View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18191_high_4 (Length: 418)

Name: NF18191_high_4
Description: NF18191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18191_high_4
NF18191_high_4
[»] chr7 (41 HSPs)
chr7 (8-403)||(28520826-28521222)
chr7 (105-234)||(12234801-12234930)
chr7 (171-234)||(33645939-33646002)
chr7 (160-231)||(48157087-48157158)
chr7 (176-216)||(29290380-29290420)
chr7 (177-233)||(39551532-39551588)
chr7 (160-239)||(4966180-4966259)
chr7 (169-216)||(45078325-45078372)
chr7 (145-219)||(12834914-12834988)
chr7 (181-219)||(39539769-39539807)
chr7 (114-216)||(44615025-44615127)
chr7 (171-224)||(36537947-36538000)
chr7 (174-214)||(941589-941629)
chr7 (171-219)||(19719050-19719098)
chr7 (171-219)||(36598334-36598382)
chr7 (176-216)||(44686977-44687017)
chr7 (171-243)||(46082056-46082128)
chr7 (172-219)||(11048071-11048118)
chr7 (147-234)||(20553132-20553219)
chr7 (112-219)||(23214899-23215006)
chr7 (171-218)||(23434137-23434184)
chr7 (177-248)||(39334208-39334279)
chr7 (177-248)||(39360038-39360109)
chr7 (174-216)||(1645681-1645723)
chr7 (171-229)||(3500945-3501003)
chr7 (176-214)||(5006494-5006532)
chr7 (172-214)||(15740390-15740432)
chr7 (160-234)||(22387863-22387937)
chr7 (176-234)||(27626106-27626164)
chr7 (160-206)||(29574592-29574638)
chr7 (177-243)||(39568308-39568374)
chr7 (171-209)||(47427281-47427319)
chr7 (129-234)||(752998-753103)
chr7 (178-219)||(9872916-9872957)
chr7 (160-217)||(30535609-30535666)
chr7 (179-248)||(39345486-39345555)
chr7 (170-230)||(27496385-27496444)
chr7 (170-230)||(27503043-27503102)
chr7 (170-230)||(27517834-27517893)
chr7 (176-212)||(30134100-30134136)
chr7 (176-232)||(44808189-44808245)
[»] chr1 (37 HSPs)
chr1 (158-233)||(4549260-4549335)
chr1 (179-218)||(15581299-15581338)
chr1 (176-218)||(17628644-17628686)
chr1 (111-233)||(33723300-33723422)
chr1 (147-247)||(44031953-44032053)
chr1 (112-219)||(601085-601191)
chr1 (159-230)||(15579515-15579586)
chr1 (147-234)||(31517694-31517781)
chr1 (181-220)||(35350683-35350722)
chr1 (171-233)||(28689430-28689492)
chr1 (114-234)||(4549462-4549583)
chr1 (125-214)||(15709898-15709987)
chr1 (181-234)||(26184777-26184830)
chr1 (167-247)||(11639390-11639470)
chr1 (177-233)||(19412581-19412637)
chr1 (107-243)||(37593598-37593734)
chr1 (175-234)||(4699597-4699656)
chr1 (160-231)||(28389060-28389131)
chr1 (160-219)||(38170657-38170716)
chr1 (170-233)||(43029379-43029442)
chr1 (129-216)||(44928127-44928214)
chr1 (176-219)||(45327624-45327667)
chr1 (171-209)||(17631080-17631118)
chr1 (176-230)||(30418165-30418218)
chr1 (170-231)||(36514652-36514714)
chr1 (182-219)||(3223711-3223748)
chr1 (181-234)||(27140507-27140560)
chr1 (147-216)||(32515395-32515464)
chr1 (173-230)||(35925723-35925780)
chr1 (160-209)||(37175891-37175940)
chr1 (183-219)||(3070080-3070116)
chr1 (171-219)||(4481974-4482022)
chr1 (179-219)||(6231802-6231842)
chr1 (160-204)||(24279808-24279852)
chr1 (171-219)||(29635391-29635439)
chr1 (172-216)||(29723536-29723580)
chr1 (167-234)||(43338145-43338212)
[»] chr3 (38 HSPs)
chr3 (111-217)||(45541617-45541723)
chr3 (160-231)||(37273166-37273237)
chr3 (176-234)||(31010431-31010489)
chr3 (178-219)||(30923883-30923924)
chr3 (174-219)||(41724256-41724301)
chr3 (177-234)||(43115085-43115142)
chr3 (171-234)||(20192584-20192647)
chr3 (160-219)||(49772635-49772694)
chr3 (160-234)||(21574519-21574593)
chr3 (176-234)||(52412887-52412945)
chr3 (171-216)||(41452570-41452615)
chr3 (176-233)||(50004682-50004739)
chr3 (110-218)||(11253546-11253654)
chr3 (171-247)||(14548699-14548775)
chr3 (172-219)||(26808174-26808221)
chr3 (183-234)||(36200125-36200176)
chr3 (102-140)||(2100088-2100126)
chr3 (177-219)||(9279310-9279352)
chr3 (183-217)||(30750046-30750080)
chr3 (170-216)||(36646359-36646405)
chr3 (167-233)||(42745068-42745134)
chr3 (176-230)||(48048965-48049019)
chr3 (176-233)||(11039322-11039379)
chr3 (147-216)||(24603706-24603775)
chr3 (158-219)||(24624254-24624315)
chr3 (160-197)||(35197367-35197404)
chr3 (176-217)||(42537086-42537127)
chr3 (171-231)||(2606288-2606348)
chr3 (176-216)||(3015826-3015866)
chr3 (182-234)||(3044248-3044300)
chr3 (184-216)||(13804824-13804856)
chr3 (171-219)||(21865620-21865668)
chr3 (178-234)||(23785284-23785340)
chr3 (176-228)||(27290884-27290936)
chr3 (171-219)||(30573892-30573940)
chr3 (171-207)||(31403074-31403110)
chr3 (171-219)||(42817200-42817248)
chr3 (171-219)||(47132038-47132086)
[»] chr6 (46 HSPs)
chr6 (105-234)||(281760-281889)
chr6 (160-230)||(2767716-2767785)
chr6 (170-219)||(1669775-1669824)
chr6 (171-234)||(2460129-2460192)
chr6 (181-234)||(9667973-9668026)
chr6 (185-229)||(3155209-3155253)
chr6 (182-234)||(7785733-7785785)
chr6 (167-215)||(20377894-20377942)
chr6 (171-234)||(24670449-24670512)
chr6 (176-234)||(4420672-4420730)
chr6 (176-234)||(9027607-9027665)
chr6 (160-214)||(32917246-32917300)
chr6 (105-231)||(33498651-33498777)
chr6 (160-234)||(34403884-34403958)
chr6 (147-216)||(27595521-27595590)
chr6 (169-230)||(30523692-30523753)
chr6 (178-234)||(27909623-27909679)
chr6 (171-239)||(32577964-32578032)
chr6 (171-219)||(33832251-33832299)
chr6 (171-239)||(34939537-34939605)
chr6 (167-234)||(2455839-2455906)
chr6 (170-209)||(6310227-6310266)
chr6 (187-242)||(6536968-6537023)
chr6 (172-219)||(8364955-8365002)
chr6 (174-233)||(10836844-10836903)
chr6 (171-230)||(27615251-27615310)
chr6 (172-214)||(1575944-1575986)
chr6 (177-219)||(2034430-2034472)
chr6 (176-234)||(2117432-2117490)
chr6 (112-234)||(7148695-7148817)
chr6 (180-229)||(1019597-1019646)
chr6 (170-219)||(10616518-10616567)
chr6 (171-216)||(27693417-27693462)
chr6 (190-219)||(31668681-31668710)
chr6 (180-216)||(2460930-2460966)
chr6 (180-216)||(4246457-4246493)
chr6 (147-219)||(7901785-7901856)
chr6 (170-234)||(7945861-7945925)
chr6 (181-217)||(28776621-28776657)
chr6 (181-217)||(28798325-28798361)
chr6 (172-216)||(31624137-31624181)
chr6 (171-219)||(31686341-31686389)
chr6 (176-216)||(33284290-33284330)
chr6 (170-234)||(34404118-34404182)
chr6 (170-218)||(34404702-34404750)
chr6 (170-230)||(34939777-34939837)
[»] chr5 (40 HSPs)
chr5 (160-219)||(7674692-7674751)
chr5 (176-233)||(18700415-18700471)
chr5 (167-233)||(35963271-35963337)
chr5 (177-217)||(11700362-11700402)
chr5 (171-234)||(10125696-10125759)
chr5 (170-228)||(32172688-32172746)
chr5 (171-249)||(37690614-37690692)
chr5 (167-209)||(40499700-40499742)
chr5 (160-229)||(985647-985716)
chr5 (176-213)||(11457148-11457185)
chr5 (184-233)||(12467163-12467212)
chr5 (182-231)||(18704025-18704074)
chr5 (112-209)||(38047798-38047895)
chr5 (160-219)||(2468475-2468535)
chr5 (171-247)||(37526177-37526253)
chr5 (171-247)||(37588338-37588414)
chr5 (176-219)||(10272414-10272457)
chr5 (109-232)||(11297112-11297235)
chr5 (174-233)||(15074730-15074789)
chr5 (171-230)||(17368709-17368768)
chr5 (171-234)||(37611193-37611256)
chr5 (171-234)||(37787923-37787986)
chr5 (172-215)||(38766524-38766567)
chr5 (106-141)||(42646792-42646827)
chr5 (189-247)||(3504760-3504818)
chr5 (171-233)||(5951946-5952008)
chr5 (170-215)||(7853688-7853734)
chr5 (167-233)||(18853041-18853107)
chr5 (182-216)||(25705648-25705682)
chr5 (170-216)||(34117524-34117570)
chr5 (170-239)||(17258860-17258929)
chr5 (181-234)||(17369427-17369480)
chr5 (173-214)||(37489062-37489103)
chr5 (170-230)||(499708-499768)
chr5 (171-231)||(2092392-2092452)
chr5 (170-230)||(2092522-2092582)
chr5 (170-234)||(6109512-6109576)
chr5 (189-225)||(9104173-9104209)
chr5 (171-219)||(14295550-14295598)
chr5 (170-234)||(28586743-28586807)
[»] chr4 (30 HSPs)
chr4 (170-219)||(50800007-50800056)
chr4 (172-219)||(6978941-6978988)
chr4 (105-216)||(7367966-7368077)
chr4 (171-234)||(27123330-27123393)
chr4 (177-234)||(27970087-27970144)
chr4 (162-234)||(1137741-1137813)
chr4 (172-232)||(2874603-2874663)
chr4 (162-230)||(3176073-3176141)
chr4 (160-234)||(6987708-6987782)
chr4 (162-219)||(25571304-25571361)
chr4 (105-214)||(53315375-53315484)
chr4 (173-212)||(4243617-4243656)
chr4 (160-234)||(11264330-11264404)
chr4 (170-228)||(19304961-19305019)
chr4 (176-230)||(29467607-29467661)
chr4 (177-219)||(32071912-32071954)
chr4 (171-233)||(45128288-45128350)
chr4 (171-216)||(2996620-2996665)
chr4 (174-219)||(4691892-4691937)
chr4 (105-234)||(6428047-6428176)
chr4 (176-233)||(23676727-23676783)
chr4 (170-214)||(9841114-9841158)
chr4 (190-234)||(14011263-14011307)
chr4 (174-230)||(20936210-20936266)
chr4 (170-230)||(21592983-21593043)
chr4 (170-214)||(21952997-21953041)
chr4 (170-234)||(22662224-22662288)
chr4 (174-219)||(24370932-24370979)
chr4 (180-216)||(27124131-27124167)
chr4 (171-219)||(53155304-53155352)
[»] chr8 (42 HSPs)
chr8 (147-234)||(26410308-26410396)
chr8 (183-234)||(11183574-11183625)
chr8 (160-219)||(14949910-14949969)
chr8 (170-248)||(6950337-6950415)
chr8 (115-187)||(10939451-10939523)
chr8 (171-243)||(26479805-26479877)
chr8 (161-231)||(43504783-43504853)
chr8 (170-219)||(11813082-11813131)
chr8 (177-233)||(13000408-13000464)
chr8 (178-230)||(25869251-25869303)
chr8 (171-231)||(30259146-30259206)
chr8 (170-214)||(39551186-39551230)
chr8 (176-216)||(43709309-43709349)
chr8 (144-219)||(3090190-3090264)
chr8 (160-219)||(11569424-11569483)
chr8 (147-230)||(30191095-30191178)
chr8 (171-214)||(30987969-30988012)
chr8 (170-209)||(45071428-45071467)
chr8 (172-234)||(4560531-4560593)
chr8 (176-234)||(31875578-31875636)
chr8 (336-389)||(34293326-34293380)
chr8 (107-216)||(40356972-40357084)
chr8 (189-231)||(42597470-42597512)
chr8 (177-234)||(4055600-4055657)
chr8 (171-216)||(8255439-8255484)
chr8 (170-219)||(10062118-10062167)
chr8 (173-234)||(10383914-10383975)
chr8 (160-217)||(11188122-11188179)
chr8 (189-234)||(11795121-11795166)
chr8 (174-219)||(27119910-27119955)
chr8 (9-62)||(34293163-34293215)
chr8 (170-234)||(2458543-2458607)
chr8 (170-234)||(5088881-5088945)
chr8 (170-218)||(11118974-11119022)
chr8 (172-216)||(11770990-11771034)
chr8 (171-247)||(12361208-12361284)
chr8 (171-231)||(26370997-26371057)
chr8 (160-219)||(32840952-32841012)
chr8 (160-231)||(34849135-34849207)
chr8 (177-229)||(37740411-37740462)
chr8 (176-216)||(39049319-39049359)
chr8 (170-234)||(42215283-42215347)
[»] scaffold0020 (1 HSPs)
scaffold0020 (111-234)||(159891-160014)
[»] chr2 (40 HSPs)
chr2 (160-234)||(8820259-8820333)
chr2 (176-234)||(34652019-34652077)
chr2 (108-234)||(43529773-43529899)
chr2 (170-219)||(14316122-14316171)
chr2 (110-247)||(28677576-28677713)
chr2 (171-219)||(787376-787424)
chr2 (167-234)||(1647265-1647332)
chr2 (114-209)||(28803451-28803546)
chr2 (160-247)||(40158734-40158821)
chr2 (172-219)||(44606089-44606136)
chr2 (184-234)||(1939323-1939373)
chr2 (170-224)||(17380607-17380661)
chr2 (177-234)||(32821838-32821895)
chr2 (170-242)||(38388707-38388780)
chr2 (106-198)||(9996803-9996895)
chr2 (176-216)||(11344753-11344793)
chr2 (154-218)||(37186277-37186341)
chr2 (162-234)||(41817197-41817269)
chr2 (182-234)||(43985238-43985290)
chr2 (170-233)||(1830075-1830138)
chr2 (176-215)||(9878665-9878704)
chr2 (176-231)||(10285892-10285947)
chr2 (176-219)||(30538156-30538199)
chr2 (171-230)||(41032933-41032992)
chr2 (171-234)||(43065428-43065491)
chr2 (183-233)||(14451040-14451090)
chr2 (172-230)||(27237872-27237930)
chr2 (171-217)||(45314914-45314960)
chr2 (161-214)||(4550796-4550849)
chr2 (176-209)||(6561391-6561424)
chr2 (170-219)||(15120227-15120276)
chr2 (171-216)||(16398449-16398494)
chr2 (171-216)||(32106777-32106822)
chr2 (185-234)||(33942179-33942228)
chr2 (180-233)||(41809232-41809285)
chr2 (177-233)||(1160655-1160711)
chr2 (170-230)||(1742009-1742069)
chr2 (179-219)||(10285399-10285439)
chr2 (176-216)||(12215854-12215894)
chr2 (171-234)||(33231930-33231991)
[»] scaffold0147 (1 HSPs)
scaffold0147 (171-219)||(12682-12730)
[»] scaffold0153 (2 HSPs)
scaffold0153 (177-234)||(6478-6535)
scaffold0153 (177-234)||(13498-13555)
[»] scaffold0024 (1 HSPs)
scaffold0024 (154-219)||(27620-27685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (176-219)||(306370-306413)
[»] scaffold0311 (1 HSPs)
scaffold0311 (176-230)||(10600-10654)
[»] scaffold0015 (1 HSPs)
scaffold0015 (174-216)||(68960-69002)
[»] scaffold0608 (1 HSPs)
scaffold0608 (171-219)||(9615-9663)


Alignment Details
Target: chr7 (Bit Score: 373; Significance: 0; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 8 - 403
Target Start/End: Original strand, 28520826 - 28521222
Alignment:
