View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18188_low_3 (Length: 327)

Name: NF18188_low_3
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18188_low_3
NF18188_low_3
[»] chr8 (25 HSPs)
chr8 (1-327)||(22907253-22907580)
chr8 (201-327)||(5238184-5238311)
chr8 (201-327)||(24661287-24661414)
chr8 (201-327)||(43685643-43685770)
chr8 (75-326)||(17345540-17345792)
chr8 (79-326)||(24548956-24549205)
chr8 (79-327)||(16193755-16194005)
chr8 (79-326)||(6774286-6774535)
chr8 (72-323)||(43373511-43373761)
chr8 (72-327)||(16405014-16405268)
chr8 (62-327)||(24928830-24929096)
chr8 (72-326)||(21844600-21844856)
chr8 (72-326)||(21851993-21852249)
chr8 (72-326)||(30120690-30120946)
chr8 (72-291)||(222754-222975)
chr8 (72-291)||(736377-736598)
chr8 (72-291)||(860272-860493)
chr8 (1-46)||(5238152-5238197)
chr8 (1-46)||(24661401-24661446)
chr8 (1-46)||(43685611-43685656)
chr8 (62-216)||(23837154-23837308)
chr8 (64-145)||(13662481-13662561)
chr8 (76-125)||(16674624-16674672)
chr8 (61-98)||(41246613-41246650)
chr8 (234-326)||(16674420-16674512)
[»] chr4 (25 HSPs)
chr4 (1-327)||(26680097-26680424)
chr4 (76-327)||(15675128-15675381)
chr4 (79-327)||(31115603-31115853)
chr4 (61-327)||(13246386-13246654)
chr4 (61-327)||(54118283-54118551)
chr4 (201-327)||(10488659-10488786)
chr4 (201-327)||(16327965-16328092)
chr4 (76-327)||(10104289-10104523)
chr4 (72-326)||(10644187-10644443)
chr4 (72-203)||(111362-111493)
chr4 (234-327)||(122020-122113)
chr4 (72-326)||(47357622-47357878)
chr4 (234-327)||(13048260-13048353)
chr4 (1-46)||(10488627-10488672)
chr4 (1-46)||(16328079-16328124)
chr4 (75-150)||(7849970-7850044)
chr4 (122-216)||(41166083-41166177)
chr4 (72-216)||(15044794-15044938)
chr4 (169-326)||(40885594-40885753)
chr4 (61-93)||(44055870-44055902)
chr4 (101-216)||(8374504-8374619)
chr4 (72-216)||(15109486-15109630)
chr4 (101-222)||(17145796-17145917)
chr4 (152-216)||(13809647-13809711)
chr4 (105-216)||(52265645-52265757)
[»] chr3 (30 HSPs)
chr3 (1-327)||(16744154-16744481)
chr3 (78-327)||(17912521-17912771)
chr3 (61-327)||(15859063-15859331)
chr3 (72-327)||(14842600-14842856)
chr3 (72-327)||(15936666-15936922)
chr3 (72-327)||(2049777-2050034)
chr3 (72-327)||(15938508-15938764)
chr3 (61-327)||(51158057-51158325)
chr3 (201-327)||(2449277-2449404)
chr3 (72-327)||(12030186-12030443)
chr3 (62-327)||(13838852-13839118)
chr3 (79-322)||(15614808-15615053)
chr3 (16-146)||(15468555-15468686)
chr3 (16-146)||(22275119-22275250)
chr3 (79-214)||(47984624-47984759)
chr3 (79-214)||(48003198-48003333)
chr3 (79-214)||(47993911-47994046)
chr3 (79-214)||(48012484-48012619)
chr3 (64-326)||(16821099-16821363)
chr3 (72-326)||(55316187-55316443)
chr3 (72-326)||(41270043-41270299)
chr3 (1-46)||(2449391-2449436)
chr3 (72-124)||(19231945-19231997)
chr3 (234-321)||(13975766-13975853)
chr3 (234-321)||(45860937-45861024)
chr3 (72-321)||(13954934-13955185)
chr3 (72-146)||(13975944-13976017)
chr3 (72-134)||(45860773-45860834)
chr3 (61-93)||(22144532-22144564)
chr3 (104-222)||(12264932-12265050)
[»] chr7 (25 HSPs)
chr7 (1-327)||(7292913-7293240)
chr7 (72-327)||(11580778-11581035)
chr7 (60-327)||(13037053-13037322)
chr7 (79-326)||(47481071-47481320)
chr7 (72-323)||(36052634-36052884)
chr7 (75-326)||(16478990-16479244)
chr7 (72-327)||(18253874-18254130)
chr7 (201-327)||(11516324-11516451)
chr7 (201-327)||(15441603-15441730)
chr7 (201-327)||(30262168-30262295)
chr7 (72-327)||(16211733-16211990)
chr7 (79-326)||(13320988-13321239)
chr7 (72-327)||(3059933-3060190)
chr7 (72-326)||(13572644-13572900)
chr7 (72-326)||(2437425-2437681)
chr7 (72-326)||(10989378-10989633)
chr7 (90-326)||(13911052-13911292)
chr7 (75-326)||(296006-296257)
chr7 (1-46)||(15441717-15441762)
chr7 (1-46)||(30262282-30262327)
chr7 (1-46)||(11516292-11516337)
chr7 (234-327)||(25292377-25292470)
chr7 (61-93)||(15822691-15822723)
chr7 (72-146)||(25292560-25292633)
chr7 (61-216)||(17224075-17224230)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-327)||(37105-37432)
[»] scaffold0195 (2 HSPs)
scaffold0195 (72-327)||(19173-19430)
scaffold0195 (72-327)||(21257-21514)
[»] chr5 (29 HSPs)
chr5 (80-327)||(18531106-18531355)
chr5 (76-327)||(22053872-22054125)
chr5 (72-327)||(23506932-23507189)
chr5 (61-327)||(27182586-27182854)
chr5 (75-326)||(34939248-34939500)
chr5 (201-327)||(20623066-20623193)
chr5 (201-327)||(21233567-21233694)
chr5 (204-327)||(37052844-37052968)
chr5 (201-327)||(16536294-16536421)
chr5 (201-327)||(25900445-25900571)
chr5 (72-326)||(18778020-18778276)
chr5 (72-326)||(22366509-22366765)
chr5 (72-326)||(25426596-25426852)
chr5 (72-326)||(12342-12598)
chr5 (62-146)||(17471803-17471887)
chr5 (91-326)||(4200013-4200251)
chr5 (72-326)||(19499867-19500123)
chr5 (72-326)||(21073623-21073879)
chr5 (72-326)||(27009809-27010065)
chr5 (72-326)||(43443423-43443679)
chr5 (234-326)||(29188312-29188404)
chr5 (79-152)||(29190479-29190552)
chr5 (1-46)||(20623034-20623079)
chr5 (1-46)||(21233681-21233726)
chr5 (1-46)||(25900558-25900603)
chr5 (1-46)||(16536262-16536307)
chr5 (1-46)||(37052809-37052854)
chr5 (104-216)||(23493916-23494029)
chr5 (152-216)||(7728466-7728530)
[»] scaffold0025 (2 HSPs)
scaffold0025 (76-327)||(8820-9073)
scaffold0025 (72-327)||(148688-148945)
[»] chr2 (25 HSPs)
chr2 (61-327)||(19794743-19795011)
chr2 (72-327)||(36982480-36982737)
chr2 (76-327)||(24341428-24341681)
chr2 (72-327)||(8891209-8891466)
chr2 (79-326)||(25265430-25265679)
chr2 (201-327)||(19689440-19689567)
chr2 (201-327)||(23820168-23820295)
chr2 (75-316)||(7507894-7508138)
chr2 (201-327)||(14906479-14906606)
chr2 (72-327)||(462706-462962)
chr2 (201-327)||(20015108-20015235)
chr2 (72-327)||(43642996-43643250)
chr2 (72-327)||(20627352-20627609)
chr2 (72-326)||(19886689-19886945)
chr2 (1-46)||(19689554-19689599)
chr2 (234-321)||(17396697-17396784)
chr2 (1-46)||(14906593-14906638)
chr2 (1-46)||(20015076-20015121)
chr2 (1-46)||(23820136-23820181)
chr2 (72-134)||(17396887-17396948)
chr2 (101-183)||(19669279-19669362)
chr2 (122-182)||(9636761-9636821)
chr2 (104-183)||(19666525-19666605)
chr2 (138-182)||(24884718-24884762)
chr2 (61-93)||(32465813-32465845)
[»] scaffold0077 (1 HSPs)
scaffold0077 (72-327)||(36952-37209)
[»] chr6 (18 HSPs)
chr6 (61-327)||(23153403-23153671)
chr6 (79-326)||(14626158-14626407)
chr6 (72-323)||(35009482-35009735)
chr6 (75-326)||(1657788-1658040)
chr6 (75-326)||(15862443-15862694)
chr6 (79-323)||(1650136-1650382)
chr6 (75-208)||(27740808-27740941)
chr6 (72-326)||(25175531-25175787)
chr6 (72-326)||(27654011-27654267)
chr6 (61-215)||(18381821-18381975)
chr6 (72-125)||(16825986-16826038)
chr6 (86-192)||(22361926-22362032)
chr6 (283-326)||(27751605-27751648)
chr6 (61-90)||(32898745-32898774)
chr6 (61-216)||(21623123-21623278)
chr6 (152-216)||(25367374-25367438)
chr6 (104-183)||(33324690-33324770)
chr6 (104-183)||(35136182-35136262)
[»] scaffold0266 (2 HSPs)
scaffold0266 (72-327)||(1091-1348)
scaffold0266 (72-327)||(3621-3877)
[»] chr1 (19 HSPs)
chr1 (72-327)||(20445646-20445903)
chr1 (72-327)||(20531411-20531668)
chr1 (61-327)||(20893665-20893933)
chr1 (72-327)||(20931312-20931569)
chr1 (201-327)||(51452589-51452716)
chr1 (75-327)||(41394191-41394446)
chr1 (72-327)||(20913004-20913254)
chr1 (72-316)||(22227777-22228022)
chr1 (72-316)||(22232474-22232719)
chr1 (79-326)||(2116228-2116478)
chr1 (72-327)||(37844489-37844746)
chr1 (234-323)||(45051554-45051643)
chr1 (1-46)||(51452557-51452602)
chr1 (79-159)||(45051416-45051496)
chr1 (72-326)||(18601146-18601402)
chr1 (72-326)||(5072416-5072672)
chr1 (62-93)||(49967607-49967638)
chr1 (101-182)||(20254308-20254389)
chr1 (104-183)||(22143531-22143611)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-327)||(48155-48411)
[»] scaffold0026 (2 HSPs)
scaffold0026 (72-327)||(107715-107971)
scaffold0026 (72-297)||(64585-64812)
[»] scaffold0023 (2 HSPs)
scaffold0023 (72-327)||(48565-48822)
scaffold0023 (76-326)||(36065-36317)
[»] scaffold0011 (3 HSPs)
scaffold0011 (72-327)||(123203-123460)
scaffold0011 (61-93)||(255074-255106)
scaffold0011 (61-93)||(261680-261712)
[»] scaffold0175 (1 HSPs)
scaffold0175 (72-327)||(995-1250)
[»] scaffold0125 (1 HSPs)
scaffold0125 (79-326)||(41622-41871)
[»] scaffold0215 (2 HSPs)
scaffold0215 (79-326)||(9377-9626)
scaffold0215 (79-326)||(16275-16524)
[»] scaffold0141 (4 HSPs)
scaffold0141 (201-327)||(22637-22764)
scaffold0141 (201-327)||(26892-27019)
scaffold0141 (1-46)||(22605-22650)
scaffold0141 (1-46)||(26860-26905)
[»] scaffold0124 (2 HSPs)
scaffold0124 (201-327)||(1621-1748)
scaffold0124 (1-46)||(1735-1780)
[»] scaffold0302 (1 HSPs)
scaffold0302 (72-327)||(12083-12337)
[»] scaffold0008 (3 HSPs)
scaffold0008 (72-327)||(128208-128464)
scaffold0008 (91-326)||(31703-31942)
scaffold0008 (65-93)||(22650-22678)
[»] scaffold0413 (1 HSPs)
scaffold0413 (72-327)||(6103-6358)
[»] scaffold0132 (1 HSPs)
scaffold0132 (79-326)||(13480-13729)
[»] scaffold0498 (1 HSPs)
scaffold0498 (72-326)||(8846-9101)
[»] scaffold0106 (1 HSPs)
scaffold0106 (61-327)||(41686-41953)
[»] scaffold0075 (1 HSPs)
scaffold0075 (75-326)||(34500-34755)
[»] scaffold0622 (1 HSPs)
scaffold0622 (61-203)||(9338-9480)
[»] scaffold0529 (1 HSPs)
scaffold0529 (79-326)||(2936-3186)
[»] scaffold0012 (1 HSPs)
scaffold0012 (72-327)||(247481-247738)
[»] scaffold0218 (1 HSPs)
scaffold0218 (72-327)||(5100-5356)
[»] scaffold0022 (1 HSPs)
scaffold0022 (72-316)||(5254-5498)
[»] scaffold1542 (1 HSPs)
scaffold1542 (74-327)||(573-828)
[»] scaffold0369 (1 HSPs)
scaffold0369 (72-316)||(3690-3936)
[»] scaffold0001 (3 HSPs)
scaffold0001 (62-327)||(171863-172129)
scaffold0001 (62-327)||(177566-177832)
scaffold0001 (61-93)||(70882-70914)
[»] scaffold0162 (2 HSPs)
scaffold0162 (79-326)||(8220-8466)
scaffold0162 (72-327)||(26454-26710)
[»] scaffold0009 (1 HSPs)
scaffold0009 (62-327)||(271983-272249)
[»] scaffold0076 (1 HSPs)
scaffold0076 (72-326)||(42965-43221)
[»] scaffold0139 (2 HSPs)
scaffold0139 (72-326)||(14089-14344)
scaffold0139 (72-326)||(21144-21399)
[»] scaffold0116 (1 HSPs)
scaffold0116 (72-326)||(3-259)
[»] scaffold0104 (1 HSPs)
scaffold0104 (72-194)||(48482-48603)
[»] scaffold0772 (1 HSPs)
scaffold0772 (234-326)||(5660-5752)
[»] scaffold0420 (1 HSPs)
scaffold0420 (234-326)||(13353-13445)
[»] scaffold1560 (1 HSPs)
scaffold1560 (72-194)||(26-147)
[»] scaffold0066 (1 HSPs)
scaffold0066 (104-316)||(54415-54630)
[»] scaffold0018 (1 HSPs)
scaffold0018 (234-327)||(51221-51314)
[»] scaffold0361 (1 HSPs)
scaffold0361 (80-159)||(3183-3262)
[»] scaffold1404 (1 HSPs)
scaffold1404 (72-125)||(1815-1867)
[»] scaffold0028 (1 HSPs)
scaffold0028 (234-327)||(89493-89586)
[»] scaffold1711 (1 HSPs)
scaffold1711 (234-326)||(1332-1424)
[»] scaffold0053 (1 HSPs)
scaffold0053 (61-216)||(76984-77139)
[»] scaffold0021 (1 HSPs)
scaffold0021 (61-98)||(132505-132542)
[»] scaffold0006 (1 HSPs)
scaffold0006 (81-216)||(197390-197525)
[»] scaffold0032 (1 HSPs)
scaffold0032 (104-182)||(104793-104872)
[»] scaffold0389 (1 HSPs)
scaffold0389 (86-183)||(10642-10739)
[»] scaffold0970 (1 HSPs)
scaffold0970 (122-183)||(2471-2532)
[»] scaffold0240 (1 HSPs)
scaffold0240 (61-90)||(7522-7551)
[»] scaffold0044 (1 HSPs)
scaffold0044 (61-90)||(38253-38282)
[»] scaffold0700 (1 HSPs)
scaffold0700 (129-193)||(2548-2612)
[»] scaffold0123 (1 HSPs)
scaffold0123 (104-183)||(8007-8087)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-179)||(116687-116806)


Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-157; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 22907580 - 22907253
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
22907580 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaacaattcaaa 22907481  T
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22907480 ttctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 22907381  T
201 aattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
22907380 aattcaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 22907281  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
22907280 tattatcaattcatgcatacaaacatat 22907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 5238184 - 5238311
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
5238184 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 5238283  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
5238284 tattatcaattcatgcatacaaacatat 5238311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 24661414 - 24661287
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
24661414 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 24661315  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
24661314 tattatcaattcatgcatacaaacatat 24661287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 43685643 - 43685770
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
43685643 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 43685742  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
43685743 tattatcaattcatgcatacaaacatat 43685770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 326
Target Start/End: Original strand, 17345540 - 17345792
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
17345540 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 17345639  T
175 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 272  Q
     ||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
17345640 tatcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 17345738  T
273 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||  || | ||||||||||||||| |||| ||||||||||||||| |||||||    
17345739 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacata 17345792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 24548956 - 24549205
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
24548956 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 24549055  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
24549056 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 24549155  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
24549156 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 24549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 327
Target Start/End: Complemental strand, 16194005 - 16193755
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||  |||||||  |||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | | ||||||    
16194005 aaaacaccaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 16193906  T
179 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    ||||| |||||||||| | ||||| | ||| ||||  || |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
16193905 aattgaacaagaatcaaatctcaaattaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 16193806  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||| |  |||||||||||||| |||| ||||||||||||||||||||||||    
16193805 aatttccccaacaatcatacaattatcatcaattcatgcatacaaacatat 16193755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 6774535 - 6774286
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||| ||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||    
6774535 aaaacaccaacaacaaatcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 6774436  T
179 aattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    |||||  ||||||||| | ||||| | ||| | ||| |  |||| |||| | |||  |||||||||||| ||||| |||||| ||||||||| ||||||     
6774435 aattgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgt 6774336  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
6774335 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 6774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 72 - 323
Target Start/End: Complemental strand, 43373761 - 43373511
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||   |||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
43373761 tttcaccaaaacaccaacaa---ttcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 43373665  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     | ||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
43373664 tagcatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 43373565  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 323  Q
    |||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||    
43373564 aacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaac 43373511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 16405268 - 16405014
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||| || |||||||| |  |||||||||||||| |||||| |||| || |||    
16405268 tttcatcaaaacaccaacaacatctcaaattatcatcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaa 16405169  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| ||||||||||||  |||||| |   ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | |||||     
16405168 taacatcaattgaacaagaatcatatgtcaattta---acaacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 16405072  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 16405014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 327
Target Start/End: Complemental strand, 24929096 - 24928830
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 161  Q
    ||||||| |||||||| ||| ||||||||||||| ||  || ||| || |||  |||||||||| |||||||| | ||||||||||||  |||||||| |    
24929096 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaa 24928998  T
