View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18188_low_4 (Length: 302)

Name: NF18188_low_4
Description: NF18188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18188_low_4
NF18188_low_4
[»] chr1 (52 HSPs)
chr1 (6-292)||(5179237-5179530)
chr1 (2-179)||(39864094-39864273)
chr1 (17-179)||(16395003-16395165)
chr1 (15-179)||(49223942-49224107)
chr1 (15-180)||(31978607-31978773)
chr1 (4-162)||(9307612-9307772)
chr1 (2-172)||(12039065-12039237)
chr1 (17-175)||(2572468-2572626)
chr1 (10-179)||(11449877-11450045)
chr1 (15-181)||(38787338-38787505)
chr1 (15-168)||(26093391-26093545)
chr1 (15-167)||(917021-917174)
chr1 (4-179)||(24991609-24991786)
chr1 (15-138)||(7759212-7759336)
chr1 (15-176)||(20209799-20209961)
chr1 (15-179)||(40144803-40144968)
chr1 (17-132)||(8896335-8896451)
chr1 (15-168)||(15699119-15699274)
chr1 (16-120)||(36701919-36702023)
chr1 (16-120)||(36718023-36718127)
chr1 (17-168)||(42409993-42410145)
chr1 (17-179)||(31042796-31042959)
chr1 (51-181)||(32970521-32970652)
chr1 (17-179)||(10495838-10496003)
chr1 (16-180)||(34031481-34031647)
chr1 (15-183)||(13579573-13579742)
chr1 (15-120)||(37276458-37276563)
chr1 (15-168)||(6160426-6160580)
chr1 (15-179)||(37506121-37506289)
chr1 (15-120)||(26257956-26258061)
chr1 (17-130)||(27721531-27721644)
chr1 (15-179)||(52429341-52429506)
chr1 (75-162)||(23168966-23169054)
chr1 (2-120)||(14757610-14757729)
chr1 (25-119)||(6023666-6023760)
chr1 (75-180)||(35682761-35682866)
chr1 (44-179)||(41121778-41121917)
chr1 (2-66)||(6785239-6785304)
chr1 (27-151)||(28749000-28749125)
chr1 (15-168)||(33733230-33733383)
chr1 (19-178)||(45331339-45331502)
chr1 (15-67)||(25089155-25089207)
chr1 (15-67)||(35367799-35367851)
chr1 (2-120)||(44707776-44707895)
chr1 (253-292)||(52009259-52009298)
chr1 (19-112)||(24880874-24880970)
chr1 (75-179)||(27687298-27687404)
chr1 (17-66)||(22856307-22856356)
chr1 (16-120)||(31154126-31154230)
chr1 (75-168)||(6267823-6267917)
chr1 (15-65)||(37539124-37539174)
chr1 (17-65)||(4441674-4441722)
[»] chr5 (39 HSPs)
chr5 (15-180)||(7827876-7828042)
chr5 (15-179)||(6315728-6315893)
chr5 (17-153)||(8724986-8725123)
chr5 (15-179)||(40899915-40900080)
chr5 (2-179)||(8698292-8698471)
chr5 (16-168)||(27542793-27542946)
chr5 (15-179)||(40530175-40530340)
chr5 (2-150)||(41496063-41496213)
chr5 (15-160)||(6753629-6753774)
chr5 (15-179)||(4818548-4818713)
chr5 (17-120)||(27580599-27580702)
chr5 (17-166)||(21060629-21060779)
chr5 (15-112)||(6754026-6754123)
chr5 (15-186)||(1248548-1248720)
chr5 (15-157)||(2232046-2232185)
chr5 (2-162)||(31655036-31655198)
chr5 (15-120)||(22848395-22848500)
chr5 (75-162)||(9515803-9515891)
chr5 (17-120)||(4441020-4441123)
chr5 (100-181)||(843519-843601)
chr5 (15-179)||(41478824-41478989)
chr5 (51-179)||(32440174-32440303)
chr5 (52-179)||(38508138-38508266)
chr5 (15-176)||(11904202-11904365)
chr5 (15-179)||(30512636-30512802)
chr5 (15-179)||(30552976-30553142)
chr5 (15-179)||(41492299-41492464)
chr5 (15-120)||(29374339-29374444)
chr5 (16-152)||(42803598-42803735)
chr5 (17-157)||(15818453-15818596)
chr5 (16-173)||(29570390-29570548)
chr5 (75-163)||(37184046-37184135)
chr5 (15-67)||(19929943-19929995)
chr5 (142-179)||(5282467-5282504)
chr5 (75-120)||(5731833-5731878)
chr5 (27-152)||(29856056-29856180)
chr5 (104-180)||(42922818-42922894)
chr5 (143-179)||(2588019-2588055)
chr5 (28-88)||(38161455-38161515)
[»] chr3 (45 HSPs)
chr3 (15-179)||(37695618-37695784)
chr3 (15-180)||(19823008-19823174)
chr3 (15-168)||(30190624-30190778)
chr3 (15-179)||(36476581-36476746)
chr3 (2-152)||(43253843-43253995)
chr3 (17-179)||(29023919-29024081)
chr3 (2-179)||(36460369-36460548)
chr3 (2-179)||(44301545-44301724)
chr3 (16-180)||(37311948-37312113)
chr3 (19-168)||(24569064-24569214)
chr3 (27-179)||(38795353-38795506)
chr3 (2-179)||(8679007-8679186)
chr3 (15-168)||(10366606-10366767)
chr3 (15-163)||(12736541-12736690)
chr3 (15-179)||(5322892-5323055)
chr3 (17-168)||(11905821-11905973)
chr3 (15-168)||(45710847-45711001)
chr3 (17-181)||(37497491-37497656)
chr3 (51-173)||(49830162-49830286)
chr3 (2-181)||(51837911-51838091)
chr3 (15-180)||(1778640-1778805)
chr3 (17-154)||(28690760-28690898)
chr3 (25-166)||(43719274-43719415)
chr3 (17-177)||(19611908-19612068)
chr3 (17-151)||(11632080-11632214)
chr3 (15-152)||(37772944-37773082)
chr3 (15-120)||(23004395-23004500)
chr3 (15-115)||(39043772-39043875)
chr3 (16-181)||(3313252-3313414)
chr3 (25-163)||(14194563-14194701)
chr3 (29-151)||(34750507-34750630)
chr3 (2-67)||(12904847-12904913)
chr3 (15-168)||(53560214-53560368)
chr3 (17-152)||(27471334-27471470)
chr3 (75-162)||(31158492-31158579)
chr3 (92-162)||(33491053-33491124)
chr3 (104-181)||(17652834-17652912)
chr3 (17-168)||(19609298-19609450)
chr3 (17-96)||(30682103-30682182)
chr3 (17-162)||(38137413-38137562)
chr3 (15-179)||(49447747-49447909)
chr3 (15-120)||(3901162-3901267)
chr3 (79-183)||(50035166-50035271)
chr3 (15-67)||(17652749-17652801)
chr3 (92-124)||(37804898-37804930)
[»] chr7 (55 HSPs)
chr7 (19-179)||(34947508-34947669)
chr7 (17-157)||(24516271-24516412)
chr7 (16-181)||(83390-83556)
chr7 (1-179)||(26974015-26974198)
chr7 (2-181)||(28103723-28103904)
chr7 (16-180)||(28202268-28202433)
chr7 (15-181)||(9785992-9786159)
chr7 (4-180)||(11373387-11373565)
chr7 (15-179)||(34100507-34100672)
chr7 (75-179)||(44180269-44180374)
chr7 (17-179)||(7463219-7463382)
chr7 (2-162)||(21350605-21350764)
chr7 (2-168)||(16904369-16904537)
chr7 (15-157)||(3178186-3178329)
chr7 (16-150)||(41506054-41506189)
chr7 (15-168)||(759062-759216)
chr7 (2-162)||(22738691-22738853)
chr7 (2-162)||(46478270-46478432)
chr7 (27-179)||(5524396-5524549)
chr7 (17-152)||(30865973-30866109)
chr7 (16-179)||(23670491-23670654)
chr7 (15-157)||(32346034-32346177)
chr7 (15-163)||(2459475-2459622)
chr7 (16-169)||(27920993-27921147)
chr7 (25-157)||(21759966-21760099)
chr7 (17-152)||(38391754-38391890)
chr7 (15-180)||(40076322-40076485)
chr7 (17-179)||(13961965-13962128)
chr7 (31-181)||(16560528-16560679)
chr7 (31-181)||(16604983-16605134)
chr7 (57-179)||(39452390-39452512)
chr7 (47-168)||(42935697-42935819)
chr7 (15-179)||(21390299-21390466)
chr7 (15-91)||(25571423-25571499)
chr7 (17-151)||(49101669-49101807)
chr7 (15-157)||(19271715-19271858)
chr7 (15-118)||(32018734-32018837)
chr7 (15-120)||(32018935-32019041)
chr7 (15-120)||(33819218-33819323)
chr7 (17-120)||(43873929-43874032)
chr7 (2-162)||(7457398-7457560)
chr7 (15-125)||(37245694-37245803)
chr7 (104-181)||(46211524-46211602)
chr7 (50-182)||(2850838-2850971)
chr7 (15-67)||(6495007-6495059)
chr7 (17-112)||(17828379-17828473)
chr7 (25-67)||(35333057-35333099)
chr7 (87-151)||(12631381-12631446)
chr7 (142-179)||(36790878-36790915)
chr7 (15-67)||(42796009-42796064)
chr7 (44-96)||(21937831-21937883)
chr7 (15-67)||(36790744-36790796)
chr7 (75-168)||(37850700-37850791)
chr7 (15-67)||(44424148-44424200)
chr7 (2-65)||(47045546-47045610)
[»] chr8 (38 HSPs)
chr8 (16-179)||(10179901-10180065)
chr8 (8-179)||(34948641-34948813)
chr8 (15-182)||(31271018-31271186)
chr8 (16-120)||(42886998-42887102)
chr8 (48-168)||(51143-51263)
chr8 (17-179)||(11976890-11977053)
chr8 (2-120)||(44761508-44761627)
chr8 (17-168)||(17719223-17719375)
chr8 (17-187)||(27294005-27294176)
chr8 (15-180)||(39482612-39482778)
chr8 (15-179)||(9300067-9300232)
chr8 (20-152)||(21216082-21216215)
chr8 (2-168)||(7172897-7173065)
chr8 (15-182)||(40996316-40996484)
chr8 (17-179)||(10097945-10098108)
chr8 (15-168)||(32476284-32476438)
chr8 (50-157)||(1875568-1875676)
chr8 (19-181)||(13335217-13335380)
chr8 (47-151)||(42972490-42972595)
chr8 (16-120)||(5053167-5053271)
chr8 (15-181)||(39405759-39405926)
chr8 (2-179)||(45425620-45425799)
chr8 (17-170)||(4428315-4428468)
chr8 (15-67)||(29226595-29226647)
chr8 (17-179)||(31082618-31082781)
chr8 (16-67)||(32678401-32678452)
chr8 (104-170)||(32678804-32678871)
chr8 (17-119)||(17823920-17824022)
chr8 (15-179)||(31231727-31231893)
chr8 (75-164)||(36967418-36967508)
chr8 (15-120)||(396625-396730)
chr8 (75-182)||(2767242-2767350)
chr8 (75-177)||(39300894-39301000)
chr8 (52-120)||(41092028-41092096)
chr8 (75-161)||(7703128-7703215)
chr8 (15-120)||(22771849-22771954)
chr8 (16-89)||(35732119-35732192)
chr8 (100-179)||(6611779-6611859)
[»] chr4 (55 HSPs)
chr4 (17-179)||(38405061-38405224)
chr4 (15-180)||(49428300-49428466)
chr4 (17-174)||(2653419-2653575)
chr4 (15-179)||(33790690-33790855)
chr4 (16-180)||(52247386-52247551)
chr4 (2-180)||(32884784-32884964)
chr4 (2-179)||(17237255-17237434)
chr4 (2-179)||(47464324-47464503)
chr4 (17-182)||(11907555-11907721)
chr4 (15-179)||(36985783-36985948)
chr4 (15-179)||(47772978-47773143)
chr4 (15-180)||(49175892-49176058)
chr4 (15-179)||(7061623-7061788)
chr4 (2-180)||(34360638-34360818)
chr4 (25-180)||(52859757-52859913)
chr4 (17-179)||(11288589-11288751)
chr4 (17-179)||(5841386-5841550)
chr4 (17-183)||(2066788-2066955)
chr4 (17-179)||(17114439-17114602)
chr4 (15-179)||(16821290-16821455)
chr4 (2-180)||(6643618-6643798)
chr4 (75-168)||(51625140-51625234)
chr4 (16-179)||(6609759-6609924)
chr4 (16-145)||(35380326-35380456)
chr4 (16-166)||(42616875-42617026)
chr4 (50-150)||(42517626-42517727)
chr4 (25-181)||(44536153-44536310)
chr4 (15-148)||(49746958-49747091)
chr4 (17-152)||(35311209-35311345)
chr4 (15-162)||(39397341-39397489)
chr4 (16-179)||(43237241-43237405)
chr4 (51-173)||(28500856-28500979)
chr4 (45-163)||(30192232-30192351)
chr4 (20-185)||(2942598-2942763)
chr4 (17-179)||(22130042-22130209)
chr4 (77-163)||(27880217-27880303)
chr4 (18-179)||(53346759-53346921)
chr4 (15-120)||(21240723-21240828)
chr4 (16-179)||(38502441-38502605)
chr4 (15-162)||(40122830-40122978)
chr4 (15-67)||(51624783-51624835)
chr4 (16-67)||(18741546-18741597)
chr4 (15-176)||(461955-462117)
chr4 (75-168)||(8175550-8175644)
chr4 (17-158)||(30682176-30682318)
chr4 (15-117)||(50264102-50264204)
chr4 (53-152)||(46396869-46396969)
chr4 (53-179)||(4972595-4972722)
chr4 (27-164)||(3689571-3689709)
chr4 (15-121)||(47358967-47359073)
chr4 (17-66)||(31370373-31370422)
chr4 (75-179)||(32469907-32470012)
chr4 (53-157)||(52869107-52869212)
chr4 (15-67)||(19265805-19265857)
chr4 (104-163)||(25141889-25141949)
[»] scaffold0110 (1 HSPs)
scaffold0110 (15-180)||(1701-1867)
[»] chr6 (27 HSPs)
chr6 (15-179)||(11655898-11656063)
chr6 (16-181)||(13087528-13087694)
chr6 (16-181)||(29363304-29363470)
chr6 (15-162)||(181553-181700)
chr6 (10-179)||(23142659-23142829)
chr6 (15-179)||(6801928-6802093)
chr6 (15-179)||(15058114-15058279)
chr6 (10-168)||(1955942-1956101)
chr6 (3-168)||(3291731-3291898)
chr6 (17-180)||(21010172-21010340)
chr6 (4-152)||(1781789-1781937)
chr6 (17-181)||(6834319-6834484)
chr6 (4-162)||(3720210-3720370)
chr6 (15-180)||(31894161-31894327)
chr6 (15-136)||(24983444-24983566)
chr6 (28-180)||(32440596-32440749)
chr6 (16-151)||(13909422-13909558)
chr6 (15-180)||(15582280-15582446)
chr6 (17-67)||(34657627-34657677)
chr6 (27-120)||(1063615-1063708)
chr6 (15-96)||(11143623-11143704)
chr6 (16-96)||(30716898-30716978)
chr6 (15-66)||(15046121-15046171)
chr6 (15-120)||(1225045-1225149)
chr6 (75-120)||(4590610-4590655)
chr6 (18-67)||(5302351-5302400)
chr6 (15-67)||(13206897-13206949)
[»] scaffold0330 (1 HSPs)
scaffold0330 (17-179)||(5389-5552)
[»] chr2 (41 HSPs)
chr2 (15-168)||(39691487-39691641)
chr2 (15-174)||(45235578-45235738)
chr2 (17-183)||(16463688-16463855)
chr2 (15-168)||(37322425-37322580)
chr2 (10-159)||(16805873-16806023)
chr2 (10-159)||(16845154-16845304)
chr2 (15-179)||(25637478-25637642)
chr2 (2-151)||(5789627-5789778)
chr2 (2-179)||(17695313-17695492)
chr2 (15-180)||(39785582-39785751)
chr2 (15-183)||(36794281-36794450)
chr2 (15-182)||(14523320-14523488)
chr2 (15-181)||(15359036-15359203)
chr2 (2-120)||(35313870-35313989)
chr2 (100-181)||(26607917-26607999)
chr2 (19-168)||(43410427-43410577)
chr2 (17-180)||(36354393-36354557)
chr2 (25-159)||(43115773-43115908)
chr2 (15-120)||(8947063-8947168)
chr2 (75-163)||(19937734-19937823)
chr2 (17-137)||(17346356-17346476)
chr2 (15-158)||(31448665-31448809)
chr2 (16-174)||(34120395-34120552)
chr2 (15-66)||(5272204-5272255)
chr2 (17-152)||(16377634-16377774)
chr2 (17-119)||(35242309-35242411)
chr2 (16-162)||(3323254-3323387)
chr2 (15-120)||(43699610-43699712)
chr2 (17-67)||(26863422-26863472)
chr2 (17-67)||(39329728-39329777)
chr2 (15-67)||(9458330-9458382)
chr2 (15-163)||(18853167-18853317)
chr2 (142-181)||(5272142-5272181)
chr2 (136-179)||(30544402-30544445)
chr2 (75-181)||(32783421-32783527)
chr2 (15-153)||(34225587-34225726)
chr2 (17-67)||(19937384-19937434)
chr2 (17-67)||(32831239-32831289)
chr2 (98-179)||(39443793-39443875)
chr2 (15-60)||(7494909-7494954)
chr2 (15-67)||(11742592-11742644)
[»] scaffold0182 (1 HSPs)
scaffold0182 (19-179)||(20306-20467)
[»] scaffold0159 (1 HSPs)
scaffold0159 (2-151)||(34000-34151)
[»] scaffold0583 (1 HSPs)
scaffold0583 (15-179)||(2022-2187)
[»] scaffold1809 (1 HSPs)
scaffold1809 (2-120)||(697-816)
[»] scaffold1391 (1 HSPs)
scaffold1391 (75-181)||(1768-1875)
[»] scaffold0302 (1 HSPs)
scaffold0302 (15-180)||(16095-16261)
[»] scaffold0095 (1 HSPs)
scaffold0095 (15-181)||(50201-50368)
[»] scaffold0328 (1 HSPs)
scaffold0328 (15-175)||(7938-8099)
[»] scaffold0294 (1 HSPs)
scaffold0294 (80-179)||(17097-17197)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-179)||(135990-136153)
[»] scaffold0012 (1 HSPs)
scaffold0012 (15-120)||(105681-105786)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-67)||(14234-14297)
[»] scaffold0470 (1 HSPs)
scaffold0470 (100-179)||(1067-1147)


Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 6 - 292
Target Start/End: Complemental strand, 5179530 - 5179237
Alignment:
Q  6 actgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattga 104  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  5179530 actgttatactcttatttcctgaatttcatccaatttatctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgctattga 5179431  T
Q  105 aatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaactttcatgggttagtt 203  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5179430 aatcaacacaattaatcattttgttaagaatcgtgtacaaaccttaaacgactgttatttagagatggagggagtattatctaactttcgtgggttagtt 5179331  T
Q  204 tggtttctt-----nnnnnnnntctaacttaggaattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcatt 292  Q
    |||||||||             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179330 tggtttcttaaaaaaaaaaaaatctaacttagggattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcatt 5179237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 39864094 - 39864273
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | | | ||||||||||| |||| ||||| | |    
T  39864094 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtattttagtaaatgctactaattttacca 39864193  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| ||||||||||    
T  39864194 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaactttaaacgactataatttagagacggagggagta 39864273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 16395165 - 16395003
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| |||||||||||||||||||||| | | | | |||||||||||||||| ||||| ||||  |||||||||||||    
T  16395165 ttatttattgaatttcatctaacttaactactccactaactacaattaaaaag-gtattttagtaaatgatactaattttactatcaaaatcaacacaat 16395067  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||| |||| ||||||| | ||||||||||| |||||| || | ||| ||||||||||    
T  16395066 taatcattttcttaataatcgtgcataaaccttaaacgactatttttaaaagacggagggagta 16395003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 49224107 - 49223942
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  49224107 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 49224008  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||  || |||| |  || ||||||| ||||||||||||||| ||||||||||    
T  49224007 attaatcattttcttagtaaccgtgcatcaatcttaaacgactattatttagagacggagggagta 49223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 31978773 - 31978607
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| || ||| ||| |||||||| |||||| |||||||| |   | |||||||| ||||| | ||||| | |||||||||||||||    
T  31978773 ccttatttaatgaatttaattcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacaca 31978674  T
Q  115 attaatattttg-ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| |||||||||||    
T  31978673 attaatctttttcttaataatcgtgcacaaactttaaacgactataatttagagacggagggagtat 31978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 9307612 - 9307772
Alignment:
Q  4 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 102  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||| | | |   ||||||||||| || | |||||   |||    
T  9307612 ccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcatt 9307711  T
Q  103 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||| ||||| ||||  |||| ||||||||||||||||||||| |||| ||||    
T  9307712 gaaatcaacacagttaatcatttccttaataatcgtgtacaaaccttaaacgactaatatt 9307772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 12039065 - 12039237
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||| ||||||| |||  ||||||| ||||||||||||||| | |    |||||||||| |||| ||||| | |    
T  12039065 ttccactattatacccttatttattgaattacatccaacttaaatactccattaactacaattaataagagtgtattagtaaatgttactaattttacca 12039164  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatgga 172  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  ||||||||    
T  12039165 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagatgga 12039237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 2572468 - 2572626
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||| ||| ||| ||||||||||||||||||||||||  || | |||||||||||||| | ||||| | ||||||||||| |||||    
T  2572468 ttatttattgaatttcattcaacttaactactccactaactacaattaataattgta-tttagtaaatgatattaattttaccattgaaatcaatacaat 2572566  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 175  Q
    |||| ||| | |||| ||||||  |||||| |||||| ||||| ||||| ||| ||||||    
T  2572567 taatcattattttaataatcgtacacaaactttaaacgactataatttaaagacggaggg 2572626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 11449877 - 11450045
Alignment:
Q  10 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 109  Q
    |||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||  ||   | ||| |||| ||  | ||||| | ||||||||||    
T  11449877 ttataccttatttattgaatttcatccaattttactactctattaactacaattaataaatgtgttatagaaaattat--taattttaccattgaaatca 11449974  T
Q  110 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||| ||||||  ||||  |||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  11449975 acataattaaccatttccttaataatcgtgcacaaaccttaaacaactattatttagagacggaaggagta 11450045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 38787338 - 38787505
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |     ||| | ||||||||||  |||| | ||  |||||||||||    
T  38787338 ccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaatcaacaca 38787437  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    || ||| ||||  |||| ||||||| | ||||||||||| ||||||||||||||| || |||||||||    
T  38787438 atcaatcatttccttaataatcgtgcataaaccttaaacgactattatttagagacggggggagtatt 38787505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 26093391 - 26093545
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| |||||| || |||  |||| |||||||||||||||||| |   | |||| ||||||||| | ||||| | |||||||||||||||    
T  26093391 ccttatttattgaacttcatctaacttaattacttcactaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacaca 26093490  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| || ||||||||||||    
T  26093491 attaatcattttcttaataatcgtgcacaaatcttaaacgaccattatttagaga 26093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 917021 - 917174
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||| ||| ||| ||| || ||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |    
T  917021 ccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacata 917120  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagag 167  Q
    |||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||    
T  917121 attaatcatttatttaataatcgtgcacaaaccttaaacgactataatttagag 917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 24991786 - 24991609
Alignment:
Q  4 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 102  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| ||| ||||||||||||||||||||   |   | ||||||||  || | ||||| |  ||    
T  24991786 ccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgtt 24991687  T
Q  103 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||| ||||  |||| ||||||||||    
T  24991686 gaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacggagggagta 24991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 7759212 - 7759336
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| ||| |||||||||||||||||||| | | | |||||||||||||| | ||||  | |||||||||||||||    
T  7759212 ccttatttattgaatttcattcaacttaactattccactaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacaca 7759311  T
Q  115 attaa-tattttgttaagaatcgtg 138  Q
    ||||| |||||| |||| |||||||    
T  7759312 attaattatttttttaataatcgtg 7759336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 20209961 - 20209799
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| ||||  ||||||||| |    
T  20209961 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacata 20209862  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 176  Q
    |||||| ||||| |||| ||  ||| |  | | |||||| ||||||||||||||| |||||||    
T  20209861 attaatcattttcttaataacggtgcatcacctttaaacgactattatttagagacggaggga 20209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 40144968 - 40144803
