View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18192_high_16 (Length: 238)
Name: NF18192_high_16
Description: NF18192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18192_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 50424261 - 50424482
Alignment:
| Q |
1 |
aaaatgtatgtttgttcgagcatttaaaggttggtctcagcataacatgttggtgcatgagggagaagctattacgttgttgaatgccatgaattgggtg |
100 |
Q |
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| T |
50424261 |
aaaatgtatgtttgttcgagcatttaaaggttggtctcagcataacatgttggtgcatgagggagaagctattacgttgttgaatgccatgaattgggtg |
50424360 |
T |
|
| Q |
101 |
caaaaaatgggattgcaacgtgtgatgtttctaagtgactcataggttcttatagatgtcgtgtgtgctaatagagatggtttgatgtattaaatgtcat |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
50424361 |
caaaaaatgggattgcaacgtgtgatgtttccaagtgactcataggttcttatagatgtcgtgtgtgctaatagagatggtttgatgtatttaatgtcat |
50424460 |
T |
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| Q |
201 |
tgttgacaacattgggcatatt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
50424461 |
tgttgacaacattgggcatatt |
50424482 |
T |
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