Q  8 tagcataggtgaaattattaccaattatatcaaatctacaaggtacaaaaacatg-tcttgtttgttctcttaatgtctactgagattaatagttaccta 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28520826 tagcataggtgaaactattaccaattatatcaaatctacaaggtacaaaaacatgctcttgtttgttctcttaatgtctactgagattaatagttaccta 28520925  T
Q  107 gggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataa 206  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28520926 gggtctgtttggattgaattacttgagcttttctacaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataa 28521025  T
Q  207 gctgttttcagctattttccataagctcgtcagaataactttacgaatacaggcttatataaaaacagttaacttatacataagcacttgtatgatatac 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521026 gctgttttcagctattttccataagctcgtcagaataactttacgaaaacaggcttatataaaaacagttaacttatacataagcacttgtatgatatac 28521125  T
Q  307 atgcatgcactaagcgcttaattaaactgaatttcttgttcaaccaaggtcaccatcagcagtgatatacaagagccatgaagaaaaagtgctagct 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521126 atgcatgcactaagcgcttaattaaactgaatttcttgttcaaccaaggtcaccatcagcagtgatatacaagagccatgaagaaaaagtgctagct 28521222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 12234801 - 12234930
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    ||||| || |||||||||| ||| |||||||||||||   | || ||| | | | ||||||||| | | | ||||| |||||||||||||||||||||||    
T  12234801 tagggcctatttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctat 12234900  T
Q  205 aagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||  |||||||||||||    
T  12234901 aagctgttttcagcttatttccataagctc 12234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 33645939 - 33646002
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||||||||||||||||||||||||||| |||||| || |  |||||||||||||    
T  33645939 gagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctc 33646002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 48157087 - 48157158
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||| || ||||| ||||| ||||||||||||| |||||| |||||||||||||||||  ||||||||||    
T  48157087 agactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataag 48157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 29290420 - 29290380
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttca 29290380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 39551532 - 39551588
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||  ||||||||||||    
T  39551532 ttatggaaacaacttatgacatgtccataaggtgttgtcagcttatttccataagct 39551588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 4966259 - 4966180
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 239  Q
    |||||| |||||||| ||||| ||||| |||||||| ||||| ||||| ||||||||| |  ||||||||||||| ||||    
T  4966259 agactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcag 4966180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 45078372 - 45078325
Alignment:
Q  169 aggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  45078372 aggagaacttatagaaataacttatgacatgtccataagctgttttca 45078325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 12834914 - 12834988
Alignment:
Q  145 gtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||| ||||| |||||| || | |||  ||||||||||| ||||||||||||| |||| ||||||||||||    
T  12834914 gtataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttcagct 12834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 39539769 - 39539807
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  39539769 ggaaacaacttatgacatgtccataagctgttttcagct 39539807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 44615025 - 44615127
Alignment:
Q  114 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttt 213  Q
    |||||||||  ||| |||||||||||||  || |||| | |||  || |||| | |||||| |||||| ||||||||||||||||||| | |||||||||    
T  44615025 tttggattgccttaattgagcttatctactagcataaccacttgcaaaactgttcaggagagcttatgaaaacaacttatgacatgtccacaagctgttt 44615124  T
Q  214 tca 216  Q
    |||    
T  44615125 tca 44615127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 36538000 - 36537947
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctatttt 224  Q
    ||||||||||||||||||||||||||||||  ||||| |||||| |||| ||||    
T  36538000 gagaacttatggaaacaacttatgacatgttcataagttgtttttagctttttt 36537947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 941629 - 941589
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  941629 aacttatggaaacaacttatgacatgtccataagcagtttt 941589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 19719098 - 19719050
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||||    
T  19719098 gagaacttatgaaaacaacttatgacatgttcataaactgttttcagct 19719050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 36598334 - 36598382
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  36598334 gagagcttatggaaacatcttatgacatgttcataagctgttttcagct 36598382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 44687017 - 44686977
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  44687017 cttatggaaacaacttatgacatgtccatgagctgttttca 44686977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 46082128 - 46082056
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 243  Q
    |||| |||||| ||||||||||||||||| | ||||| |||||||||||  ||| |||||||||  |||||||    
T  46082128 gagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaata 46082056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 11048118 - 11048071
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagctgttttcagct 11048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 20553219 - 20553132
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| ||| | |||||| | |||||| |||||||||||| |||| |||||||  ||||| ||||||||| |  |||||||||||||    
T  20553219 ataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 23215006 - 23214899
Alignment:
Q  112 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 211  Q
    |||||||||||| ||| |||| ||||||||  || |||| | ||| | |||||| ||  ||||| ||||| |||||||||||||||| || ||||||| |    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataagctct 23214907  T
Q  212 tttcagct 219  Q
     |||||||    
T  23214906 attcagct 23214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 23434137 - 23434184
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  23434137 gagagcttttggacacaacttatgacatgtctttaagctgttttcagc 23434184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 39334279 - 39334208
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 248  Q
    |||||||||||| |||||||||||| ||||| ||  |||||||  |||||||||||||| ||| ||| ||||    
T  39334279 ttatggaaacaatttatgacatgtccataagttgcattcagcttatttccataagctcgccaggatagcttt 39334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 39360109 - 39360038
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 248  Q
    |||||||||||||||||||||| || ||||| || ||||||||  |||| ||||||||| ||| ||| ||||    
T  39360109 ttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttt 39360038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 1645681 - 1645723
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||| |||||||||||||||||| |||||| ||||||||    
T  1645681 aacttatgtaaacaacttatgacatgtttataagttgttttca 1645723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 3500945 - 3501003
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 229  Q
    |||| |||||||||| ||||||||||||||  || ||||||||||||||  ||||||||    
T  3500945 gagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccata 3501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 5006494 - 5006532
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  5006494 cttatggaaacaacttataacatgtctataagttgtttt 5006532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 15740390 - 15740432
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||||||| ||||||||||||||||||  ||||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttt 15740432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 22387863 - 22387937
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| || ||||| |||||| |||||||||||| ||||| ||||| ||||||| | ||  |||||||||||||    
T  22387863 agactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctc 22387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 27626106 - 27626164
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||| ||||||||||||| |||| ||||||| | ||  |||||||||||||    
T  27626106 cttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctc 27626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 29574592 - 29574638
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataa 206  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  29574592 agactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 39568308 - 39568374
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 243  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||  ||||  |||||| |||||||||    
T  39568308 ttatggaaataacttatgacatgtccataagttgttttcggcttatttctgtaagcttgtcagaata 39568374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 47427281 - 47427319
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  47427281 gagagcttatggaaacaacttatgacatctctataagct 47427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 753103 - 752998
Alignment:
Q  129 ttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 228  Q
    |||||||||||||   | |||||| | |||||||||| ||   |||||||||| |||||  ||||||||| || |||||||||||| ||||| ||| |||    
T  753103 ttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaacagtttatgacatatcaataagctgtttttagctaattttcat 753004  T
Q  229 aagctc 234  Q
    | ||||    
T  753003 atgctc 752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 9872957 - 9872916
Alignment:
Q  178 tatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  9872957 tatggaaacaacttatgacatgtccataagttgtttccagct 9872916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 30535666 - 30535609
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag 217  Q
    |||||| || |||||||||||| ||||||||||||| ||||   ||||||||||||||    
T  30535666 agactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcag 30535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 39345555 - 39345486
Alignment:
Q  179 atggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 248  Q
    |||||||||  |||||||||||| ||||| || ||||||||  |||||||||| ||||||| ||| ||||    
T  39345555 atggaaacagtttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttt 39345486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27496385 - 27496444
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||| ||||||| || |||||||||| |||||||||||||||||  |||||||||    
T  27496385 ggagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttatttccataa 27496444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27503043 - 27503102
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||| ||||||| || |||||||||| |||||||||||||||||  |||||||||    
T  27503043 ggagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttatttccataa 27503102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27517834 - 27517893
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||| ||||| ||||||||||||||| |||||| ||||||||||  |||||||||    
T  27517834 ggagagcttaaggaaa-aacttatgacatgtccataagcagttttcagcttatttccataa 27517893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 30134136 - 30134100
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgtt 212  Q
    |||||||||||| |||||||||||||||||| |||||    
T  30134136 cttatggaaacagcttatgacatgtctataatctgtt 30134100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 44808245 - 44808189
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagc 232  Q
    |||||| ||| ||||||||||||||| |||| ||||||||||||  ||| |||||||    
T  44808245 cttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 4549335 - 4549260
Alignment:
Q  158 taagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  4549335 taagactgcttaagagaacttttggaaacaatttatgacatgtctataagttgttttcagcttatttccataagct 4549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 15581338 - 15581299
Alignment:
Q  179 atggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15581338 atggaaacaacttatgacatgtctataagctgttttcagc 15581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 17628686 - 17628644
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  17628686 cttatggaaacaacttatgacatgtccataagctgttttcagc 17628644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 233
Target Start/End: Original strand, 33723300 - 33723422
Alignment:
Q  111 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 210  Q