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  40144968 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 40144869  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| ||  ||| |  || ||| ||| |||||||||||||||| |||||||||    
T  40144868 attaatcattttcttaataactgtgcatcaatcttgaacgactattatttagagattgagggagta 40144803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 8896451 - 8896335
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||||||||  |  | |||||||||||||| | ||||| | |||||||||||||||||    
T  8896451 ttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaat 8896352  T
Q  117 taat-attttgttaaga 132  Q
     ||| ||||| ||||||    
T  8896351 caatcattttcttaaga 8896335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 15699119 - 15699274
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  15699119 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 15699218  T
Q  115 attaat--attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    ||||||   |||| |||| ||  ||| |  |||||||||| |||||||||||||||    
T  15699219 attaatcatttttcttaataactgtgcatcaaccttaaacgactattatttagaga 15699274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 36701919 - 36702023
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36701919 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36702018  T
Q  116 ttaat 120  Q
    |||||    
T  36702019 ttaat 36702023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 36718023 - 36718127
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36718023 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36718122  T
Q  116 ttaat 120  Q
    |||||    
T  36718123 ttaat 36718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 42409993 - 42410145
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||| ||||||| | ||| |||  | ||||||||||||||||| | |  ||||||||||||||| | ||||| | ||  |||||||||||||    
T  42409993 ttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaat 42410092  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||| ||||| |||| || |||| |  ||||||||||||||||||||||||||    
T  42410093 taatcatttttttaataaccgtgcatcaaccttaaacaactattatttagaga 42410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 31042796 - 31042959
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||| ||| |||  |||| ||||| |||||||||||| | | | |  ||||||||||||| ||||| | |||||||||||||||||    
T  31042796 ttatttattgaatttcattcaacttaattacttcactacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaat 31042895  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  31042896 taatcatttccttaataatcatgcacaaaccttaaatgactaatattgtgagacggagggagta 31042959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 32970652 - 32970521
Alignment:
Q  51 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 149  Q
    |||||| |||||||||| | | | |||||||||| ||| | |||||   ||||||||||||||||||||| ||||| |||| |||||| ||| |||||||    
T  32970652 actaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataatcgtatacgaacctta 32970553  T
Q  150 aacaactattatttagagatggagggagtatt 181  Q
    ||| | |||||||| ||||| |||||||||||    
T  32970552 aacgaatattattttgagatagagggagtatt 32970521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 10495838 - 10496003
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||| | |||   |||||||||||||||| ||||| | ||  ||||||||| ||    
T  10495838 ttatttattgaatttcatccaacttaactactccactaattacaattaataaagtg--ttttagtaaatgatactaattttaccatcaaaatcaacaaaa 10495935  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaaca---actattatttagagatggagggagta 179  Q
    ||||| ||||| |||| |||| |  | ||||||||||||   | |||||||||||||| |||||||||    
T  10495936 ttaataatttttttaataatcttacataaaccttaaacaattagtattatttagagatagagggagta 10496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 34031647 - 34031481
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||| |||  |  ||| | ||||||||||||||||||   | | |||||||||||||| | ||||| | |||| |||||||||||    
T  34031647 cttatttattgaatttcattcaaccttactattacactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaa 34031548  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaaca-actattatttagagatggagggagtat 180  Q
     |||| ||||  |||| |||| || |||||||||||||| ||||| ||||||||| |||||||||||    
T  34031547 gtaatcatttccttaataatcatgcacaaaccttaaacagactataatttagagacggagggagtat 34031481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 13579742 - 13579573
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || |||  ||||||||||||||||||||||||| |   ||| |||||||||| | || |||  ||  |||||||||||    
T  13579742 ccttatttattgaatttcatcaaacttaaatactccactaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacaca 13579643  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 183  Q
    |||||| ||||  |||| |||| || | ||||||||||  | ||||| ||||||| ||| ||||||||||    
T  13579642 attaatcatttctttaataatcatgcataaaccttaaatgattattacttagagacggatggagtattat 13579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 37276458 - 37276563
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  37276458 ccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacaca 37276557  T
Q  115 attaat 120  Q
     |||||    
T  37276558 gttaat 37276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 6160580 - 6160426
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    |||| |||| |||||| ||| ||| ||| ||| |||| ||||||||||||||| | | | |||||||||| ||||| |||||   |||||||||||||||    
T  6160580 ccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacaca 6160481  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||| |||| ||||||  ||||  | ||||| |||||||||| ||||    
T  6160480 attaatcattttcttaaaaatcgtacacaagtcgtaaacgactattattttgaga 6160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 37506121 - 37506289
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatga---tactcattttgctattgaaatcaac 111  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   |   ||||||||||||   |||| |||||   ||  ||||||||    
T  37506121 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaac 37506220  T
Q  112 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| | ||||||||||||| ||||||||||    
T  37506221 acaattaatcatttccttaataaccgtgcatcaaccttaaacgattattatttagagacggagggagta 37506289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 26258061 - 26257956
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||||||  |||||||||| |||  || || |||||| || |||||||   | | |||||||||||||| ||||||||||||||||||||| |||    
T  26258061 ccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaaatcaataca 26257962  T
Q  115 attaat 120  Q
    ||||||    
T  26257961 attaat 26257956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 27721531 - 27721644
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||| |||||||||| ||| || ||||||||||||||||||  | |||||| ||||| | | | ||||| | ||| ||||||||||| |    
T  27721531 ttatttattgaattttatccaatttaactattctactaactacaattaatattggtactttaataaataaaaataattttaccattaaaatcaacacatt 27721630  T
Q  117 taatattttgttaa 130  Q
    ||||||||| ||||    
T  27721631 taatatttttttaa 27721644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 52429341 - 52429506
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||| ||||||| | | | ||| | || | |||||||  |    
T  52429341 ccttatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaa 52429440  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||  || | ||||||| ||||||||||||| |  || ||||||||| ||||||||||    
T  52429441 attaatcatttccttcataatcgtgcacaaaccttaaacgataataatttagagacggagggagta 52429506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 23169054 - 23168966
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||| |||||| |||| ||||||| |||||| |||||| |||| ||||    
T  23169054 tttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgcacaaactttaaacgactaatatt 23168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 14757729 - 14757610
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| | ||||||||| || ||| ||||| |||||||||||||||||| | |   ||||||||||| |||| |||||        
T  14757729 ttccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataagagtgttttagtaaatgttactaattttatcg 14757630  T
Q  101 ttgaaatcaacacaattaat 120  Q
    ||||||||||||||||||||    
T  14757629 ttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 6023760 - 6023666
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 119  Q
    |||||||||||||| ||| |||||||| |||||||||||||||   | | ||||||||| | |||| | ||| | ||||||||||||||||||||    
T  6023760 tgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaatcaacacaattaa 6023666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 35682866 - 35682761
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt-gttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||| ||||||||||| || ||   ||||||||||||||||||||| |||| ||||| ||||||| ||||||| || || |||||||||| ||||||||     
T  35682866 tttaataaatgatactaatgttatcattgaaatcaacacaattaatcttttcgttaaaaatcgtgcacaaacc-tatacgactattattttgagatggaa 35682768  T
Q  174 ggagtat 180  Q
    |||||||    
T  35682767 ggagtat 35682761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 41121917 - 41121778
Alignment:
Q  44 ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt----gttaagaatcgtgt 139  Q
    |||||||||||||||||||||||| | | | |||||||||| || || ||||| | ||  |||||||||||||||||  |||     |||| ||  |||     
T  41121917 ctactccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgtgc 41121818  T
Q  140 acaaaccttaaacaactattatttagagatggagggagta 179  Q
    | ||||||||||||||||||||||||||| ||| ||||||    
T  41121817 ataaaccttaaacaactattatttagagacggaaggagta 41121778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 6785239 - 6785304
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaat 66  Q
    ||||||| ||||||| ||||||| ||||||||||| || ||| |||||||||||||||||||||||    
T  6785239 ttccactattatacccttatttattgaatttcatcaaacttaactactccactaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 28749000 - 28749125
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 125  Q
    |||||||||||| ||| | | || ||||| ||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||     
T  28749000 aatttcatccaacttaacaattctactaattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 28749099  T
Q  126 gttaagaatcgtgtacaaaccttaaa 151  Q
     |||| ||||||| ||||| ||||||    
T  28749100 cttaataatcgtgcacaaatcttaaa 28749125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 33733383 - 33733230
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| | |  || | |||| |||||||||||||||||   | | ||||||||||| || | ||||| | |||||||||||||||    
T  33733383 ccttatttattgaatttcattctacctaaccactctactaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacaca 33733284  T
Q  115 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    || |  ||||  |||| ||||||| |||||| |||||| ||||| |||| ||||    
T  33733283 ataatcatttccttaataatcgtgcacaaactttaaacgactataatttggaga 33733230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 45331339 - 45331502
Alignment:
Q  19 atttactgaatttcatccaatttagcta---ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    ||||| |||| ||||||||| ||| |||   ||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| ||    
T  45331339 atttattgaacttcatccaacttaactattcctccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataa 45331438  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 178  Q
    ||||| ||||| |||| || ||||    |||||||||| |||||||||||||||||||| ||||    
T  45331439 ttaattattttcttaataaccgtgcgtcaaccttaaacgactattatttagagatggagagagt 45331502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 25089207 - 25089155
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  25089207 ccttatttattgaatttcatccaacttaactacttcactaactacaattaata 25089155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 35367799 - 35367851
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  35367799 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 35367851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 44707895 - 44707776
Alignment:
Q  2 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||| || || ||||||||||||||||||  ||   ||||||||||  |||| |||||   |    
T  44707895 ttccactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatca 44707796  T
Q  101 ttgaaatcaacacaattaat 120  Q
    |||||||||| | |||||||    
T  44707795 ttgaaatcaatataattaat 44707776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 52009298 - 52009259
Alignment:
Q  253 aatttgacagcggcttttgggaaagaaagttatattcatt 292  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52009298 aatttgacagcggctattgggaaagaaagttatattcatt 52009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 24880874 - 24880970
Alignment:
Q  19 atttactgaatttcatccaatttag---ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 112  Q
    ||||| |||||||||||||| |||    ||||||||||||||||||||||||   | | |||||||||||||| | ||||| | |||||||||||||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaaca 24880970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 27687298 - 27687404
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaac-tattatttagagatgga 172  Q
    |||||||||| ||| | ||||| | |||||||||||||||| |||| ||||| |||| ||| ||| ||||||||||||  || ||| ||||||||| |||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagacttataatttagagacgga 27687397  T
Q  173 gggagta 179  Q
    |||||||    
T  27687398 gggagta 27687404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 22856356 - 22856307
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaat 66  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  22856356 ttatttattgaatttcatccagcttaactactccactaactacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 31154126 - 31154230
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||||||||||||||| || |||   |||| || ||||||||||||||  || | ||||||| || ||||| |||||   ||| ||||||||||||    
T  31154126 cttatttactgaatttcatcaaacttaagcactctaccaactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaa 31154225  T
Q  116 ttaat 120  Q
    |||||    
T  31154226 ttaat 31154230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 6267917 - 6267823
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    ||||||| ||||||||  ||||   ||| ||||||||||||||||| ||||  |||| ||| ||| ||||||||||||| |||||||||| ||||    
T  6267917 tttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgactattattttgaga 6267823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 37539124 - 37539174
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaa 65  Q
    ||||||||| ||||||||||| || ||| |||||| |||||||||||||||    
T  37539124 ccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4441722 - 4441674
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaa 65  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||||    
T  4441722 ttatttattaaatttcatctaatttaattactccactaactacaattaa 4441674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 7828042 - 7827876
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||    
T  7828042 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacaca 7827943  T
Q  115 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||| |||||| |||| ||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  7827942 attaattattttcttaataatcgtgtacaaaccttaaacgattattatttagagacggagggagtat 7827876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 6315893 - 6315728
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | |||||   |||||||| ||||||    
T  6315893 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacaca 6315794  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || ||| ||||  |||| ||||| |||||| |||||||| ||||| ||||||||| ||||||||||    
T  6315793 atcaatcatttccttaataatcgagtacaacccttaaacgactataatttagagacggagggagta 6315728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 8725123 - 8724986
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |||   |||||||||||||| | ||||| | |||||||||||||||||    
T  8725123 ttatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaatcaacacaat 8725024  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaaca 153  Q
    |||| ||||  |||| ||||||| ||||||||||||||    
T  8725023 taatcatttctttaataatcgtgcacaaaccttaaaca 8724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 40899915 - 40900080
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||||| ||  |||||||||||    
T  40899915 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacaca 40900014  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||  |||| || |||| | ||||||||||  |||||||||||||||| ||| |||||    
T  40900015 attaatcatttccttaataaccgtgcataaaccttaaatgactattatttagagatagagagagta 40900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 8698292 - 8698471
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| | |||||||||||||||||||||| | |   ||| |||||||  ||| ||||| | |    
T  8698292 ttccactattatacccttatttattgaatttcatccaacttaaccactccactaactacaattaataagggtgttttggtaaatgcaactaattttacca 8698391  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||||| | ||||  |||| ||||||||||    
T  8698392 ttgaaatcaacacaattaatcatttctttaataatcgtgcacaaaccttaaacaacaaatattgtgagacggagggagta 8698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 27542793 - 27542946
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | ||||||||||| || | ||||| | ||||||||||||||||    
T  27542793 cttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaa 27542892  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    | ||| ||||  |||| ||||||| ||||||||||||| || || |||||||||    
T  27542893 tcaatcatttccttaataatcgtgcacaaaccttaaacgacaataatttagaga 27542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 40530340 - 40530175
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||||||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  40530340 ccttatttatttaatttcatccaacttaaccactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacaca 40530241  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| ||||||| ||| ||||||||| || | ||||  |||| ||||||||||    
T  40530240 attaatcattttcttaataatcgtgcacagaccttaaacgacaaatattgtgagacggagggagta 40530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 41496063 - 41496213
Alignment:
Q  2 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgct 99  Q
    ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||| |||  |  |||| ||||||  ||| ||||| |     
T  41496063 ttccactattatacctttatttattgcatttcatccaatttaactactccactaactacaattaataatgatg-ttttactaaatgcaactaattttacc 41496161  T
Q  100 attgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaa 150  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  41496162 attgaaatcaacacaattaattatttttttaataatcgtgtacaaaccttaa 41496213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 6753774 - 6753629
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||| || | |    
T  6753774 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-a 6753676  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactatta 160  Q
    |||||| ||||| |||| ||||||| | ||||||||||| |||||||    
T  6753675 attaatcattttcttaataatcgtgcataaaccttaaacgactatta 6753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 4818548 - 4818713
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || |||   |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  4818548 ccttatttattgaatttcatctaacttaatcactccactaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacaca 4818647  T
Q  115 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||| |||||  |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||    
T  4818648 attaattatttccttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagta 4818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 27580599 - 27580702
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | |||||||||||||||||    
T  27580599 ttatttaattaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaat 27580698  T
Q  117 taat 120  Q
    ||||    
T  27580699 taat 27580702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 21060629 - 21060779
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | |||||||||| ||||| ||||| | ||  |||| ||||||||    
T  21060629 ttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaat 21060728  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 166  Q
    |||| ||||   ||| || |||| | ||||||||||| |||||||||||||    
T  21060729 taatcatttccctaataaccgtgcataaaccttaaacgactattatttaga 21060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 6754026 - 6754123
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 112  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||| | | ||||| |||||||||||||||    
T  6754026 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca 6754123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 1248720 - 1248548
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||| | ||||||| || ||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | ||||| | ||||||||||||| |    
T  1248720 ccttattaattgaattttattcaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacata 1248621  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatcta 186  Q
    |||||| ||||  |||| || |||| ||||| ||||||| |||||| |||| ||| ||| | ||||| |||||    
T  1248620 attaataatttccttaataaccgtgcacaaatcttaaacgactattttttaaagacggatgaagtatcatcta 1248548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 2232185 - 2232046
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    |||||||| | |   |||| |||||| |||| ||||| | |||||||||||||||    
T  2232185 ccttatttattgaatttcatccaacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattgaaatcaacaca 2232090  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    |||| | ||||| |||| ||||||| ||||||||||||| ||||    
T  2232089 attattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 31655036 - 31655198
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||| |||  ||  ||||||||||||||||||||||| |   | | |||||||||||| | ||||| | |    
