View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18190_low_9 (Length: 266)
Name: NF18190_low_9
Description: NF18190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18190_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 29019088 - 29018848
Alignment:
| Q |
18 |
ggaacaatagcgagtaatgtagatcatcatagacacaccaagtgcttatctatcattatttcaataaaataacacttagaagcaaaacatatcttaccaa |
117 |
Q |
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| T |
29019088 |
ggaacaatagcgagtaatgtagatcatcatagacacaccaagtgcttatctatcattatttcaataaaataacacttagaagcaaaacatatcttaccaa |
29018989 |
T |
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| Q |
118 |
cgatagatcttattcttccttgtttacatgttctactttttggtcgggtttgtaaattgtaatgcacataactttgctaccaataataacacattgaatt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
29018988 |
cgatagatcttattcttccttgtttacatgttctacttttttgtcgggtttgtaaattgtaatgcacataattttgctaccaataataacacattgaatt |
29018889 |
T |
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| Q |
218 |
gttccattccacgcacgatgggtcaattacatatctctgct |
258 |
Q |
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| T |
29018888 |
gttccattccacgcacgatgggtcaattacatatctctgct |
29018848 |
T |
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