162 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt-gcacaattttcataacttctcatttc 259  Q
    ||| || | | ||| ||||||| ||||||  |||| |||||| |||| ||||| |  | ||||||| | |||  |||||||||||| ||||| ||||||     
24928997 ttaacaaccataacctcaattgaacaagagacataactcaatccaaccacaacttagcgaaattcaccaattgagcacaattttcacaacttatcatttg 24928898  T
260 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
24928897 ttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 24928830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 21844856 - 21844600
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
21844856 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21844758  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||| ||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21844757 taacatcatttgaacaaaaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21844658  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| ||| | ||||||||||||||| | || |||||||||||||||||||||||    
21844657 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacata 21844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 21852249 - 21851993
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
21852249 tttcaccaaaacaccaaca-caattcaaattctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 21852151  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
21852150 taacatcatttgaacaagaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 21852051  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||  ||| | ||||||||||||||| | || |||||||||||||||||||||||    
21852050 aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacata 21851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 30120690 - 30120946
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
30120690 tttcaccaaaacaccaaca-caattcaaattatcatcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 30120788  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||||||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
30120789 taacatcaattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 30120888  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  || ||||||||||||||||||||    
30120889 gaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacata 30120946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 222975 - 222754
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
222975 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 222877  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
222876 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 222777  T
269 aaacatggaatctaaccaacaat 291  Q
     |||||| ||| | |||||||||    
222776 gaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 736598 - 736377
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
736598 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 736500  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
736499 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 736400  T
269 aaacatggaatctaaccaacaat 291  Q
     |||||| ||| | |||||||||    
736399 gaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 291
Target Start/End: Complemental strand, 860493 - 860272
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
860493 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 860395  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
860394 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 860295  T
269 aaacatggaatctaaccaacaat 291  Q
     |||||| ||| | |||||||||    
860294 gaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5238152 - 5238197
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
5238152 caatcataacatataatcatacactccatcataattcaacaacaac 5238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24661446 - 24661401
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
24661446 caatcataacatataatcatacactccatcataattcaacaacaac 24661401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43685611 - 43685656
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
43685611 caatcataacatataatcatacactccatcataattcaacaacaac 43685656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 23837154 - 23837308
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatct 160  Q
    ||||||| |||||||| ||| ||||| |||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||| ||||||||     
23837154 aattcaccaatttcacaaaaccaccaccaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
     |||||| ||||||||||||||| ||| || || || | ||||||||| |||||||    
23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat 23837308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 13662561 - 13662481
Alignment:
64 ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattca 145  Q
    ||||| |||||||| ||| |||||||||||||| |  || ||||||||||||||| | ||||||||||||||  ||||||||    
13662561 ttcaccaatttcacaaaaccaccaacaacaatttag-ttctcatcatcaatccataattatgtatacccaaatcatgattca 13662481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 16674672 - 16674624
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 125  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
16674672 accaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatg 16674624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 41246613 - 41246650
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattca 98  Q
    ||||||||||||||||||||||||||||||||| ||||    
41246613 caattcacaaatttcaccaaaacaccaacaacatttca 41246650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 16674512 - 16674420
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| |||||||    
16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacata 16674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 26680097 - 26680424
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
26680097 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatttcaccaaaacaccaacaacaattcaaa 26680196  T
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
26680197 ttctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 26680296  T
201 aattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |    
26680297 aattcaactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaat 26680396  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
26680397 tattatcaattcatgcatacaaacatat 26680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 76 - 327
Target Start/End: Complemental strand, 15675381 - 15675128
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| |||    
15675381 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataac 15675282  T
176 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 273  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
15675281 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 15675182  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    || ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
15675181 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 15675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 327
Target Start/End: Original strand, 31115603 - 31115853
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||| ||||||    
31115603 aaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatc 31115702  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    ||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  ||| |||||||| |||||| ||||| |||||| |  ||||||     
31115703 aattgaacatgaatcatatctcaattcaacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgt 31115802  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
31115803 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 31115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 61 - 327
Target Start/End: Original strand, 13246386 - 13246654
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
13246386 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 13246485  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
13246486 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 13246585  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| || |||||||||||||||||||||    
13246586 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatat 13246654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 54118551 - 54118283
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
54118551 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 54118452  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | ||||||||||| |||||||||||| || |||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||| ||    
54118451 attaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaatt 54118352  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
54118351 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 54118283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 10488659 - 10488786
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
10488659 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 10488758  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
10488759 tattatcaattcatgcatacaaacatat 10488786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 16328092 - 16327965
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
16328092 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16327993  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
16327992 tattatcaattcatgcatacaaacatat 16327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 76 - 327
Target Start/End: Complemental strand, 10104523 - 10104289
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||                   |||||||    
10104523 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaa-------------------caacaac 10104443  T
176 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 273  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
10104442 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 10104343  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    || ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
10104342 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 10104289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 10644187 - 10644443
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
10644187 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10644285  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||||||| ||| |||||| | ||||| ||||| |||||  | |  ||||||| | |||| |||||||  |||||||||  ||||| |||||||||    
10644286 taacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt 10644385  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | || |||||||||||| |||| |||||||||||||||||||||||    
10644386 gaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacata 10644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 111362 - 111493
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
111362 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 111461  T
172 caacatcaattgcacaagaatcatagctcaat 203  Q
     ||||||||||| |||||||||||| ||||||    
111462 taacatcaattgaacaagaatcataactcaat 111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 122020 - 122113
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 122113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 47357622 - 47357878
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||  ||||||| |||||||||||||||||||||  |||||||| | || |||||||||  | || ||| | || |||  |    
47357622 tttcaccaaaacaccaaca-cagctcaaattctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattca 47357720  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
47357721 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 47357820  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||| ||||||||||||||||    
47357821 gaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacata 47357878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 13048353 - 13048260
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| ||||||||||||||||||    
13048353 gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatat 13048260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10488627 - 10488672
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
10488627 caatcataacatataatcataccctccatcataattcaacaacaac 10488672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16328124 - 16328079
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
16328124 caatcataacatataatcataccctccatcataattcaacaacaac 16328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 7849970 - 7850044
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaac 150  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||| |||   |||||||||||||    
7849970 caccaaaacaccaaca-caattcaaattttcatcaccaattcatgattatgtatactcaagtcatgattcatcaac 7850044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 41166177 - 41166083
Alignment:
122 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    |||| |||||||| | ||||||||||||| ||||||||  |||||| ||||||||||||||| ||| || || |  | ||||||||| |||||||    
41166177 tatgaatacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat 41166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 15044794 - 15044938
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca 170  Q
    |||||||||| || ||||||||||| |  || ||||||||||  ||||| | ||| | |||||| | |||| |||||| | ||||||||  |||||| ||    
15044794 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaaca 15044892  T
171 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
15044893 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 40885753 - 40885594
Alignment:
169 caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- 265  Q
    ||||||||||||||| ||| |||||||| ||||||||||| | ||| |  |||| |||| | |||  ||| ||||| ||||||||  ||||| ||||||     
40885753 caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac 40885655  T
266 tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| |||||| ||| | |||||||| ||| || |||| | |||||||||||||||||||||    
40885654 tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacata 40885594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 44055870 - 44055902
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    |||||||||||||||||||||||||||||||||    
44055870 caattcacaaatttcaccaaaacaccaacaaca 44055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 8374504 - 8374619
Alignment:
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    ||||||||||||||| || | ||||||||||||| | || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
8374504 ttttcatcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 8374603  T
201 aattcaactacaacat 216  Q
    | |||||| |||||||    
8374604 atttcaacaacaacat 8374619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 15109630 - 15109486
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatca 170  Q
    |||||||||| || ||||||||||| |  || ||||||||||  ||||| | ||| | |||||| | |||| |||||| | |||||||   |||||| ||    
15109630 tttcaccaaagcaacaacaacaatttat-ttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaaca 15109532  T
171 acaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    ||||||||||||| ||| ||||| || | ||||||||| |||||||    
15109531 acaacatcaattgaacatgaatcttatcacaattcaacaacaacat 15109486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 17145917 - 17145796
Alignment:
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    |||||||||||||||| | | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||    
17145917 ttttcatcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctc 17145818  T
201 aattcaactacaacatgtcaaa 222  Q
    | |||||| ||||||| |||||    
17145817 atttcaacaacaacatatcaaa 17145796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 13809711 - 13809647
Alignment:
152 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    |||||||| ||||||| |||||||||||||||  || ||||| || | ||||||||| |||||||    
13809711 acaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacat 13809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 52265757 - 52265645
Alignment:
105 catcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 203  Q
    |||||||||  ||||||| ||| | |||||| | |||| ||||||||  ||| |||  |||||| ||||||||||||||| ||| ||||| || | ||||    
52265757 catcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 52265658  T
204 tcaactacaacat 216  Q
    ||||| |||||||    
52265657 tcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 16744481 - 16744154
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16744481 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 16744382  T
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
16744381 ttctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctc 16744282  T
201 aattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||    
16744281 aattcaactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacact 16744182  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||| ||||||||||||    
16744181 tattatcaattcatggatacaaacatat 16744154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 78 - 327
Target Start/End: Complemental strand, 17912771 - 17912521
Alignment:
78 caaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacat 177  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| |||||    
17912771 caaaacacccacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacat 17912672  T
178 caattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    | |||| ||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||     