T  31655036 ttccactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataaggatattatagtaaatgatattaattttacca 31655135  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||||||||||| ||||  |||| ||||||  |||||| |||||| |||| ||||    
T  31655136 ttgaaatcaacacaattaatcatttctttaataatcgtacacaaactttaaacgactaatatt 31655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 22848500 - 22848395
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||||||| || |||||||| ||||||||||||||| | |   |||| |||||  || | ||||| |||||||||||||||||    
T  22848500 ccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaatactattaattttactattgaaatcaacaca 22848401  T
Q  115 attaat 120  Q
    ||||||    
T  22848400 attaat 22848395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 9515803 - 9515891
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||| ||| | |||| ||||||| ||||||||||||| |||| ||||    
T  9515803 tttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacgactaatatt 9515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 4441020 - 4441123
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||     | |||||||||| ||| | |||||   ||| |||||||||||||    
T  4441020 ttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaacacaat 4441119  T
Q  117 taat 120  Q
    ||||    
T  4441120 taat 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 843519 - 843601
Alignment:
Q  100 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||| |||||||  |||| ||||||||||||    
T  843519 attgaaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggagtatt 843601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 41478824 - 41478989
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| ||||||||||| || ||| ||| |||| ||||| ||||||| | | |  | |||||||||||| ||| ||||| | |||||||| | |||    
T  41478824 ccttatttattgaatttcatctaacttaacta-tccattaactgcaattaacaagggatattttagtaaatgacactaattttaccattgaaataagcac 41478922  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||| ||||| |||| ||||| | |||||||||| || |||||||||||||||| ||| |||||    
T  41478923 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttagagatagagagagta 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 32440174 - 32440303
Alignment:
Q  51 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 149  Q
    ||||| ||||||||||| | | | |||||||||||||| | |||||   |||||||| |||||||||||| ||||  |||| |||| || |||||||||     
T  32440174 actaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaaaccttt 32440273  T
Q  150 aacaactattatttagagatggagggagta 179  Q
    ||| |||||||||| |||| ||||||||||    
T  32440274 aacgactattattttgagacggagggagta 32440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 38508266 - 38508138
Alignment:
Q  52 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaa 150  Q
    |||||||||||||||| | | | |||| | | ||||||| ||||| | |||||||| |||||||||||| ||||| |||| ||||| | ||||| |||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  151 acaactattatttagagatggagggagta 179  Q
    || |||||||||| |||| ||| ||||||    
T  38508166 acgactattattttgagacggatggagta 38508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 11904202 - 11904365
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaatt-aatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||| ||| ||| ||| ||| |||||| ||||||||| |||||||||| |||| | | | |||||||||||||| | |||||  ||||||| |||| ||    
T  11904202 ccttaattattgatttttatcgaatttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattgaactcaatac 11904301  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 176  Q
    ||||||| | ||| ||||  |||||| |||||| |||||| ||||||| ||| ||| |||||||    
T  11904302 aattaatcactttcttaaagatcgtgcacaaacattaaacgactattaattaaagagggaggga 11904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 30512802 - 30512636
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30512802 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30512703  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30512702 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30512636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 30553142 - 30552976
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30553142 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30553043  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30553042 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 41492299 - 41492464
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| ||||||||||| || ||| ||| |||| |||||||| |||| | | |  | |||||||||||  ||| ||||| | |||||||| | |||    
T  41492299 ccttatttattgaatttcatctaacttaacta-tccattaactacatttaacaagggatattttagtaaatgtcactaattttaccattgaaataagcac 41492397  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||| ||||| |||| ||||| | |||||||||| || ||||||||||| |||||||| |||||    
T  41492398 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttaaagatggagagagta 41492464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 29374339 - 29374444
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||   |   ||||||||||| || | |||||   ||||||||||||| |    
T  29374339 ccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacata 29374438  T
Q  115 attaat 120  Q
    ||||||    
T  29374439 attaat 29374444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 42803735 - 42803598
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||| | |||||| |||||||||||||||   |   ||||||||||  |||| ||||| | |||||||| |||||||    
T  42803735 cttatttattgaatttcatccaacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaa 42803636  T
Q  116 ttaa-tattttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||| |||||  || | ||||||| | |||||||||||    
T  42803635 ttaattatttctttgataatcgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 15818596 - 15818453
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa--atgatactcattttgctattgaaatcaacaca 114  Q
    ||||||| | |||||||||||||||| |||||||||| | |||||||||||   |   ||||||||  ||| |||| ||||| | |||||||||||||||    
T  15818596 ttatttattaaatttcatccaatttaactactccactgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacaca 15818497  T
Q  115 att-aatattttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    ||| || ||||  |||| ||||||| | ||||||||||| ||||    
T  15818496 attaaacatttccttaataatcgtgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 29570390 - 29570548
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||| ||| |||| |||||||||||||||   |   ||||| ||||  || | |||||   ||| ||||||||||||    
T  29570390 cttatttattgaatttcatccaacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaa 29570489  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    ||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||||||||    
T  29570490 ttaatcatttctttaataatcgtgcacaaatcttaaacgactaatattgtgagatggag 29570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 37184135 - 37184046
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |||||||||||||| | ||||| | |||||||||||| |||||||| ||||| |||| |||| || ||||| |||||| | |||||||||    
T  37184135 tttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaaaaatcttgcacaaaacttaaagatctattattt 37184046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 19929943 - 19929995
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||||||||||||| ||| ||| | ||||||||||||||||||    
T  19929943 ccttatttattgaatttcatccaacttaactatttcactaactacaattaata 19929995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 5282467 - 5282504
Alignment:
Q  142 aaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  5282467 aaaccttaaacaactattattttgagctggagggagta 5282504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 5731833 - 5731878
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 120  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||    
T  5731833 tttagtaaatgatacacattttgttattaaaatgaacacaattaat 5731878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 29856056 - 29856180
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttg 126  Q
    |||| ||| ||| ||| |||||||||||||||||||||||| | | | ||||| || ||||| | |||||   |||||||||||| |||||  |||||      
T  29856056 aattgcattcaacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaatcaacgcaatt-ttatttcc 29856154  T
Q  127 ttaagaatcgtgtacaaaccttaaac 152  Q
    |||| ||||||| ||||| |||||||    
T  29856155 ttaataatcgtgcacaaatcttaaac 29856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 42922894 - 42922818
Alignment:
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||||||||||||||| ||||| |||| |||| || ||||| ||||||| ||||| |||||||| ||| ||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataatttagagttgg-gggagtat 42922818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 2588055 - 2588019
Alignment:
Q  143 aaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  2588055 aaccttaaacgactattatttagagacggagggagta 2588019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 38161515 - 38161455
Alignment:
Q  28 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata 88  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |   | ||||||||||||||    
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaatgata 38161455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 37695784 - 37695618
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  37695784 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 37695685  T
Q  115 attaat-attttgttaagaatcgtgtac-aaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||  |||| ||||||| || ||||||||||| ||||||||||||||| ||||||||||    
T  37695684 attaatcatttccttaataatcgtgcacaaaaccttaaacgactattatttagagacggagggagta 37695618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 19823008 - 19823174
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||||||||| | |   |||||||||||||||| ||| | | ||  |||||||||||    
T  19823008 ccttatttattgaatttcatccaacttaactattccactaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacaca 19823107  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||  |||| ||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  19823108 attaatcatttccttaataatcgtgcacaaaccttaaacaactataatttagagacagagggagtat 19823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 30190778 - 30190624
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||| | |||||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  30190778 ccttattaattgaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacaca 30190679  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||  || | || |||| ||||||||||||| |||||| ||||||||    
T  30190678 attaatcatttccttcataaccgtgcacaaaccttaaacgactattttttagaga 30190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 36476581 - 36476746
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | |||||||||||||| | ||||| | |||| ||||||||||    
T  36476581 ccttatttattgaatttcatcaaacttaactactctactaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacaca 36476680  T
Q  115 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || || |||||| |||| || |||| |||||||||||||||| || ||||||||| ||||||||||    
T  36476681 atcaattattttcttaataaccgtgaacaaaccttaaacaacaataatttagagacggagggagta 36476746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 43253995 - 43253843
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  43253995 ttccactattatacccttatttaatgaatttcatcccacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 43253896  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||    
T  43253895 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaac 43253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 29024081 - 29023919
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |  |  |||||||||||||||| ||||| | ||  |||||||||||||    
T  29024081 ttatttattgaatttcatccaacttaattactccactaactacaattaataagatgt-tttagtaaatgatactaattttaccatcaaaatcaacacaat 29023983  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||| |||| ||||||| | ||||||||||| ||||||| |||| || ||||||||||    
T  29023982 taatcatttttttaataatcgtgcataaaccttaaacgactattaattagtgacggagggagta 29023919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 36460548 - 36460369
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  ||||||| ||||||||||||||| |   | |||| |||||| |||| ||||| |||    
T  36460548 ttccactattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataagaatattttaataaatgttactaattttacta 36460449  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||| |||||||||||| ||||| |||| ||||||| |||||| |||||| |||| ||||   ||||||||||||||    
T  36460448 ttgaaattaacacaattaataattttcttaataatcgtgcacaaactttaaacgactaatattgtaagatggagggagta 36460369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 44301545 - 44301724
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||||||||| ||||||| ||| | | | |||||||||||||||| |||||   |    
T  44301545 ttccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataagggtattttagtaaatgatactaattttatca 44301644  T
Q  101 ttgaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||| |||| |||||||  |||| | ||| | ||||||||||||| || ||||||| |||| ||||||||||    
T  44301645 ttgaaatcaacataattaaatatttccttaaaagtcgggcacaaaccttaaacgaccattattttgagacggagggagta 44301724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 37311948 - 37312113
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||||||  |||||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||    
T  37311948 cttatttattgaatttcattaaatttaactactccactaactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaa 37312047  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| | |||||||||    
T  37312048 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacgtagggagtat 37312113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 24569214 - 24569064
Alignment:
Q  19 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 118  Q
    ||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||||||    
T  24569214 atttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaatta 24569115  T
Q  119 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    || ||||| |||| ||||||| | ||| ||||| | ||||| |||||||||    
T  24569114 atcattttcttaataatcgtgcataaatcttaagcgactataatttagaga 24569064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 38795353 - 38795506
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 125  Q
    |||||||||||| ||| | ||||||| |||||||||||||| | | | ||  |||||||||||| ||||| | |||||||| |||||||||||| ||||     
T  38795353 aatttcatccaacttaacaactccaccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttc 38795452  T
Q  126 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
     ||||  |||||| |||||| |||||| |||||||||| |||||||||||||||    
T  38795453 cttaaatatcgtgcacaaacattaaacgactattattttgagatggagggagta 38795506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 8679186 - 8679007
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  || | ||||||||| |||||||| |     ||||||||||| |||| ||||| | |    
T  8679186 ttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttacca 8679087  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||||| ||||  |||| ||||||| | ||| ||||||| ||||| ||||||||| ||||||||||    
T  8679086 ttgaaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgactataatttagagacggagggagta 8679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 10366767 - 10366606
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgt-------ggactttagtaaatgatactcattttgctattgaaat 107  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||  |       |   |||| ||||||||||| ||||| | ||||||||    
T  10366767 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaat 10366668  T
Q  108 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    ||||||||||||| ||||| |||| ||||||| ||||||||||||| ||| |||||||||||    
T  10366667 caacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactgttatttagaga 10366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 12736690 - 12736541
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||| ||||||||||| | | | | |||||||||||||| |||||   |||  ||||||||||    
T  12736690 ccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacaca 12736591  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |||||| ||||  |||| ||||||| |||||| |||||||||||||||||    
T  12736590 attaatcatttccttaaaaatcgtgcacaaactttaaacaactattattt 12736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 5323055 - 5322892
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| |||||  ||||| || |||||||| ||| | |||||||||||||| | |||||   | ||||||||||| |    
T  5323055 ccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaatcaacata 5322956  T
Q  115 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||  ||| |||| ||||||| ||||||||||||||||||| ||||| ||| |||| |||||    
T  5322955 attaatcattt-ttaataatcgtgcacaaaccttaaacaactataatttaaagacggagtgagta 5322892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 11905821 - 11905973
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| | |||||| ||||||||||||||| | |  ||||||||||||||||| |||||   ||  |||| ||||||||    
T  11905821 ttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaat 11905920  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||| ||||| |||| ||||||| | |||| |||||| | |||||||||||||    
T  11905921 taatcattttcttaataatcgtgcataaactttaaacgagtattatttagaga 11905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 45710847 - 45711001
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  45710847 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacata 45710946  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||| |||| || |||| |  |||||||||| |||||||||||||||    
T  45710947 attaatcattttcttaacaaccgtgcatcaaccttaaacgactattatttagaga 45711001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 37497491 - 37497656
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||| |||| |   |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  37497491 ttatttattgaatttcatccaacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 37497590  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
     ||| ||||  |||| ||||||| | ||| ||||||| | ||||||||||||| ||| ||||||||    
T  37497591 aaatcatttccttaataatcgtgcataaatcttaaacgattattatttagagacggatggagtatt 37497656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 173
Target Start/End: Original strand, 49830162 - 49830286
Alignment:
Q  51 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat--attttgttaagaatcgtgtacaaacctt 148  Q
    |||||||||||||||||   | | |||||||||||||| | ||||| |||||||||||||||||||||||   |||| |||| ||||||| |||||| ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  149 aaacaactattatttagagatggag 173  Q
    |||| ||||| ||||||||| ||||    
T  49830262 aaacgactataatttagagacggag 49830286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 51838091 - 51837911
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||| |||  || ||||||||||| |||||| ||||| | | | |||||||||||||| | |||||   |    
T  51838091 ttccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataagggtattttagtaaatgatattaattttatca 51837992  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||||||||||||||||| ||||  |||| | || || ||||||||||||  ||||| ||||||||| || |||||||||    
T  51837991 ttgaaatcaacacaattaatcatttacttaatactcatgcacaaaccttaaatgactataatttagagacgg-gggagtatt 51837911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1778640 - 1778805
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| ||||| |     |||||||||||  | | |||||   |||||||||||||||    
T  1778640 ccttatttattgaatttcatccaacttatctactccactaactacaa-taataaggatgttttagtaaatgtcattaattttatcattgaaatcaacaca 1778738  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||  |||| |||| || ||||||||||||| |||| ||||  |||| |||||||||||    
T  1778739 attaatcatttccttaataatcatgcacaaaccttaaacgactaatattgtgagacggagggagtat 1778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 28690898 - 28690760
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||   ||||||||||||||||||     | |||||||||||||| | ||||| |  ||||||||||||||||    
T  28690898 ttatttattgaatttcatccaacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaatcaacacaat 28690799  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaa 154  Q
    |||| ||||  |||| ||||||| |||||||||||||||    
T  28690798 taatcatttctttaataatcgtgcacaaaccttaaacaa 28690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 43719274 - 43719415
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |     || ||| ||||||| | ||||| | ||| ||||||||||||||||| |||    
T  43719274 tgaattccatccaatttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatcatt 43719372  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaactattatttaga 166  Q
    || ||||  ||||||||||||| |||| | |||||||||||||    
T  43719373 ttattaatgatcgtgtacaaactttaaccgactattatttaga 43719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 19611908 - 19612068
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| ||||||||||||| |||||||||| |   | |||||||||| ||| | |||||   |||||||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaat 19612006  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 177  Q
    |||| | ||| |||| ||||||  |||||| |||||||| |||||| | |||| ||||||||    
T  19612007 taatcactttcttaaaaatcgtacacaaactttaaacaattattatctcgagacggagggag 19612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 11632080 - 11632214
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| ||  ||||||||||||||||||||   |   ||||||||||  |||| ||||| |  ||||||||||||||||    
T  11632080 ttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaat 11632179  T
Q  117 taatattttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||  ||| |||| ||||||| ||||| ||||||    
T  11632180 taatcattttttaataatcgtgcacaaatcttaaa 11632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 37773082 - 37772944
