - 2661718
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  2661765 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 2661718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 3150484 - 3150531
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  3150484 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 3150531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 53187974 - 53188021
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  53187974 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 53188021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 24846548 - 24846491
Alignment:
Q  58 atttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtga 116  Q
    |||| |||||||| ||| ||||||||||||||||||||||||  |||||||||||||||    
T  24846548 attttcaaaatgtcaattaaatcagtccctccgttaagttgg-atgttaacggaggtga 24846491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 53092856 - 53092902
Alignment:
Q  171 gaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  53092856 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 53092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 28626643 - 28626690
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  28626643 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 28626690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 33051506 - 33051451
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaa 77  Q
    |||||||||||||| ||||||||| || ||||||||||||  ||||||| ||||||    
T  33051506 tccctaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgtcaatcaa 33051451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 38193367 - 38193320
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  38193367 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 38193320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 41977800 - 41977839
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  41977800 tccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 44795747 - 44795700
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| ||||  || ||||||||||||||||||||||||||||||    
T  44795747 ggaccaaattgatgaatttacacaaaatttccaaggaccaaattgatg 44795700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 46309039 - 46309086
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  46309039 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 46310293 - 46310246
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  46310293 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46310246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 46609381 - 46609428
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  46609381 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 46609428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 53094130 - 53094083
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  53094130 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 53094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 2226264 - 2226207
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||    
T  2226264 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 18430349 - 18430308
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaat 59  Q
    ||||||||| |||| ||||||||||||| |||||||||||||    
T  18430349 ttcatccctcaattatgcgaaatatcaacttagtccctgaat 18430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 53190871 - 53190814
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||    
T  53190871 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 40963426 - 40963370
Alignment:
Q  35 cgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||| ||| ||||||||||||||  ||||||| |||||| | |||||||||||    
T  40963426 cgaaatatgaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgt 40963370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 37346022 - 37345806
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37346022 ttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 37345923  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    || |||||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||    
T  37345922 ctattaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgacttacacaaaatttc 37345823  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  37345822 caaggaccaaattgatg 37345806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25276771 - 25276987
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25276771 ttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 25276870  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  25276871 ctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttc 25276970  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  25276971 gaaggacgaaattgatg 25276987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26223616 - 26223832
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  26223616 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccattaagttggt 26223715  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  26223716 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttaaacaaaatttc 26223815  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  26223816 caaggaccaaattgatg 26223832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 46582039 - 46582255
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46582039 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 46582138  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||| ||||||||||||     
T  46582139 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaaatgatagatttacacaaaatttt 46582238  T
Q  201 caaggaccaaattgatg 217  Q
    |||| ||||||||||||    
T  46582239 caagaaccaaattgatg 46582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 27089339 - 27089123
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| |||||||| ||| | ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  27089339 ttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggt 27089240  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  27089239 ttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgttagatgccacgcaagcaggaaccaaactgattgatttacacaaaatttc 27089140  T
Q  201 caaggaccaaattgatg 217  Q
    ||| |||||||||||||    
T  27089139 caatgaccaaattgatg 27089123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34776598 - 34776814
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  34776598 ttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatttcaatcagatcagtccctccgttaagttggt 34776697  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||  ||||||||||||||||||||||||||| |||||||||||||    
T  34776698 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcagggaccaaactgattgatttacacaaaatttc 34776797  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  34776798 caaggaccaaattgatg 34776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 4854439 - 4854655
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  4854439 ttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaatttacaaaatttcaatcaaatcagtcactccgttaagttggt 4854538  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||    
T  4854539 ctgttaacggaggtgatgtgtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 4854638  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  4854639 caaggaccaaattgatg 4854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 8169628 - 8169412
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  8169628 ttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgttaagttggt 8169529  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8169528 ctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgattcacacaaaatttc 8169429  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  8169428 gaaggacgaaattgatg 8169412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8167971 - 8168186
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| || || |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  8167971 ttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcagtccctccgttaagttggt 8168070  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| | ||||||||||||||||| |||||||||||||    
T  8168071 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagta-ggaccaaactgattgatttacacaaaatttc 8168169  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  8168170 gaaggacgaaattgatg 8168186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1444241 - 1444025
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||  ||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  1444241 ttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 1444142  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  1444141 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttt 1444042  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  1444041 gaaggacgaaattgatg 1444025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 33599274 - 33599463
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  33599274 aattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacgtgtaacttt 33599373  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| ||||| |||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33599374 aacctcttacaaaacttaccacgtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 33599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9120068 - 9120284
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  9120068 ttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 9120167  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | |||||||| |||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  9120168 ccgttaacgggggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaatttt 9120267  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  9120268 gaaggacgaaattgatg 9120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 47011485 - 47011701
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||| | |||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||     
T  47011485 ttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgttaatttggc 47011584  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  47011585 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 47011684  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  47011685 gaaggacgaaattgatg 47011701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 45044993 - 45045165