17912671 cgattgaacatgaatcatagctcaattcaactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgt 17912572  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
17912571 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 17912521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 15859331 - 15859063
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||| | ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
15859331 caattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 15859232  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
15859231 attaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 15859132  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | ||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
15859131 gttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 15859063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 14842856 - 14842600
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| |    
14842856 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatcca 14842758  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||||||||| |||||| |||| ||||     
14842757 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttg 14842658  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| ||||  |||||||||||||||||||||||    
14842657 aacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatat 14842600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 15936922 - 15936666
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
15936922 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15936824  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | ||||| |||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15936823 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15936724  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
15936723 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 15936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 2049777 - 2050034
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     | ||||||||| |||| ||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| || || |||| | |||||||||     
2049877 tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttg 2049976  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||| ||||||||||||||    
2049977 aacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatat 2050034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 15938764 - 15938508
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
15938764 tttcaccaaaacaccaaca-caattcaaattttcagcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 15938666  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
15938665 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 15938566  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||  |||||||||||    
15938565 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatat 15938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 51158325 - 51158057
Alignment:
61 caattcacaaatttcaccaaaacacc-aacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||||||||| | ||||||||  |||||||  |||||||  |||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||    
51158325 caattcacaaattt-agcaaaacacttaacaacatctcaaattaacatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 51158227  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatt 257  Q
     |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |||| | |||  |||||||||||| ||||| |||||    
51158226 aattaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 51158127  T
258 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
51158126 tttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 51158057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 2449404 - 2449277
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
2449404 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 2449305  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
2449304 tattatcaattcatgcatacaaacatat 2449277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 12030443 - 12030186
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| |||| || | |    
12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     | ||||||||| |||||||||| |  |||| | ||| | ||| | |  ||||||| | |||  |||||| ||||| ||||| ||| || |||||||||     
12030343 tagcatcaattgaacaagaatcaaatatcaaattaacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttg 12030244  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
12030243 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 12030186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 62 - 327
Target Start/End: Original strand, 13838852 - 13839118
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 161  Q
    ||||||| |||||||| ||| ||||||||||||| ||  || ||| || |||  |||||||||| |||||||||| ||||||||||||| |||||||| |    
13838852 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa 13838950  T
162 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttc 259  Q
    ||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||     
13838951 ttaacagccataacatcaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttg 13839050  T
260 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||||||||||||||||    
13839051 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatat 13839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 322
Target Start/End: Original strand, 15614808 - 15615053
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
15614808 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 15614907  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    |||||  ||||||||| | | ||| | ||| | ||| | |  ||||||| | |||  |||| || |||| ||||| |||||| ||||||||| ||||||     
15614908 aattgagcaagaatcaaatcccaaattaacaataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgt 15615007  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaa 322  Q
    ||| | |||||||||| |||| |||| |||||||||||||||||||    
15615008 aatttcaccaacaatcctacaattatcatcaattcatgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 15468686 - 15468555
Alignment:
16 atcatacactccatcataattcaacaacaacttatcatatttcctcaatt-cacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat 114  Q
    |||||||| ||||||||  |||||||||||| | ||||| |||  ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
15468686 atcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaacaacaacaacaattcaaattctcatcatcaat 15468587  T
115 ccatgaatatgtatacccaaacgatgattcat 146  Q
     |||||||||| |||||||| | |||||||||    
15468586 tcatgaatatgcatacccaagcaatgattcat 15468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 22275119 - 22275250
Alignment:
16 atcatacactccatcataattcaacaacaacttatcatatttc-ctcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaat 114  Q
    ||||| || ||||||||  |||||||||||| | ||||| ||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
22275119 atcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaat 22275218  T
115 ccatgaatatgtatacccaaacgatgattcat 146  Q
     |||||||||| ||||| || | |||||||||    
22275219 tcatgaatatgcatacctaagcaatgattcat 22275250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 47984624 - 47984759
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
47984624 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 47984723  T
179 aattgcacaagaatcatagctcaattcaactacaac 214  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47984724 aattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 48003198 - 48003333
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
48003198 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatc 48003297  T
179 aattgcacaagaatcatagctcaattcaactacaac 214  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48003298 aattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 47993911 - 47994046
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||    
47993911 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 47994010  T
179 aattgcacaagaatcatagctcaattcaactacaac 214  Q
    ||||| ||| |||||| | |||||| |||| |||||    
47994011 aattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 48012484 - 48012619
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||   ||||||||||||| |||| ||| |||| || ||| ||||||    
48012484 aaaacatcagcaacaattcaaattctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatc 48012583  T
179 aattgcacaagaatcatagctcaattcaactacaac 214  Q
    ||||| ||| |||||| | |||||| |||| |||||    
48012584 aattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 326
Target Start/End: Original strand, 16821099 - 16821363
Alignment:
64 ttcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctatt 163  Q
    ||||| |||||||| ||| |||||||||| ||| |  || ||||||| |||||||||||||| | |||||| | || |||||||||  | || ||| | |    
16821099 ttcaccaatttcacaaaaccaccaacaaccatttat-ttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaat 16821197  T
164 agcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttct 260  Q
    | |||  | ||||||||||| ||| |||||| | ||||| ||||| ||||| |  |  ||||||| | |||| |||||||  ||||| |||  ||||| |    
16821198 aacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacattttt 16821297  T
261 acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||||| |||||| ||| | ||||||||||||||| |||| ||||||| |||||||||||||||    
16821298 acatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacata 16821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 55316187 - 55316443
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||| | || |||||| ||  | |  ||| | || |||  |    
55316187 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 55316285  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
55316286 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 55316385  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
55316386 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 55316443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 41270043 - 41270299
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||| | || |||||| ||  | |  ||| | || |||  |    
41270043 tttcaccaaaacaccaaca-caactcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 41270141  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
41270142 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 41270241  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| |||   |||||||||||||||  ||  |||||||||||||||||||||||    
41270242 gaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacata 41270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2449436 - 2449391
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
2449436 caatcataacatataatcataccctccatcataattcaacaacaac 2449391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 19231945 - 19231997
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatat 124  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
19231945 tttcaccaaaacaccaacaacaatccaaattatcatcatcaattcatgaatat 19231997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 13975853 - 13975766
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaa 321  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | ||||||||||||||||    
13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa 13975766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 45860937 - 45861024
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaa 321  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | ||||||||||||||||    
45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa 45861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 321
Target Start/End: Complemental strand, 13955185 - 13954934
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | |  ||| | || |||  |    
13955185 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 13955087  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||  ||||| |  |  ||||||||| |||  ||||||| |||||||||  |||||| ||| |||||    
13955086 taacatcatttgaacaagcatcacatctcaaattaatgacaacttaggagaaattcatcaattgagcacaatattcataactgatcatttttacttattt 13954987  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaa 321  Q
    ||||||| |||   ||||||||||||||| | || | ||||||||||||||||    
13954986 aaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa 13954934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 13976017 - 13975944
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat 146  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || ||||||    
13976017 tttcaccaaaacaccaaca-caactcaaattatcatcaacaatccatgaatatgcaaacccaagcaattattcat 13975944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 45860773 - 45860834
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 134  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
45860773 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa 45860834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 22144564 - 22144532
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    |||||||||||||||||||||||||||||||||    
22144564 caattcacaaatttcaccaaaacaccaacaaca 22144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 12265050 - 12264932
Alignment:
104 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 203  Q
    ||||||||||||||| | |||||||||||||   || ||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
12265050 tcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 12264951  T
204 tcaactacaacatgtcaaa 222  Q
    ||||| ||||||| |||||    
12264950 tcaacaacaacatatcaaa 12264932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 7292913 - 7293240
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
7292913 caatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaacaattcaaa 7293012  T
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
7293013 ttctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 7293112  T
201 aattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
7293113 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 7293212  T
300 tattatcaattcatgcatacaaacatat 327  Q
    |||||| |||||||||||||||||||||    
7293213 tattattaattcatgcatacaaacatat 7293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 11581035 - 11580778
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||| | ||||||||||||| |||||||| |||| || | |    
11581035 tttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagcca 11580936  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
11580935 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 11580836  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
11580835 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 11580778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 60 - 327
Target Start/End: Complemental strand, 13037322 - 13037053
Alignment:
60 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| ||||||||    
13037322 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatc 13037223  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt 257  Q
     ||||  ||  | ||||| ||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
13037222 aattaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 13037123  T
258 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||    
13037122 tgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatat 13037053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 47481320 - 47481071
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| | |||||| ||||  | | | ||||||    
47481320 aaaacaccaacaacaattcaaattatcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatc 47481221  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 275  Q
    ||||| |||||||||||| ||||||||||| ||||| | |  ||||||| ||| |||  ||||||||||| ||||| |||||| ||||||||| ||||||    
47481220 aattgaacaagaatcataactcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatg 47481122  T
276 gaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     ||| | || |||||||||||| |||| |||||||||||||||||||||||    
47481121 taatttcactaacaatcatacaattatcatcaattcatgcatacaaacata 47481071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 72 - 323
Target Start/End: Original strand, 36052634 - 36052884
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
    |||||||||||| |||||||||| | ||||| | |   ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
36052734 caacatcaattgaacaagaatcaaatctcaaatta---acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36052830  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 323  Q
    |||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||    
36052831 aacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaac 36052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 75 - 326
Target Start/End: Complemental strand, 16479244 - 16478990
Alignment:
75 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
16479244 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 16479145  T
174 acatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 271  Q
    ||||||||||  ||||||||| | ||||| | ||  | ||| |  | ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
16479144 acatcaattgagcaagaatcaaatctcaaattaaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 16479045  T
272 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
16479044 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 16478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 18254130 - 18253874
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||  | || |||||||||  |||||||| |||| |||| |    