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| ||| |||||| |||| |||||||| | | | |||||||||||||| | ||||| | |||| |||||| |||    
T  37773082 ccttatttaatgaatttcattcaacttaactattccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaataca 37772983  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||||| ||||  |||| |||| || |||||||||||||    
T  37772982 attaatcatttccttaataatcatgcacaaaccttaaac 37772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 23004500 - 23004395
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | |   ||||||| ||  |||| ||||| | ||||||||| |||||    
T  23004500 ccttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacaca 23004401  T
Q  115 attaat 120  Q
    ||||||    
T  23004400 attaat 23004395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 39043875 - 39043772
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac---tcattttgctattgaaatcaac 111  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   | | |||||||||||||||   | ||||| | ||||||||||||    
T  39043875 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaac 39043776  T
Q  112 acaa 115  Q
    ||||    
T  39043775 acaa 39043772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 3313252 - 3313414
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| |||  ||||||| ||||||||||||||| | |   |||||| |||  |||| ||||| | ||||||||| ||| ||    
T  3313252 cttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgacataa 3313351  T
Q  116 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |    ||||| |||| ||||||| ||||||||||||| |||| ||||  ||| |||| ||||||||    
T  3313352 t---cattttcttaataatcgtgcacaaaccttaaacgactaatattgtgaggtggatggagtatt 3313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 14194563 - 14194701
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    |||||||||||||| |||  |||||||||||| |||||| |||   | | ||||||||||| |||| |||||   |||||||||||||||||| || |||    
T  14194563 tgaatttcatccaacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaatcaacacaattgatcatt 14194661  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |  |||| ||||||| ||||||||||||| ||| ||||||    
T  14194662 tctttaaaaatcgtgcacaaaccttaaacgactgttattt 14194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 34750507 - 34750630
Alignment:
Q  29 tttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgt 127  Q
    |||||||||| ||| ||||||||| |||||||||||||| |     |||||||||||||||| ||||| | ||| ||||||||||||| ||| ||||  |    
T  34750507 tttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcatttcat 34750606  T
Q  128 taagaatcgtgtacaaaccttaaa 151  Q
     || ||||||| ||||||||||||    
T  34750607 caaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 12904847 - 12904913
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||||    
T  12904847 ttccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaata 12904913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 53560214 - 53560368
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||| ||| ||| |||||| |||||||| | |||||| | |   |||||||||||||||  ||||| | ||  ||||||||| |    
T  53560214 ccttatttattgaacttcattcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacata 53560313  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||  ||||  |||||| |  ||||||||||||||||||||||||||    
T  53560314 attaatcatttccttaatcatcgtgcatcaaccttaaacaactattatttagaga 53560368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 27471334 - 27471470
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||| ||| ||| |||||||||||  || |||||||| | |   |||||||||||  ||| ||||  | ||||||||||||| |||    
T  27471334 ttatttattgaatttcattcaacttaactactccactacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataat 27471433  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||| ||||| |||| ||||||| ||||| |||||||    
T  27471434 taatcattttcttaataatcgtgcacaaatcttaaac 27471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 31158579 - 31158492
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||||||||||| || | ||||| |||| ||||||| ||||||||||  ||| |||| ||||||| ||||||||||||| |||| ||||    
T  31158579 tttagtaaatgttattaattttactatcgaaatcagcacaattaatcattttttaataatcgtgcacaaaccttaaacgactaatatt 31158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 33491124 - 33491053
Alignment:
Q  92 attttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||||| ||||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  33491124 attttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatatt 33491053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 17652834 - 17652912
Alignment:
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||||||||||||||| ||||  |||| ||||||| | |||||| |||| ||||||||||||||| ||| ||||||||    
T  17652834 aaatcaacacaattaatcatttccttaataatcgtgcataaacctcaaacgactattatttagagacggatggagtatt 17652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 19609298 - 19609450
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||| ||| || ||| ||||||||||||| |||| ||||| |   | ||| |||||||||| | ||||| | ||||||||||||||||     
T  19609298 ttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaatcaacacaaa 19609397  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||| ||||| |||| | || |  ||||| ||||||| | |||||||| ||||    
T  19609398 taatcattttcttaaaattcatacacaaatcttaaacgattattattttgaga 19609450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 30682182 - 30682103
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 96  Q
    ||||||| |||||||| ||||| |||  || |||| ||||||||||||||| |   | ||||||||||||||||||||||    
T  30682182 ttatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaatgatactcatttt 30682103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 38137562 - 38137413
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatg---atactcattttgctattgaaatcaacac 113  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |||||| |   | ||||||| |||    |||| ||||| ||||||||||| ||||    
T  38137562 ttatttattgaatttcatcgaatttaactaccccactaactacagttaataagaatattttagtagatgtcagtactaattttactattgaaatcgacac 38137463  T
Q  114 aattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||| || |||||  || | |||| || ||||||||||||| |||| ||||    
T  38137462 aatgaattatttcatttataatcatgcacaaaccttaaacgactaatatt 38137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 49447909 - 49447747
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | ||||||||| |||||| ||| || ||||||||||||||||| | | | ||| |||||| ||| |  ||| |   ||||||||||||||    
T  49447909 ccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtattttggtaaataatattattttcg---ttgaaatcaacaca 49447813  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| |||| |||||  |||||  |||||| |||||| |||| || || ||||| || ||||||    
T  49447812 attaatcatttcgttaattatcgtacacaaacattaaacgactaatagtttgagatagatggagta 49447747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 3901267 - 3901162
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| |||  ||| ||||||||||||| ||||| |     |||||||||||||| | |||||   |||||||| || |||    
T  3901267 ccttatttattgaatttcatccaacttaagtaccccactaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaataca 3901168  T
Q  115 attaat 120  Q
    ||||||    
T  3901167 attaat 3901162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 50035271 - 50035166
Alignment:
Q  79 gtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 177  Q
    ||||||| |||| |||||  |||||||||||||| ||||| | ||||| |||| |||| || ||||||||||||   ||| ||||  |||| ||||||||    
T  50035271 gtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaaccttaaaagtctaatattgtgagacggagggag 50035172  T
Q  178 tattat 183  Q
    ||||||    
T  50035171 tattat 50035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 17652749 - 17652801
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||    
T  17652749 ccttatttattaaatttcatccaacttaactacctcactaactacaattaata 17652801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 37804898 - 37804930
Alignment:
Q  92 attttgctattgaaatcaacacaattaatattt 124  Q
    ||||| |||||||||||||||||||||||||||    
T  37804898 attttactattgaaatcaacacaattaatattt 37804930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 6e-34; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 34947508 - 34947669
Alignment:
Q  19 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 118  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||||||    
T  34947508 atttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaatta 34947607  T
Q  119 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || ||||  |||| || | || ||||||||||||| ||||||||||||||| ||||||||||    
T  34947608 atcatttctttaataaacatgcacaaaccttaaacgactattatttagagacggagggagta 34947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 24516412 - 24516271
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |||||||||||||||||    
T  24516412 ttatttattgaatttcatccaacttaactactccactaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaat 24516313  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||||    
T  24516312 taatcattttattaataatcgtgtataaaccttaaacgacta 24516271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 83390 - 83556
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||||||| || ||| ||||||| |||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||    
T  83390 cttatttattgaatttcatcaaacttaactactccgctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaa 83489  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  83490 ttaatcatttccttaataattgtgcataaaccttaaacgactattatttagagacggagggagtatt 83556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 26974015 - 26974198
Alignment:
Q  1 cttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa---atgatactcatttt 96  Q
    |||||||| |||||| || ||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | ||||||||   |||||| | |||||    
T  26974015 cttccactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaatttt 26974114  T
Q  97 gctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
     | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||| ||||||    
T  26974115 accattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggaaggagta 26974198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 28103723 - 28103904
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| | ||| |||||||||||||||||| | |   ||| ||||||| | || ||||| | |    
T  28103723 ttccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgctaattttacca 28103822  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||||    
T  28103823 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagtatt 28103904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 28202433 - 28202268
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||||||||| |     |||||||||||| | | ||||| | ||  ||||||||||||    
T  28202433 cttatttattgaatttcatccaactttactactccactaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaa 28202334  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||| ||||| |||| || |||| | ||||||||||||||||||||||||||| ||| |||||||    
T  28202333 ttaattattttcttaataaccgtgcataaaccttaaacaactattatttagagacggatggagtat 28202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 9785992 - 9786159
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||||||||||||||| | |   |||||||||||| | | ||||| | ||  |||||||||||    
T  9785992 ccttatttattgaattttatccaacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacaca 9786091  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||| ||||  |||| ||||||| ||| ||||||||| ||||||||||||||| ||| ||||||||    
T  9786092 attaatcatttccttaataatcgtgcacagaccttaaacgactattatttagagacggatggagtatt 9786159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 11373565 - 11373387
Alignment:
Q  4 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 102  Q
    ||||| |||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||     
T  11373565 ccactattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccatc 11373466  T
Q  103 gaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||||||||||||| || ||||  |||| ||||||| |||| |||||||| |||| ||||  || | |||||||||||    
T  11373465 gaaatcaacacaattaaacatttccttaataatcgtgcacaatccttaaacgactaatattgtgaaacggagggagtat 11373387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 34100672 - 34100507
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||| |||||||| ||| ||||| || |||||||||||||||     | ||||||||||| |||| ||||| |||||||||||||||||    
T  34100672 ccttatttattgaatgtcatccaacttaactacttcagtaactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacaca 34100573  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| ||||||  ||||| |||||||||||| ||||  |||| ||| ||||||    
T  34100572 attaatcattttcttaataatcgttgacaaatcttaaacaactaatattgtgagacggatggagta 34100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 44180269 - 44180374
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||||||||| ||||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  44180269 tttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatttagagacggag 44180368  T
Q  174 ggagta 179  Q
     |||||    
T  44180369 agagta 44180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 7463219 - 7463382
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||  | | | || |||||||| |||| |||||   |||||||||||||||||    
T  7463219 ttatttattgaatttcatccaacttaactactccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaat 7463318  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| || |||| |||| |||||||| |||| ||||  |||| ||||||||||    
T  7463319 taatcatttccttaataaccgtgcacaatccttaaacgactaatattacgagacggagggagta 7463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 21350764 - 21350605
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||   |||  |||| | |    
T  21350764 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatacaactatttttacca 21350665  T
Q  101 ttgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||||||||||||||||||  ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  21350664 ttgaaatcaacacaatta--atttccttaataatcgtgcacaaaccttaaacgactaatatt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 16904369 - 16904537
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| ||||||| |||||| |||  || | ||||||||| |||||||| | | | ||||| || ||||| | ||||| |||    
T  16904369 ttccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttacta 16904468  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||||||||||||||||| ||||| |||| |||  || ||||||||||||| |||||||||| ||||    
T  16904469 ttgaaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgactattattttgaga 16904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 3178329 - 3178186
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  |||||||||||    
T  3178329 ccttatttattgaatttcatccaacttaactactccactaactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 3178230  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    || ||| ||||  |||| |||| || ||||||||||||||||||    
T  3178229 atcaatcatttacttaataatcatgcacaaaccttaaacaacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 41506189 - 41506054
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||| |||| |||||||    
T  41506189 cttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaa 41506090  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaa 150  Q
    ||||| ||||  |||| ||||||| | |||||||||    
T  41506089 ttaatcatttccttaataatcgtgcataaaccttaa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 759216 - 759062
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  |||||||||||    
T  759216 ccttatttattgaatttcatccaacttaactactccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacaca 759117  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||  |||| ||| ||| | ||||||||||  |||||||||||||||    
T  759116 attaatcatttccttaataattgtgcataaaccttaaatgactattatttagaga 759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 22738691 - 22738853
Alignment:
Q  2 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||||| ||||| | |||||||||||| ||| ||| || ||||||||||||||||  |   | |||||||||||||||| ||||| | |    
T  22738691 ttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttacca 22738790  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||| ||||||||||| ||||  |||| ||||||| | ||||||||||| |||| ||||    
T  22738791 ttgaaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaatatt 22738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 46478432 - 46478270
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||| | ||||||||||||||| | | | ||||||||||| |||| | ||| |||    
T  46478432 ttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttacta 46478333  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    || |||| |||||||||||| ||||  |||| |||||||||  ||| |||||| |||| ||||    
T  46478332 ttaaaattaacacaattaatcatttaattaataatcgtgtatgaactttaaacgactaatatt 46478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 5524396 - 5524549
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 125  Q
    |||||||||||| ||| |||||| |||||||| ||||||||   |   |||| |||||| |||| ||||| | ||||||||||||||||||||| |||||    
T  5524396 aatttcatccaacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttaccattgaaatcaacacaattaatcatttt 5524495  T
Q  126 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
     |||| ||||||| |||||| |||||| || | ||||  |||||||||||||||    
T  5524496 cttaataatcgtgcacaaactttaaacgacaaatattgtgagatggagggagta 5524549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 30865973 - 30866109
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| |||||||||||| || |||||||| | | | |||||||||||||| | ||| | | |||||||| ||||||||    
T  30865973 ttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaat 30866072  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  30866073 taatcatttctttaataatcgtgcacaaaccttaaac 30866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23670491 - 23670654
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| | ||||||||| || ||| |||||||||||||||| ||||||| | |   ||||||||||| || | ||||| | || |||||||||||||    
T  23670491 cttatttattaaatttcatcaaacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaa 23670590  T
Q  116 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||   |||| ||| ||| ||||||||||||| | || ||||  |||| ||||||||||    
T  23670591 ttaatattcccttaataattgtgcacaaaccttaaacgattaatattgtgagacggagggagta 23670654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 32346177 - 32346034
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| |||||||||||| || |||||||| | | | ||||||| |||||| | ||||| | |||||||||||||||    
T  32346177 ccttatttattgaatttcattcaacttaactactccactaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacaca 32346078  T
Q  115 attaa-tattttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    || || |||||  |||| || |||  ||||||||||||||||||    
T  32346077 atcaattatttccttaataaccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 2459475 - 2459622
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   | |||||||||  ||| ||||| |  ||||||||||||||    
T  2459475 ccttatttattgaatttcatcctacttaactactccactaactacaattaataagggtgttgtagtaaatg--actaattttaccgttgaaatcaacaca 2459572  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |||||| ||||  |||| ||||||| |||||| |||||| |||| |||||    
T  2459573 attaatcatttccttaataatcgtgcacaaacattaaacgactaatattt 2459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 27920993 - 27921147
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||| | |||| ||||||||| ||| ||| | |||||||||||||||||| | |   |||| ||||||||||| ||||| | ||| ||||||||| ||    
T  27920993 cttattgattgaacttcatccaacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataa 27921092  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagat 169  Q
    ||||| ||||| |||| ||  ||| |  |||||||||||||||||||||||||||    
T  27921093 ttaatcattttcttaataactgtgcatcaaccttaaacaactattatttagagat 27921147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 21760099 - 21759966
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    |||||||||||||| ||| |||||||| |||||||||||| || | |   |||| ||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  21760099 tgaatttcatccaacttaactactccattaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcatt 21760000  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    || |||| |||| || ||||||||||||| ||||    
T  21759999 ttcttaataatcatgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 38391754 - 38391890
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||| | | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  38391754 ttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 38391853  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||| ||||| |||| ||| ||| | |||||||||||    
T  38391854 taatcattttcttaataattgtgcataaaccttaaac 38391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 40076322 - 40076485
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||| ||   ||| |||||||||||   |   |||||||||||||||| ||||| | ||  |||| ||||||    
T  40076322 ccttatttattgaatttcatccaacttaactaatc---taagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacaca 40076418  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||| || |||||||    
T  40076419 attaatcatttctttaataatcgtgcataaaccttaaacgactattatttagagattgaaggagtat 40076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 13961965 - 13962128
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||||||| ||| ||||||||||||||||| |||||| |   | |||| ||| ||||| | |||||   ||| |||||||||||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaat 13962064  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| || |||| | ||||||||||  ||||||||||||||  ||||||||||    
T  13962065 taatcatttccttaataaacgtgcataaaccttaaatgactattatttagaggcggagggagta 13962128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 16560679 - 16560528
Alignment:
