View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18191_low_9 (Length: 255)
Name: NF18191_low_9
Description: NF18191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18191_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 48680912 - 48681156
Alignment:
| Q |
1 |
agaaagaaagaaaacgnnnnnnnctatatcaaaacatctgacttatgctacataaccaaatttaacagacttaaattcaaacaggcaagaaaattactat |
100 |
Q |
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| T |
48680912 |
agaaagaaagaaaacgaaaaaaactatatcaaaacatctgacttatgctacataaccaaatttaacagacttaaattcaaacaggcaagaaaattactat |
48681011 |
T |
|
| Q |
101 |
tcaattgtatataaagaagttcacagtgaattacatgtataattaccctactaaagaatgaaataacagcgaagtatgttttctgatcttgttactttct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |
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| T |
48681012 |
tcaattgtatataaagaagttcacagtgaattacatgtataattaccctactaaagaatgaaataacagcgaattatattttctgatcttgttacttttt |
48681111 |
T |
|
| Q |
201 |
gtgtgtaaaactaaggtgagacgtaattgaattttaccccctatg |
245 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
48681112 |
gtgtgtaaaactaaggtgagacgtaattgaactttaccccctatg |
48681156 |
T |
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