Alignment:
Q  45 aattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagctt 144  Q
    |||| ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  45044993 aattcgtccctgaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt 45045092  T
Q  145 accacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| ||||| ||||||||||||    
T  45045093 accacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatg 45045165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 2871133 - 2870920
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||| | | || |||  |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2871133 aaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgctctg 2871034  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    |||||||| |||||||||||||||||| ||| |||| ||||||||||| ||||| ||| ||||||||||||||| |||||||| | || |||||| ||||    
T  2871033 ttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggaccaaattgattgatttgcagaaaattgccaa 2870934  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  2870933 ggaccaaattgatg 2870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 31236869 - 31237060
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31236869 tccctgaattttgcgaaatatctatttagttcctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgt 31236968  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaatt 213  Q
    |||||||||  || |||| ||||||||||| ||||  ||||||||||| ||||||| |||||||| |||| ||||||  |||||||||||||    
T  31236969 aacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcagagaccaaattgattgatttacataaaattgtcaaggaccaaatt 31237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 3011911 - 3012100
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  3011911 aattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccatccgttaagttggtctattaacggagatgacgtgtaacgtt 3012010  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||| ||||| ||||  ||||||||||| ||||||| |||||||| |||| |||||| | ||||||||||||||||    
T  3012011 aacctcttacaaggcttatcacgtcagataccacgcaagcagagaccaaattgattgatttacagaaaattgctaaggaccaaattgatg 3012100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 51894623 - 51894812
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51894623 aattttgcgaaatatatatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgtt 51894722  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||  ||| ||||  |||||||| | ||||| ||||| ||||||||||||| |||||||| |||| ||||||  ||| |||||||||||||    
T  51894723 aaactcttacaagacttaccacatcagatgccacgccagcagggaccaaattgattgatttacagaaaattgtcaacgaccaaattgatg 51894812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 50554213 - 50554408
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||  ||||| | | ||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  50554213 tccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacgggggtgacgtgt 50554312  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||  ||||||||||| | |||||| ||||  |||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  50554313 aacgttaacctcttacatggcttaccacgtcaaatgtcatgcaataagggaccaaattgattgatttacacaaaattgccaaggaccaaattgatg 50554408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 52641938 - 52642132
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||  | |||||||   ||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||| |||    
T  52641938 tccctgaattttgcgaaatatatatttagtcctcaaatttacaaaatgttcatcaaatcagtccctccgttaagttggtatattaacggaggtgacatgt 52642037  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    | ||||||| ||| ||||| |||||||||| ||||| ||| ||||||||||||||| |||||||| | || |||||||| || ||||||||||||    
T  52642038 accgttaacttcttacaaaacttaccacgtcagatgccacacaagcagggaccaaattgattgattttcagaaaatttctaatgaccaaattgat 52642132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 23577692 - 23577815
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||||||||||||  ||||||| |||||||| || ||||||||||| |||||||| |||| ||||||||||||||||||||| |||||    
T  23577692 aattttgcgaaatatcaaattagtcaatgaatttgcaaaatgtcaaccaaatcagtccgtccgttaaattggcctgttaacggaggtgacgtgtcacgtt 23577791  T
Q  128 aacatctgacaaagcttaccacgt 151  Q
    ||| ||||||||||||||||||||    
T  23577792 aacctctgacaaagcttaccacgt 23577815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 37088169 - 37087981
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | || |||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||    
T  37088169 aattttgcgaaatagctattttgtccttaaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaaagtt 37088070  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| ||||  ||||||| || ||||| ||| |||| |||||||||| |||||||| || | ||||||  ||||| ||||||||||    
T  37088069 aacctcttacaagacttaccaagtcagatgccacacaagtagggaccaaattgattgatttagagaaaattgtcaagggccaaattgat 37087981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 6816906 - 6817047
Alignment:
Q  42 tcaaattagtccctgaattta-caaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaa 140  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||     
T  6816906 tcaaattcgtccctgaattttgcaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaag 6817005  T
Q  141 gcttaccacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    | ||||||||| ||||| ||||||| || |||||||| ||||    
T  6817006 ggttaccacgtcagatgccacgcaaacaaggaccaaattgat 6817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 20945013 - 20944934
Alignment:
Q  138 aaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||    
T  20945013 aaagcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatg 20944934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9121763 - 9121673
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  9121763 ttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 9121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47013177 - 47013087
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||   ||| ||  |||||||||||||||||||    
T  47013177 ttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 47013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 3369513 - 3369627
Alignment:
Q  55 tgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttag 154  Q
    ||||||||| | |||| ||||||||  ||| |||||||||||||| ||||||||||||||||| ||||  ||| || ||| |||| ||||  || || ||    
T  3369513 tgaatttaccacatgtcaatcaaattcgtcactccgttaagttggcctgttaacggaggtgacatgtattgtttacctctcacaaggcttgtcatgtcag 3369612  T
Q  155 atgtcacgcaagcag 169  Q
    ||||||| |||||||    
T  3369613 atgtcacacaagcag 3369627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33602739 - 33602679
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||   |||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  33602739 ttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 33602679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46583651 - 46583591
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||   |||||  ||||| ||||||||||||||||||||||||||||||||||    
T  46583651 ttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 46583591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 4856040 - 4856001
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  4856040 tccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 34778212 - 34778173
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  34778212 tccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 37345819 - 37345772
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  37345819 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 37345772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 27089135 - 27089089
Alignment:
Q  171 gaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  27089135 gaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 27089089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 51123591 - 51123541
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaa 77  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  51123591 aaattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaa 51123541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 8168173 - 8168220
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  8168173 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 8168220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 8169425 - 8169378
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  8169425 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 8169378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 25276974 - 25277021
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  25276974 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 25277021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 25277008 - 25277055
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| |||| |||||||||||||||||||||||||    
T  25277008 ggaccaaattgatggatttacataaaatttccaaggaccaaattgatg 25277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 18184020 - 18183978
Alignment:
Q  19 tcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| |||| ||||||||||||| |||||||||||||||    
T  18184020 tcatccctcaattatgcgaaatatcaacttagtccctgaattt 18183978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 42134529 - 42134571
Alignment:
Q  19 tcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| |||| ||||||||||||| |||||||||||||||    
T  42134529 tcatccctcaattatgcgaaatatcaacttagtccctgaattt 42134571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 6577140 - 6577091
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaa 77  Q
    |||| ||||||||||||| ||| ||||||||||||| |||||| ||||||    
T  6577140 aattatgcgaaatatcaatttaatccctgaatttactaaatgtcaatcaa 6577091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 25279025 - 25278988
Alignment:
Q  24 cctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||||||||||| | |||||||||||||||    
T  25279025 cctaaattttgcgaaatatctatttagtccctgaattt 25278988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43507196 - 43507412