Q  31 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 129  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16560580  T
Q  130 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16560579 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16560528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 16604983 - 16605134
Alignment:
Q  31 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 129  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16605082  T
Q  130 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16605083 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16605134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 39452390 - 39452512
Alignment:
Q  57 tacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaact 156  Q
    ||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| | | | |||||| ||||  || |||| |||||||||||| |||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacatattaattatttttttaaagattgtgtccaaaccttaaacgact 39452489  T
Q  157 attatttagagatggagggagta 179  Q
    |||||||||||||||||| ||||    
T  39452490 attatttagagatggaggaagta 39452512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 42935697 - 42935819
Alignment:
Q  47 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 145  Q
    ||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||| |||| || |||| |  |||    
T  42935697 ctccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaac 42935796  T
Q  146 cttaaacaactattatttagaga 168  Q
    ||||||| |||||||||||||||    
T  42935797 cttaaacgactattatttagaga 42935819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 21390299 - 21390466
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||| |||| |     |||||||||||||| |  |||| | ||  |||| ||||||    
T  21390299 ccttatttattgaatttcatctaacttaactactccactaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacaca 21390398  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaac--tattatttagagatggagggagta 179  Q
    |||||| ||||  |||| ||||||| | ||||||||||| ||  ||||||||||||| ||| ||||||    
T  21390399 attaatcatttccttaataatcgtgcataaaccttaaacgactgtattatttagagacggatggagta 21390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 25571423 - 25571499
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactc 91  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||| ||||| | | | |||||||||||||||||    
T  25571423 ccttatttattgaatttcatccaacttaactattccactaactacaactaataagggtattttagtaaatgatactc 25571499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 49101669 - 49101807
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactt---tagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||||| | | ||   |||||||||||| | |||||    || |||| |||||    
T  49101669 ttatttattgaatttcattcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatccttaaaataaacac 49101768  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||||| ||||| |||| ||||||  ||||||||||||    
T  49101769 aattaatcattttcttaaaaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 19271858 - 19271715
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | | |||||||||| ||| ||||||||||||||||||||||||   | | |||||| ||||  ||| ||||    |||||||||||||||    
T  19271858 ccttatttattaattttcatccaacttaactactccactaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacaca 19271759  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 157  Q
    |||||| ||||| |||| ||||||| |||| | |||||| ||||    
T  19271758 attaatcatttttttaataatcgtgcacaagcattaaacgacta 19271715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 32018837 - 32018734
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | ||||| |||||| |||  ||||| |||||| |||||||||| | | | ||||||||||||||   ||||| |||||||||||||||||    
T  32018837 ccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactattgaaatcaacaca 32018738  T
Q  115 atta 118  Q
    ||||    
T  32018737 atta 32018734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 32019041 - 32018935
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt-gaaatcaacac 113  Q
    ||||||||| | |||||||||||| |||  |||||||||||| |||||||||| | | | ||||||||||||||   ||||| |||||  ||||||||||    
T  32019041 ccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacac 32018942  T
Q  114 aattaat 120  Q
    |||||||    
T  32018941 aattaat 32018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 33819218 - 33819323
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||  ||||||||| ||| |||||||||| | |   ||| ||||||| |||| ||||| | |||||||||||||||    
T  33819218 ccttatttaatgaatttcattcaacttcactactccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacaca 33819317  T
Q  115 attaat 120  Q
    ||||||    
T  33819318 attaat 33819323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 43873929 - 43874032
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | || ||||||||| ||| ||||||||||||||||| |||||| | |   |||||||||||||| | ||||| | ||  |||||||||||||    
T  43873929 ttatttattaaacttcatccaacttaactactccactaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaat 43874028  T
Q  117 taat 120  Q
    ||||    
T  43874029 taat 43874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 7457560 - 7457398
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| |||||| |||||||| ||||||| ||  || |||  || ||| ||||||||| |||||| | |   |||||||||||  ||| ||||| | |    
T  7457560 ttccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataagggtcttttagtaaatgtaactaattttacca 7457461  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||| ||||||| ||||| |||| ||||||| |||||| ||||| ||||| ||||    
T  7457460 ttgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaaataactaatatt 7457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 37245694 - 37245803
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| | |||||||| | ||||||||||| | |   ||||||||||| |||| | ||| | ||||||||||||| |    
T  37245694 ccttatttattgaatttcatccaacttaaccactccacttattacaattaataagagtgttttagtaaatgctact-aatttaccattgaaatcaacaga 37245792  T
Q  115 attaatatttt 125  Q
    |||||| ||||    
T  37245793 attaatctttt 37245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 46211524 - 46211602
Alignment:
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||||||||||||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  46211524 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 46211602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 2850971 - 2850838
Alignment:
Q  50 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 148  Q
    ||||||||| |||||||  | | | |||||||||| ||| | |||||   ||||||||||||| ||||||| ||||  |||| |||| || ||||||| |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  149 aaacaactattatttagagatggagggagtatta 182  Q
    |||| ||||| ||||||||| ||| |||||||||    
T  2850871 aaacgactataatttagagacggatggagtatta 2850838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 6495059 - 6495007
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  6495059 ccttatttattaaatttcatccaactttactactccactaactacaattaata 6495007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 17828473 - 17828379
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 112  Q
    ||||||| |||||| ||||||| |||  ||||||||||||||||||| ||| | | | ||| |||||||||| | ||||| | |||||||||||||    
T  17828473 ttatttattgaatt-catccaacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaaca 17828379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 35333057 - 35333099
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||||| || ||| ||||||||||||||||||||||||    
T  35333057 tgaatttcatctaacttaactactccactaactacaattaata 35333099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 12631381 - 12631446
Alignment:
Q  87 tactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 151  Q
    |||| ||||| ||||||||||||| |||||||| |||||  |||| ||||||| ||||||||||||    
T  12631381 tactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaaccttaaa 12631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 36790878 - 36790915
Alignment:
Q  142 aaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  36790878 aaaccttaaacgactattatttagagacggagggagta 36790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 42796009 - 42796064
Alignment:
Q  15 ccttatttactgaatttcatccaatttagc---tactccactaactacaattaata 67  Q
    ||||||||| |||||||||||||| ||| |   |||||||||||||||||||||||    
T  42796009 ccttatttaatgaatttcatccaacttaacaactactccactaactacaattaata 42796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 21937883 - 21937831
Alignment:
Q  44 ctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 96  Q
    |||||||||||||||||||||||| | |  ||||||||||||| ||| |||||    
T  21937883 ctactccactaactacaattaataagagtgctttagtaaatgacactaatttt 21937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 36790744 - 36790796
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||||||||||| |  || |||||| |||||||||||||||||    
T  36790744 ccttatttattgaatttcatccgacataactactcaactaactacaattaata 36790796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 37850791 - 37850700
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||||||| ||||| |||||   ||| ||||||| || |||||| ||||| | || |||||||||||||| |||||||| |||||||| ||||    
T  37850791 tttagtaaatcatactaatttt---attaaaatcaataccattaattattttttaaaaaatcgtgtacaaactttaaacaattattattttgaga 37850700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 44424148 - 44424200
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||| ||||||||| |||  |||||||||||||||| ||||||    
T  44424148 ccttatttattgaacttcatccaacttaattactccactaactacatttaata 44424200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 47045610 - 47045546
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaa 65  Q
    ||||||| |||||| |||||||  |||||||||||||| ||| ||||| ||||||| ||||||||    
T  47045610 ttccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 10180065 - 10179901
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||| | |||||||||| ||| ||| |||||||||||||||||||||||| ||| | |||||||||| ||||| ||||| | ||||||||||| ||||    
T  10180065 cttattaattgaatttcattcaacttaactactccactaactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaa 10179966  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
     || | ||||| |||| ||||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  10179965 ctactcattttcttaataatcgtgcacaaaccttaaacgactattttttagagacggagggagta 10179901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 34948813 - 34948641
Alignment:
Q  8 tgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaat 107  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||   ||  |||||||||||| ||||| ||||| ||||    
T  34948813 tgttataccttatttattgaatttcatccaacttaactactccactaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaat 34948714  T
Q  108 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||||| ||||  |||| ||| ||||||||| ||||||| | ||||||| | ||| ||| ||||||    
T  34948713 caacacaattaatcatttccttaataattgtgtacaaatcttaaacgattattattcaaagacggatggagta 34948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 31271018 - 31271186
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||| | | | ||||||| |||||| | ||||| | ||| |||||||||||    
T  31271018 ccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacaca 31271117  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 182  Q
    || ||| ||||| |||| ||||||  ||||||||||||| ||||| |||||||| |  |||||||||||    
T  31271118 atcaatcattttcttaataatcgtacacaaaccttaaacgactataatttagaggtttagggagtatta 31271186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 42886998 - 42887102
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||| |||||| ||| |||| |||||||||||||||||||   | | |||||||||||||||| ||||||||||||||||||||||||    
T  42886998 cttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaatcaacacaa 42887097  T
Q  116 ttaat 120  Q
    |||||    
T  42887098 ttaat 42887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 51143 - 51263
Alignment:
Q  48 tccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacc 146  Q
    ||||||||||||||||||||  ||   ||| |||||||||||| ||||| | ||| ||||||||||||||||| ||||| |||| ||||||| |||||||    
T  51143 tccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatcgtgcacaaacc 51241  T
Q  147 ttaaacaactattatttagaga 168  Q
    ||||||||||||||||||||||    
T  51242 ttaaacaactattatttagaga 51263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 11977053 - 11976890
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | ||||||||||| |||| ||| | | |||||||||||||||||    
T  11977053 ttatttattgaatttcatctaacttaactactctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaat 11976954  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||   ||| |||| || ||||||||||||| |||| ||||  |||| ||||||||||    
T  11976953 taatgatttccataataatcatgcacaaaccttaaacgactaatattatgagacggagggagta 11976890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 44761627 - 44761508
Alignment:
Q  2 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| | ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  44761627 ttccactattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 44761528  T
Q  101 ttgaaatcaacacaattaat 120  Q
    ||||||||||||||||||||    
T  44761527 ttgaaatcaacacaattaat 44761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 17719375 - 17719223
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||| ||||| | ||| | ||| ||||||  |||||    
T  17719375 ttatttattaaatttcatccaacttaactactccactaactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaat 17719276  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||| ||||| |||| ||||||| ||||| ||||||| |||||||||||||||    
T  17719275 taatcatttttttaataatcgtgcacaaatcttaaacgactattatttagaga 17719223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 27294176 - 27294005
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| |||  ||||||||||||| |||||||||  |  | ||||||||| |||||| |||||   ||| |||| ||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaat 27294077  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaa 187  Q
    |||| | ||  |||| ||||||| ||||||||||| |||||||||||| ||||  || ||||||||| ||||    
T  27294076 taataacttctttaaaaatcgtgcacaaaccttaaccaactattattttgagaccgaaggagtattaactaa 27294005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 39482612 - 39482778
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| | | ||| ||| ||||||||||| |||||||| | |   ||||||||||  |||| ||||| |  ||||||||||||||    
T  39482612 ccttatttattgaatttcattccacttaactagtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacaca 39482711  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||||||||    
T  39482712 attaatcattttcttaataatcgtgcacaaatcttaaacgactaatattgtgagacggagggagtat 39482778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 9300232 - 9300067
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | ||| |||||||||||    
T  9300232 ccttatttattgaatttcattcaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacaca 9300133  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |  ||| ||||| |||| ||||||| | |||||||||||||  | ||||  |||||||||||||||    
T  9300132 aacaatcattttcttaataatcgtgcataaaccttaaacaatcaatattgtgagatggagggagta 9300067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 21216215 - 21216082
Alignment:
Q  20 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 119  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||| |     |||||||||||  ||| ||||| | ||||||||||||||||||||    
T  21216215 tttattgaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaa 21216116  T
Q  120 t-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    | ||||  |||| |||| || |||||||||||||    
T  21216115 tcatttccttaataatcatgcacaaaccttaaac 21216082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 7172897 - 7173065
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||| ||| ||| ||||| || |||||||||||||||  |    ||||||||||| |||| |||||   |    
T  7172897 ttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatca 7172996  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||||||||||||||||| ||||  |||| |||  |  ||||||||||||||||||| |||||||||    
T  7172997 ttgaaatcaacacaattaatcatttctttaataatgatacacaaaccttaaacaactataatttagaga 7173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 40996484 - 40996316
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| | | | |||||||||||||||||| | |   |||||||||||| ||| ||||| |  |  |||||||||||    
T  40996484 ccttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacaca 40996385  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 182  Q
    |||||| ||||  |||| ||| ||| | ||||||||||| | ||||||||||||| ||| |||||||||    
T  40996384 attaatcatttccttaacaattgtgcataaaccttaaacgattattatttagagacggatggagtatta 40996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 10098108 - 10097945
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   | |||||||||||| | ||||| | ||  ||||||| |||||    
T  10098108 ttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaat 10098009  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||| |||| || | || |  |||||||||| ||||||||||||| | ||||||||||    
T  10098008 taatcattttcttaataaccatgcatcaaccttaaacgactattatttagatacggagggagta 10097945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 32476284 - 32476438
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| ||||| || ||||||||||||||| | | | |||| ||||||||| | |||||   ||||||||||||| |    
T  32476284 ccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacaga 32476383  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    || ||| ||||| |||| || |||| ||||||||||||| ||| | |||||||||    
T  32476384 atcaatcattttcttaataaccgtgcacaaaccttaaacgactttaatttagaga 32476438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 1875676 - 1875568
Alignment:
Q  50 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 148  Q
    |||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||  |||| ||||||| |||||||||    
T  1875676 cactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 1875577  T
Q  149 aaacaacta 157  Q
    |||| ||||    
T  1875576 aaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 13335217 - 13335380
Alignment:
Q  19 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 118  Q
    ||||| ||||||||||| || ||| |||||| ||||||| |||||||||  ||   |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  13335217 atttattgaatttcatcaaacttaactactctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaatta 13335316  T
Q  119 a-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |  ||||  |||| ||||||| | ||||||||||| | ||||||||||||| | | ||||||||    
T  13335317 accatttccttaataatcgtgcataaaccttaaacgattattatttagagaagaatggagtatt 13335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 42972595 - 42972490
Alignment:
Q  47 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 145  Q
    |||||||||||| |||||||| | | | ||||||||| |||| | ||||| | ||||||||||| ||||||||| ||||| |||| ||||||| ||||||    
T  42972595 ctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataatcgtgcacaaac 42972496  T
Q  146 cttaaa 151  Q
    ||||||    
T  42972495 cttaaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 5053271 - 5053167
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||| |||||||||||| ||||||| |||||||||||||||| |     |||||||||||||| | ||||| | ||  ||||||||||||    
T  5053271 cttatttattgaatctcatccaatttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaa 5053172  T
Q  116 ttaat 120  Q
    |||||    
T  5053171 ttaat 5053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 39405759 - 39405926
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  39405759 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 39405858  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  39405859 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 39405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 45425799 - 45425620
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||| ||| |||  ||||||||||||||||||||||| |     |||| |||||| || | ||||| | |    
T  45425799 ttccactattatacccttatttattgaatttcatacaacttaattactccactaactacaattaataagaatgttttaataaatgttattaattttacca 45425700  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || ||||||||||||||||| ||||| |||| |||| || | ||| ||||||| |||| ||||  |||| ||| ||||||    
T  45425699 ttaaaatcaacacaattaatcattttcttaataatcatgcataaaacttaaacgactaatattatgagacggaaggagta 45425620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 4428468 - 4428315
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| ||| | ||||||||||||||||||  || | |||||||||||||| | |||||   ||| ||||||||||||     
T  4428468 ttatttattgaatttcatctaacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaa 4428369  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 170  Q
    |||| ||||| |||| |||  |  | ||||||||||| |||||||||| ||||||    
T  4428368 taatcattttcttaaaaat-atacataaaccttaaacgactattattttgagatg 4428315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 29226647 - 29226595
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  29226647 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 29226595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 31082618 - 31082781
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| | |   ||||||||||   ||| |||||   ||| ||||||| |||||    
T  31082618 ttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaat 31082717  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  ||||  |||||| ||||||| |||||||||| ||||  |||| || |||||||    
T  31082718 taatcatttccttaattatcgtgcacaaaccataaacaactaatattgtgagacggcgggagta 31082781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 32678401 - 32678452
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    |||||||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  32678401 cttatttatttaatttcatccaacttaactactccactaactacaattaata 32678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 32678804 - 32678871