18254130 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatcca 18254032  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
18254031 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 18253932  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
18253931 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 18253874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 11516324 - 11516451
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
11516324 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 11516423  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
11516424 tattatcaattcatgcatacaaacatat 11516451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 15441730 - 15441603
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
15441730 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 15441631  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
15441630 tattatcaattcatgcatacaaacatat 15441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 30262295 - 30262168
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
30262295 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 30262196  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
30262195 tattatcaattcatgcatacaaacatat 30262168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 16211733 - 16211990
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| || |||| ||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | |    
16211733 tttcaccaaaacaccaacaacaattcaaattctcttcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaacca 16211832  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||  |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
16211833 taacatcaatttaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 16211932  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | || ||||||| |||| |||| ||||||||||||||||||||||||    
16211933 aacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatat 16211990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 13320988 - 13321239
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||| || | ||||||   ||||||||||||| |||||||| |||| || ||| ||||||    
13320988 aaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatc 13321087  T
179 aattgcacaagaatcatagctcaattcaacta-caacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaaca 273  Q
    ||||| ||| |||||||| ||||||||||| | |||| | |  ||||||| | |||  |||||| |||||||||||  ||||| ||||||  || |||||    
13321088 aattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattcaccaattgagcacaa-tttcataacttgacatttatacatactttgaaaca 13321186  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    || ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
13321187 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 13321239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 3059933 - 3060190
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||| ||||||  ||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   |    
3059933 tttcatcaaaacacccacaacatctcaaattatcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 3060032  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccattt--gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  | ||||||| ||||||  ||| |||||||| || || |||||| |||||||||    
3060033 taacatcaattgaacaagaatcataactcaatctaacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatattt 3060131  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     |||||| ||| | ||||||| |  |||| |||| ||||||| ||||||||||| ||||    
3060132 gaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatat 3060190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 13572644 - 13572900
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
13572644 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 13572742  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
13572743 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 13572842  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| ||| | ||||||||||| ||| | || |||||||||||||||||||||||    
13572843 aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacata 13572900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 2437425 - 2437681
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || |||||||||  | || ||| | || |||  |    
2437425 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattca 2437523  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatt 267  Q
     ||||||| ||| |||||||||| | ||||  | ||| |||||  | |  ||||||| ||| |||  |||||| |||||||||| |||||| | |||||     
2437524 taacatcatttgaacaagaatcaaatctcatattaacaacaacttaggaaaaattca-ccaattgaacacaatcttcataacttatcatttttgcatata 2437622  T
268 taaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    | |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
2437623 tgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 2437681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 10989378 - 10989633
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
10989378 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 10989476  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| |  || |||||  | |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
10989477 taacatcatttgaacaagaatcacaactcaaat-tacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 10989575  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
10989576 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 10989633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 326
Target Start/End: Complemental strand, 13911292 - 13911052
Alignment:
90 aacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaag 189  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||   || |||||||||  | || ||| | || |||  | ||||||||||| ||| |    
13911292 aacaattcaaattctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatg 13911193  T
190 aatcatagctcaattcaactacaacat---gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaacc 285  Q
    ||||| | ||||| ||||| ||||| |   |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||    
13911192 aatcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcacc 13911093  T
286 aacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||||||||| |||  |||||||||||||||||||||||    
13911092 aacaatcatacaattaacatcaattcatgcatacaaacata 13911052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 326
Target Start/End: Complemental strand, 296257 - 296006
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    ||||||||||||||||  ||||||| |||||| |||||||||||||||| | |||||||| |  | ||||||||   |||||||| ||||  | ||||||    
296257 caccaaaacaccaacacaaattcaatttttcaacatcaatccatgaataagcatacccaatcagtaattcatca---acaacatcaattaatagcaacaa 296161  T
175 catcaattgcacaagaatcatagctcaattc-aactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaa 270  Q
    ||||||||| ||| |||||| | | |||||| |||  |||  | |  ||||||| |||||||   | |||||| |||||||||||||| |||||| || |    
296160 catcaattgaacatgaatcacaacacaattcaaacatcaatttagcaaaattca-ccatttggatataatttttataacttctcatttttacataattca 296062  T
271 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||| ||| | |||||||||||||   |||| ||| ||||||||| |||||||||    
296061 acatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacata 296006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15441762 - 15441717
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
15441762 caatcataacatataatcatacactccatcataattcaacaacaac 15441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30262327 - 30262282
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
30262327 caatcataacatataatcatacactccatcataattcaacaacaac 30262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11516292 - 11516337
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
11516292 caatcataacatatactcatacactccatcataattcaacaacaac 11516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 25292470 - 25292377
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||    
25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatat 25292377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 15822723 - 15822691
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    |||||||||||||||||||||||||||||||||    
15822723 caattcacaaatttcaccaaaacaccaacaaca 15822691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 25292633 - 25292560
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat 146  Q
    ||||||||||||||||||| ||| ||||||| |||| | ||||||||||||||| | |||||| | || ||||||    
25292633 tttcaccaaaacaccaaca-caactcaaattctcattaacaatccatgaatatgcaaacccaagcaattattcat 25292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 17224230 - 17224075
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||| ||||| || ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| ||||||   ||||||||    
17224230 caattcaccaattttacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatc 17224132  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
      |||||| ||||||||||||||| ||| || || ||   ||||||||| |||||||    
17224131 acttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacat 17224075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 37432 - 37105
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcctcaattcacaaatttcaccaaaacaccaacaacaattcaaa 100  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
37432 caatcacaacatataatcatacactccatcataattcaacaaaaacttatcatatttcatcaattcacaaatttcaccaaaacaccaacaacaattcaaa 37333  T
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 200  Q
    || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
37332 ttctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctc 37233  T
201 aattcaactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
37232 aatccaactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 37133  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
37132 tattatcaattcatgcatacaaacatat 37105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 19173 - 19430
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
19273 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 19372  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
19373 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 19430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 21257 - 21514
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
21357 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 21456  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
21457 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 21514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 5e-59; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 80 - 327
Target Start/End: Complemental strand, 18531355 - 18531106
Alignment:
80 aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca 179  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||| |||||||| |||| || ||| |||||||    
18531355 aaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatca 18531256  T
180 attgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    |||| ||| |||||||| ||||||||||| ||||| | |  ||||||| ||| |||  ||||||||||| |||||| ||||| |||||| || ||||||     
18531255 attgaacatgaatcatatctcaattcaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgt 18531157  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
18531156 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 18531106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 327
Target Start/End: Complemental strand, 22054125 - 22053872
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| |||| || ||| |||    
22054125 accaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataac 22054026  T
176 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 273  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
22054025 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 22053926  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    || ||| | |||||||||||||||  ||| |||||||||| |||||||||||||    
22053925 tgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatat 22053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 23506932 - 23507189
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
23506932 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 23507031  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
23507032 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 23507131  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
23507132 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 23507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 27182854 - 27182586
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||| | ||||||||||||| ||||||||     
27182854 caattcaaaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatca 27182755  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
27182754 attaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 27182655  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | | ||||| |||||| ||| | | ||||||||||||| |||| |||| |||||||||||||||||||    
27182654 gttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatat 27182586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 75 - 326
Target Start/End: Original strand, 34939248 - 34939500
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
34939248 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataa 34939347  T
175 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 272  Q
    |||||| || |||||||||||| |||||||| || |  || | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
34939348 catcaactgaacaagaatcataactcaattc-acaatgacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 34939446  T
273 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||  || | ||||||||||||||| |||| |||||||||||||||||||||||    
34939447 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 34939500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 20623066 - 20623193
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
20623066 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 20623165  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
20623166 tattatcaattcatgcatacaaacatat 20623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 21233694 - 21233567
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
21233694 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 21233595  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
21233594 tattatcaattcatgcatacaaacatat 21233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 37052844 - 37052968
Alignment:
204 tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat 302  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||    
37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
303 tatcaattcatgcatacaaacatat 327  Q
    |||||||||||||||||||||||||    
37052944 tatcaattcatgcatacaaacatat 37052968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 16536294 - 16536421
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
16536294 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 16536393  T
300 tattatcaattcatgcatacaaacatat 327  Q
    |||||| |||||||||||||||||||||    
16536394 tattataaattcatgcatacaaacatat 16536421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 25900571 - 25900445
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |    
25900571 aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat 25900473  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||| ||||||||||||||||||||||||    
25900472 tatcatcaattcatgcatacaaacatat 25900445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 18778276 - 18778020
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | ||  ||  |    
18778276 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattca 18778178  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
18778177 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 18778078  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
18778077 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 18778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 22366765 - 22366509
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
22366765 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 22366667  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
22366666 taacatcatttgaacaagcatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 22366567  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
22366566 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 22366509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 25426596 - 25426852
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
25426596 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25426694  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| |||||| | ||||| |    
25426695 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 25426794  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
25426795 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 12342 - 12598
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
12342 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 12440  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| ||| || | ||||| |    
12441 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat 12540  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
