View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18195_high_7 (Length: 551)

Name: NF18195_high_7
Description: NF18195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18195_high_7
NF18195_high_7
[»] chr2 (25 HSPs)
chr2 (118-530)||(32802181-32802593)
chr2 (1-117)||(9296576-9296691)
chr2 (1-117)||(11099102-11099217)
chr2 (1-117)||(14291295-14291410)
chr2 (1-117)||(25403443-25403556)
chr2 (1-117)||(3491563-3491676)
chr2 (1-117)||(25398305-25398418)
chr2 (12-96)||(44312798-44312885)
chr2 (11-96)||(19344243-19344332)
chr2 (11-96)||(19349101-19349190)
chr2 (11-96)||(32246607-32246696)
chr2 (2-96)||(39812153-39812250)
chr2 (2-95)||(34682509-34682600)
chr2 (10-117)||(10445628-10445732)
chr2 (10-117)||(23078655-23078759)
chr2 (8-117)||(42039850-42039956)
chr2 (2-96)||(8039890-8039982)
chr2 (63-117)||(16940442-16940496)
chr2 (63-117)||(17011107-17011161)
chr2 (63-96)||(28259410-28259443)
chr2 (66-117)||(13569137-13569189)
chr2 (48-102)||(10707472-10707525)
chr2 (63-101)||(36757994-36758032)
chr2 (63-96)||(32178425-32178458)
chr2 (66-117)||(8390389-8390441)
[»] chr5 (33 HSPs)
chr5 (193-531)||(31783958-31784296)
chr5 (12-117)||(1457336-1457445)
chr5 (14-118)||(27444770-27444878)
chr5 (1-118)||(24135658-24135772)
chr5 (14-117)||(27449615-27449722)
chr5 (12-119)||(43592078-43592189)
chr5 (12-117)||(43598525-43598634)
chr5 (12-117)||(43604017-43604126)
chr5 (12-117)||(43609509-43609618)
chr5 (1-118)||(38191982-38192096)
chr5 (1-118)||(38219207-38219321)
chr5 (1-117)||(35387474-35387587)
chr5 (54-117)||(31180079-31180142)
chr5 (1-103)||(30631224-30631327)
chr5 (1-96)||(15044512-15044607)
chr5 (1-117)||(15464343-15464456)
chr5 (11-80)||(37556797-37556867)
chr5 (11-80)||(37561619-37561689)
chr5 (2-96)||(17004134-17004226)
chr5 (1-117)||(14520039-14520152)
chr5 (11-76)||(2785221-2785287)
chr5 (12-96)||(28807749-28807837)
chr5 (11-76)||(31397166-31397232)
chr5 (11-76)||(31402023-31402089)
chr5 (11-76)||(33791162-33791228)
chr5 (63-117)||(42126640-42126693)
chr5 (62-119)||(213789-213846)
chr5 (48-96)||(3880133-3880181)
chr5 (10-117)||(19588557-19588660)
chr5 (10-96)||(11182017-11182100)
chr5 (11-76)||(33768025-33768091)
chr5 (11-117)||(42127593-42127695)
chr5 (63-96)||(10281693-10281726)
[»] chr8 (29 HSPs)
chr8 (131-489)||(37391664-37392008)
chr8 (1-118)||(36979183-36979299)
chr8 (1-117)||(4760251-4760366)
chr8 (1-119)||(10689318-10689435)
chr8 (1-117)||(18853343-18853457)
chr8 (16-117)||(18870749-18870849)
chr8 (1-117)||(30655448-30655563)
chr8 (12-117)||(6311100-6311208)
chr8 (1-117)||(1262125-1262238)
chr8 (1-117)||(33037981-33038096)
chr8 (12-117)||(7290101-7290210)
chr8 (1-117)||(26287713-26287826)
chr8 (1-117)||(26312964-26313077)
chr8 (1-117)||(31071402-31071516)
chr8 (2-96)||(39784989-39785086)
chr8 (11-80)||(10684437-10684508)
chr8 (2-117)||(26300958-26301070)
chr8 (48-117)||(19752612-19752681)
chr8 (63-117)||(19175990-19176044)
chr8 (11-76)||(25328451-25328517)
chr8 (11-76)||(35745237-35745303)
chr8 (63-96)||(7412168-7412201)
chr8 (48-96)||(6127049-6127097)
chr8 (1-96)||(5702657-5702749)
chr8 (48-95)||(26403449-26403496)
chr8 (63-117)||(4455838-4455892)
chr8 (63-117)||(28307368-28307420)
chr8 (63-96)||(9766053-9766086)
chr8 (64-117)||(10015389-10015443)
[»] scaffold0248 (1 HSPs)
scaffold0248 (118-303)||(3583-3768)
[»] chr1 (27 HSPs)
chr1 (118-303)||(1537454-1537639)
chr1 (118-303)||(17767501-17767686)
chr1 (2-117)||(24202942-24203054)
chr1 (10-117)||(19359028-19359132)
chr1 (1-84)||(24787539-24787625)
chr1 (44-117)||(19361650-19361722)
chr1 (44-117)||(19380290-19380362)
chr1 (2-75)||(41398084-41398160)
chr1 (48-96)||(27104587-27104635)
chr1 (63-102)||(21536802-21536841)
chr1 (12-96)||(25445264-25445352)
chr1 (63-117)||(29651620-29651674)
chr1 (63-96)||(37069599-37069632)
