View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18188_low_21 (Length: 207)
Name: NF18188_low_21
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18188_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 10491587 - 10491766
Alignment:
| Q |
10 |
catcatcactgtttcccatgagataagcaccaagattgagtcaaatacttcctgagaaattattcgactgcgctaaacaaaaggcatgtaaacagtcatc |
109 |
Q |
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| T |
10491587 |
catcctcactgtttcccatgagataagcaccaagattgagtcaaatacttcctgagaaattattcgactgcgctaaacaaaaggcatgtaaacagtcatc |
10491686 |
T |
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| Q |
110 |
agctatcaaacgagaaagataaccacaaagcaaacaataaaaaatcaacataaaggaagaacaattcaaacatttaaaat |
189 |
Q |
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| T |
10491687 |
agctatcaaacgagaaagataaccacaaagcaaacaataaaaaatcagcataaaggaagaacaattcaaacatttaaaat |
10491766 |
T |
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