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  43507196 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttgga 43507295  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  43507296 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 43507395  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  43507396 gaaggacgaaattgatg 43507412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 51013946 - 51013730
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51013946 ttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 51013847  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||    
T  51013846 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttacacaaaatttc 51013747  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  51013746 caaggaccaaattgatg 51013730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4173800 - 4173584
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||     
T  4173800 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatcaactcagtccctccgttaagttggc 4173701  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  4173700 ctgttaacggaggtgacgtgtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 4173601  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  4173600 gaaggacgaaattgatg 4173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 43508713 - 43508497
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  43508713 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggc 43508614  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  43508613 ctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 43508514  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  43508513 gaaggacgaaattgatg 43508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33266070 - 33265854
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  33266070 ttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttagt 33265971  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  33265970 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacataaaatttc 33265871  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  33265870 gaaggacgaaattgatg 33265854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 319302 - 319518
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  319302 ttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggt 319401  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||| |||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  319402 ctgttaacagaggtgacgtgtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 319501  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  319502 gaaggacgaaattgatg 319518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 320960 - 320744
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||||||| | |||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||     
T  320960 ttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtcaatcaactcagtccctccgttaagttggc 320861  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  320860 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 320761  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  320760 gaaggacgaaattgatg 320744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 43521142 - 43520953
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||| ||||||||||| |||||    
T  43521142 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacgtt 43521043  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  43521042 aacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 43520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 33264411 - 33264628
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  33264411 ttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 33264510  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaa-ttt 199  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||| ||| ||||| |||    
T  33264511 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatggaccaaactgattgatttacgcaaaatttt 33264610  T
Q  200 ccaaggaccaaattgatg 217  Q
    | |||||| |||||||||    
T  33264611 cgaaggacgaaattgatg 33264628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 5437840 - 5438056
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| |||||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  5437840 ttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggt 5437939  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| || ||||| ||||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  5437940 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaacacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttc 5438039  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  5438040 gaaggactaaattgatg 5438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5439707 - 5439491
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  5439707 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggt 5439608  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  5439607 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttc 5439508  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  5439507 gaaggactaaattgatg 5439491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 833252 - 833468
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  833252 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggt 833351  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| ||||  || |||||||||||||    
T  833352 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatgaatttacacaaaatttc 833451  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  833452 gaaggactaaattgatg 833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 20493883 - 20494072
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20493883 aattttgcgaaatatctatttagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgtt 20493982  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||    
T  20493983 aacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattggcaaggaccaaattgatg 20494072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 35401781 - 35401994
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| ||||||| |||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  35401781 aaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagctggtctg 35401880  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| ||||    
T  35401881 ttaacggaggtgacgtgtaacgttaacctcttacaaaccttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaa 35401980  T
Q  204 ggaccaaattgatg 217  Q
    | ||||||||||||    
T  35401981 gcaccaaattgatg 35401994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 835102 - 834886
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||  ||||| |||| | |||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||| |||||    
T  835102 ttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgttaaattggt 835003  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  835002 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggaccaaattgatggatttacacaaaatttc 834903  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  834902 gaaggactaaattgatg 834886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 49524772 - 49524577
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||| ||||| | | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49524772 tccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccttccgttaagttggtctgttaacggaggtgacgtgt 49524673  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| || | ||||||||||| | ||||||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||    
T  49524672 aacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 49524577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 39345596 - 39345805
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||| | | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||    
T  39345596 aaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtctctccgttaagttggtatg 39345695  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||| | ||||| ||| ||||||||||||||| |||||||| |||| |||||| ||||    
T  39345696 ttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagggaccaaattgattgatttacagaaaattgccaa 39345795  T
Q  204 ggaccaaatt 213  Q
    ||| ||||||    
T  39345796 ggatcaaatt 39345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 4169729 - 4169876
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  4169729 aatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttggtctgttaatggaggt 4169828  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacg 162  Q
    ||||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  4169829 gacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacg 4169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 54387915 - 54387728
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||||  |||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||    
T  54387915 aattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgtt 54387817  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| |||| ||||||||||| | ||| ||||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  54387816 aacctcttacaaggcttaccacgtcaaatgccacgcaagcagggactaaactgattgatttacagaaaattgccaaggaccaaattgat 54387728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 48645311 - 48645499
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||||  |||||||||||||||  ||||||||||| |||||||| | |||||||||||||| ||||||||||||  |||    
T  48645311 aattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtacctccgttcaattggtctgttaacgaaggtgacgtgtattgtt 48645410  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||  |||||| |||||||||    
T  48645411 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggatcaaattgat 48645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 42982491 - 42982327
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| ||||||||||||||   | || |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42982491 tccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgt 42982392  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgat 186  Q
    |||||| || | | ||||  |||||||||| ||||| ||| ||||||||||||||| ||||||||    
T  42982391 aacgttgaccttttacaagccttaccacgtcagatgccacacaagcagggaccaaattgattgat 42982327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 11254172 - 11254328
Alignment:
Q  25 ctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaac 124  Q