    ||||||||||||| ||| |||| ||||||||  |  |||| | ||| | ||||||||| ||| |||||||||||||| || |||||||||  || || ||    
T  33723300 ctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatg 33723399  T
Q  211 ttttcagctattttccataagct 233  Q
    |||||||||  ||||||||||||    
T  33723400 ttttcagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 44031953 - 44032053
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataact 246  Q
    |||||| ||| | ||||||  ||||||| |||||| || || || |||||||||| ||||||| |||||||||| ||||||||||||| |||  ||||||    
T  44031953 ataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttcaagataact 44032052  T
Q  247 t 247  Q
    |    
T  44032053 t 44032053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 601191 - 601085
Alignment:
Q  112 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 211  Q
    |||||||||||| |||||||||||||||| | |  |||||| ||| | |||||| || ||||||  || | |||||||||||||||||| | |||||| |    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgtttgggagaatctaagaaaacaacttatgacatgt-tgtaagctat 601093  T
Q  212 tttcagct 219  Q
    ||||||||    
T  601092 tttcagct 601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 15579586 - 15579515
Alignment:
Q  159 aagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||||| || ||||| ||| |||||||||||||||||||||| ||||| |||| ||||||  |||||||||    
T  15579586 aagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 31517694 - 31517781
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| ||| | |||||| || |||||||||||  |||||||| |||||||||  |||||||||||||||||  ||| |||||||||    
T  31517694 ataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctc 31517781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 35350722 - 35350683
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagcta 220  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35350722 ggaaacaacttatgacatgtccataagctgttttcagcta 35350683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 28689430 - 28689492
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||| ||||||| ||||||||||||| ||||| |||||||||||  ||| ||||||||    
T  28689430 gagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagct 28689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 4549462 - 4549583
Alignment:
Q  114 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat-aagctgtt 212  Q
    |||||||||  ||| ||||| |||||||   | ||||||  |||| |||||| || ||||| ||||| ||||||||||||||||||||||| ||| ||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaagttgtt 4549561  T
Q  213 ttcagctattttccataagctc 234  Q
    |||| | | |||| ||||||||    
T  4549562 ttcaacaaatttcaataagctc 4549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 15709987 - 15709898
Alignment:
Q  125 ttacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    ||||||||| |||||||  || |||||| ||| | |||||| || |||||||||| ||||| | ||||||||||||  ||||||||||||    
T  15709987 ttacttgaggttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgacatgtagataagctgtttt 15709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 26184830 - 26184777
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||| ||||||||||||| ||||||||||||||| |  |||||||||||||    
T  26184830 ggaaacagcttatgacatgtccataagctgttttcagattatttccataagctc 26184777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 11639390 - 11639470
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||| ||| |||||| ||||| ||||||||||||| |||||||||||| ||||  ||| |||||||||   ||||||||||    
T  11639390 ttagaagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataactt 11639470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 19412581 - 19412637
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||||||||||| |||||||| |||  |||  ||||||||||||    
T  19412581 ttatggaaacaacttatgacatgtccataagctgattttggcttatttccataagct 19412637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 37593598 - 37593734
Alignment:
Q  107 gggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataa 206  Q
    |||||||||||  |||| ||| |||||||||| ||   | |||| | ||| | |||||| || ||| |||| ||| | ||||||||||||||||  ||||    
T  37593598 gggtctgtttgatttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataa 37593697  T
Q  207 gctgttttcagctattttccataagctcgtcagaata 243  Q
    |||||||||||||  ||| ||||||||| ||| ||||    
T  37593698 gctgttttcagcttattttcataagctcttcaaaata 37593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 4699597 - 4699656
Alignment:
Q  175 acttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||  |||| ||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctc 4699656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 28389060 - 28389131
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||  |||| ||| ||  ||||||||||    
T  28389060 agactgcttaggagaacttccggaaacaacttatgatatgtttataaaatgttgtcaacttatttccataag 28389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 38170657 - 38170716
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||| ||||| |||||| ||||| ||||||||||||  ||||| |||||||||||    
T  38170657 agactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcagct 38170716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 43029379 - 43029442
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||| |||||| |||||  |||| ||||||||||||||| |||||||||  ||||||||||||    
T  43029379 ggagagcttatgaaaacagtttattacatgtctataagctattttcagcttatttccataagct 43029442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 44928127 - 44928214
Alignment:
Q  129 ttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| ||  ||||||||| ||| ||||| || || | ||||||||| |||||||||||||||||| |  |||| ||||||||    
T  44928127 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagaaacaacttatgacatgcccgtaagttgttttca 44928214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 45327667 - 45327624
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||||||||||||||||| ||||  |||||||||||    
T  45327667 cttatggaaacaacttatgacatgtccataaattgttttcagct 45327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 17631080 - 17631118
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  17631080 gagagcttatggaaacaacttatgacatgtccataagct 17631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 30418165 - 30418218
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||||||||||||||||||||||| ||||| |  |||||||| ||||||||||    
T  30418165 cttatggaaacaacttatgacatgtccataag-ttatttcagcttttttccataa 30418218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 36514652 - 36514714
Alignment:
Q  170 ggagaacttatggaaacaacttatgaca-tgtctataagctgttttcagctattttccataag 231  Q
    |||||||||||| ||| ||||||||||| ||| || ||||||||||||||| |||| ||||||    
T  36514652 ggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctttttttcataag 36514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 3223748 - 3223711
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  3223748 gaaacaacttatgacatgtttataagttgttttcagct 3223711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 27140560 - 27140507
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||| ||||||||||||| ||||| |||||||||||  ||| |||||||||    
T  27140560 ggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctc 27140507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 32515395 - 32515464
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| ||| | |||||| || ||||| |||||||||||| | ||||||||||| ||||| ||||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttca 32515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 35925780 - 35925723
Alignment:
Q  173 gaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||||||| ||||| ||||||||||||  |||||||||||||| ||  |||||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 37175891 - 37175940
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||||| |||| ||| ||||||||||||||||||||||| | ||||||||    
T  37175891 agactgtttagaagagcttatggaaacaacttatgacatatttataagct 37175940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 3070080 - 3070116
Alignment:
Q  183 aaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||  |||||||||||||||||    
T  3070080 aaacaacttatgacatgttcataagctgttttcagct 3070116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 4482022 - 4481974
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||| ||||    
T  4482022 gagaacttatgaaaacaacttattacatgttcataagctgtttttagct 4481974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 6231802 - 6231842
Alignment:
Q  179 atggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||| |||||||||| |||| ||||||||||||    
T  6231802 atggaaacaactaatgacatgtccataaactgttttcagct 6231842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 24279852 - 24279808
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    |||||| || || |||| |||||||||||||||||||||||||||    
T  24279852 agactgattgggggaacctatggaaacaacttatgacatgtctat 24279808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 29635439 - 29635391
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| ||||| |||||| ||||||||||| |||||| |||||||||||    
T  29635439 gagaatttatgaaaacaagttatgacatgtttataagttgttttcagct 29635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 29723580 - 29723536
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| ||||||||| ||||||||||||| |||| |||||||||    
T  29723580 agaactaatggaaacagcttatgacatgtccataaactgttttca 29723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 43338212 - 43338145
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag-ctattttccataagctc 234  Q
    |||| |||||||||||||||| ||||||||||||  |||| || ||||||| ||||||| |||||||||    
T  43338212 ttagaagaacttatggaaacagcttatgacatgttcataatctattttcagcctatttt-cataagctc 43338145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 45541723 - 45541617
Alignment:
Q  111 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 210  Q
    ||||||||||||| ||| |||||||||| |||  |||||| | ||| |||||||| |||| |||||||||| ||||| ||||||||||||  ||||||||    
T  45541723 ctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctg 45541624  T
Q  211 ttttcag 217  Q
    |||||||    
T  45541623 ttttcag 45541617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 37273237 - 37273166
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||| || ||||| |||||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||    
T  37273237 agactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataag 37273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 31010489 - 31010431
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||||||||||||||| |||||||||||||||||   ||||||||||||    
T  31010489 cttatagaaacaacttatgacatgtccataagctgttttcagcttaattccataagctc 31010431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 30923883 - 30923924
Alignment:
Q  178 tatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagct 30923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 41724301 - 41724256
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||    
T  41724301 aacttatggaaacaacttatgacatgtccataagttgttttcagct 41724256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 43115142 - 43115085
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||||||||||||||| ||||  |||||||||||  |||||||||||||    
T  43115142 ttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctc 43115085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 20192584 - 20192647
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||| |||||| ||||||||||||| |||||||||||||| ||  |||||||||||||    
T  20192584 gagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagctc 20192647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 49772635 - 49772694
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||| |||||||| |||||||||||||||||||| ||||| ||||||| |||| ||||    
T  49772635 agactgtttaggagagcttatggaaacaacttatgagatgtccataagctttttttagct 49772694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 21574593 - 21574519
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| || ||||| |||||| ||||||||||||||||||  |||||||| ||| ||||  |||||||||||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctc 21574519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 52412887 - 52412945
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||  |||||||| ||||    
T  52412887 cttatagaaacaacctatgacatgtttataagctgttttcagcttatttccatatgctc 52412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 41452615 - 41452570