12541 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 12598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 17471887 - 17471803
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcat 146  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||| | |||||||||    
17471887 aattcaccaatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcat 17471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 326
Target Start/End: Complemental strand, 4200251 - 4200013
Alignment:
91 acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaaga 190  Q
    |||||||||||| |||||||||| ||||||||||| | |||||| | || |||||||||  | || ||| | || |||  | ||||||||||| ||| ||    
4200251 acaattcaaattctcatcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatga 4200152  T
191 atcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaa 287  Q
    |||| | ||||| ||||| |||||||  |  ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | |||||    
4200151 atcacatctcaaatcaacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaa 4200052  T
288 caatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||||||  ||  |||||||||||||||||||||||    
4200051 caatcatacaactaacatcaattcatgcatacaaacata 4200013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 19499867 - 19500123
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| || | || ||| |||||  | || ||| | || |||  |    
19499867 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattca 19499965  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| |||||| | ||||| |    
19499966 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 19500065  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
19500066 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 19500123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 21073879 - 21073623
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
21073879 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattga 21073781  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  |    ||||||| | | || ||||||| |||||||||| |||||| | ||||| |    
21073780 taacatcatttgaacaagaatcacaactcaaattaacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatat 21073681  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  ||| |||||||||||||||||||    
21073680 gaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacata 21073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 27009809 - 27010065
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
27009809 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 27009907  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  | ||||| |||||||||| |||||| |||||||||    
27009908 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatattt 27010007  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| ||| | ||||||| ||||||| | || |||||||||||||||||||||||    
27010008 aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacata 27010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 43443679 - 43443423
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
43443679 tttcaccaaaacaccaaca-caattcaaatcctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43443581  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||| ||| | ||||| ||||| |||||  |    ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
43443580 taacatcatttgaacaagactcacatctcaaatcaacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 43443481  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
43443480 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 43443423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 29188404 - 29188312
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 29188312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 29190552 - 29190479
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaacta 152  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||    
29190552 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaacta 29190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20623034 - 20623079
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
20623034 caatcataacatataatcatacactccatcataattcaacaacaac 20623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21233726 - 21233681
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
21233726 caatcataacatataatcatacactccatcataattcaacaacaac 21233681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25900603 - 25900558
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
25900603 caatcataacatataatcataccctccatcataattcaacaacaac 25900558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16536262 - 16536307
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
16536262 caatcataacatacaatcataccctccatcataattcaacaacaac 16536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37052809 - 37052854
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
37052809 caatcataacatataatcataccctccatcataactcaacaacaac 37052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 23493916 - 23494029
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaa 202  Q
    ||||||||||  ||||||| ||| | |||||| | |||| |||||| | ||||||||  |||||| ||||||||||||||| ||| ||||| || | |||    
23493916 tcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 23494015  T
203 ttcaactacaacat 216  Q
    |||||| |||||||    
23494016 ttcaacaacaacat 23494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 7728466 - 7728530
Alignment:
152 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
7728466 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 7728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 327
Target Start/End: Original strand, 8820 - 9073
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||  | ||| |||    
8820 accaaaacaccaacaaaaattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataac 8919  T
176 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 273  Q
    |||||||| |||  ||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
8920 atcaattgaacattaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 9019  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    || ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
9020 tgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 9073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 148688 - 148945
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||| | ||||||||||||| ||||| || |||| || | |    
148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
148788 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 148887  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
148888 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 148945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 8e-58; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 19795011 - 19794743
Alignment:
61 caattcacaaatttcaccaaaa-caccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
19795011 caattcacaa-tttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatc 19794913  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatt 257  Q
     |||| |   || ||||||||||| |||||||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||    
19794912 aattaacggaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatt 19794813  T
258 tctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | | ||||| |||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||    
19794812 tgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatat 19794743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 36982737 - 36982480
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||| || |||    
36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| ||| |||||||| ||||||||||| ||||| || | ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
36982637 taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 36982538  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||| ||||| |||| |||| ||||||||||| ||||||||||||    
36982537 aacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatat 36982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 327
Target Start/End: Complemental strand, 24341681 - 24341428
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||   |||||| |||| || ||| |||    
24341681 accaaaacaccaacaataattcaaattttcatcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataac 24341582  T
176 atcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaaca 273  Q
    |||||||| ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||    
24341581 atcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaaca 24341482  T
274 tggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |  ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
24341481 tataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 24341428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 8891209 - 8891466
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | |    
8891209 tttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 8891308  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
8891309 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 8891408  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| |  |||||||||||||| |||| ||||||||||||||||||||||||    
8891409 aacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatat 8891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 25265679 - 25265430
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||    
25265679 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 25265580  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||     
25265579 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgt 25265480  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
25265479 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 25265430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 19689567 - 19689440
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
19689567 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 19689468  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
19689467 tattatcaattcatgcatacaaacatat 19689440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 23820168 - 23820295
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
23820168 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 23820267  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
23820268 tattatcaattcatgcatacaaacatat 23820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 75 - 316
Target Start/End: Complemental strand, 7508138 - 7507894
Alignment:
75 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
7508138 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaata 7508039  T
174 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattta 269  Q
    |||||||||   ||| |||||||| ||||||| ||| ||||| | | |||||||| ||| |||  ||||||||||||||||| | |||| |||||||||     
7508038 acatcaattaaaacatgaatcatatctcaatt-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttg 7507941  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 316  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||    
7507940 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 14906606 - 14906479
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
14906606 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 14906507  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
14906506 tattatcaattcatgcatacaaacatat 14906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 462706 - 462962
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| |||||||||||||||| |||||||| | ||| ||||| |||||||||| |||||||| | ||||||||||||  || ||||| |||| || | |    
462706 tttcatcaaaacaccaacaaca-ttcaaattcttatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagcca 462804  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt 268  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| ||| |||  ||||||||||| ||||| |||||| |||||||||    
462805 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatattt 462903  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||    
462904 gaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatat 462962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 20015108 - 20015235
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| |    
20015108 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat 20015207  T
300 tattatcaattcatgcatacaaacatat 327  Q
    |||||||||||||||||| |||||||||    
20015208 tattatcaattcatgcatgcaaacatat 20015235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 43643250 - 43642996
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||||||| |   ||||||| ||||||||||| |||||||||| |||||||| |  ||||||||||||||||||||| |||| || |||    
43643250 tttcatcaaaacaccaacatc---tcaaattatcatcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaa 43643154  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     | ||||||||| |||||||||||| ||||| | ||  ||||| | |  ||||||| | |||  |||||||||||| |||||  ||||| | | |||||     
43643153 tagcatcaattgaacaagaatcatatctcaaattaataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttg 43643054  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 43642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 20627609 - 20627352
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||||||||||  ||||||| ||||| ||||| |||||||||  |||||||| | ||||||||||||| |||||| | |||| || | |    
20627609 tttcatcaaaacaccaacaacatctcaaattatcatcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaacca 20627510  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattta 269  Q
     || |||||||| |||||||| | | ||||| | ||| ||||| |  |||| |||| | |||  |||||||||||| || || |||||| |||||||||     
20627509 taaaatcaattgaacaagaattaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttg 20627410  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     ||||| ||| | ||||||||||||||| |||| |||||||| |||||||||||||||    
20627409 gacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatat 20627352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 19886945 - 19886689
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
19886945 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 19886847  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatc-catttgcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | | || ||||||| |||||||||| ||| || | ||||| |    
19886846 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatat 19886747  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
19886746 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 19886689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19689599 - 19689554
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
19689599 caatcataacatataatcatacactccatcataattcaacaacaac 19689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 17396784 - 17396697
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaa 321  Q
    ||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | ||||||||||||||||    
17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatacaa 17396697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14906638 - 14906593
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
14906638 caatcataacatataatcataccctccatcataattcaacaacaac 14906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20015076 - 20015121
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
20015076 caatcataacatataatcataccctccatcataattcaacaacaac 20015121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23820136 - 23820181
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
23820136 caatcataacatataatcataccctccatcataattcaacaacaac 23820181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 17396948 - 17396887
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaa 134  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | ||||||    
17396948 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaa 17396887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 19669362 - 19669279
Alignment:
101 ttttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||||||||||| | ||||||| ||| |||||||| | |||| |||||||| | ||||||  |||||| |||||||||||||||    
19669362 ttttcatcatcagttcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg 19669279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 9636761 - 9636821
Alignment:
122 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 182  Q
    |||| |||||||||| |||| |||||||| |||| |||| ||| || ||||||||||||||    
9636761 tatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaatt 9636821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 19666525 - 19666605
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
19666525 tcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacatcaattg 19666605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 24884718 - 24884762
Alignment:
138 atgattcatcaactacaacatctattagcatcaacaacatcaatt 182  Q
    |||| |||||||| |||| ||||||||||| ||||||||||||||    
24884718 atgaatcatcaacaacaatatctattagcaacaacaacatcaatt 24884762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 32465813 - 32465845
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    ||||||| |||||||||||||||||||||||||    
32465813 caattcataaatttcaccaaaacaccaacaaca 32465845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 37209 - 36952
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || | |    
37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 269  Q