    ||||||||||||||||| |   || |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  11254172 ctaaattttgcgaaatagctcttttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaac 11254271  T
Q  125 gttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    |||| | ||| |||| ||||||||||| ||||| || |||||||||||||||| ||||    
T  11254272 gttatc-tcttacaaggcttaccacgtcagatgccatgcaagcagggaccaaattgat 11254328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 20820037 - 20820137
Alignment:
Q  24 cctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaa 123  Q
    |||||||||||| ||||||  | ||||||||||||||| |||||||| |||||||||||| | ||||||||||||| |||||||| |||||||||| |||    
T  20820037 cctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtcaatcaaatcagttcatccgttaagttggcctgttaacagaggtgacgtttaa 20820136  T
Q  124 c 124  Q
    |    
T  20820137 c 20820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 2691428 - 2691530
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||||| ||||||| | |||||||||||||||  ||||||| |||||||||||||  ||||||||||||| ||||||| |||||||| ||| | |||    
T  2691428 aaattttgcaaaatatctatttagtccctgaatttttaaaatgtcaatcaaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgt 2691527  T
Q  127 taa 129  Q
    |||    
T  2691528 taa 2691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 41759492 - 41759557
Alignment:
Q  58 atttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaa 123  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgtaa 41759557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 4172299 - 4172357
Alignment:
Q  159 cacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  4172299 cacgcaagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatg 4172357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43519453 - 43519543
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||   ||| ||  |||||||| ||||||||||    
T  43519453 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgt 43519543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 43520966 - 43520919
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  43520966 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 43520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 320757 - 320710
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  320757 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 320710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 833455 - 833502
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  833455 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 833502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 834899 - 834852
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  834899 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 4173597 - 4173550
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  4173597 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 4173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 5438043 - 5438090
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  5438043 ggactaaattgatggatttacacaaaatttccaaggaccaaattgatg 5438090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 5486097 - 5486054
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  5486097 ttcatccctaaatttaacgaaatatcaaaatagtccctgaattt 5486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 33264615 - 33264662
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  33264615 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33264662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 33265867 - 33265820
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  33265867 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 33265820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 43507399 - 43507446
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  43507399 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 43507446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 43508510 - 43508463
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  43508510 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 43508463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 44558571 - 44558528
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  44558571 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 44558528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 319523 - 319553
Alignment:
Q  188 tacacaaaatttccaaggaccaaattgatga 218  Q
    |||||||||||||||||||||||||||||||    
T  319523 tacacaaaatttccaaggaccaaattgatga 319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 11642065 - 11642015
Alignment:
Q  72 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgta 122  Q
    |||||| ||||||| || ||||||||||  |||||||||||||||||||||    
T  11642065 aatcaattcagtccatctgttaagttggcttgttaacggaggtgacgtgta 11642015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 26397952 - 26397819
Alignment:
Q  35 cgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatct 134  Q
    |||||||||| ||||||  ||||| ||   |||||| |||||||| |||| ||||||||||||||  | ||||||| | ||||||||   |||||| |||    
T  26397952 cgaaatatcacattagtttctgaagttgtcaaatgtcaatcaaattagtctctccgttaagttgggatattaacggtgatgacgtgttctgttaacctct 26397853  T
Q  135 gacaaagcttaccacgttagatgtcacgcaagca 168  Q
     |||| ||||  || || ||||||||| ||||||    
T  26397852 cacaaggcttgtcatgtcagatgtcacacaagca 26397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 41761838 - 41761781
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| |||| ||||||||||||||||| | |||||||||||||||    
T  41761838 aaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattt 41761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 16764671 - 16764456
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||| |||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  16764671 ttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgttaagttg-t 16764573  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  16764572 ctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagcagagaccaaactgattgatttacacaaaatttc 16764473  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  16764472 caaggaccaaattgatg 16764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14387378 - 14387594
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || |     
T  14387378 ttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccctccgttaaattaga 14387477  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14387478 ctgttaaagaaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 14387577  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  14387578 caaggaccaaattgatg 14387594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 24205627 - 24205843
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  24205627 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttcagttggt 24205726  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||    
T  24205727 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcagggaccaaactgattgatttacacaaaatttc 24205826  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  24205827 gaaggacgaaattgatg 24205843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 40561938 - 40561722
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| || || ||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  40561938 ttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtcaatcaaatcggtccctccgttaagttggt 40561839  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||| |||||    
T  40561838 ttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacacaacatttc 40561739  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  40561738 caaggaccaaattgatg 40561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 2577540 - 2577324
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  2577540 ttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 2577441  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2577440 ctgttaacagaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactaattgatttacacaaaatttc 2577341  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  2577340 gaaggacgaaattgatg 2577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 37022245 - 37022029
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  37022245 ttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 37022146  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | ||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  37022145 ccgttaacggaagtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaatttt 37022046  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  37022045 gaaggacgaaattgatg 37022029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 6783407 - 6783586
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| ||||| |||| | | |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  6783407 aatttcgtccctgaattattcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattattccctccgttaagttggtctgttaacggaggt 6783506  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaa 194  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  6783507 gacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaa 6783586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 19906732 - 19906927
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19906732 tccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgt 19906831  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||  ||||||||||| ||||| ||||||| ||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  19906832 aacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 19906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 39663204 - 39663397
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||| ||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39663204 tccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 39663303  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||  ||||||||||| |||||||||||||||||||| |||| |||||||| |  ||| |||| ||||||||||||||||||    
T  39663304 aacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagggatcaaattgattgattt--acataattgccaaggaccaaattgatg 39663397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 39456813 - 39456624