Alignment:
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 170  Q
    ||||||||||||||||| ||||  |||| ||||||||| |||| |||||| |||||||||||||||||    
T  32678804 aaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatttagagatg 32678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 17823920 - 17824022
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||||||| ||| ||||| ||||||||||||||||||   | | | ||||||| |||||| |||||   |||||||||||||| ||    
T  17823920 ttatttatttaatttcatccaacttaactacttcactaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaacacgat 17824019  T
Q  117 taa 119  Q
    |||    
T  17824020 taa 17824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 31231727 - 31231893
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| || |||||| ||| |||||||||||||||||||||||| | |   || ||||||||||| | ||||| | ||  ||||| |||||    
T  31231727 ccttatttattgaactttatccaacttaactactccactaactacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacaca 31231826  T
Q  115 attaat-attttgttaagaatcgtgta-caaaccttaaacaactattatttagagatggagggagta 179  Q
    ||| || ||||  |||| || |||| | ||| | |||||  ||||||||||||||| ||||||||||    
T  31231827 attcatcatttccttaataaccgtgcatcaacctttaaaagactattatttagagacggagggagta 31231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 36967418 - 36967508
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattta 164  Q
    |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||    
T  36967418 tttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattta 36967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 396730 - 396625
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||| | ||||||| ||||||| || ||||| || ||||||||||||||| |   | | |||||||||||||| ||||| |  |||||||||||| |    
T  396730 ccttattaattgaattttatccaatataactacttcattaactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacata 396631  T
Q  115 attaat 120  Q
    ||||||    
T  396630 attaat 396625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 2767350 - 2767242
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||| ||||||||||| ||||| | ||  |||||||||||||||| |||||  |||| || |||| |  ||||| ||||||||| |||||||||| || |    
T  2767350 tttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgcatcaacctcaaacaactactatttagagacgggg 2767251  T
Q  174 ggagtatta 182  Q
    |||||||||    
T  2767250 ggagtatta 2767242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 39301000 - 39300894
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaacta---ttatttagagatg 170  Q
    |||||||||||||| | ||||| | || |||||||||| ||||||| ||||  |||| ||||||  ||||| ||||||| ||||   |||||||||||||    
T  39301000 tttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgactactattatttagagatg 39300901  T
Q  171 gagggag 177  Q
    |||||||    
T  39300900 gagggag 39300894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 41092028 - 41092096
Alignment:
Q  52 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 120  Q
    |||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttaccattgaaatcaacacaattaat 41092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 7703215 - 7703128
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattat 161  Q
    |||||||||||||| | ||||| | |||||||||||||||||||| |||||  |||| |||| |  |||||| |||||| ||||||||    
T  7703215 tttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgactattat 7703128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 22771954 - 22771849
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||||||  ||  |||| |||||||||||||||||| | |   |||| ||||||| ||| ||||| | ||  |||||||| ||    
T  22771954 ccttatttattgaatttcatccaacataattacttcactaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaaccca 22771855  T
Q  115 attaat 120  Q
    ||||||    
T  22771854 attaat 22771849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 35732119 - 35732192
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac 89  Q
    ||||| || ||||||||||| || ||  |||||||||||| ||||||||||| | | | |||||||||||||||    
T  35732119 cttatatattgaatttcatctaactttactactccactaattacaattaataggagtattttagtaaatgatac 35732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 6611779 - 6611859
Alignment:
Q  100 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  6611779 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 6611859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 9e-33; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 38405224 - 38405061
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||| ||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |||    
T  38405224 ttatttattgaatttcatccaacttaactacaccactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaat 38405125  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  38405124 taatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggagggagta 38405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 49428466 - 49428300
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||    
T  49428466 ccttatttattgaatttcatccaacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacaca 49428367  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    | |||| ||||  |||| ||||||| | ||||||||||| ||||| ||||||||| |||||||||||    
T  49428366 aataatcatttccttaataatcgtgcaaaaaccttaaacgactataatttagagacggagggagtat 49428300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 2653419 - 2653575
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | |||||||||||||||| |||||||  ||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||||    
T  2653419 ttatttattaaatttcatccaatttaactactcctttaactacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaat 2653518  T
Q  117 taatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 174  Q
    ||||  ||| |||| |||| || ||||| ||||||||||||||||||||||| |||||    
T  2653519 taatcattt-ttaataatcatgcacaaatcttaaacaactattatttagagacggagg 2653575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 33790855 - 33790690
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||| |||||| ||| ||||| | ||  |||||||||||    
T  33790855 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacaca 33790756  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| ||||||| | ||||||||||| ||||||||||||||| | ||||||||    
T  33790755 attaatcattttcttaataatcgtgcataaaccttaaacgactattatttagagacgaagggagta 33790690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 52247551 - 52247386
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |   | ||||||||||  || | ||||| | |||||||| |||||||    
T  52247551 cttatttaatgaatttcattcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaa 52247452  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||| ||||| |||| ||||||| |||| |||||||| ||||| ||||||||| |||||||||||    
T  52247451 ttaatcattttcttaataatcgtgcacaatccttaaacgactataatttagagacggagggagtat 52247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 32884784 - 32884964
Alignment:
Q  2 ttccactgttata-ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||| ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| | |   |||| |||||| |||| ||| | | |    
T  32884784 ttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctacca 32884883  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  |||| ||||| |||||    
T  32884884 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgtgagacggaggaagtat 32884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 17237434 - 17237255
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |    
T  17237434 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttacca 17237335  T
Q  101 ttgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||| ||||||||||||||| |||||| |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  17237334 ttgcaatcaacacaattaattattttcttaataatcatgcacaaaccttaaatgactagtattgtgagacggagggagta 17237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 47464503 - 47464324
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||||||||| |||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  47464503 ttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataagagttttttagtaaatgctactaattttacca 47464404  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||||||||||||| ||||  |||| |||||||  |||||||||||| |||| ||||  ||||| ||| |||||    
T  47464403 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaacgactaatattgtgagatagagagagta 47464324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 11907721 - 11907555
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  11907721 ttatttattgaacttcatccaacttaactactccaataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 11907622  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 182  Q
    |||| ||||  |||| ||||||| |  |||||||||  ||||||||||||||| |||||||||||||    
T  11907621 taatcatttccttaataatcgtgcattaaccttaaatgactattatttagagacggagggagtatta 11907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 36985783 - 36985948
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| |||  || || ||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  36985783 ccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacaca 36985882  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||  | || |||||| || ||| ||||||| | |||||||| |||| ||||||||||    
T  36985883 attaatcatttcctgaaaaatcgtataaaaatcttaaacgagtattattttgagacggagggagta 36985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 47773143 - 47772978
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  47773143 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 47773044  T
Q  115 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||| |||||  |||| ||  ||| |  |||||||||| ||||||||||||||| ||||||||||    
T  47773043 attaattatttccttaataactgtgcatcaaccttaaacgactattatttagagacggagggagta 47772978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 49176058 - 49175892
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| |||||| ||| ||||||| |||||||||||||||| |   | |||||||||||||||| |||||   |||||||||  ||||    
T  49176058 ccttatttattgaattttatccaacttaactactccgctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccaca 49175959  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||| |||| |||| || ||||||||||||| |||||||||| | |||  |||||||||    
T  49175958 attaatcattttcttaaaaatcatgcacaaaccttaaacgactattattttgtgataaagggagtat 49175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 7061788 - 7061623
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| |||  || ||||||||||||||||||||     | | |||||||||||||| ||||| | |||||||||||||||    
T  7061788 ccttatttattgaatttcattcaacttaattaatccactaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacaca 7061689  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||  |||| ||||||||||||||||||||| |||| ||||  ||||  |||||||||    
T  7061688 attaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacagagggagta 7061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 34360638 - 34360818
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| ||||||| || ||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  34360638 ttccactattatacccttatttattgaattttattcaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttacca 34360737  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||||||| ||||||||| ||||  |||| ||||||| |||||| |||||| | || ||||  |||| |||||||||||    
T  34360738 ttgaaatcaatacaattaatcatttctttaataatcgtgcacaaactttaaacgattaatattgtgagacggagggagtat 34360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 52859913 - 52859757
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  52859913 tgaatttcattcaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatt 52859814  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |  |||| ||||||| | || |||||| | ||||||||||||||| |||||||||||    
T  52859813 tccttaataatcgtgcataagccttaagcgactattatttagagacggagggagtat 52859757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 11288751 - 11288589
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| |   | |||||||||||||| | ||||||| ||||||||||| |||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagat-attttagtaaatgatattaattttgccattgaaatcaatacaat 11288653  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||| |||| ||||||  | ||||||||||| | ||| ||| ||||||||| ||||||    
T  11288652 taatcattttcttaataatcgtacataaaccttaaacgattataattcagagatggatggagta 11288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 5841550 - 5841386
Alignment:
Q  17 ttatttactgaatttcatccaatttag-ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    ||||||| |||||||||||||| |||  |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| |||||||| |||    
T  5841550 ttatttattgaatttcatccaacttaaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaa 5841451  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    | ||| ||||  |||| | | ||| ||||||||||||| ||||| ||||||||| |||| |||||    
T  5841450 tcaatcatttccttaatagttgtgcacaaaccttaaacgactataatttagagacggagagagta 5841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 2066788 - 2066955
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||||||||| || ||| |||| |||||||||| |||||||| | |   |||| ||||| ||||| | ||| | ||  |||||||||||||    
T  2066788 ttatttattgaatttcatctaacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaat 2066887  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 183  Q
    |||| ||||  |||| ||||||| | ||||||||||| ||||||||||| ||||||| ||||||||||    
T  2066888 taatcatttccttaataatcgtgcataaaccttaaacgactattatttaaagatggatggagtattat 2066955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 17114439 - 17114602
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||| ||| ||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  17114439 ttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 17114538  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| ||  ||| |  |||||||||| ||||||||||| ||| ||||||||||    
T  17114539 taatcatttccttaataactgtgcatcaaccttaaacgactattatttaaagacggagggagta 17114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 16821455 - 16821290
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| |||  |||||||||||||| |||||||| |   | | |||||||||||||| |||||   |||||||||||||||    
T  16821455 ccttatttattgaatttcattcaacttaaatactccactaactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacaca 16821356  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| |||   |||| ||||||| ||||||||||||| |||| | ||  |||| ||||||||||    
T  16821355 attaatcattgcattaataatcgtgcacaaaccttaaacgactaattttgtgagacggagggagta 16821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 6643798 - 6643618
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||  |||||||||||||||||||       ||||||||||| |||| ||||| | |    
T  6643798 ttccactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttacca 6643699  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||||||||||||||||| ||||  |||| |||||||  ||||| |||||| |||| ||||  |||| |||| ||||||    
T  6643698 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaatattgtgagacggagtgagtat 6643618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 51625140 - 51625234
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||| ||||| |||||||||    
T  51625140 tttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataatttagaga 51625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 6609759 - 6609924
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||| |||||||||| ||| |||||||| ||| |||||||||||       ||| |||||||||||| ||||| | ||  ||||||||||||    
T  6609759 cttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaatcaacacaa 6609858  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaac-aactattatttagagatggagggagta 179  Q
    ||||| ||||  |||| ||||||| | |||| |||||| |||||||||||||||| ||||||||||    
T  6609859 ttaatcatttccttaataatcgtgcataaactttaaacgaactattatttagagacggagggagta 6609924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 35380456 - 35380326
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    |||||||| |||||||||||||| ||| | ||||||||||||||||||||| |||  |  ||||||||||| |||| ||||| | ||| ||||||||| |    
T  35380456 cttatttattgaatttcatccaacttaaccactccactaactacaattaataatgatg-ttttagtaaatgctactaattttaccattaaaatcaacata 35380358  T
Q  115 attaat-attttgttaagaatcgtgtacaaac 145  Q
    |||||| ||||| |||| ||||||||| ||||    
T  35380357 attaatcattttcttaataatcgtgtataaac 35380326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 42617026 - 42616875
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||| | | ||| |||||||||| |||||||||||||     | |||||||||||||| | ||||| | |||||||||||||||     
T  42617026 cttatttattgaatttcattcgacttaactactccacttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacag 42616927  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 166  Q
    ||||| ||||  |||| |||| || ||||| ||||||| ||||| |||||||    
T  42616926 ttaatcatttctttaataatcatgcacaaaacttaaacgactataatttaga 42616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 42517727 - 42517626
Alignment:
Q  50 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 148  Q
    ||||||||| |||||||| | | | |||||||||||||  | ||||| | ||||||||||||||||||||| ||||| |||| |||||||||||||| ||    
T  42517727 cactaactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtacaaacatt 42517628  T
Q  149 aa 150  Q
    ||    
T  42517627 aa 42517626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 44536310 - 44536153
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    ||||||||||| || |||||||||||||||||||||||||||| | |   |||| |||||  | || ||||| | ||| ||||||||||||||||| |||    
T  44536310 tgaatttcatctaacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatt 44536211  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |  |||| ||||||| | |||| |||||||| || ||||  |||| ||| ||||||||    
T  44536210 tccttaataatcgtgcataaactttaaacaattaatattgtgagagggaaggagtatt 44536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 49746958 - 49747091
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||| |||||||    | | ||||||||||  |||| |||||   |||||||||||||||    
T  49746958 ccttatttattgaatttcatccaacttaactactcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacaca 49747057  T
Q  115 attaatattttgttaagaatcgtgtacaaacctt 148  Q
    ||||||  ||| |||| ||||||| |||| ||||    
T  49747058 attaattattttttaataatcgtgcacaagcctt 49747091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 35311345 - 35311209
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| | |   | |||||||||  | | ||||| | |||||||| |||| |||    
T  35311345 ttatttattgaatttcatccaacttaattactccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataat 35311246  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  35311245 taatcatttccttaataatcgtgcacaaaccttaaac 35311209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 39397341 - 39397489
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | ||||||||||| |||| ||| || | ||||||||||||||||| ||| |||||||||||| | | | ||| | | ||||||||||| |    
T  39397341 ccttatttattaaatttcatccattttaactaatctagtaactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaatcaacata 39397440  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||| ||||  ||||  |||||| |||||| |||||| | |||||||    
T  39397441 attaatcatttccttaaacatcgtgcacaaactttaaacgattattatt 39397489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 43237241 - 43237405
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||| ||||||||       ||||||||||  |||| ||||| | |||||||| |||||||    
T  43237241 cttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaa 43237340  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| ||||| ||||    
T  43237341 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacggaggcagta 43237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 28500979 - 28500856
Alignment:
Q  51 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 149  Q
    ||||||| ||||||||| | | | |||||||||||||| | ||||| | ||||||||||||||||| ||| ||||  |||| ||||||| |||||| |||    
T  28500979 actaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacatta 28500880  T
Q  150 aacaactattatttagagatggag 173  Q
    |||  |||| ||||||||| ||||    
T  28500879 aacggctataatttagagacggag 28500856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 30192232 - 30192351
Alignment:
Q  45 tactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaa 143  Q
    ||||| ||||||||||||||||| |   | ||||| |||||| | | |||||   ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  30192232 tactctactaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaaaaatcgtgtacaa 30192331  T
Q  144 accttaaacaactattattt 163  Q
    || ||||||| | |||||||    
T  30192332 acattaaacagcgattattt 30192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 2942763 - 2942598
Alignment:
Q  20 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 119  Q
    |||| |||| ||||| ||| ||| | |||||||||||||||||||||| |  |  ||||||||||| |||| |||||   || |||||||||||||||||    
T  2942763 tttattgaaattcattcaacttaaccactccactaactacaattaataaggtgt-tttagtaaatgctactaattttatcatcgaaatcaacacaattaa 2942665  T
Q  120 t-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatct 185  Q
    | ||||  |||| |||| | |||||||||||||| |||| ||||  |||| ||| | ||||||||||    
T  2942664 tcatttctttaataatcttatacaaaccttaaacgactaatattgtgagacggatgtagtattatct 2942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 22130042 - 22130209
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaac----a 112  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |     ||| |||||||||||| ||| | | ||||||||||||    |    
T  22130042 ttatttattgaatttcatccaacttaattactccactaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacata 22130141  T
Q  113 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||| ||||  |||| || |||| ||||||||||||| |||| ||||  |||| ||| ||||||    