     ||| ||||||| |||||| ||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| |||||| |||||||||     
37109 taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttg 37010  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||| | |||| |||| ||||||||||||||||||||||||    
37009 aacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatat 36952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 61 - 327
Target Start/End: Original strand, 23153403 - 23153671
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||   ||||||||||||| ||||||||     
23153403 caattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatca 23153502  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | || |||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
23153503 attaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 23153602  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
23153603 gttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 23153671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 14626407 - 14626158
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
14626407 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 14626308  T
179 aattgcacaagaatcatagctcaattcaactacaacatgtca-aattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 275  Q
    |||||  ||||||||| | ||||| | ||| ||||| |  || |||||| ||| |||  ||||||||||||||||| |||||| ||||||||| ||||||    
14626307 aattgagcaagaatcaaatctcaagttaacaacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatg 14626209  T
276 gaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
14626208 taatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 14626158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 323
Target Start/End: Complemental strand, 35009735 - 35009482
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| |||| || |||    
35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
    |||||||||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| ||     
35009635 caacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattg 35009536  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 323  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
35009535 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 35009482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 75 - 326
Target Start/End: Complemental strand, 1658040 - 1657788
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
1658040 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataa 1657941  T
175 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 272  Q
    |||||| || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
1657940 catcaactgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaac 1657842  T
273 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||  || | ||||||||||||||| |||| |||||||||||||| ||||||||    
1657841 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacata 1657788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 326
Target Start/End: Original strand, 15862443 - 15862694
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||| |  |||||||||||| |||||||| |||| || ||| ||    
15862443 caccaaaacaccaacaacaattcaaattttcatcacctattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataa 15862542  T
175 catcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaac 272  Q
    ||| || || |||||||||||| |||||||| || | ||| | |  |||| |||| |||  ||||||||||||||||||| ||||| |||||| || |||    
15862543 cat-aaatgaacaagaatcataactcaattc-acaataacttagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaac 15862640  T
273 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||  || | ||||||||||||||| |||| |||||||||||||||||||||||    
15862641 atgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 15862694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 323
Target Start/End: Complemental strand, 1650382 - 1650136
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| ||||||    
1650382 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 1650283  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    |||||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||  ||||||||| ||||||     
1650282 aattgagcaagaatcaaatctcaaattaaccataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgt 1650183  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaac 323  Q
    ||| | ||||||||||||||| |||| ||||||||||||||||||||    
1650182 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 1650136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 27740808 - 27740941
Alignment:
75 caccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaa 174  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || ||||||||   ||  | |||| |    
27740808 caccaaaacaccaacaccaattcaaattttcatcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaacca 27740907  T
175 catcaattgcacaagaatcatagctcaattcaac 208  Q
    ||||||||| ||| |||||||| |||||||||||    
27740908 catcaattgaacatgaatcatatctcaattcaac 27740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 25175531 - 25175787
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
25175531 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 25175629  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
25175630 taacatcatttgaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 25175729  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
25175730 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 27654267 - 27654011
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| |||||||| | || |||||||||  | || ||| | || |||  |    
27654267 tttcaccaaaacaccgaca-caattcaaattctcatcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattca 27654169  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| | | |||||||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| |    
27654168 taacatcattggaacaagaatcacaactcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatat 27654069  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||| ||||    
27654068 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcata 27654011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 18381975 - 18381821
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||| |||||||| ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||| ||||||||    
18381975 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatc 18381877  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca 215  Q
      |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||    
18381876 acttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 16826038 - 16825986
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 125  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
16826038 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg 16825986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 22362032 - 22361926
Alignment:
86 caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgc 184  Q
    ||||||||| |||| || ||||||||||| ||||||| ||| | |||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||     
22362032 caacaacaactcaa-ttctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattga 22361934  T
185 acaagaat 192  Q
    ||| ||||    
22361933 acatgaat 22361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 27751605 - 27751648
Alignment:
283 accaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||||||||||| || | |||||||||||||||||||||||    
27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacata 27751648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 32898745 - 32898774
Alignment:
61 caattcacaaatttcaccaaaacaccaaca 90  Q
    ||||||||||||||||||||||||||||||    
32898745 caattcacaaatttcaccaaaacaccaaca 32898774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 21623123 - 21623278
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||| ||||| ||||||  ||||||||||| |||  ||||||||  |||  ||||||| ||| |||||||| | |||| |||| |||  |||||||    
21623123 caattcaccaattttaccaaactaccaacaacaactcat-ttttcatccacaaatcatgaattatgaatacccaagccatgactcattaacatcaacatc 21623221  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
      |||||| ||||||||||||| | ||| || || || | ||||||||| |||||||    
21623222 acttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacat 21623278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 25367438 - 25367374
Alignment:
152 acaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
    ||||||||  |||||| ||||||||||||||| ||| ||||| || | ||||||||| |||||||    
25367438 acaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat 25367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 33324690 - 33324770
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
33324690 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 33324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 35136262 - 35136182
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||  ||||||  ||||||||||||||    
35136262 tcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattg 35136182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 1091 - 1348
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||| | || |||||||||| |||| ||| |||| || | |    
1091 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaacca 1190  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
1191 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 1290  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| ||||||||||||||||||||| |||||||    
1291 aacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatat 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 3877 - 3621
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||| | || |||||||||||| |||||| |||||||| | || |||| ||||  |||||||| |||| |||| |    
3877 tttcaccaaaacaccaaca-caattcaaactctcctcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatcca 3779  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  |||| |   ||| |||  ||||||||||| ||||| |||||| |||||||||     
3778 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttg 3679  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
3678 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 3621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 20445646 - 20445903
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | |    
20445646 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20445745  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20445746 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20445845  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 20445903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 20531411 - 20531668
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | |    
20531411 tttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagcca 20531510  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     |||||||||||  ||||||||||| | ||||||||| ||||| | |  ||||||| | |||  ||||||||||||  |||| |||||| | | || ||     
20531511 taacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttg 20531610  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 20531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 61 - 327
Target Start/End: Complemental strand, 20893933 - 20893665
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||| ||||||||||||| ||||||||     
20893933 caattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatca 20893834  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| ||   | ||||||||||| ||||||||||||  |||||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| ||||||    
20893833 attaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcattt 20893734  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||    
20893733 gttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatat 20893665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 20931312 - 20931569
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||   || |||||||||| |||||||| |||| || | |    
20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||  | |  ||||||| | |||| |||||||||||||||||| |||||| ||||||| |     
20931412 taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatg 20931511  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
20931512 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 20931569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 51452589 - 51452716
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |    
51452589 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat 51452688  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
51452689 tattatcaattcatgcatacaaacatat 51452716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 75 - 327
Target Start/End: Original strand, 41394191 - 41394446
Alignment:
75 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||| |||||||| | || || ||| |    
41394191 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaata 41394290  T
174 acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 271  Q
    ||||||||||  ||||||||| | |||||   ||| | ||| | |  ||||||| | |||  |||||||||||| ||||| |||||| ||||||||| ||    
41394291 acatcaattgagcaagaatcaaatctcaacataacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaa 41394390  T
272 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||| ||  | ||||||||||||||| |||| ||||||| ||||||||||||||||    
41394391 catgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatat 41394446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 20913004 - 20913254
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||| |||| ||| |||| || | |    
20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| ||||||||||      |||| ||| |||||  ||  ||||||| | |||  |||||||||||||||||| |||||| ||||||| |     
20913104 taacatcaattgaacaagaatca------aatt-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatg 20913196  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
20913197 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 20913254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 316
Target Start/End: Original strand, 22227777 - 22228022
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
22227777 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22227875  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | ||||||||||||||||| |||||| |||||||||     
22227876 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22227975  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 316  Q
    |||||| ||| | || |||||||||||| |||| |||||||||||||    
22227976 aacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 316
Target Start/End: Original strand, 22232474 - 22232719
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
22232474 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 22232572  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | ||||||||||||||||| |||||| |||||||||     
22232573 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttg 22232672  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgca 316  Q
    |||||| ||| | || |||||||||||| |||| |||||||||||||    
22232673 aacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 2116228 - 2116478
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
2116228 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 2116327  T
179 aattgcacaagaatc-atagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg 275  Q
    |||||  |||||||| | |  |||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||    
2116328 aattgagcaagaatcaaaatatcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatg 2116427  T
276 gaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
2116428 taatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 2116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 37844746 - 37844489
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | |||| |||||||| |||||||| |||| || | |    
37844746 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaacca 37844648  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttca-taacttctcatttctacatattt 268  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||||  |||  |||||||||||| ||  || |||||| | | || ||    
37844647 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctactt 37844548  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
37844547 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 37844489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 45051554 - 45051643
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaac 323  Q
    |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||    
45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 45051643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51452557 - 51452602
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
51452557 caatcataacatataatcatacactccatcataattcaacaacaac 51452602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 45051416 - 45051496
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| |  |||||||||||| | ||||||    
45051416 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc 45051496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 18601402 - 18601146
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | |||||| | || |||||| ||  | |  ||| | || |||  |    
18601402 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 18601304  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
18601303 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 18601204  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