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||| | | |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  39456813 aattttgcaaaatagctatttagtccctgaatttataaaatgtcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacgtgtaacatt 39456714  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||||||||| | ||||||||||||||||||||||| |||||||| || | ||||||  ||||||| |||||||||    
T  39456713 aacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttatagaaaattgtcaaggactaaattgatg 39456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 42517614 - 42517802
Alignment:
Q  29 attttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtta 128  Q
    ||||| ||||||| | | || |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42517614 attttacgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgtta 42517713  T
Q  129 acatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    || ||  |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||| ||||||  |||||| ||||||||||    
T  42517714 acctcatacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggagcaaattgatg 42517802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 16376786 - 16376981
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||| ||||||| | | |||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| || | |    
T  16376786 tccctgaattttacgaaatagctatttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtctattaacagaggtaacattt 16376885  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||| ||||||||||| | ||||||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||    
T  16376886 aacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 16376981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 19581464 - 19581658
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | |||||||  |||||||| ||||||  ||||||||||||  ||||||||||| || |||||||||||||||| |||    
T  19581464 tccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaatcagtctttccgttaagtttgtatgttaacggaggtgacatgt 19581563  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    |   ||||| ||| |||| ||||||||||| | ||||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  19581564 actattaacttcttacaaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgat 19581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 6799441 - 6799251
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgta-aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    |||||||| ||||| | | || |||| |||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6799441 aattttgccaaatagctattttgtccttgaatttataaaattttcaatcaaatcagtccctccgttaagttggtctgttaacggtggtgacgtgtaacgt 6799342  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||||||||||  ||||| |||||||| |||||||||  |||||||| || | |||||| ||||||||||||||||||    
T  6799341 taacctcttacaaggcttaccacgccagatgccacgcaagtagggaccaagttgattgatttagagaaaattgccaaggaccaaattgatg 6799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 17698120 - 17697953
Alignment:
Q  50 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 149  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||||| | | ||||||||||||||||||||||||||  ||| | ||  ||||||||    
T  17698120 gtccttgaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaatctcttaaaagacttaccac 17698021  T
Q  150 gttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||||||||||||||||||||| | |||  | |||  ||||||  |||||||||||||||||    
T  17698020 gttagatgtcacgcaagcagggaccaaattaattagtttactgaaaattgtcaaggaccaaattgatg 17697953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 34400346 - 34400553
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||||||||| |||||||||||||| | | || |||| |||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  34400346 aaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaatttacaaaatatcaatcaaatcggtccctccgttaagttggtctg 34400445  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    |||||||||||||  ||||| ||| || ||| ||||  |||||||||| |||||||||||       ||||||| |||||||| |||| |||| |  |||    
T  34400446 ttaacggaggtgatatgtaatgttgacctcttacaagacttaccacgtcagatgtcacgc------cgaccaaattgattgatttacagaaaaatgtcaa 34400539  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  34400540 ggaccaaattgatg 34400553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 27 - 173
Target Start/End: Complemental strand, 37646512 - 37646366
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||| ||||||||||| | ||||||||||||||| |||||||  ||||||||||||||||| |||||||||| ||||||||||| ||||| ||||  ||    
T  37646512 aaattctgcgaaatatctatttagtccctgaattttcaaaatgccaatcaaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgt 37646413  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggac 173  Q
    ||||  || |||| ||||||||||| |||||||||||||||||||||    
T  37646412 taaccgcttacaaggcttaccacgtcagatgtcacgcaagcagggac 37646366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 31475114 - 31474972
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaa-tgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacg 125  Q
    |||||||| |||||||| | ||| ||||||||||| ||||| ||| ||||||||| ||||||| |||||||||   |||||||||||||||||||||  |    
T  31475114 aaattttgagaaatatctatttaatccctgaattttcaaaaatgtcaatcaaatcggtccctctgttaagttgacatgttaacggaggtgacgtgtactg 31475015  T
Q  126 ttaacatctgacaaagcttaccacgttagatgtcacgcaagca 168  Q
    |||||  || |||| ||||||||||| ||||||||||||||||    
T  31475014 ttaaccgcttacaatgcttaccacgtcagatgtcacgcaagca 31474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 162109 - 161967
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    ||||||| | ||||||| | ||||| | ||||||| ||||| || |||||||||  ||| |||||||||||||||| |||||||||||||| |||| |||    
T  162109 aaattttacaaaatatctatttagttcttgaattttcaaaacgtcaatcaaatcgatccatccgttaagttggtctattaacggaggtgacatgtaccgt 162010  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcag 169  Q
    ||||  || ||||  |||||||||| |||||||||||||||||    
T  162009 taaccgcttacaagacttaccacgtcagatgtcacgcaagcag 161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24208157 - 24208067
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  24208157 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 24208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6786096 - 6786006
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| |||| |  ||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  6786096 ttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 6786006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 6783587 - 6783634
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  6783587 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 6783634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 14389196 - 14389109
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||| | || ||| ||||| |||||||||||||||| | ||||||||||||||| | ||||||  ||||||   ||||||||||    
T  14389196 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgt 14389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 16764469 - 16764422
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||| ||||||||||||||||    
T  16764469 ggaccaaattgatggatttacacaaaatttctaaggaccaaattgatg 16764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24205830 - 24205877
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  24205830 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 24205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 37417319 - 37417362
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  37417319 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 37417362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 7269503 - 7269290
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  |||||||||||| ||||    
T  7269503 aaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgttaatcaaatcagtcagtccgttaagttgatctg 7269404  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  7269403 ttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagggaccaaactgattgatttacacaaaatttccaa 7269304  T
Q  204 ggaccaaattgatg 217  Q
    ||||||||||||||    
T  7269303 ggaccaaattgatg 7269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17577995 - 17577779
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| |  ||||| ||||| |||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| |||||    
T  17577995 ttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggt 17577896  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17577895 ctgttaacggagctgacgtgtaacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggaccaaactgattgatttacacaaaatttc 17577796  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  17577795 caaggaccaaattgatg 17577779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 40782271 - 40782055
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  40782271 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 40782172  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  40782171 ccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaatttc 40782072  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  40782071 gaaggacgaaattgatg 40782055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 29620167 - 29620383
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||    
T  29620167 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 29620266  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  29620267 ccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaatttt 29620366  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  29620367 gaaggacgaaattgatg 29620383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 28813798 - 28813608
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  28813798 aattttgcgaaatatctatttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtgacgtgtaacgtt 28813699  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatga 218  Q
    ||| ||| |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  28813698 aacctcttacaaggcttaccacgttagatgtcacgcaagcagcgaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 28813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 21843025 - 21842836
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | | |||||||||||||||||| |||||    