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  41452615 gagaccttatagaaacaacttatgatatgtctataagctgttttca 41452570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 50004739 - 50004682
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||||||||||||||||||||||   ||||||||||||||||  |||| |||||||    
T  50004739 cttatggaaacaacttatgacatgttcttaagctgttttcagcttatttcaataagct 50004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 11253654 - 11253546
Alignment:
Q  110 tctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||||||| ||||| ||| ||||| |||||||  || |||||| |||   |||||| || | |||| ||||  |||||||||||||||| ||||||| ||    
T  11253654 tctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacatatctataaact 11253555  T
Q  210 gttttcagc 218  Q
    |||||||||    
T  11253554 gttttcagc 11253546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 14548699 - 14548775
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||| |||||| ||||||| |||||||| |  ||| |||||||||||||  |||||||||||||  |||||||||||    
T  14548699 gagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataactt 14548775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 26808174 - 26808221
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  26808174 agaacttacggaaacaacttatgacatgtttataaactgttttgagct 26808221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 36200176 - 36200125
Alignment:
Q  183 aaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||||| |||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctc 36200125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 2100088 - 2100126
Alignment:
Q  102 acctagggtctgtttggattgaattacttgagcttatct 140  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  2100088 acctagggtctgtttggattgacttatttgagcttatct 2100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 9279310 - 9279352
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||    
T  9279310 ttatggaaacagcttataacatgtatataagctgttttcagct 9279352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 30750080 - 30750046
Alignment:
Q  183 aaacaacttatgacatgtctataagctgttttcag 217  Q
    ||||||||||||||||||| |||||||||||||||    
T  30750080 aaacaacttatgacatgtccataagctgttttcag 30750046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 36646359 - 36646405
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||||||    
T  36646359 ggagagcttatggaaaccacttatggcatgtccataagctgttttca 36646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 42745134 - 42745068
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||| |||| ||||| ||||||||||||||||||  ||||| |||||||| ||  ||||||||||||    
T  42745134 ttagaagaatttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 48048965 - 48049019
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||| || ||||| |||||||||| |||||||||||||||||  |||||||||    
T  48048965 cttatgaaaccaactcatgacatgtccataagctgttttcagcttatttccataa 48049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 11039322 - 11039379
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||  | ||||||||||    
T  11039322 cttatggaaacatattatgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 24603706 - 24603775
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| | ||| |||||| || ||||||||||| ||||||  |||||||||| | ||||||||||||||    
T  24603706 ataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatgcccataagctgttttca 24603775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 24624315 - 24624254
Alignment:
Q  158 taagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||| || | ||| |||||| ||||| ||||||||||||| |||| ||||||||||||    
T  24624315 taagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagct 24624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 35197404 - 35197367
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgaca 197  Q
    |||||| || ||||||||||||||||||||||||||||    
T  35197404 agactgattgggagaacttatggaaacaacttatgaca 35197367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 42537127 - 42537086
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcag 217  Q
    |||||||||||||||||| ||||||| | |||||||||||||    
T  42537127 cttatggaaacaacttattacatgtccacaagctgttttcag 42537086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 2606288 - 2606348
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||| ||||||||||||||||||||||||| | | || | ||||||||||  |||||||||    
T  2606288 gagatcttatggaaacaacttatgacatgtgtgtcagttcttttcagctaacttccataag 2606348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 3015826 - 3015866
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  3015826 cttatgaaaacaacttatgacatgtccataagatgttttca 3015866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 3044248 - 3044300
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||||||  |||||||||||||| ||  ||| |||||||||    
T  3044248 gaaacaacttatgacatgttcataagctgttttcaacttattttcataagctc 3044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 13804856 - 13804824
Alignment:
Q  184 aacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||||||| ||||||||||||||    
T  13804856 aacaacttatgacatgtccataagctgttttca 13804824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 21865668 - 21865620
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||| ||||||||||||||||||||  || ||| |||||||||    
T  21865668 gagaacttatagaaacaacttatgacatgtccgtacgctattttcagct 21865620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 23785340 - 23785284
Alignment:
Q  178 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||| |||||| | |||| ||||| |||||||||||  |||||||||||||    
T  23785340 tatggaaacagcttatggcgtgtccataagttgttttcagcttgtttccataagctc 23785284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 27290884 - 27290936
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 228  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||  |||||||    
T  27290884 cttatgaaaacagcttatgacatgcccataagctgttttcagcttatttccat 27290936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 30573892 - 30573940
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| |||||| ||||| |||||  |||||||||||||||||    
T  30573892 gagaacttatgaaaacaaattatggcatgttcataagctgttttcagct 30573940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 31403110 - 31403074
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataag 207  Q
    |||| |||||||||||||||||| |||||||||||||    
T  31403110 gagagcttatggaaacaacttattacatgtctataag 31403074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 42817200 - 42817248
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||||||||| | ||||||||||| ||||| |||||||||||    
T  42817200 gagagcttatggaaacagcatatgacatgtccataagttgttttcagct 42817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 47132086 - 47132038
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  47132086 gagaacttatgaaaacaacttatgtcatatccataaactgttttcagct 47132038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 281760 - 281889
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    ||||||||||||||||||| ||||||||| |||| ||     |||||  ||| | |||||| || ||||| || |||||| |||||||||||||||||||    
T  281760 tagggtctgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctat 281859  T
Q  205 aagctgttttcagctattttccataagctc 234  Q
    ||| |||||||||||  ||||||| |||||    
T  281860 aagttgttttcagcttatttccatgagctc 281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 2767716 - 2767785
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||||||||||||| ||| |||||||| ||||||||||||| ||||||||||| ||||| ||||||||||    
T  2767716 agactgcttaggagagcttgtggaaacagcttatgacatgtccataagctgtttccagct-ttttccataa 2767785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 1669775 - 1669824
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  1669775 ggagagcttatgaaaacaacttatgacatgtctataagctgttttcagct 1669824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 2460129 - 2460192
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||    
T  2460129 gagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctc 2460192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 9667973 - 9668026
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagctc 9668026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 3155253 - 3155209
Alignment:
Q  185 acaacttatgacatgtctataagctgttttcagctattttccata 229  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  3155253 acaacttatgacatgtctataagctgttttcagcttatttccata 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 7785733 - 7785785
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| ||||||||||||||||||| |||||||||||  |||||||||||||    
T  7785733 gaaacagcttatgacatgtctataagttgttttcagcttatttccataagctc 7785785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 20377894 - 20377942
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttc 215  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  20377894 ttaggagagcttatgaaaacaacttatgacatgtctataagttgttttc 20377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 24670512 - 24670449
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||| |||||||||||||||||||| ||| |||||| ||||||  ||| |||||||||    
T  24670512 gagaacttatagaaacaacttatgacatgtcaatatgctgttatcagcttattttcataagctc 24670449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 4420730 - 4420672
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| ||||||| |||||||||||  |||||||||||||||||  |||||||||||||    
T  4420730 cttatagaaacaaattatgacatgttcataagctgttttcagcttatttccataagctc 4420672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 9027665 - 9027607
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||  ||| |||||||||    
T  9027665 cttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctc 9027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 32917300 - 32917246
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||| || ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  32917300 agactgtttgggagagcttatggaaacaacttatgacatgtccataagctttttt 32917246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 33498777 - 33498651
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    |||||||||||| |||||| ||| ||||| ||||| |   ||| || | ||||| |||||  || | ||| |||||| ||||||||||||||||||||||    
T  33498777 tagggtctgtttagattgacttatttgaggttatcaaccggtaaaaacacttctgagactttttggtagagcttatgaaaacaacttatgacatgtctat 33498678  T
Q  205 aagctgttttcagctattttccataag 231  Q
    | | | |||||||||  ||||||||||    
T  33498677 aggttattttcagcttatttccataag 33498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 34403958 - 34403884
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| ||||||||| ||| | ||||||||||||||||||  ||||| |||||||| ||  |||||||||||||    
T  34403958 agactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctc 34403884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 27595521 - 27595590
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| ||| | |||||| || |||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttca 27595590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 30523753 - 30523692
Alignment:
Q  169 aggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||| ||||||||||||||||||| |||||  |||||||||||||| ||| |||| ||||    
T  30523753 aggagatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataa 30523692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 27909623 - 27909679
Alignment:
Q  178 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||  ||||||||||| ||||| |||||||||||  |||||||||||||    
T  27909623 tatggaaacaatatatgacatgtccataagttgttttcagcttatttccataagctc 27909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 32577964 - 32578032
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 239  Q
    |||| |||||| |||||||||||||||||||  | ||||||||||||||  |||||||| |||| ||||    
T  32577964 gagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcag 32578032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 33832251 - 33832299
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| ||||    
T  33832251 gagaacttatgaaaacaacttatgacatgtttataagttgtttttagct 33832299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 34939605 - 34939537
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 239  Q
    |||| |||||||||||||||||||||| |||  |||| |||||||||||  ||||||||| ||| ||||    
T  34939605 gagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcag 34939537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 2455906 - 2455839
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||| |||||||||||||||||||||||| | |||| || |||||| ||  |||||||||||||    