18601203 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 18601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 5072672 - 5072416
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||||||||| | |||||| | || |||||| ||  | |  ||| | || |||  |    
5072672 tttcaccaaaacaccaaca-caactctaattctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattca 5072574  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| | ||||| |    
5072573 taacatcatttgaacaagcatcacatctcaacttaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatat 5072474  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | |||||||||||||||  ||  ||||||||||||||| |||||||    
5072473 gaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacata 5072416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 93
Target Start/End: Original strand, 49967607 - 49967638
Alignment:
62 aattcacaaatttcaccaaaacaccaacaaca 93  Q
    ||||||||||||||||||||||||||||||||    
49967607 aattcacaaatttcaccaaaacaccaacaaca 49967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 20254308 - 20254389
Alignment:
101 ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 182  Q
    |||||||||||||||||| | |||||||||||||   || ||||| | || ||||||| | | |||| ||||||||||||||    
20254308 ttttcatcatcaatccataattatgtatacccaagtcataattcacccacaacaacatgtctcagcaacaacaacatcaatt 20254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 22143611 - 22143531
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    ||||||||||  ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| |||||||||||||||    
22143611 tcatcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattg 22143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 48155 - 48411
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||  | || |||||||||  |||||||| |||| |||| |    
48155 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatcta 48253  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| ||||| |||||| |||| ||||     
48254 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttg 48353  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
48354 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 48411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 107715 - 107971
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  |||||||| |||| |||| |    
107715 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatcca 107813  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | || ||||||| | |||  |||||||||| | ||||| |||||| | || ||||     
107814 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttg 107913  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
107914 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 107971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 297
Target Start/End: Complemental strand, 64812 - 64585
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
64812 tttcaccaaaacaccaaca-caactcaaattctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 64714  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||    
64713 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatattt 64614  T
269 aaacatggaatctaaccaacaatcataca 297  Q
    ||||||| ||| | |||||||||||||||    
64613 aaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 48565 - 48822
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| |||||||| ||||  | | |    
48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatcca-tttgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| ||||||  | | ||||| | |  ||||||| | | |  |||||||||||| ||||| |||||| | | |||||     
48665 taacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttg 48764  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
48765 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 48822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 326
Target Start/End: Original strand, 36065 - 36317
Alignment:
76 accaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaac 175  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||| | |||||| | || |||||||||  | |  ||| | || |||  | |||    
36065 accataacaccaaca-caattcaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataac 36163  T
176 atcaattgcacaagaatcatagctcaattcaactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaac 272  Q
    ||| |||| ||| |||||| | ||||| | ||| |||||  | |  ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | ||     
36164 atctattgaacatgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaat 36263  T
273 atggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| ||| | |||||||||||||||  ||  |||||||||| ||||||||||||    
36264 atgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacata 36317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 123460 - 123203
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||| | || |||||||||| |||||||| |||| || | |    
123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| || |||  ||| ||||| | |  ||||||| | |||  |||||||||||| ||||| |||||| | | |||||     
123360 taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttg 123261  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
123260 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 123203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 255106 - 255074
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    ||||||||||||||||| |||||||||||||||    
255106 caattcacaaatttcacgaaaacaccaacaaca 255074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 261712 - 261680
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    ||||||||||||||||| |||||||||||||||    
261712 caattcacaaatttcacgaaaacaccaacaaca 261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 1250 - 995
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | || |||||||||  | |||||  |||| |||| |    
1250 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatcca 1152  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||| ||| |||||||| | | ||||||| ||| ||||| | |  ||||||||| |||  |||||||||||| ||||| | |||| |||||||||     
1151 taacatcacttgaacaagaataaaatctcaatt-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttg 1053  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
1052 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 41622 - 41871
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||  ||| || ||||||||||    
41622 aaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatc 41721  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatg 275  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||| ||| |||  ||||||||||| |||||| ||||| |||||| || ||||||    
41722 aattgaacatggttctcatcataattcaacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatg 41820  T
276 gaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
41821 taatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 41871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 9626 - 9377
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
9626 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 9527  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
9526 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 9427  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
9426 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 16524 - 16275
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||||||||||||||||| |||| || | | ||||||    
16524 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatc 16425  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    | |||  ||||||||| | ||||| | ||| | ||| | |  ||||||| | |||  |||| ||||||| ||||| |||||| ||||||||| ||||||     
16424 atttgagcaagaatcaaatctcaaattaacaataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgt 16325  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
16324 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 16275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 22637 - 22764
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
22637 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 22736  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
22737 tattatcaattcatgcatacaaacatat 22764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 26892 - 27019
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
26892 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 26991  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
26992 tattatcaattcatgcatacaaacatat 27019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22605 - 22650
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
22605 caatcataacatataatcataccctccatcataattcaacaacaac 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26860 - 26905
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
26860 caatcataacatataatcataccctccatcataattcaacaacaac 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 1748 - 1621
Alignment:
201 aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |    
1748 aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat 1649  T
300 tattatcaattcatgcatacaaacatat 327  Q
    ||||||||||||||||||||||||||||    
1648 tattatcaattcatgcatacaaacatat 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1780 - 1735
Alignment:
1 caatcataacatataatcatacactccatcataattcaacaacaac 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
1780 caatcataacatataatcataccctccatcataattcaacaacaac 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Original strand, 12083 - 12337
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| | || |||||| ||  | |||||| |||| |||  |    
12083 tttcactaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattca 12181  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | |||||||  || ||||| |  |||| |||| | |||| |||||||||||| ||||| |||||| |||| |||||    
12182 taacatcaattgaacaagaatcaaatctcaatt--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacattta 12279  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| | | | ||||||||||||||| |||| ||||||||||||||||||||||||    
12280 aacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 12337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 128464 - 128208
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| |    
128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||||| ||| ||||| |  |||| |   ||| ||  |||||||||||| |||||  ||  | |||| ||||     
128364 taacatcaattgaacaagaatcaaatctcaatt-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttg 128266  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||    
128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatat 128208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 326
Target Start/End: Complemental strand, 31942 - 31703
Alignment:
91 acaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaaga 190  Q
    |||||||||||| ||||||| |||||||||||||| | |||||| | || |||||||||  | || ||  | || |||  | ||||||||||| ||| ||    
31942 acaattcaaattctcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatga 31843  T
191 atcatagctcaattcaactacaac---atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaacca 286  Q
    |||| | ||||| ||||| |||||   | |  ||||||| | |||  ||| ||| |||||||||| |||||| | ||||| | || ||| ||| | ||||    
31842 atcacatctcaaatcaacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcacca 31743  T
287 acaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||||||||  ||  |||||||||||||| ||||||||    
31742 acaatcatacaactaacatcaattcatgcattcaaacata 31703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 22650 - 22678
Alignment:
65 tcacaaatttcaccaaaacaccaacaaca 93  Q
    |||||||||||||||||||||||||||||    
22650 tcacaaatttcaccaaaacaccaacaaca 22678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 6358 - 6103
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | || |||||||||  | ||||   |||| |||| |    
6358 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatcca 6260  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||| ||| |||||||||| | ||||||| ||| ||||| | |  ||||||| | |||  |||||||||| | ||||| | |||| |||||||||     
6259 taacatcacttgaacaagaatcaaatctcaatt-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttg 6161  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
6160 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 6103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 13480 - 13729
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||| |||| |||||||||| ||||| ||||| |||||||||| ||||||||   ||||||||||||| |||||||| |||| || ||||||||||    
13480 aaaacacctacaaaaattcaaattctcatcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatc 13579  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    ||||| ||| |  ||  | |  |||||||| ||||||| |  ||||||||| |||  |||||||||||| |||||| ||||| |||||| || ||||||     
13580 aattgaacatggttctcatcataattcaacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgt 13679  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
13680 aatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 13729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 8846 - 9101
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||| | || |||||||||  |||||||| |||| |||| |    
8846 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatcca 8944  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| |  | ||||||| | |||  |||||||||||| |||||  ||||| |||||| ||     
8945 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattg 9044  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||| ||| | |||||||||| |||| |||| ||| |||||||||||||||||||    
9045 aacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacata 9101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 327
Target Start/End: Original strand, 41686 - 41953
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||||| ||||||||||||||||||||||||||||||| | || |||||| |||||||||| |||||||| | ||||||||||| |||||||| |     
41686 caattcacaa-tttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaaca 41784  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcattt 258  Q
    |||| || | | | ||||||||| |||||||||||| ||||||  ||| ||||| | |  ||||||| | |||  |||||||||||| || || ||||||    
41785 attaacagccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaattcaccaattgagcacaattttcacaaattatcattt 41884  T
259 ctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
     ||||||||| | |||| ||| | |||||||||   ||| |||| ||||||||||||||||||||||||    
41885 ttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatat 41953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 75 - 326
Target Start/End: Complemental strand, 34755 - 34500
Alignment:
75 caccaaaacaccaacaacaattcaaa-ttttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    |||||||||||| |||||||| | || || ||| |    
34755 caccaaaacaccaacaacaattcaaaattttcatcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaata 34656  T
174 acatcaatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaa 270  Q
    |||||||||   ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  | |||||||||| ||||||  |||| |||| | || |    
34655 acatcaattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattga 34556  T
271 acatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
34555 acatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 34500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 61 - 203
Target Start/End: Original strand, 9338 - 9480
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatct 160  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||     
9338 caattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatca 9437  T
161 attagcatcaacaacatcaattgcacaagaatcatagctcaat 203  Q
    |||| || | | ||||||||||| |||||||||||| ||||||    
9438 attaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 326
Target Start/End: Original strand, 2936 - 3186
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| |||| ||| |  |||||||||||| |||||||| | || || ||| ||||||    
2936 aaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatc 3035  T
179 aatt-gcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatg 275  Q
    ||||   ||| |||||||| ||||||||||| ||||| | |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||||||    
3036 aattaaaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatg 3135  T
276 gaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     ||| | ||||||||||||||| |||| ||||||||||| |||||||||||    
3136 taatttcaccaacaatcatacaattatcatcaattcatggatacaaacata 3186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 247738 - 247481
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||| |||||||| | ||||||||||||| |||||||| |||| ||   |    
247738 tttcaccaaaacaccaacaaccattcaaattctcatcctcagttcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtca 247639  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaattcatccattt--gcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| ||||||  ||| ||||| |  |||| |   ||| ||  |||||||||||| ||||| |||||| | | |||||     
247638 taacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttg 247539  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| ||| | |||  |||||||||| |||| ||||||||||||||||||||||||    
247538 aacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatat 247481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 5356 - 5100
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||||| | ||||||||||||  |||||||| |||| || | |    