T  21843025 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttttttttttaacggaggtgacgtgttacgtt 21842926  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  21842925 aacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaatgaccaaattgatg 21842836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 2852929 - 2853110
Alignment:
Q  15 aatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggt 114  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2852929 aatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggt 2853028  T
Q  115 gacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaa 196  Q
    |||||||||||||||| |||||||||||||||||| | ||||| |||||||||||| ||||||||||||||| ||| |||||    
T  2853029 gacgtgtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcaggaaccaaactgattgatttacgcaaaa 2853110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 12738769 - 12738580
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12738769 aattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgtt 12738670  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||   |||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  12738669 aacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 12801592 - 12801403
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12801592 aattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgtt 12801493  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||   |||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  12801492 aacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 12801403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 42471577 - 42471793
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||| |||| | |||||||||||||||| |||||||| |||||||| ||||| |||||    
T  42471577 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaatttacaaaatgtcaatcaaattagtccctctgttaaattggt 42471676  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| ||| |||| ||| |||||||||||||    
T  42471677 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggactaaattgatggatttacacaaaatttc 42471776  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  42471777 caaggaccaaattgatg 42471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 8541328 - 8541125
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | || ||| ||||| |||||||||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8541328 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctg 8541229  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    ||||||||||||| ||||||||||||| ||| |||| ||||||||||| |||||||| |||||||||||||||| |||||||| |||| |||||| ||||    
T  8541228 ttaacggaggtgatgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcagggaccaaattgattgatttacagaaaattgccaa 8541129  T
Q  204 ggac 207  Q
    ||||    
T  8541128 ggac 8541125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 30463950 - 30464145
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  30463950 tccctgaattttgcgaaatatctatttagtccctgaatttacaaaatatcaatcaaatcagtccctctgttaagttggtctgtttacggaggtgacgtgt 30464049  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||| |||||||| || ||||||||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||    
T  30464050 aacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggaccaaattgatg 30464145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 28822129 - 28821946
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||  | | || |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28822129 tccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaagtgacgtgt 28822030  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaagg 205  Q
    ||||||||| ||| |||| |||||||| || ||||| || |||||||||||||||| |||||||| |||| |||||| ||||||    
T  28822029 aacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagggaccaaattgattgatttacagaaaattgccaagg 28821946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 32134287 - 32134482
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctc-----cgttaagttggtctgttaacggaggtgacgtgta 122  Q
    |||||||  ||||||| | |||||||||||||||| ||||||| |||||||||||||  ||      |||||||||||||||||||||||||||||||||    
T  32134287 aattttgtaaaatatctatttagtccctgaatttataaaatgtcaatcaaatcagtctatctgttaagttaagttggtctgttaacggaggtgacgtgta 32134386  T
Q  123 acgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatga 218  Q
    |||||||| ||| |||||||||| ||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  32134387 acgttaacctcttacaaagcttatcacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 32134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 34328860 - 34328674
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||| | | || |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  34328860 aattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcgctccgttaagttggtctgttaacggtggtgacgtgtaacgtt 34328761  T
Q  128 aacatctgacaa----agcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaa 211  Q
    ||| ||| ||||    |||||||||||| ||||| ||||||||||||||||||| |||||||| || |  |||||| |||||||||||    
T  34328760 aacctcttacaaggctagcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttaga-gaaattttcaaggaccaaa 34328674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 41493899 - 41494045
Alignment:
Q  27 aaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    |||||||| |||||||| | ||||||| ||||| | |||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||||||| |||    
T  41493899 aaattttgtgaaatatctatttagtccatgaatattcaaaatgtcaatcaaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgt 41493998  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggac 173  Q
    ||||  || |||| ||| ||||| | ||||||||| |||||| ||||    
T  41493999 taactgcttacaaggctcaccacatcagatgtcacacaagcatggac 41494045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 24539933 - 24540007
Alignment:
Q  143 ttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 24540007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 27077477 - 27077371
Alignment:
Q  51 tccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacg 150  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||  |||||| ||||||||||||||  |||||| ||| |||| |||| ||| |    
T  27077477 tccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtgacgtgtactgttaacctctcacaaggcttgccatg 27077378  T
Q  151 ttagatg 157  Q
    | |||||    
T  27077377 tcagatg 27077371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24541307 - 24541247
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  24541307 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29621876 - 29621786
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  29621876 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 29621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40780579 - 40780669
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||   ||| ||  |||||||||||||||||||    
T  40780579 ttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgt 40780669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 17577792 - 17577745
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  17577792 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 17577745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24539994 - 24540041
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  24539994 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 24540041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 19998438 - 19998381
Alignment:
Q  65 aaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgta 122  Q
    |||| ||||||||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  19998438 aaatataaatcaaatcggtccctccgttaagttggcatgttgacggaggtgatgtgta 19998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42473702 - 42473642
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||| ||||| |||| | |||||||||||| ||||||||||||||    
T  42473702 ttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 42473642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 1344849 - 1344786
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    |||||| |||||||||||| |||||| |||||||  ||||||| |||||| | |||||||||||    
T  1344849 aattttacgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaatttagtccctccgt 1344786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 2181591 - 2181540
Alignment:
Q  166 gcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||||| ||||| || |||| |||||| ||||||||||||||||||    
T  2181591 gcagggaccaaattgattaatttacagaaaattgccaaggaccaaattgatg 2181540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 43492176 - 43492133
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||||||||||||||| | |||||||||||||||    
T  43492176 ttcatccctgaattttgcgaaatatctatttagtccctgaattt 43492133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 21842848 - 21842802
Alignment:
Q  171 gaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||| |||| ||| |||||||||||| |||||||||||||||||    
T  21842848 gaccaaattgatggatttacacaaaattttcaaggaccaaattgatg 21842802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 43318137 - 43318095
Alignment:
Q  19 tcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| |||| ||||||||||||| |||||||||||||||    
T  43318137 tcatccctcaattatgcgaaatatcaacttagtccctgaattt 43318095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17574350 - 17574407
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||| | || ||| ||||| |||||||||||||||| | |||||||||||||||    
T  17574350 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2854421 - 2854362
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||   |||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  2854421 ttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattt 2854362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 35403676 - 35403463
Alignment:
Q  4 aaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctg 103  Q
    |||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  35403676 aaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggtatg 35403577  T
Q  104 ttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaa 203  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||| ||    
T  35403576 ttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattggtttacacaaaatttcgaa 35403477  T
Q  204 ggaccaaattgatg 217  Q
    |||| |||||||||    
T  35403476 ggacgaaattgatg 35403463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20479779 - 20479563