T  22130142 caattaatcatttccttaataaccgtgcacaaaccttaaacgactaatattgtgagacggatggagta 22130209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 27880303 - 27880217
Alignment:
Q  77 tagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |||||||||||||| ||||| | ||||||||||||||||| |  ||||  |||| |||| | |||||||||||||| ||||||||||    
T  27880303 tagtaaatgatactaattttaccattgaaatcaacacaataatcatttatttaaaaatcatatacaaaccttaaacgactattattt 27880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 53346759 - 53346921
Alignment:
Q  18 tatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatt 117  Q
    |||||| ||||||||||| || ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||  ||||||||     
T  53346759 tatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatc 53346858  T
Q  118 aa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || |||||| |||| ||||||| |||||  |||||| |||| ||||   |||| |||||||||    
T  53346859 aattattttcttaataatcgtgcacaaattttaaacgactaatattgtaagatagagggagta 53346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 21240828 - 21240723
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||| |      ||||||||||||||| ||||| | ||  |||||||||||    
T  21240828 ccttatttattgaatttcatccaacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacaca 21240729  T
Q  115 attaat 120  Q
     |||||    
T  21240728 gttaat 21240723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 38502605 - 38502441
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| ||||||| |||||| ||| ||||| || |||||| ||||||||   | | |||| ||||||||||| ||||| | ||  ||||||||||||    
T  38502605 cttatttattgaattttatccaacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaa 38502506  T
Q  116 ttaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| |||||  |||| ||   || |  |||||||||| ||||||||||||||| |||| |||||    
T  38502505 ttaattatttccttaataactatgcatcaaccttaaacgactattatttagagacggagagagta 38502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 40122978 - 40122830
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||| || || ||| || |||||||||||||||| |||| | |   ||||||||||| |||| |||||   ||| |||||||| ||    
T  40122978 ccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgca 40122879  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||    
T  40122878 attaatcatttccttaataatcgtgcacaaagcttaaacgactaatatt 40122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 51624783 - 51624835
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  51624783 ccttatttattgaatttcatccaacttaactactccactaactacaaataata 51624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 18741597 - 18741546
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    |||||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  18741597 cttatttattgaatttcatccaacttaactactccattaactacaattaata 18741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 461955 - 462117
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||  ||||||| || ||| ||| ||||||| |||| ||||||||||| |   | |||||||||| ||| |  |||| | ||||||||||| |||    
T  461955 ccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaatcaataca 462054  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 176  Q
    |||||| ||||| |||| |||  || ||||| ||||||  |||||||||| |||| |||||||    
T  462055 attaatcattttcttaaaaattatgcacaaatcttaaattactattatttcgagacggaggga 462117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 8175644 - 8175550
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||| ||||||||| | ||||| | ||||||||||||||||||| | ||||| |||| |||| || |||| || |||||||||||||||| ||||    
T  8175644 tttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaagccataaacaactattattttgaga 8175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 30682318 - 30682176
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||| ||| ||| |||||| ||||||||||| ||||| |   | | |||||||||||| | ||||| | | | |||| ||||||||    
T  30682318 ttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaattaacacaat 30682219  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactat 158  Q
    |||| ||||| |||| | ||||| | ||||||||||| |||||    
T  30682218 taatcatttttttaatagtcgtgcaaaaaccttaaacgactat 30682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 50264204 - 50264102
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| |||  || | |||||||||||||||||| | | | |||||||||||||  | |||||   |||||||||||||||    
T  50264204 ccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaatcaacaca 50264105  T
Q  115 att 117  Q
    |||    
T  50264104 att 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 46396969 - 46396869
Alignment:
Q  53 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||||||||||||| | |   ||||||||||| || | ||||| | ||||||||||||||||||||| ||||  ||||  |||||| ||||||||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  152 c 152  Q
    |    
T  46396869 c 46396869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 4972595 - 4972722
Alignment:
Q  53 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||||||||||||| | |   |||||||||||  ||  ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||| ||||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  152 caactattatttagagatggagggagta 179  Q
    | |||| ||||  |||| ||| ||||||    
T  4972695 cgactaatattgtgagacggatggagta 4972722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 3689571 - 3689709
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 125  Q
    ||||||||| || ||| | |||| |||||||| |||||||| | |   |||||||||||||||| ||||| | ||  ||||||| ||||||||| ||||     
T  3689571 aatttcatctaacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttc 3689670  T
Q  126 gttaagaatcgtgtacaaaccttaaacaactattattta 164  Q
     |||| || |||  | ||||||||||| |||||||||||    
T  3689671 tttaataaccgtacataaaccttaaacgactattattta 3689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 47359073 - 47358967
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| |||  ||||||||| |||||||||||||   | | ||||| |||| || || |||||   |||||||||||||||    
T  47359073 ccttatttattgaatttcattcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcattgaaatcaacaca 47358974  T
Q  115 attaata 121  Q
    || ||||    
T  47358973 atcaata 47358967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 31370422 - 31370373
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaat 66  Q
    ||||||| ||| |||||||||| ||| ||||||||||||||| |||||||    
T  31370422 ttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 32470012 - 32469907
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||| ||||||||||| ||||| | ||| ||||||||||||||||| ||||| || | |||  || | ||| ||||||||| |||||||| |||||  ||    
T  32470012 tttaataaatgatactaattttaccattaaaatcaacacaattaatcattttctttaaaattatgcataaatcttaaacaaatattattttgagataaag 32469913  T
Q  174 ggagta 179  Q
    ||||||    
T  32469912 ggagta 32469907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 52869107 - 52869212
Alignment:
Q  53 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 151  Q
    |||||||||||||||   | | |||| |||| |||| | || || |||||||||||||||||||||| |||||  |||| ||| ||| ||||||||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  152 caacta 157  Q
    | ||||    
T  52869207 cgacta 52869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 19265805 - 19265857
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||| ||| |||||||||| ||| ||| ||||||||||||||| ||||||||    
T  19265805 ccttaattattgaatttcattcaacttaactactccactaactataattaata 19265857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 25141949 - 25141889
Alignment:
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    ||||||||||| ||||| ||||| |||| |||||| || ||||||||||| ||||||||||    
T  25141949 aaatcaacacatttaatcattttcttaaaaatcgtatataaaccttaaacgactattattt 25141889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 1701 - 1867
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||| | |   || ||||||||||||| ||||| | ||  ||||||||| |    
T  1701 ccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacata 1800  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||| |||| || |||||| ||| ||||||| |||||||||||||||||||||||||||    
T  1801 attaatcattttcttaataaccgtgtataaatcttaaacgactattatttagagatggagggagtat 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 11656063 - 11655898
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  11656063 ccttatttattgaatttcatccaactttactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 11655964  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| || |||| | ||||||||||| ||| ||||||||||| ||||||||||    
T  11655963 attaatcattttcttaataaccgtgcataaaccttaaacgactcttatttagagacggagggagta 11655898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 13087528 - 13087694
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| |||  |||| ||||||||| |||||||| |     |||||||||||||| | ||||| | ||||||||||||||||    
T  13087528 cttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaa 13087627  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||| | ||| |||| |||||| ||  |||||||||| ||| ||||||||||| ||||||||||||    
T  13087628 ttaatcactttcttaataatcgtttatgaaccttaaacgacttttatttagagacggagggagtatt 13087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 29363304 - 29363470
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| |||||||||||||| ||| ||| ||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  ||||||||||||    
T  29363304 cttatttattgaatttcatccaacttaactaatccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaa 29363403  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||| ||||| |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  29363404 ttaatcattttcttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 29363470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 181553 - 181700
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||  |  ||||||||||  |||| ||||| ||||||||||||| ||    
T  181553 ccttatttattgaatttcatccaacttaactactccactaactataattaataatgatgt-tttagtaaatactactaattttactattgaaatcaatac 181651  T
Q  114 aattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||| |||| |||||||  ||||||||| || |||| ||||    
T  181652 aattaatatttttttaataatcgtgctcaaaccttagacgactaatatt 181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 23142659 - 23142829
Alignment:
Q  10 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 109  Q
    ||||||||| |||| ||||||||||| |  ||| ||||||||||| |||||||||||| | |   |||||||||||  |||  |||| | ||||||||||    
T  23142659 ttataccttctttattgaatttcatctagcttaactactccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatca 23142758  T
Q  110 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||| ||||| |||| ||||||| | |||||||||| ||||| ||||  |||| ||||||||||    
T  23142759 acacaattaatcattttcttaataatcgtggataaaccttaaataactaatattgtgagacggagggagta 23142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 6801928 - 6802093
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    |||||||||  ||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  6801928 ccttatttatcgaacttcatccaacttaactactccactaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacata 6802027  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| || | || |  || ||||||| ||||||||||||||||||||||||||    
T  6802028 attaatcattttcttaataaccatgcatcaatcttaaacgactattatttagagatggagggagta 6802093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 15058114 - 15058279
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| |||  |||| |||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||| |||  |    
T  15058114 ccttatttattgaatttcatccaacttaaatacttcactaactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaactta 15058213  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  ||||  |||||||||    
T  15058214 attaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgcgagacagagggagta 15058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 1956101 - 1955942
Alignment:
Q  10 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 109  Q
    |||||||||||||| ||||||| ||| ||   ||||||| |||||||||||||||||| | | |  ||||||||||||||| ||||| | ||||||||||    
T  1956101 ttataccttatttattgaattttatcgaacacagctacttcactaactacaattaataagagtatattagtaaatgatactaattttaccattgaaatca 1956002  T
Q  110 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    | |||||||||  |||| ||||  |  ||||| ||||||||||| |||||||||| ||||    
T  1956001 atacaattaatctttttcttaattactgtgtataaaccttaaacgactattattttgaga 1955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 3291898 - 3291731
Alignment:
Q  3 tccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctat 101  Q
    |||| |||||||| |||||||| ||||||| |||||| ||| ||||| ||||||||||||||||||   | | |||||||||| ||||| || || | ||    
T  3291898 tccattgttatacacttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccat 3291799  T
Q  102 tgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    | ||||| | ||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||    
T  3291798 taaaatcgatacaattaatcatttccttaataatcgtgcaaaaaccttaaacgactattatttagaga 3291731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 21010172 - 21010340
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaa----ctacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 112  Q
    ||||||| |||||||||||||| ||| ||||||||||||    |||||||| ||| | |   |||||||||||||||| ||||| | ||  |||| ||||    
T  21010172 ttatttattgaatttcatccaacttaactactccactaattaactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaaca 21010271  T
Q  113 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||||| ||||| |||| ||| ||| | ||||||||||||||||||||||||| | ||||| |||||    
T  21010272 caattaatcattttcttaataattgtgcataaaccttaaacaactattatttagaaacggaggaagtat 21010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 1781789 - 1781937
Alignment:
Q  4 ccactgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattg 103  Q
    ||||| ||||||||| |||| |||||||||| ||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||    
T  1781789 ccactattataccttttttattgaatttcattcaacttaac-actccactaactacaattaataagggtgttttagtaaatgctactaattttaccattg 1781887  T
Q  104 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    | ||||||| ||||||| ||||| |||| ||||||| | |||||||||||    
T  1781888 agatcaacataattaatcattttcttaacaatcgtgcataaaccttaaac 1781937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 6834484 - 6834319
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| ||||| |||| ||||||| ||| || |||||||| ||||||||   |   |||||||||||||| | ||||  ||||  |||||||||||||    
T  6834484 ttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaat 6834385  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||||||||||    
T  6834384 taattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggagggagtatt 6834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 3720370 - 3720210
Alignment:
Q  4 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 102  Q
    ||||| |||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||| | |   ||| ||||||  |||  |||||   |||    
T  3720370 ccactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataatt 3720271  T
Q  103 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  3720270 gaaatcaacacaattaatcatttcattaataatcgtgcacaaaccttaaacgactaatatt 3720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 31894327 - 31894161
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 113  Q
    ||||||||| | |||||||||||| ||| ||||| |||||||||||||||||| ||  |  ||||||||||| |||| ||||| | ||||||||||||||    
T  31894327 ccttatttattaaatttcatccaacttaactacttcactaactacaattaataatgacgt-tttagtaaatgctactaattttaccattgaaatcaacac 31894229  T
Q  114 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||||| ||||| |||| |||| |  ||||| ||||||| | || ||||  |||| |||||||||||    
T  31894228 aattaatcattttcttaataatcatacacaaatcttaaacgattaatattgtgagacggagggagtat 31894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 24983566 - 24983444
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | |||||||||||| ||    
T  24983566 ccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattgaaatcaactca 24983467  T
Q  115 attaat-attttgttaagaatcg 136  Q
    | |||| ||||  ||||||||||    
T  24983466 actaatcatttccttaagaatcg 24983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 180
Target Start/End: Complemental strand, 32440749 - 32440596
Alignment:
Q  28 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttg 126  Q
    ||||||||||| ||| |||||| ||||| ||||||||||| | |   |||||||||| ||||| ||||| | ||  ||||||||||||||||| ||||      
T  32440749 atttcatccaacttaactactctactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcc 32440650  T
Q  127 ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    | || || |||| | ||| ||||||| ||||||||||||||| |||||||||||    
T  32440649 taaataaccgtgcataaatcttaaacgactattatttagagacggagggagtat 32440596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 13909422 - 13909558
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||||||| | ||||||||| || |||  ||||||||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||||||||||     
T  13909422 cttatttattcaatttcatctaacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacat 13909521  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||| ||||  |||| ||||||| |||||| |||||    
T  13909522 ttaatcatttccttaataatcgtgcacaaactttaaa 13909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 15582280 - 15582446
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||  || ||| | ||| ||||||||||||  | ||  || | |||| ||||||||||| ||||| | |||||||||||||||    
T  15582280 ccttatttattgaatttcattaaacttaaccacttcactaactacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacaca 15582379  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| |||   ||||  || || |||||| ||||||| ||||||||||  ||||||||| |||||    
T  15582380 attaatcattcatttaaatattgtctacaaatcttaaacgactattattttaagatggaggaagtat 15582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 34657677 - 34657627
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  34657677 ttatttattgaatttcatccaacttaactactccactaactacaattaata 34657627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 1063708 - 1063615
Alignment:
Q  27 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 120  Q
    ||||||||  || ||| ||||||||||||||||||||| |  | | | |||||||||| ||||| |||||   |||||||||||||||||||||    
T  1063708 aatttcatttaacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaat 1063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 11143704 - 11143623
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 96  Q
    ||||||||| |||| ||||||||| ||| ||||| ||||||||| |||||||| | |   |||||||||||||||| |||||    
T  11143704 ccttatttattgaacttcatccaacttaactacttcactaactataattaataagggtgatttagtaaatgatactaatttt 11143623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 30716898 - 30716978
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 96  Q
    |||||||| ||||||| |||||| ||  |||||||||||||||||||||||| | |   || ||||||||||||| |||||    
T  30716898 cttatttattgaattttatccaactttactactccactaactacaattaataagggtgtttaagtaaatgatactaatttt 30716978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 15046121 - 15046171
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 66  Q
    ||||||||| |||||||||||||| | | |||||||||||||||||||||||    
T  15046121 ccttatttattgaatttcatccaactaa-ctactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 1225045 - 1225149
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | ||||| |||||| ||| || || ||||||||| |||||||| |   | |||||||||| ||| | ||||| ||||| |||||||||||    
T  1225045 ccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaatcaacaca 1225143  T
Q  115 attaat 120  Q
    ||||||    
T  1225144 attaat 1225149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 4590655 - 4590610
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 120  Q
    ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  4590655 tttagtaaacgatattaattttactattgaaatcaacacaattaat 4590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 5302351 - 5302400
Alignment:
Q  18 tatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||    
T  5302351 tatttattgaacttcatccaacttaactactccattaactacaattaata 5302400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 13206949 - 13206897
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||||| ||  ||||||| | ||||||||||||||||||||||    
T  13206949 ccttatttattgaattacactcaatttaacaactccactaactacaattaata 13206897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 5389 - 5552
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||||||| | ||||| | |||||| |||||||| |    
T  5389 ttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagt 5488  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||| |||| |||| |||||||||||||||| | ||| ||||||||||| | ||||||    
T  5489 taatcattttcttaataatcatgtacaaaccttaaacgattataatttagagatgaatggagta 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 39691487 - 39691641
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||| ||| ||  |||||||||||||| ||||||||| | | | |||||||||||||| | |||||   |||||||||||||||    
T  39691487 ccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacaca 39691586  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    |||||| ||||| |||| ||||||| ||||||||||||| | ||| |||||||||    
T  39691587 attaatcattttcttaataatcgtgcacaaaccttaaacgattataatttagaga 39691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 45235578 - 45235738
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| ||| | || ||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  45235578 ccttatttattgaatttcatcaaacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 45235677  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 174  Q
    || ||| ||||  |||| ||||||| ||||||||||||| ||||||||||||||| |||||    