T  2455906 ttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctc 2455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 6310227 - 6310266
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  6310227 ggagagcttatgaaaacaacttatgacatgtctataagct 6310266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 6537023 - 6536968
Alignment:
Q  187 aacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaat 242  Q
    ||||||||||||||  ||||| |||||||||||  ||||||||||||| |||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctcttcagaat 6536968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 8364955 - 8365002
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||||| |||| ||||||||| || |||||||||||||||    
T  8364955 agaacttatggaaataactgatgacatgtttacaagctgttttcagct 8365002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 10836903 - 10836844
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||||||||||||||| ||||||||| || |||| |||| ||||| || |||||||||    
T  10836903 aacttatggaaacaacttctgacatgtccattagctattttaagctagttcccataagct 10836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 27615251 - 27615310
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||||||  || |||||||||    
T  27615251 gagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttccataa 27615310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 1575986 - 1575944
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||||||| ||||||||||||||||||  ||||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttt 1575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 2034430 - 2034472
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| |||||||||| || |||||||||||||||||    
T  2034430 ttatggaaacagcttatgacatttccataagctgttttcagct 2034472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 2117490 - 2117432
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||  |||| ||||||||    
T  2117490 cttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctc 2117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 7148817 - 7148695
Alignment:
Q  112 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 211  Q
    ||||||| |||| ||| |||||||||||||   | |||||| ||| | ||| || | || ||| |||| |||||||||||||||| |||| ||||||| |    
T  7148817 tgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctat 7148718  T
Q  212 tttcagctattttccataagctc 234  Q
    ||||| ||  ||| |||||||||    
T  7148717 tttcaacttattttcataagctc 7148695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 1019597 - 1019646
Alignment:
Q  180 tggaaacaacttatgacatgtctataagctgttttcagctattttccata 229  Q
    |||||||||||||| ||||||||||||| |||||| ||||  ||||||||    
T  1019597 tggaaacaacttataacatgtctataagttgtttttagcttatttccata 1019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 10616518 - 10616567
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| ||||||||||||||||||||||||||  |||| ||| |||||||    
T  10616518 ggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagct 10616567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 27693417 - 27693462
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  27693417 gagaatttatggaaacaacttatgacatgttcataagctattttca 27693462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 31668681 - 31668710
Alignment:
Q  190 ttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||||||||||||||    
T  31668681 ttatgacatgtctataagctgttttcagct 31668710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 2460930 - 2460966
Alignment:
Q  180 tggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  2460930 tggaaacaacttattacatgtctataagctattttca 2460966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 4246493 - 4246457
Alignment:
Q  180 tggaaacaacttatgacatgtctataagctgttttca 216  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  4246493 tggaaacaactcatgacatgtccataagctgttttca 4246457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 7901785 - 7901856
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||| | |||||| || | ||| |||||| |||||||||| || |||||||||| ||||||||||||    
T  7901785 ataagcccttgtgagactgtttggaagagcttatg-aaacaacttaagatatgtctataaactgttttcagct 7901856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 7945861 - 7945925
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| ||||| |||||||||||| ||||| ||| || |||||| ||||  |||||||||||||    
T  7945861 ggagaaattatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctc 7945925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 28776657 - 28776621
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcag 217  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  28776657 ggaaacagcttatgacttgtctataagctgttttcag 28776621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 28798361 - 28798325
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcag 217  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  28798361 ggaaacagcttatgacttgtctataagctgttttcag 28798325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 31624181 - 31624137
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttca 31624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 31686341 - 31686389
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||  ||||||||||||||| || ||||| ||||||||||||    
T  31686341 gagaacttatcaaaacaacttatgacaagtttataatctgttttcagct 31686389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 33284330 - 33284290
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||| |||||||||||||||||| || ||||||||||||||    
T  33284330 cttagggaaacaacttatgacatttccataagctgttttca 33284290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 34404182 - 34404118
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||||| | ||| |||||| |||||| |||||||| ||  |||| ||||||||    
T  34404182 ggagaacttatggaaacaccctattacatgtatataagttgttttcaacttatttctataagctc 34404118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 34404702 - 34404750
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    |||||||||||| ||| | ||||||||||||  ||||||||||||||||    
T  34404702 ggagaacttatgaaaatatcttatgacatgtacataagctgttttcagc 34404750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 34939837 - 34939777
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||| ||||||| ||||||||||||| ||||  |||||||||||  |||||||||    
T  34939837 ggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataa 34939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 7674751 - 7674692
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7674751 agactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagct 7674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 18700471 - 18700415
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  18700471 cttatggaaacaacttatgacatgtctataagttgttttcagct-ttatccataagct 18700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 35963337 - 35963271
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||||| | | ||||||||||| ||||| |||||||||||  ||||||||||||    
T  35963337 ttaggagaacttatggaaatagcgtatgacatgtccataagttgttttcagcttatttccataagct 35963271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 11700362 - 11700402
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcag 217  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11700362 ttatggaaacaacttatgacatgtccataagctgttttcag 11700402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 10125696 - 10125759
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||  ||| |||||||||    
T  10125696 gagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctc 10125759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 32172746 - 32172688
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 228  Q
    ||||| |||||||||||||||||||||||||| ||||||  |||||||||  |||||||    
T  32172746 ggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccat 32172688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 37690614 - 37690692
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttta 249  Q
    |||| |||||| | ||||| ||||||||||  |||||||||||||||||  |||||||||||||  || ||||||||||    
T  37690614 gagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataacttta 37690692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 40499700 - 40499742
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  40499700 ttaggagagcttatggaaacaacttatgacatgtccataagct 40499742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 985716 - 985647
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 229  Q
    |||||||||||||||  ||||| ||| ||||||||||||||| | |||| ||||||||||  ||||||||    
T  985716 agactgcttaggagagattatgcaaataacttatgacatgtccacaagcggttttcagcttatttccata 985647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 11457185 - 11457148
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttt 213  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11457185 cttatggaaacaacttatgacatgtccataagctgttt 11457148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 12467212 - 12467163
Alignment:
Q  184 aacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||| ||||||||||||||||||  ||| ||||||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 18704025 - 18704074
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||    
T  18704025 gaaacaacttataacatgtctataagttgttttcagcttatttccataag 18704074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 38047798 - 38047895
Alignment:
Q  112 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    ||||| |||||  |||||||| ||||||||  | ||||||  ||| |  ||||| || ||||| |||||||||||||||||||||||||| |||||||    
T  38047798 tgtttagattggcttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagct 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 2468535 - 2468475
Alignment:
Q  160 agactgcttaggagaacttatggaaacaactt-atgacatgtctataagctgttttcagct 219  Q
    |||||| || ||||||||||||||||||| || |||||||||| |||||||||||| ||||    
T  2468535 agactgttttggagaacttatggaaacaattttatgacatgtccataagctgttttgagct 2468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 37526177 - 37526253
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||| |||||| | ||||| ||||||||||  |||||||||||||||||  |||||||||||||  ||||| |||||    
T  37526177 gagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaactt 37526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 37588338 - 37588414
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||| |||||| | ||||| ||||| ||||  |||||||||||||||||  |||||||||||||  |||||||||||    
T  37588338 gagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataactt 37588414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 10272414 - 10272457
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||    
T  10272414 cttatagaaacaacttatgacatgtctgtaagttgttttcagct 10272457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 11297112 - 11297235
Alignment:
Q  109 gtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagc 208  Q
    ||||||||| ||||| ||| || ||||||||||   | |||| | ||| |||||||| ||   ||| ||||||||||||||||| |||||||| || |||    
T  11297112 gtctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagc 11297211  T
Q  209 tgttttcagctattttccataagc 232  Q
    | |||||||||  ||| |||||||    
T  11297212 tattttcagcttattttcataagc 11297235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 15074730 - 15074789
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||| ||| |||| || |||||||| |||||||||||||||||  ||||||||||||    
T  15074730 aacttattgaagcaacgtacgacatgtccataagctgttttcagcttatttccataagct 15074789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 17368768 - 17368709
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||||||||| ||||||||||||||||||  ||| || ||||||||||  |||||||||    
T  17368768 gagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataa 17368709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 37611193 - 37611256
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||| ||||||||| ||||||||  ||||||||||||||| |  |||||||||||||    
T  37611193 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctc 37611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 37787923 - 37787986
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||| ||||||||| ||||||||  ||||||||||||||| |  |||||||||||||    
T  37787923 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctc 37787986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 38766524 - 38766567
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttc 215  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||    