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  20479779 ttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 20479680  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  20479679 ccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaatttt 20479580  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  20479579 gaaggacgaaattgatg 20479563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 35401998 - 35402214
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  35401998 ttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaaattggt 35402097  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| || | |||||||||||||||||||| || |||||||||||||    
T  35402098 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttatcacgtcagatgccatgtaagcagggaccaaactgattaatttacacaaaatttc 35402197  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  35402198 gaaggacgaaattgatg 35402214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 27664459 - 27664657
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||  ||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27664459 ttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 27664558  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaattt 199  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||    
T  27664559 atgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattaatttactcaaaattt 27664657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 78074 - 77858
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| | |||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  78074 ttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgccaatcaaatcagtccctccgttaagttggt 77975  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    |||||||| ||||| || |||||||||||| |  |||||||||||||| || |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  77974 ctgttaacagaggttacatgtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcagggaccaaactgattgatttacacaaaatttc 77875  T
Q  201 caaggaccaaattgatg 217  Q
    |||||||||||||||||    
T  77874 caaggaccaaattgatg 77858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 13169722 - 13169530
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13169722 tccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 13169623  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattg 214  Q
    ||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||| |||| ||||||||||    
T  13169622 aacgttaacctcttacatggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacataaaattgccaatgaccaaattg 13169530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 50 - 217
Target Start/End: Original strand, 29994955 - 29995122
Alignment:
Q  50 gtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccac 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  29994955 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccac 29995054  T
Q  150 gttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    || | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29995055 gtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 29995122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 37113987 - 37114186
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    ||||||||| |||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37113987 ttcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 37114086  T
Q  118 gtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||| ||||| ||| |||| ||||||||||| ||||| ||||||||||||||||||| |||||||| |||| |||||| |||| || ||||||||||    
T  37114087 gtgtaacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgccaatgatcaaattgatg 37114186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 39857695 - 39857890
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39857695 tccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgt 39857794  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||  ||||||||||| ||||||||||||| ||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  39857795 aacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagggaccaaattgattgatttacataaaattgccaaggaccaaattgatg 39857890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 47384350 - 47384538
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47384350 aattttgcgaaatatctaattagtccccgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacatgtaacgtt 47384449  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||| ||| |||| ||||||||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||  ||||||||||||||||    
T  47384450 aacctcttacaaggcttaccacgtcagatgtcacgcaagcagtgaccaaattgattgatttacataaaattgtcaaggaccaaattgat 47384538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 35691480 - 35691672
Alignment:
Q  25 ctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaac 124  Q
    ||||||||||||||||| | | || |||| |||||||||||||||| |||||||||||||||| |  ||| |||||||||||||||||||| ||||||||    
T  35691480 ctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaac 35691579  T
Q  125 gttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  35691580 gttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 35691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 6605430 - 6605241
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  6605430 aattttgcgaaatagctatttagtccctgaatttacaaaatgccaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgtt 6605331  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||| ||||||||||| ||||| ||| ||||||||||| ||| |||||||| |||| ||||||  |||||||||||||||||    
T  6605330 aacctcttacaaggcttaccacgtcagatgccacacaagcagggactaaattgattgatttacagaaaattgtcaaggaccaaattgatg 6605241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 24226637 - 24226826
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24226637 aattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 24226736  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
     || ||| |||| ||||||||||| |||| |||| ||||||||||||||| |||||||| || | ||||||  |||||||||||||||||    
T  24226737 gacctcttacaaggcttaccacgtcagatatcacacaagcagggaccaaattgattgatttagagaaaattgtcaaggaccaaattgatg 24226826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 34775054 - 34775243
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||| | | |||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34775054 aattttgcaaaatagctatttagtccctgaatttacaaaatatcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgtt 34775153  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||| ||| |||   |||||||||| ||||| ||||||||||||||||||| |||||||| |||| ||||||  ||||||| |||||||||    
T  34775154 aacctcttacatgacttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggactaaattgatg 34775243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 48227974 - 48227820
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  48227974 aattttgcgaaatatctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgtt 48227875  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    ||| ||| |||| ||||||||||| ||||| ||||||||||||||||||| ||||    
T  48227874 aacctcttacaatgcttaccacgtcagatgccacgcaagcagggaccaaattgat 48227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 45361290 - 45361155
Alignment:
Q  47 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttac 146  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||    
T  45361290 ttagtccttgaacttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttac 45361191  T
Q  147 cacgttagatgtcacgcaagcagggaccaaactgat 182  Q
    ||||| ||||||||||||||||||||||||| ||||    
T  45361190 cacgtcagatgtcacgcaagcagggaccaaattgat 45361155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 46437163 - 46437305
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||||||||| | | || |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46437163 aattttgcgaaatagctattttgtccttgaatttacaaaatgtcaaccaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 46437262  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagg 170  Q
    ||| ||| |||||||||||||||| ||||| |||||| |||||    
T  46437263 aacctcttacaaagcttaccacgtcagatgccacgcaggcagg 46437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 37791700 - 37791898
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    |||||||| ||||||||| ||||||| | ||||||||| |||||  ||||||| |||||||||| ||| ||| |||||||||  ||||||||||||||||    
T  37791700 ttcatccccaaattttgccaaatatctatttagtccctaaatttttaaaatgtcaatcaaatcaatccatccattaagttggcatgttaacggaggtgac 37791799  T
Q  118 gtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
    ||||| |||||||  || |||| ||||||||||| ||||| || ||| |||||||||||| |||||||| |||| |||||| ||||| ||||| |||||    
T  37791800 gtgtaccgttaaccacttacaaggcttaccacgtcagatgccatgcaggcagggaccaaattgattgatttacaaaaaattgccaagaaccaacttgat 37791898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 13039681 - 13039536
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    |||||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||||||| |  |||||||||| |||||||| |||||||||| |    
T  13039681 tccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatcagtccatatgttaagttggcctgttaacagaggtgacgttt 13039582  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagc 167  Q
    | |||||||  || ||||  ||||||||||||||||||||||||||    
T  13039581 accgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 22211795 - 22211617
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccg-ttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    |||||||| ||||| | | || ||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  22211795 aattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgt 22211696  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| |||            || ||||||||||||||||||| | |||||| |||| |||||| ||||||||||||||||||    
T  22211695 taacctcttacaaggct------------tgccacgcaagcagggaccaaattaattgatttacagaaaattgccaaggaccaaattgatg 22211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 22155880 - 22155706
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccg-ttaagttggtctgttaacggaggtgacgtgtaacgt 126  Q
    |||||||| ||||| | | || ||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  22155880 aattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgt 22155781  T