T  45235678 atcaatcatttccttaataatcgtgcacaaaccttaaacgactattatttagagacggagg 45235738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 16463688 - 16463855
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | ||||||||| || ||  |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  16463688 ttatttattaaatttcatcaaactttactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 16463787  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 183  Q
    |||| ||||  |||| || |||| | ||||||||||| ||||||||||||||| || |||||||||||    
T  16463788 taatcatttccttaataaccgtgcataaaccttaaacgactattatttagagacggggggagtattat 16463855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 37322425 - 37322580
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||    
T  37322425 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacaca 37322524  T
Q  115 attaat-atttt-gttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    || ||| |||||  |||| ||||||| | ||||||||||| ||||| |||||||||    
T  37322525 atcaatcattttccttaataatcgtgcataaaccttaaacgactataatttagaga 37322580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 16805873 - 16806023
Alignment:
Q  10 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 109  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16805873 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16805972  T
Q  110 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 159  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16805973 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16806023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 16845154 - 16845304
Alignment:
Q  10 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 109  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16845154 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16845253  T
Q  110 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 159  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16845254 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 25637478 - 25637642
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||||||| ||| |||||||  |||||||||||||||   |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  25637478 ccttatttattaaatttcatccaacttaactactcctataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 25637577  T
Q  115 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||  |||  | | ||||||| | ||||||||||||||||||||||||||| ||| ||||||    
T  25637578 attaatcatttccttataatcgtgcataaaccttaaacaactattatttagagacggatggagta 25637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 5789778 - 5789627
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  5789778 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 5789679  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  5789678 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 5789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 17695313 - 17695492
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||| |||||||| |||||||| |   | ||| ||||||||||   ||||| | |    
T  17695313 ttccactattatacccttatttattgaatttcatccaacttaactactctactaactataattaataagaatatttttgtaaatgatatcaattttacca 17695412  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||||||| ||||||||| ||||  |||| ||||||| ||||||||||||| | ||| |||| |||| ||| ||||||    
T  17695413 ttgaaatcaatacaattaatcatttccttaataatcgtgcacaaaccttaaacgattataattttgagacggatggagta 17695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 39785582 - 39785751
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata---ctcattttgctattgaaatcaac 111  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   ||||||||||||||   || ||||| | ||  ||||||||    
T  39785582 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaac 39785681  T
Q  112 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| ||||||||||||||| |||||||||||    
T  39785682 acaattaatcatttccttaataaccgtgcatcaaccttaaacgactattatttagagacggagggagtat 39785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 36794281 - 36794450
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  36794281 ccttatttattgaacttcatccaacttaactactccactaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacaca 36794380  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 183  Q
    |||||| ||||  |||| || | || |  || ||||||| ||||||||||||||| |||| |||||||||    
T  36794381 attaatcatttccttaataaccatgcatcaatcttaaacgactattatttagagacggagagagtattat 36794450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 14523488 - 14523320
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||| | ||||||||||| || ||| |||||||||||||||||||||||| |   | |||||||||||||| | ||||| | |||||||||||||||    
T  14523488 ccttattaattgaatttcatctaacttaactactccactaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacaca 14523389  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 182  Q
    |  ||| ||||  |||| || | || | |||| |||||| |||||| |||||||| ||||||| |||||    
T  14523388 aaaaatcatttccttaataaccttgcataaactttaaacgactattttttagagacggagggattatta 14523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 15359203 - 15359036
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | |||||   ||  |||||||||||    
T  15359203 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacaca 15359104  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||| || || |||| || |||| |  |||||||||| ||||||||||| ||| ||| | ||||||    
T  15359103 attaatcatcttcttaataaccgtgcatcaaccttaaacgactattatttaaagacggaagaagtatt 15359036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 35313870 - 35313989
Alignment:
Q  2 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| |||||| |||||||| ||||||||||| || ||| |||||||||||||||||||||||| |    ||||| |||||  |||| ||||| | |    
T  35313870 ttccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataaggttgctttaataaatactactaattttacca 35313969  T
Q  101 ttgaaatcaacacaattaat 120  Q
    ||||||||||||||||||||    
T  35313970 ttgaaatcaacacaattaat 35313989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 26607999 - 26607917
Alignment:
Q  100 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| | ||| ||||||||| ||||||||||||    
T  26607999 attgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaactattataatttagagaaggagggagtatt 26607917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 43410427 - 43410577
Alignment:
Q  19 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 118  Q
    ||||| |||||||||| ||| ||| |||||||| ||||||||||||||| |   | |||||||||||||| | |||||   ||||| |||||||||||||    
T  43410427 atttattgaatttcattcaacttaactactccattaactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaatta 43410526  T
Q  119 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 168  Q
    || ||||  |||| ||||||| |||||| |||||  ||||| |||||||||    
T  43410527 ataatttccttaataatcgtgcacaaacattaaaggactataatttagaga 43410577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 36354557 - 36354393
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   || | ||||| ||||| ||||| | ||  ||||||||||||     
T  36354557 ttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaac 36354458  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    || | ||||  |||| ||||||  | ||||||||||  ||||||||||||||| ||| |||||||    
T  36354457 tagtcatttccttaataatcgtacataaaccttaaatgactattatttagagacggatggagtat 36354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 43115908 - 43115773
Alignment:
Q  25 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 123  Q
    |||||||||| ||| ||| ||||||||||||||||||| |||| | | | ||||||||||| |||| | |||   ||||||||||||||||||||| |||    
T  43115908 tgaatttcattcaacttaactactccactaactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatt 43115809  T
Q  124 ttgttaagaatcgtgtacaaaccttaaacaactatt 159  Q
    |  |||| ||||| | |||||| |||||| ||||||    
T  43115808 tctttaataatcgcgcacaaactttaaacgactatt 43115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 8947168 - 8947063
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |     ||||||||||  |||| |||||   |||||||||||||||    
T  8947168 ccttatttattgaatttcatccaacttaactactccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacaca 8947069  T
Q  115 attaat 120  Q
    ||||||    
T  8947068 attaat 8947063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 19937734 - 19937823
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||    
T  19937734 tttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 19937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 17346476 - 17346356
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||     | |||| ||||||||| | ||||| || |||||||||| | |||    
T  17346476 ttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataat 17346377  T
Q  117 taatattttgttaagaatcgt 137  Q
    ||||||||  |||| ||||||    
T  17346376 taatatttctttaataatcgt 17346356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 31448809 - 31448665
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||| ||| ||| | |||||||| |||||| || | |   ||||||||||||  || ||||| | ||  |||||||||||    
T  31448809 ccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacaca 31448710  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactat 158  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||||    
T  31448709 attaatcatttccttaataatcgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 34120552 - 34120395
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||  |  | |||||||||| |||||  |||| | ||  ||||||||||||    
T  34120552 cttacttattgaatttcatccaacttaactattccactaactacaattaataaat--attttagtaaataatactagttttaccatcaaaatcaacacaa 34120455  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 174  Q
    ||||| ||||| |||| |||| || | |||| ||||||   ||||||||||||| |||||    
T  34120454 ttaatcattttcttaataatcatgcataaactttaaacggttattatttagagacggagg 34120395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 5272255 - 5272204
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 66  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  5272255 ccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 16377774 - 16377634
Alignment:
Q  17 ttatttactgaatttcatccaatttag----ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 112  Q
    ||||||| |||||||||||||| |||     |||||||||||||||||||||||| |   | ||| |||||||||| | ||||| | |||| ||||||||    
T  16377774 ttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaaca 16377675  T
Q  113 caattaat-attttgttaagaatcgtgtacaaaccttaaac 152  Q
    |||||||| ||||  |||| ||||||| ||||| |||||||    
T  16377674 caattaatcatttctttaataatcgtgcacaaatcttaaac 16377634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 35242411 - 35242309
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| |||||||||||||| ||| |||||| |||||||||||||||||  |  | | ||||||||||| || |||||   ||| |||||||||||||    
T  35242411 ttatttattgaatttcatccaacttaactactcaactaactacaattaataaatatattctagtaaatgattctaattttaacattaaaatcaacacaat 35242312  T
Q  117 taa 119  Q
    |||    
T  35242311 taa 35242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 3323387 - 3323254
Alignment:
Q  16 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 115  Q
    |||| ||| |||||||||||||| ||| ||||||||||||||||||||||||              |||| |||| ||||| | ||||||||||||||||    
T  3323387 cttacttattgaatttcatccaacttaactactccactaactacaattaata--------------aatgttactaattttaccattgaaatcaacacaa 3323302  T
Q  116 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 162  Q
    ||||| |||||  ||| ||||||| ||||||||||||| |||| ||||    
T  3323301 ttaatcatttttataataatcgtgcacaaaccttaaacgactaatatt 3323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 43699712 - 43699610
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    |||| |||| ||||||| |||||| |||  |||||||||||    |||||||| ||| | |||| ||||||||||| ||||| |||||||||||||||||    
T  43699712 ccttgtttattgaattttatccaacttaattactccactaaa---aattaataggtgtattttaataaatgatactaattttactattgaaatcaacaca 43699616  T
Q  115 attaat 120  Q
     |||||    
T  43699615 gttaat 43699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 26863472 - 26863422
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| |||||||||||| | ||| ||||||||||||||||||||||||    
T  26863472 ttatttaatgaatttcatccgacttaactactccactaactacaattaata 26863422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 39329777 - 39329728
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  39329777 ttatttattgaatttcatccaatttaactactcca-taactacaattaata 39329728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 9458382 - 9458330
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  9458382 ccttatttattaaatttcatccaactttactactccactaactacaattaata 9458330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 18853317 - 18853167
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatt--ttgctattgaaatcaaca 112  Q
    ||||||||| |||||||||||||| |||  ||||| ||||||||||| ||||| | | | ||| |||||||||||  |||  ||   |||||||||||||    
T  18853317 ccttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaaca 18853219  T
Q  113 caattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattattt 163  Q
    ||||||| |||||  ||||  |||||| |||||  |||||| ||||||||||    
T  18853218 caattaattatttccttaaagatcgtgcacaaattttaaacgactattattt 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 5272181 - 5272142
Alignment:
Q  142 aaaccttaaacaactattatttagagatggagggagtatt 181  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  5272181 aaaccttaaacgactattatttagagatgaagggagtatt 5272142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 30544402 - 30544445
Alignment:
Q  136 gtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  30544402 gtgtaaaaaccttaaacgactattatttagagacggagggagta 30544445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 32783421 - 32783527
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||||||||||||| | ||||| ||||  |||| |||||||||||| ||||| |||| || |||| |  |||||||||  | |||||||||||||||| |    
T  32783421 tttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataaccgtgcatcaaccttaaatgattattatttagagatgg-g 32783519  T
Q  174 ggagtatt 181  Q
    ||||||||    
T  32783520 ggagtatt 32783527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 34225587 - 34225726
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||| ||| |||  ||||||| ||||||||||||||| | |   |||||||||| ||||| | ||| | ||| ||||||| | |    
T  34225587 ccttatttattaaatttcattcaacttaaatactccattaactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatata 34225686  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaaca 153  Q
    |||| | ||||  |||| ||||||| ||||||||||||||    
T  34225687 attattcatttccttaataatcgtgcacaaaccttaaaca 34225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 19937384 - 19937434
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| ||||||| || ||| ||| ||||||||||||||||||||||||    
T  19937384 ttatttattgaattttattcaacttaactactccactaactacaattaata 19937434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 32831289 - 32831239
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||| |||||||||||  ||||| |||||||| |||||||||||||||    
T  32831289 ttatttattgaatttcatctcatttaactactccaataactacaattaata 32831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 39443793 - 39443875
Alignment:
Q  98 ctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||||||| ||||||| ||||| |||| ||| ||| ||||||||||||| |||| ||||   ||||||| ||||||    
T  39443793 ctattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatattataagatggatggagta 39443875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 7494954 - 7494909
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactaca 60  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||    
T  7494954 ccttatttattgaatttcatccaacttaactactccgctaactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 11742644 - 11742592
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    ||||||||| |||| |||||| || ||| |||||||| |||||||||||||||    
T  11742644 ccttatttattgaacttcatcaaacttaactactccattaactacaattaata 11742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 20467 - 20306
Alignment:
Q  19 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 118  Q
    ||||| |||||||||||||| ||| ||||| |||||||| ||||||||| | | | |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  20467 atttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaatcaacacaatta 20368  T
Q  119 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    || ||||  |||| |||| || |||| |||||||  ||||||||||||||||||||||||||    
T  20367 atcatttaattaataatcttgcacaacccttaaagtactattatttagagatggagggagta 20306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 34151 - 34000
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  34151 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 34052  T
Q  101 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 151  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  34051 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 34000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 2022 - 2187
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| ||||||||||| ||| ||  || |||||||||||||||||||| |     |||||||||||||| | |||||   |||||||| ||||||    
T  2022 ccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacaca 2121  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||||| | ||  |||| ||||||| |  |||||||||| ||| ||||||||||| ||||||||||    
T  2122 attaatcacttccttaataatcgtgcatgaaccttaaacgacttttatttagagacggagggagta 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 816 - 697
Alignment:
Q  2 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 100  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||   ||||||||||||||||| ||||   |   ||||||||||| || | ||||| | |    
T  816 ttccactattatacccttatttattgaatttcatccaatttaaacactccactaactacaatcaataaaggtgttttagtaaatgctattaattttacca 717  T
Q  101 ttgaaatcaacacaattaat 120  Q
    ||||||||||||||||||||    
T  716 ttgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 1875 - 1768
Alignment:
Q  75 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 173  Q
    |||||||||||||| | ||||  ||||  ||||||||||||||||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||    
T  1875 tttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggag 1776  T
Q  174 ggagtatt 181  Q
    ||||||||    
T  1775 ggagtatt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 16095 - 16261
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||||||||||||  ||| || || || ||||||||||||||| |||   ||||||||||| || | |||||   ||| |||||||||||    
T  16095 ccttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacaca 16194  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 180  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||| ||||    
T  16195 attaatcatttccttaataatcgtgaacaaatcttaaactactaatattgtgagacggagggggtat 16261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 50201 - 50368
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  50201 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 50300  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 181  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  50301 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 50368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 8099 - 7938
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    ||||||||| |||| ||||||||| |||  ||||||||||||||||||||||| | |   ||| |||||| ||| | ||||| | ||  ||||||||| |    
T  8099 ccttatttattgaacttcatccaacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaa 8000  T
Q  115 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 175  Q
    |||||| ||||  |||| || |||| |  |||| ||||| ||||||||||||||| ||||||    
T  7999 attaatcatttccttaataaccgtgcatcaaccgtaaacgactattatttagagacggaggg 7938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 17097 - 17197
Alignment:
Q  80 taaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 178  Q
    |||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| |||| || ||||||||||||| |||| ||||   ||||||| |||||    
T  17097 taaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaatattgttagatggatggagt 17196  T
Q  179 a 179  Q
    |    
T  17197 a 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 136153 - 135990
Alignment:
Q  17 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 116  Q
    ||||||| | ||||||||| || ||| ||||| ||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||||||||  ||    
T  136153 ttatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattat 136054  T
Q  117 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    |||| ||||  |||| ||||||| | ||| ||||||| |||| ||||  |||| ||||||||||    
T  136053 taatcatttatttaataatcgtgcataaatcttaaacgactaatattgtgagacggagggagta 135990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 105681 - 105786
Alignment:
Q  15 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 114  Q
    |||||||||  ||||||||| ||| ||| ||||| |||||||||||||||||| | |   ||||||||| | || | ||||| | |||||||| ||||||    
T  105681 ccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacaca 105780  T
Q  115 attaat 120  Q
    ||||||    
T  105781 attaat 105786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 14297 - 14234
Alignment:
Q  5 cactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaata 67  Q
    |||| ||||||||| ||||| ||||||||||| |||||| |||||||| |||||| ||||||||    
T  14297 cactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaata 14234  T

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Target: scaffold0470 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 1067 - 1147
Alignment:
Q  100 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 179  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  1067 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 1147  T

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