T  38766524 agaacttatggaaacaacttatgacacgtccataagttgttttc 38766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 42646827 - 42646792
Alignment:
Q  106 agggtctgtttggattgaattacttgagcttatcta 141  Q
    |||||||||||||||||| |||||||||||||||||    
T  42646827 agggtctgtttggattgacttacttgagcttatcta 42646792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 3504818 - 3504760
Alignment:
Q  189 cttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||||||||||| | ||||||||||||||||  ||| |||||||||  |||||||||||    
T  3504818 cttatgacatgtttgtaagctgttttcagcttatttacataagctctccagaataactt 3504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 5951946 - 5952008
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||| ||||||||| |||||||||| | | ||||||| |||||||||||  ||||||||||||    
T  5951946 gagagcttatggaagcaacttatgatagggctataagttgttttcagcttatttccataagct 5952008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 7853734 - 7853688
Alignment:
Q  170 ggagaacttatggaaacaacttatgaca-tgtctataagctgttttc 215  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||    
T  7853734 ggagaacttatggaaacaacttatgacattgttcataagctgttttc 7853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 18853107 - 18853041
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||| ||||| ||||| |||| |||||| |||| ||||||||| ||||  ||||||||||||    
T  18853107 ttaggagaagttatgaaaacagcttacgacatgcctattagctgtttttagcttatttccataagct 18853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25705648 - 25705682
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  25705648 gaaacaacttgtgacatgtctataagctgttttca 25705682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 34117524 - 34117570
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    ||||| |||||||| ||||||||||||||| | ||||||||||||||    
T  34117524 ggagagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 17258860 - 17258929
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 239  Q
    ||||||| |||| ||| | ||||||||||||  |||||||||||||||||  ||| ||||||||| ||||    
T  17258860 ggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctcttcag 17258929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 17369427 - 17369480
Alignment:
Q  181 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||| ||||||||||||||||||| ||||||||| |  |||| ||||||||    
T  17369427 ggaaacagcttatgacatgtctataagttgttttcagattatttctataagctc 17369480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 37489062 - 37489103
Alignment:
Q  173 gaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    ||||||||| ||||||||||||||||||  ||||||||||||    
T  37489062 gaacttatgaaaacaacttatgacatgttgataagctgtttt 37489103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 499708 - 499768
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||||||||| ||||| ||||||||||||  | ||| |||||||||||  |||||||||    
T  499708 ggagaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 2092452 - 2092392
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    ||||| ||||||||| | ||||||||||||| ||||||||||||  ||| ||| |||||||    
T  2092452 gagaagttatggaaatagcttatgacatgtccataagctgttttttgctttttaccataag 2092392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 2092522 - 2092582
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| ||||| ||||||||||||| |||||| ||||| |||||||| || |||| |||||    
T  2092522 ggagagcttattgaaacaacttatggcatgtccataagttgttttcaactttttttcataa 2092582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 6109576 - 6109512
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||||| || |||||| ||||| ||||| |||||||||||  |||||| ||||||    
T  6109576 ggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctc 6109512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 9104209 - 9104173
Alignment:
Q  189 cttatgacatgtctataagctgttttcagctattttc 225  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  9104209 cttatgacatgtctataagctgttttcaactaatttc 9104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 14295598 - 14295550
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||| ||||| ||||||| ||||| |||||||||||||||||    
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagct 14295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 28586743 - 28586807
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||||| | |||||||||| ||  ||||||||||||||||  |||| ||||||||    
T  28586743 ggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctc 28586807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 50800007 - 50800056
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  50800007 ggagaactaatgtaaacaacttatgacatgtctataagctgttttcagct 50800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 6978941 - 6978988
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  6978941 agaacttattgaaataacttatgacatgtctataagctgttttcagct 6978988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 7367966 - 7368077
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    ||||||||||||||||||| ||| ||||| ||||||| | | |||| | ||| | |||||| || ||||| || ||| ||||| |||||||||||| |||    
T  7367966 tagggtctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttat 7368065  T
Q  205 aagctgttttca 216  Q
    |||||| |||||    
T  7368066 aagctgctttca 7368077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 27123330 - 27123393
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||    
T  27123330 gagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 27970144 - 27970087
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||||||||||||||||||||||||||||||   || |||||||||||    
T  27970144 ttatgaaaacaacttatgacatgtctataagctgttttcagtacttatccataagctc 27970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 1137813 - 1137741
Alignment:
Q  162 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||||||||||||| ||||| ||||||||||||  ||||| ||||||||| |  |||||||||||||    
T  1137813 actgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctc 1137741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2874603 - 2874663
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagc 232  Q
    |||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||    
T  2874603 agaacttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagc 2874663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 3176073 - 3176141
Alignment:
Q  162 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||| |||||||| |||||| ||||| |||||| |||||||||||| |||||||||||  |||||||||    
T  3176073 actgtttaggagagcttatgaaaacatcttatgtcatgtctataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 6987708 - 6987782
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| || ||||| |||||||| ||||||||||||||||| |||| || |||||| ||  |||||||||||||    
T  6987708 agactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctc 6987782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 25571361 - 25571304
Alignment:
Q  162 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||||||||||||||||||  |||||| ||||  |||||||||||||||||    
T  25571361 actgtttaggagaacttatggaaacagtttatgatatgttcataagctgttttcagct 25571304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 214
Target Start/End: Complemental strand, 53315484 - 53315375
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    ||||||||||||||||||| ||| ||||||||||| |   |||||||| | | |||||||  ||  |||| |||||| ||||||| ||| ||||||| ||    
T  53315484 tagggtctgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccat 53315385  T
Q  205 aagctgtttt 214  Q
    ||||| ||||    
T  53315384 aagctatttt 53315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 4243656 - 4243617
Alignment:
Q  173 gaacttatggaaacaacttatgacatgtctataagctgtt 212  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  4243656 gaacttatggaaacaacttatgacatgtccataatctgtt 4243617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 11264404 - 11264330
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||| || ||||| | ||| ||| |||||||||||||||| |||| ||||||||| ||  |||||||||||||    
T  11264404 agactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagctc 11264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 19305019 - 19304961
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 228  Q
    |||||| || |||||||| ||||||||||||| ||||| |||||||||||  |||||||    
T  19305019 ggagaatttgtggaaacagcttatgacatgtccataagttgttttcagcttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 29467607 - 29467661
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||||  ||||||||||||| |||||||||||||||||  |||||||||    
T  29467607 cttatagaaacggcttatgacatgtccataagctgttttcagcttatttccataa 29467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 32071954 - 32071912
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||    
T  32071954 ttatggaaacaacttatgacacgtccataagctgttttaagct 32071912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 45128288 - 45128350
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||| ||||||||||||||| ||  |||||| || ||||||||||||||  ||||||||||||    
T  45128288 gagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagct 45128350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 2996665 - 2996620
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||| |||||| ||||||||||||||||||| ||||||| ||||||    
T  2996665 gagagcttatgaaaacaacttatgacatgtccataagcttttttca 2996620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 4691937 - 4691892
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||||||||||||||||| | ||| | |||||||||||    
T  4691937 aacttatggaaacaacttatgacatgcccatatgttgttttcagct 4691892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 6428176 - 6428047
Alignment:
Q  105 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 204  Q
    |||||| |||||| ||||| ||| |||||||||| ||   |||||||| ||| | |||| | ||  ||||  ||||| ||||||||||||||||||| ||    
T  6428176 tagggtttgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccat 6428077  T
Q  205 aagctgttttcagctattttccataagctc 234  Q
    ||| || ||| |||   |||||||||||||    
T  6428076 aagttgatttaagcatatttccataagctc 6428047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 23676783 - 23676727
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||||| ||| ||||||| ||||||| ||||  ||||||||||||    
T  23676783 cttatggaaacaacttatggcatatctataa-ctgttttaagcttatttccataagct 23676727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 9841158 - 9841114
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    ||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  9841158 ggagaacatatcgaaacaacatatgacatgtccataagctgtttt 9841114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 14011307 - 14011263
Alignment:
Q  190 ttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||    
T  14011307 ttatcacatgtctttaagctgttttcagcttatttccataagctc 14011263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 20936210 - 20936266
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||||| ||||||||||||| ||||  |||||||||||||| ||  |||||||||    
T  20936210 aacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataa 20936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 21592983 - 21593043
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| ||||| ||| || |||||||||||| ||||||||| ||||||||  |||||||||    
T  21592983 ggagagcttattgaagcagcttatgacatgtttataagctgctttcagcttatttccataa 21593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 21953041 - 21952997
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    ||||| |||||||||| ||||||||||||||| |||| |||||||    
T  21953041 ggagagcttatggaaagaacttatgacatgtccataacctgtttt 21952997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 22662224 - 22662288
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||| ||| ||||||||| ||||  ||||||| |||||||||  |||||||| ||||    
T  22662224 ggagaacttatgaaaaaaacttatgatatgttcataagctattttcagcttatttccatacgctc 22662288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 24370932 - 24370979
Alignment:
Q  174 aacttatggaaacaacttatgacatgtct--ataagctgttttcagct 219  Q
    ||||||||||||||||||||||||||| |  |||||| ||||||||||    
T  24370932 aacttatggaaacaacttatgacatgtatacataagccgttttcagct 24370979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 27124131 - 27124167
Alignment:
Q  180 tggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  27124131 tggaaacaacttattacatgtctataagctattttca 27124167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 53155352 - 53155304
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||| ||||||||||||||||||||||||  || ||||||||    