Q  127 taacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaatt 213  Q
    |||| ||| |||| |||            || ||||||||||||||||||| | |||||| |||| |||||| ||||||||||||||    
T  22155780 taacctcttacaaggct------------tgccacgcaagcagggaccaaattaattgatttacagaaaattgccaaggaccaaatt 22155706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 23904639 - 23904842
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||||| ||||| | | ||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||||    
T  23904639 aattttgcaaaatagctatttagtccatgaatttacaaaatgtcaatcaaatcagtccctccattaagttagtccgttaaggaaggtgacgtgtaacgtt 23904738  T
Q  128 aacatctgacaaagc--------------ttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaatt 213  Q
    ||| ||| |||| ||              ||||||||| ||||||||||||||||||||||||| |||||||| || | ||||||| |||||||||||||    
T  23904739 aacctcttacaaggctcctcttacaaggtttaccacgtcagatgtcacgcaagcagggaccaaattgattgatttatagaaaattt-caaggaccaaatt 23904837  T
Q  214 gatga 218  Q
    |||||    
T  23904838 gatga 23904842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 38472369 - 38472505
Alignment:
Q  81 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactg 180  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||| | ||| ||||||| ||| ||||||| ||    
T  38472369 agtctctctgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattg 38472468  T
Q  181 attgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||| |||| ||||||  |||||||||||||||||    
T  38472469 attgatttacagaaaattgtcaaggaccaaattgatg 38472505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 38549597 - 38549714
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| ||||||| |||||||| | ||| |||  |||||||||||||||  ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  38549597 tccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtccatcaaatcagtcccttcgttaagttggtctgttaacgaaggtgacgtgt 38549696  T
Q  122 aacgttaacatctgacaa 139  Q
    | ||||||| ||| ||||    
T  38549697 accgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 56359 - 56419
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  56359 ttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 56419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27666160 - 27666070
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||   ||| ||  |||||||| ||||||||||    
T  27666160 ttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgt 27666070  T

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Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 48311776 - 48311672
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgac 117  Q
    ||||||| ||||||||||||||| || ||||  |||||||||||| ||||||  ||||||||  |||| |||||||||||||  ||||||  ||||||||    
T  48311776 ttcatccttaaattttgcgaaatgtctaattcatccctgaatttataaaatggcaatcaaatttgtccgtccgttaagttgggttgttaagagaggtgac 48311677  T
Q  118 gtgta 122  Q
     ||||    
T  48311676 atgta 48311672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20478071 - 20478161
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 91  Q
    ||||||||||| | |||||| | ||| |||||| |||||||||||||||||||||||||||   | | ||  |||||||||||||||||||    
T  20478071 ttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 20478161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 29995109 - 29995156
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  29995109 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 29995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 34785140 - 34785055
Alignment:
Q  35 cgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtg 120  Q
    |||||||||||| ||||||||||||||  ||||||| |||||| | |||||||||||  | ||||  ||||||||| | |||||||    
T  34785140 cgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtg 34785055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29996609 - 29996549
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||||||||   |||||  ||||| |||||||||||||||||||||| |||||||||||    
T  29996609 ttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2167525 - 2167568
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  2167525 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 2167568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33038875 - 33038832
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  33038875 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 33038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 35403476 - 35403429
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  35403476 ggacgaaattgatggatttacacaaaatttccaaggaccaaattgatg 35403429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38613559 - 38613516
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  38613559 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 38613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 46437825 - 46437880
Alignment:
Q  162 gcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||||||||||| |||||||| |||  |||||| | ||||||||||||||||    
T  46437825 gcaagcagggaccaaattgattgatttactgaaaattgcaaaggaccaaattgatg 46437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47341764 - 47341721
Alignment:
Q  18 ttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||    
T  47341764 ttcatccctcaattatgcgaaatatcaacttagtccctgaattt 47341721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 6602384 - 6602424
Alignment:
Q  21 atccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    |||||| |||||||||||||||| | |||||||||||||||    
T  6602384 atccctgaattttgcgaaatatctatttagtccctgaattt 6602424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 54318 - 54102
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    |||||||||||   |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  54318 ttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaatttggt 54219  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    | ||||||||||||||||||| |||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||     
T  54218 ccgttaacggaggtgacgtgtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcagggaccaaactgattgatttacacaaaatttt 54119  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  54118 gaaggacgaaattgatg 54102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 1011 - 1227
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| |||||||| ||||| |||| | |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  1011 ttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgttaaattggt 1110  T
Q  101 ctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttc 200  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||||||| |||| ||| |||||||||||||    
T  1111 ctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaaatgccacgcaagcagggaccaaattgatggatttacacaaaatttc 1210  T
Q  201 caaggaccaaattgatg 217  Q
     |||||| |||||||||    
T  1211 gaaggactaaattgatg 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 1594 - 1401
Alignment:
Q  22 tccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgt 121  Q
    ||||| |||||||  ||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1594 tccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgt 1497  T
Q  122 aacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    ||||||||| ||| |||| ||||||||||| ||||||||||||||||| ||||||| |||||||| |||| |||||| ||||||||||||||||||    
T  1496 aacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagagaccaaattgattgatttacagaaaattgccaaggaccaaattgatg 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 121; Significance: 4e-62; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 7217 - 7081
Alignment:
Q  81 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactg 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  7217 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactg 7118  T
Q  181 attgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7117 attgatttacacaaaatttccaaggaccaaattgatg 7081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 14403 - 14293
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggt 100  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14403 ttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggt 14304  T
Q  101 ctgttaacgga 111  Q
    |||||||||||    
T  14303 ctgttaacgga 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3323 - 3383
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||  ||||| ||||||||||||||||||||||||||||||||||    
T  3323 ttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4495 - 4555
Alignment:
Q  1 ttgaaaaatcgccaaatttcatccctaaattttgcgaaatatcaaattagtccctgaattt 61  Q
    ||||||||||| | |||||  ||||| ||||||||||||||||||||||||||||||||||    
T  4495 ttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 7094 - 7047
Alignment:
Q  170 ggaccaaactgattgatctacacaaaatttccaaggaccaaattgatg 217  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  7094 ggaccaaattgatggatttacacaaaatttccaaggaccaaattgatg 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 106724 - 106903
Alignment:
Q  28 aattttgcgaaatatcaaattagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgtt 127  Q
    |||||| ||||||||| | |||||  | ||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||| ||||    
T  106724 aattttacgaaatatctatttagtttccgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgtt---------gacgtgtaccgtt 106814  T
Q  128 aacatctgacaaagcttaccacgttagatgtcacgcaagcagggaccaaactgattgatctacacaaaatttccaaggaccaaattgat 216  Q
     || ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||  ||||||  ||||||||||||||||    
T  106815 gacctcttacaaggcttaccacgttagatgtcacgcaagcagggaccaaattgattgatttacgtaaaattgtcaaggaccaaattgat 106903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 63735 - 63617
Alignment:
Q  47 ttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacatctgacaaagcttac 146  Q
    ||||||||  |||||| ||||| | || ||||||||||  || |||||||||||| |||||| || ||||| || |  |||||| ||| |||| ||||||    
T  63735 ttagtccccaaatttagaaaatctcaaccaaatcagtcagtctgttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttac 63636  T
Q  147 cacgttagatgtcacgcaa 165  Q
    ||||| |||||||||||||    
T  63635 cacgtcagatgtcacgcaa 63617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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