5356 tttcatcaaaacaccaacaaca-ttcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 5258  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| |||| |  ||| |||||  ||  ||||||| | |||  |||||||||||| ||||| |||||| |||||||||     
5257 taacatcaattgaacaagaatcataactcattctaacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttg 5158  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| | | | |||||||||| |||| |||| ||||||||| ||||||||||||||    
5157 aacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatat 5100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 316
Target Start/End: Complemental strand, 5498 - 5254
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||| ||  |||||||| |||| |||  |    
5498 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattca 5401  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaac-atgtcaaattcatccatttg--cacaattttcataacttctcatttctacatattt 268  Q
     ||||||||||| |||||||||| | ||||| | ||| |||||   |  ||||||| ||| |||  ||||||||||||||||| |||||| |||||||||    
5400 taacatcaattgaacaagaatcaaatctcaaattaacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatattt 5302  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 316  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
5301 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 74 - 327
Target Start/End: Complemental strand, 828 - 573
Alignment:
74 tcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaaca 173  Q
    ||||||||||||||||||| ||||||||| ||||| ||||| | |||||||| |||||||| | ||||||||||||| |||||||| ||||||| | | |    
828 tcaccaaaacaccaacaaccattcaaattctcatcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccata 729  T
174 acatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaa 271  Q
    |||||||||  |||||||||||| || |||  |||   ||| | |  ||||||| | |||  | |||||||||| ||||  |||||| | | ||||| ||    
728 acatcaattaaacaagaatcataacttaatctaacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaa 629  T
272 catggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
628 catgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatat 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 316
Target Start/End: Original strand, 3690 - 3936
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||   || |||||||||  | |||||| |||| |||  |    
3690 tttcaccaaaacatcaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattca 3788  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatttg-cacaattttcataacttctca-tttctacatattt 268  Q
     ||||||||||| |||||||||| | ||||| | ||| ||||| | |  ||||||| | ||| | |||||||| |||||||| ||| ||| |||||||||    
3789 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatattt 3888  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgca 316  Q
     |||||| ||| | ||||||||||||||| |||| |||||||||||||    
3889 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 327
Target Start/End: Original strand, 171863 - 172129
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 161  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | || | || |||  |||||||||| ||||| || | ||||||||||||| |||||||| |    
171863 aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 171961  T
162 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 259  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
171962 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 172061  T
260 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||    
172062 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatat 172129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 327
Target Start/End: Original strand, 177566 - 177832
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 161  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | || | || |||  |||||||||| ||||| || | ||||||||||||| |||||||| |    
177566 aattcaccaatttcacaaaaccaccaacaacaatccatttcttaa-caacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaa 177664  T
162 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 259  Q
    ||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
177665 ttaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 177764  T
260 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||    
177765 ttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatat 177832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 70914 - 70882
Alignment:
61 caattcacaaatttcaccaaaacaccaacaaca 93  Q
    |||||||||||||||||||||||||||||||||    
70914 caattcacaaatttcaccaaaacaccaacaaca 70882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 326
Target Start/End: Complemental strand, 8466 - 8220
Alignment:
79 aaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatc 178  Q
    ||||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||| | ||||||||| ||| |||||||| |||| || ||||||||||    
8466 aaaacaccagcaacaattcaaattctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatc 8367  T
179 aattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatgg 276  Q
    ||||| ||| |  ||  | |  ||||||   ||||||| |  ||||||| | |||  |||||||||||| |||||| ||||| |||||| || ||| ||     
8366 aattgaacatggttctcatcataattca---acaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgt 8270  T
277 aatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||| | ||||||||||||||| |||| | |||||||||||||||||||||    
8269 aatttcaccaacaatcatacaattatcaccaattcatgcatacaaacata 8220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 72 - 327
Target Start/End: Complemental strand, 26710 - 26454
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| |||||||||||||||| | |||||| ||||| ||||| ||| |||||| |||||||| | ||||||||||||  |||||||| |||| || | |    
26710 tttcatcaaaacaccaacaacact-caaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagcca 26612  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||||| |||| |  ||| ||||| | |  ||||||| | |||  | |||||||||| ||||| |||||| |||||||||     
26611 taacatcaattgaacaagaatcataactcattctaacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttg 26512  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||| | | | ||||| |||| |||| |||| ||||||||| ||||||||||||||    
26511 aacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatat 26454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 327
Target Start/End: Original strand, 271983 - 272249
Alignment:
62 aattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatcta 161  Q
    ||||||| |||||||| ||| ||||||||||||| ||  | |  || | |||| |||||||||| |||||||| | ||||||||||||| |||||||| |    
271983 aattcactaatttcacaaaaccaccaacaacaatccatttctctataa-caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 272081  T
162 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttc 259  Q
    ||| || | | |||| |||||| |||||||||||| |||||| |||| ||||| | |  ||||||| | |||| |||||||||||| ||||| ||||||     
272082 ttaacagctataacaccaattgaacaagaatcataactcaatccaaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttg 272181  T
260 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||||||| |||||||||||||    
272182 ttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatat 272249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 42965 - 43221
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| | |||||| | || |||||||||  | || ||| | || |||  |    
42965 tttcaccaaaacaccaaca-caatttaaattctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattca 43063  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||| |||||| | ||||| | ||| ||||| |  |  ||||||| | |||| ||||||| ||||||||||  ||||| |||||||||    
43064 taacatcacttgaacacgaatcacatctcaaattaacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatattt 43163  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
     |||||| ||| | ||||||||||||||| |||| ||||||||||||||| |||||||    
43164 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacata 43221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 14344 - 14089
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||| | || |||||||||  | |||||| |  | |||  |    
14344 tttcaccaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattca 14246  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||| ||||| |||||||||  | ||||| | | | ||||| | |  ||||||| | |||  ||||||| |||||||||| |||||| |||||||||     
14245 taacattaattgaacaagaatccaatctcaaattatcaacaacttaggaaaattcaccaattgagcacaatcttcataacttatcatttttacatatttc 14146  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||| ||| | || |||||||||| | |||| ||||||||||||||||| |||||    
14145 aacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacata 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 326
Target Start/End: Complemental strand, 21399 - 21144
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||||||||| | || ||| | || |||||||||  | |||||| | || |||  |    
21399 tttcaccaaaacaccaaca-cagttcaaattttcatcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattca 21301  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatattta 269  Q
     ||||||||||| |||||||||  | ||||| | ||| ||||| | |  ||||||| | |||  || |||| |||||||||| |||||| |||||||||     
21300 taacatcaattgaacaagaatccaatctcaaattaacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttg 21201  T
270 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||||| ||| | || |||||||||| | |||| ||||||| ||| |||||||||||    
21200 aacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacata 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 3 - 259
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||||| ||| ||||||| |||||| |||| |||||||||| | |||||| | || |||||| ||  | || ||| | || |||  |    
3 tttcaccaaaacaccaaca-caactcaaattctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattca 101  T
172 caacatcaattgcacaagaatcatagctcaattcaactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatattt 268  Q
     ||||||| ||| ||||| |||| | ||||| | ||| ||||| |  |  ||||||| | |||  ||||||| | |||||||| |||||| |||||||||    
102 taacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatattt 201  T
269 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| ||| | ||||||||||||||| | || |||||||||||||||||||||||    
202 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacata 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 48482 - 48603
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||| |    
48482 tttcatcaaaacaccaaca-caattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatcca 48580  T
172 caacatcaattgcacaagaatca 194  Q
     |||||||| || ||||||||||    
48581 taacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5660 - 5752
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || |||||||||||||||||||||||    
5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacata 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 13445 - 13353
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||    
13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacata 13353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 147 - 26
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaa 171  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| | || |||||||||  | |||||| |||| |||  |    
147 tttcaccaaaacaccaa-aacaattcaaattttcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattca 49  T
172 caacatcaattgcacaagaatca 194  Q
     || |||| ||| ||||||||||    
48 taatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 316
Target Start/End: Original strand, 54415 - 54630
Alignment:
104 tcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat 203  Q
    ||||||||||||||| |||||||||||||||   |||||||| | || ||||||||  |||  | ||||||||||||| | ||| |||||| | |||| |    
54415 tcatcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatt 54514  T
204 tcaactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacact 299  Q
    ||||| ||||||| || ||||||| | |||  | |||| |||||||||||  ||||| ||||||  || ||||||| ||| | ||| ||||||||||| |    
54515 tcaacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaat 54613  T
300 tattatcaattcatgca 316  Q
    ||| |||||||||||||    
54614 tatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 51314 - 51221
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||    
51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatat 51221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 3183 - 3262
Alignment:
80 aaacaccaacaacaattcaaattttcatcatcaatccatgaatatgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||  ||||||||| ||||||||||||  ||||||||    
3183 aaacaccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatc 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 1815 - 1867
Alignment:
72 tttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaatatg 125  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
1815 tttcaccaaaacaccaaca-caattcaaattctcatcatcaatccatgaatatg 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 327
Target Start/End: Complemental strand, 89586 - 89493
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatat 327  Q
    |||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| ||||    
89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatat 89493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 326
Target Start/End: Complemental strand, 1424 - 1332
Alignment:
234 gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 326  Q
    ||||||| |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  |||||||||||||||||||||||    
1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacata 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 77139 - 76984
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatc 159  Q
    |||||||| |||||||| ||| |||||||||||| |||  || |||||| |||  ||||||| ||| |||||||| | |||| |||||||  |||| |||    
77139 caattcaccaatttcacaaaaccaccaacaacaactcat-ttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatc 77041  T
160 tattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat 216  Q
      |||||| ||||||||||||||| ||| |||||  | | ||||||||| |||||||    
77040 acttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacat 76984  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 132542 - 132505
Alignment:
61 caattcacaaatttcaccaaaacaccaacaacaattca 98  Q
    ||||||||||||||||||||||||||||||||| ||||    
132542 caattcacaaatttcaccaaaacaccaacaacatttca 132505  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 197525 - 197390
Alignment:
81 aacaccaacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatca 179  Q
    |||| ||||||||| |||| || ||||||||||  ||||| | ||| | |||||||| |||| |||||||| |||| |||  |||||| |||||||||||    
197525 aacaacaacaacaactcaa-ttctcatcatcaaagcatgatttatgaagacccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatca 197427  T
180 attgcacaagaatcatagctcaattcaactacaacat 216  Q
    |||| ||| |||||  | | ||||||||| |||||||    
197426 attgaacatgaatctcatcacaattcaacaacaacat 197390  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 104872 - 104793
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaatt 182  Q
    ||||||||||| ||||||| ||| |||||||| | |||| |||||||| |||| |||  |||||| ||||||||||||||    
104872 tcatcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt 104793  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 10642 - 10739
Alignment:
86 caacaacaattcaaattttcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||||||||||||  |||||||||||||| ||||||| ||| | |||||| | |||| | |||||| ||||||||  ||||||  ||||||||||||||    
10642 caacaacaattcat-ttttcatcatcaattcatgaattatgaacacccaagccatgaatgatcaacaacaacatcacttagcaaaaacaacatcaattg 10739  T

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Target: scaffold0970 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 2471 - 2532
Alignment:
122 tatgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||| |||||||| | |||| |||||||| ||||||||  |||||| |||||||||||||||    
2471 tatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg 2532  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 7522 - 7551
Alignment:
61 caattcacaaatttcaccaaaacaccaaca 90  Q
    ||||||||||||||||||||||||||||||    
7522 caattcacaaatttcaccaaaacaccaaca 7551  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 38253 - 38282
Alignment:
61 caattcacaaatttcaccaaaacaccaaca 90  Q
    ||||||||||||||||||||||||||||||    
38253 caattcacaaatttcaccaaaacaccaaca 38282  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 2548 - 2612
Alignment:
129 acccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatc 193  Q
    |||||||| |||| |||||||| |||| |||  |||||| ||||||||||||||| ||| |||||    
2548 acccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatc 2612  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 8007 - 8087
Alignment:
104 tcatcatcaatccatgaat-atgtatacccaaacgatgattcatcaactacaacatctattagcatcaacaacatcaattg 183  Q
    |||||| |||| ||||||| ||| |||||||| | |||| |||||||| ||||||||   ||||| |||||||||||||||    
8007 tcatcaccaattcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattg 8087  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 116806 - 116687
Alignment:
60 tcaattcacaaatttcaccaaaacaccaacaacaattcaaattttcatcatcaatccatgaa-tatgtatacccaaacgatgattcatcaactacaacat 158  Q
    ||||||||| ||||| || ||| |||||||||||| || | ||||||||| |||  |||||| |||| | |||||| | |||| |||||||| |||| ||    
116806 tcaattcaccaattttacaaaaccaccaacaacaa-tccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatat 116708  T
159 ctattagcatcaacaacatca 179  Q
    |  |||||| |||||||||||    
116707 cacttagcaacaacaacatca 116687  T

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