T  53155352 gagagcttatgcaaacaacttatgacatgtctataaattgctttcagct 53155304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 26410396 - 26410308
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctat-tttccataagctc 234  Q
    |||||| ||||| ||||||||| ||||| |||||||||||| || |||||||||| | |||||||||| |||| | |||||||||||||    
T  26410396 ataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataagctc 26410308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 11183625 - 11183574
Alignment:
Q  183 aaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctc 11183574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 14949969 - 14949910
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||| |||||||| |||||| ||| ||||||||||||||| |||||||||||||||||    
T  14949969 agactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagct 14949910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 6950415 - 6950337
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 248  Q
    ||||| |||||| ||||||| ||||||||||| ||||| |||||||||||  ||||||||||||| | || ||||||||    
T  6950415 ggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggataacttt 6950337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 10939523 - 10939451
Alignment:
Q  115 ttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaaca 187  Q
    ||||||||||||| ||||| |||||||   |||||||| ||||| |||||| ||||||||||||||| |||||    
T  10939523 ttggattgaattatttgagtttatctacctgtataagcacttctgagactgtttaggagaacttatgaaaaca 10939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 26479877 - 26479805
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 243  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||   |||||||||||||  |||||||    
T  26479877 gagagcttatggaaacaacttatgtcatgtctataagtttttttcagcgtatttccataagctctccagaata 26479805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 43504853 - 43504783
Alignment:
Q  161 gactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    ||||| || |||||||| ||| |||||||||| ||| ||| ||||||||||||||||||  ||||||||||    
T  43504853 gactgtttcggagaactgatgaaaacaacttacgacttgtttataagctgttttcagcttatttccataag 43504783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 11813082 - 11813131
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||||||||    
T  11813082 ggagaacttatggaaacaatttatgacatatccataggctgttttcagct 11813131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 13000408 - 13000464
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||| |||||||||||||||||| | ||| |||||||||||  ||||||||||||    
T  13000408 ttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 25869251 - 25869303
Alignment:
Q  178 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||||| ||||||||||||||| ||||| |||||||||||  |||||||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttccataa 25869303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 30259206 - 30259146
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||| |||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||    
T  30259206 gagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataag 30259146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 39551186 - 39551230
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||    
T  39551186 ggagaatttatggaaacaacttatgacatgtccaaaagctgtttt 39551230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 43709349 - 43709309
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  43709349 cttatggaaataacttatgacatgtctataagctattttca 43709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 3090264 - 3090190
Alignment:
Q  144 agtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||| ||||| |||||  |||| ||| |||||| |||||||||||| ||||||  ||||||||||||||||    
T  3090264 agtataagctcttctgagactatttag-agatcttatgaaaacaacttatggcatgtcagtaagctgttttcagct 3090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 11569424 - 11569483
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||| ||| |||| |||||||||||| ||||||||||||  ||||| |||||||||||    
T  11569424 agactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagct 11569483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 30191095 - 30191178
Alignment:
Q  147 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||| ||| | |||||| || ||||| |||||||||||||||||||||||||  | ||  |||||||||||  |||||||||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 30987969 - 30988012
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||    
T  30987969 gagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 45071467 - 45071428
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  45071467 ggagagcttatgaaaacaacttatgacatgtctataagct 45071428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 4560593 - 4560531
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||| ||||||| |||||||  |||||||||||||| |  |||| ||||||||    
T  4560593 agaacttatggaaataacttataacatgtcagtaagctgttttcagattatttcgataagctc 4560531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 31875578 - 31875636
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||||||||||||| ||||||  |||||| ||  ||| |||||||||    
T  31875578 cttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctc 31875636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 34293326 - 34293380
Alignment:
Q  336 aatttcttg-ttcaaccaaggtcaccatcagcagtgatatacaagagccatgaag 389  Q
    ||||||||| |||||| ||| |||||||||||||||||| | |||||||||||||    
T  34293326 aatttcttggttcaacaaagatcaccatcagcagtgatacataagagccatgaag 34293380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 40357084 - 40356972
Alignment:
Q  107 gggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatga---catgtcta 203  Q
    ||||||||||||||||| ||| ||||| ||||||| | |||||||| ||||  ||| || ||| |||  ||||| |||| | |||||||   |||||| |    
T  40357084 gggtctgtttggattgatttatttgagtttatctacaggtataagcacttcagagattgtttatgagggcttattgaaatagcttatgacaccatgtcca 40356985  T
Q  204 taagctgttttca 216  Q
    |||||||||||||    
T  40356984 taagctgttttca 40356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 42597512 - 42597470
Alignment:
Q  189 cttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||||||||||||||||||||||||| ||  ||||||||||    
T  42597512 cttatgacatgtctataagctgttttcaacttatttccataag 42597470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 4055600 - 4055657
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||  ||||| |||||||    
T  4055600 ttatagaaataacttatgacatgtccataaactgttttcagcttatttccttaagctc 4055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 8255484 - 8255439
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||||||||| |||||||||  ||||| ||||||||    
T  8255484 gagaacttatggaaacaactaatgacatgtgcataagttgttttca 8255439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 10062118 - 10062167
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| ||||||| ||||  ||||||||| ||||||||||||||||||||    
T  10062118 ggagagcttatggcaacattttatgacatttctataagctgttttcagct 10062167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 10383975 - 10383914
Alignment:
Q  173 gaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||| ||||| |||||||||| |  ||||||||||| |||||  |||||||||||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctc 10383914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 11188122 - 11188179
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag 217  Q
    |||||| |||||| |||| ||| ||||| ||||||||||||||||||  |||||||||    
T  11188122 agactgtttaggataactaatgaaaacagcttatgacatgtctataacttgttttcag 11188179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 11795166 - 11795121
Alignment:
Q  189 cttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||| |||| ||||||||||||  |||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctc 11795121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 27119910 - 27119955
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||| |||| ||| |||||||||||||||| |||||||||||    
T  27119910 aacttatgaaaaccactaatgacatgtctataagttgttttcagct 27119955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 34293163 - 34293215
Alignment:
Q  9 agcataggtgaaattattaccaattatatcaaatctacaaggtacaaaaacatg 62  Q
    |||| |||| |||||||||||||||||||  ||||||||||||| |||||||||    
T  34293163 agcacaggtcaaattattaccaattatatacaatctacaaggta-aaaaacatg 34293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 2458543 - 2458607
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||| | ||| |||||| |||||  ||||||||||||||| |  |||||||||||||    
T  2458543 ggagaacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctc 2458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 5088945 - 5088881
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| ||||||||||||  |||| ||||||| |||||||||||||| ||  |||| ||||||||    
T  5088945 ggagagcttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctc 5088881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 11118974 - 11119022
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    ||||| |||||||| || |||||||||||||  ||||||||||||||||    
T  11118974 ggagagcttatggagactacttatgacatgttcataagctgttttcagc 11119022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 11770990 - 11771034
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||    
T  11770990 agaacttatgaaaacaacttatgatatgtctatacgttgttttca 11771034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 12361284 - 12361208
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||| ||||| |||| | ||||||||||||| |||||||||||||| ||  ||||||| |||||  | |||||||||    
T  12361284 gagatcttatagaaatagcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataactt 12361208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 26371057 - 26370997
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||| ||||||||||| |||||||||||||   | || |||||||||||| ||||||||||    
T  26371057 gagatcttatggaaactacttatgacatgtgcgtcagttgttttcagctaatttccataag 26370997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 32840952 - 32841012
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgaca-tgtctataagctgttttcagct 219  Q
    |||||| || |||||||||||| ||||||||||||||| |||  ||||| |||||||||||    
T  32840952 agactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagct 32841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 34849207 - 34849135
Alignment:
Q  160 agactgcttaggagaacttatggaaacaactt-atgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||| || |||||||| ||| ||||||||| |||||||||  |||||| ||||||||||  ||||||||||    
T  34849207 agactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttccataag 34849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 37740411 - 37740462
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 229  Q
    ||||||||||||||||||||||||| |||| || |||||||||  ||||||||    
T  37740411 ttatggaaacaacttatgacatgtccataa-ctattttcagcttatttccata 37740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 39049359 - 39049319
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| ||||||||||| ||||||| ||||||||||||||    
T  39049359 cttatgaaaacaacttataacatgtcaataagctgttttca 39049319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 42215283 - 42215347
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||| ||| ||||| |||||||| |||  |||||||||||||||||  ||| |||||||||    
T  42215283 ggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctc 42215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 159891 - 160014
Alignment:
Q  111 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 210  Q
    ||||||||||||  ||| |||||||||||||  | ||||| | ||| | | |||  || |||||||| |||||||||  ||||||||||||||||||| |    
T  159891 ctgtttggattggcttatttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaacagtttatgacatgtctataagcag 159990  T
Q  211 ttttcagctattttccataagctc 234  Q
    |||||||||  |||||| ||||||    
T  159991 ttttcagcttatttccacaagctc 160014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 8820259 - 8820333
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||| |||| |||||||||||| ||| ||||||||  | |||||||||||||||  |||||||||||||    
T  8820259 agactgcttaagagaccttatggaaacagcttctgacatgttcacaagctgttttcagcttatttccataagctc 8820333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 34652019 - 34652077
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  34652019 cttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctc 34652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 43529773 - 43529899
Alignment:
Q  108 ggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataag 207  Q
    |||||||||| ||||| ||| |||||||||||||   |||||||| ||||| | |||| || |||||| ||||| ||||| |||||| |||||  |||||    
T  43529773 ggtctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataag 43529872  T
Q  208 ctgttttcagctattttccataagctc 234  Q
    || ||||||| |  ||| |||||||||    
T  43529873 ctattttcagtttattttcataagctc 43529899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 14316122 - 14316171
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  14316122 ggagagcttatggaaacaacttatgacatatgtataagctgttttcagct 14316171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 247
Target Start/End: Original strand, 28677576 - 28677713
Alignment:
Q  110 tctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||||||||||||| ||  |||||||||| ||   | |||||  || ||||||||| || |||||||||||| ||||| |||||||||| |  ||||| |    
T  28677576 tctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataagtt 28677675  T
Q  210 gttttcagctattttccataagctcgtcagaataactt 247  Q
    |||||| |||  |||||||||||||  || ||||||||    
T  28677676 gttttcggcttatttccataagctctccaaaataactt 28677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 787424 - 787376
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  787424 gagaacttatgaaaacagcttatgacatgtccataagctgttttcagct 787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 1647332 - 1647265
Alignment:
Q  167 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||||| ||||| |||||||||||   |||||||||||||||||  |||||||||||||    
T  1647332 ttagaagaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctc 1647265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 28803451 - 28803546
Alignment:
Q  114 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 209  Q
    |||||||||| ||| |||||||||||||   | |||||| | | | |||||| ||  |||||| |||||||||||||||||||||||| |||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagct 28803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 40158821 - 40158734
Alignment:
Q  160 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 247  Q
    |||||| || || ||||||||| ||||| |||||||||||| |||||| |||||||||||   || |||||||||  |||||||||||    
T  40158821 agactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataactt 40158734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 44606089 - 44606136
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  44606089 agaacttatgaaaacaacttatgacatgtccataagttgttttcagct 44606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 1939323 - 1939373
Alignment:
Q  184 aacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctc 1939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 17380661 - 17380607
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctatttt 224  Q
    ||||| |||||| ||||||||| ||||||||| ||||||||||||||||| ||||    
T  17380661 ggagatcttatgtaaacaacttgtgacatgtcaataagctgttttcagctttttt 17380607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 32821895 - 32821838
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||||||||||||||| ||||||||||||||| |  |||| ||||||||    
T  32821895 ttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctc 32821838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 38388780 - 38388707
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctg-ttttcagctattttccataagctcgtcagaat 242  Q
    ||||||||||||| |||||||||||||||||  |||| ||| |||||||||  |||||||||| || |||||||    
T  38388780 ggagaacttatggtaacaacttatgacatgttcataaactgtttttcagcttatttccataagttcttcagaat 38388707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 9996895 - 9996803
Alignment:
Q  106 agggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacat 198  Q
    |||| |||||||| |||| ||| ||||||||||| |  || |||||  ||| | ||||||||| ||||| ||||| |||||||||||||||||    
T  9996895 agggcctgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacat 9996803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 11344753 - 11344793
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  11344753 cttatggaaacaacttatgacatgtccataaactgttttca 11344793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 37186277 - 37186341
Alignment:
Q  154 cttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 218  Q
    ||||||| |||| || |||||  |||| ||||||||||||||||||||| | |||||||||||||    
T  37186277 cttctaaaactgtttcggagagattatagaaacaacttatgacatgtctgtgagctgttttcagc 37186341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 41817269 - 41817197
Alignment:
Q  162 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||||||| ||||| ||||| ||||||||||||  ||||  |||||||||||  |||||||||||||    
T  41817269 actgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctc 41817197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 43985290 - 43985238
Alignment:
Q  182 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||||||||||||||||||| ||||||| |||||| ||  |||||||||||||    
T  43985290 gaaacaacttatgacatgtccataagcttttttcaacttgtttccataagctc 43985238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 1830138 - 1830075
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||| |||||||||||| ||||||||||||| ||| |  ||||||||||  ||||||||||||    
T  1830138 ggagagcttatggaaacatcttatgacatgtccatagggagttttcagcttatttccataagct 1830075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 9878665 - 9878704
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttc 215  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  9878665 cttatggaaacaacttatgacatgtccataagttgttttc 9878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 10285947 - 10285892
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 231  Q
    |||||| ||| ||||||||||||||| |||||||||||||| ||  ||||||||||    
T  10285947 cttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataag 10285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 30538156 - 30538199
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  30538156 cttatagaaacaacttatgacatgtccataagttgttttcagct 30538199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 41032933 - 41032992
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||||||| |||||||||| |  |||||||||||| |||||||||||  |||||||||    
T  41032933 gagaacttatagaaacaacttcttccatgtctataagttgttttcagcttatttccataa 41032992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 43065428 - 43065491
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||| ||||||||||||||||||| ||||  |||||||||||  |||| ||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctc 43065491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 14451040 - 14451090
Alignment:
Q  183 aaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||||||| | |||||||||||||||||  |||||| |||||    
T  14451040 aaacaacttatgacatgaccataagctgttttcagcttatttccacaagct 14451090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 27237872 - 27237930
Alignment:
Q  172 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||||||| |||||| ||||||||||||  |||||||||||| ||||  |||||||||    
T  27237872 agaacttatagaaacagcttatgacatgtacataagctgtttttagcttatttccataa 27237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 45314960 - 45314914
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcag 217  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||||    
T  45314960 gagaacttatgtaaacaacttatgacatatttataagttgttttcag 45314914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 4550849 - 4550796
Alignment:
Q  161 gactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 214  Q
    ||||| || ||||| |||||||||||||||||||||||||  ||||||| ||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 6561424 - 6561391
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagct 209  Q
    ||||||||||||||||||||||| ||||||||||    
T  6561424 cttatggaaacaacttatgacatatctataagct 6561391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 15120276 - 15120227
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| |||||||||||||||||||||||||  || ||||||||| ||||    
T  15120276 ggagagcttatggaaacaacttatgacatgttcattagctgttttaagct 15120227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 16398449 - 16398494
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||| |||| ||||||||||||||||||| ||||||||| ||||    
T  16398449 gagaacatatgaaaacaacttatgacatgtccataagctgtcttca 16398494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 32106777 - 32106822
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||    
T  32106777 gagaacttatgaaaacagcttatgacatatctgtaagctgttttca 32106822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 33942228 - 33942179
Alignment:
Q  185 acaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    ||||||||||||||||  |||||||||||||||||| ||| ||| |||||    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctc 33942179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 41809232 - 41809285
Alignment:
Q  180 tggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    |||||||||||||||||||||  ||||| |||||| ||||  ||||||||||||    
T  41809232 tggaaacaacttatgacatgttcataagttgtttttagcttatttccataagct 41809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 1160655 - 1160711
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 233  Q
    ||||||||||||| ||||||||||| ||||| |||||| || |  ||||||||||||    
T  1160655 ttatggaaacaacctatgacatgtccataagttgtttttagtttatttccataagct 1160711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 1742009 - 1742069
Alignment:
Q  170 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    ||||| |||||||||||||||||||||||||  ||||||| | |||| ||  |||||||||    
T  1742009 ggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataa 1742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 10285439 - 10285399
Alignment:
Q  179 atggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| |||| |||||||||||| |||||||||||||||||    
T  10285439 atggagacaagttatgacatgtccataagctgttttcagct 10285399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 12215894 - 12215854
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  12215894 cttatggaaatagcttatgacatgtccataagctgttttca 12215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 33231930 - 33231991
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| ||||||||||| |||||||||  ||| |||||||||||||||||  ||| |||||||||    
T  33231930 gagagcttatggaaaccacttatgac--gtccataagctgttttcagctgatttgcataagctc 33231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 12682 - 12730
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  12682 gagaccttatggaaacaacttatgacatgtccataagttgttttcagct 12730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 6478 - 6535
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||| ||||||||||||||||| ||||||||| |  |||||||||||||    
T  6478 ttatagaaacaacctatgacatgtctataagttgttttcagtttatttccataagctc 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 13498 - 13555
Alignment:
Q  177 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 234  Q
    |||| |||||||| ||||||||||||||||| ||||||||| |  |||||||||||||    
T  13498 ttatagaaacaacctatgacatgtctataagttgttttcagtttatttccataagctc 13555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 27685 - 27620
Alignment:
Q  154 cttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||| |||||| || ||||| |||||||||| | ||||||||||| ||||||| |||||||||||    
T  27685 cttctgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagct 27620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 306413 - 306370
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    |||||||||||| ||||||||||| | |||||||||||||||||    
T  306413 cttatggaaacagcttatgacatgcccataagctgttttcagct 306370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 10600 - 10654
Alignment:
Q  176 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 230  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||  |||||||||    
T  10600 cttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataa 10654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 68960 - 69002
Alignment:
Q  174 aacttatggaaacaacttatgacatgtctataagctgttttca 216  Q
    |||||||| ||||| | ||||||||||||||||||||||||||    
T  68960 aacttatgaaaacagcgtatgacatgtctataagctgttttca 69002  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 9615 - 9663
Alignment:
Q  171 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 219  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||| ||||    
T  9615 gagaacttatgaaaacaacttattacatgttcataagctgtttttagct 9663  T

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