chr1 (21-96)||(41386571-41386650)
chr1 (48-96)||(9024049-9024096)
chr1 (1-113)||(16124691-16124799)
chr1 (2-117)||(775483-775594)
chr1 (71-118)||(3281519-3281566)
chr1 (10-117)||(40816916-40817020)
chr1 (12-96)||(39445322-39445410)
chr1 (11-76)||(43988639-43988705)
chr1 (12-96)||(44024047-44024135)
chr1 (63-96)||(9476093-9476126)
chr1 (63-96)||(26645130-26645163)
chr1 (48-117)||(32889249-32889317)
chr1 (63-96)||(47099056-47099089)
chr1 (48-96)||(47704156-47704204)
[»] scaffold0007 (1 HSPs)
scaffold0007 (118-301)||(273073-273256)
[»] chr3 (35 HSPs)
chr3 (1-117)||(2671761-2671876)
chr3 (1-117)||(7167051-7167165)
chr3 (1-117)||(8739239-8739354)
chr3 (1-117)||(9091477-9091592)
chr3 (10-117)||(40372979-40373085)
chr3 (1-96)||(22173359-22173456)
chr3 (11-117)||(28504040-28504145)
chr3 (1-117)||(8477171-8477286)
chr3 (1-117)||(1305761-1305874)
chr3 (2-96)||(18656256-18656351)
chr3 (1-117)||(32143133-32143246)
chr3 (1-115)||(1309668-1309779)
chr3 (1-119)||(30709955-30710070)
chr3 (1-101)||(36028931-36029028)
chr3 (63-117)||(27026754-27026809)
chr3 (11-80)||(32475326-32475397)
chr3 (11-80)||(32480184-32480255)
chr3 (11-76)||(2677261-2677327)
chr3 (11-76)||(10207779-10207845)
chr3 (63-117)||(27038100-27038154)
chr3 (63-96)||(1417712-1417745)
chr3 (7-96)||(3716172-3716259)
chr3 (1-117)||(35925292-35925405)
chr3 (8-96)||(16264180-16264265)
chr3 (49-117)||(18554497-18554563)
chr3 (11-76)||(2673105-2673171)
chr3 (63-117)||(6794935-6794988)
chr3 (11-76)||(8512061-8512127)
chr3 (11-76)||(8516941-8517007)
chr3 (11-72)||(24967957-24968019)
chr3 (10-96)||(47649571-47649655)
chr3 (63-96)||(3323786-3323819)
chr3 (44-121)||(27986649-27986724)
chr3 (44-100)||(27452786-27452841)
chr3 (67-122)||(39040218-39040274)
[»] chr7 (29 HSPs)
chr7 (1-120)||(20357722-20357840)
chr7 (1-117)||(2057765-2057881)
chr7 (1-117)||(21645818-21645931)
chr7 (311-443)||(32595826-32595958)
chr7 (11-117)||(4866528-4866641)
chr7 (12-117)||(12396710-12396822)
chr7 (1-119)||(21639618-21639733)
chr7 (325-443)||(32600431-32600549)
chr7 (4-117)||(1533620-1533730)
chr7 (12-96)||(12406155-12406242)
chr7 (11-96)||(24024501-24024589)
chr7 (1-117)||(18413453-18413566)
chr7 (12-96)||(21812413-21812501)
chr7 (5-117)||(18408576-18408685)
chr7 (11-117)||(9190191-9190294)
chr7 (2-96)||(31109748-31109844)
chr7 (1-117)||(49091472-49091585)
chr7 (11-80)||(16879914-16879985)
chr7 (11-80)||(16884770-16884841)
chr7 (11-80)||(24261496-24261567)
chr7 (11-80)||(24266375-24266446)
chr7 (11-117)||(9185346-9185449)
chr7 (1-121)||(2479144-2479262)
chr7 (63-118)||(35960622-35960678)
chr7 (2-96)||(29159633-29159725)
chr7 (10-96)||(44848868-44848951)
chr7 (63-117)||(46516544-46516597)
chr7 (63-96)||(4796903-4796936)
chr7 (63-96)||(47263511-47263544)
[»] chr6 (20 HSPs)
chr6 (1-117)||(30125969-30126084)
chr6 (1-117)||(5674943-5675057)
chr6 (1-96)||(11856795-11856892)
chr6 (12-96)||(22010871-22010958)
chr6 (1-96)||(14737741-14737838)
chr6 (11-117)||(31936398-31936501)
chr6 (1-96)||(14742600-14742697)
chr6 (7-120)||(31086642-31086752)
chr6 (12-96)||(6438324-6438411)
chr6 (1-117)||(22708829-22708942)
chr6 (11-83)||(28155744-28155817)
chr6 (1-96)||(28184325-28184425)
chr6 (1-96)||(21355869-21355961)
chr6 (11-76)||(5343326-5343392)
chr6 (2-96)||(5757651-5757742)
chr6 (11-76)||(6005263-6005329)
chr6 (11-76)||(33330620-33330686)
chr6 (63-119)||(5572829-5572884)
chr6 (63-117)||(5017705-5017759)
chr6 (11-76)||(33336117-33336183)
[»] chr4 (26 HSPs)
chr4 (160-304)||(23911043-23911187)
chr4 (1-117)||(24741748-24741862)
chr4 (11-121)||(29760445-29760554)
chr4 (12-117)||(51520258-51520367)
chr4 (1-96)||(9224571-9224668)
chr4 (1-96)||(9229358-9229455)
chr4 (12-117)||(56146886-56146995)
chr4 (1-117)||(28468700-28468813)
chr4 (11-96)||(45347991-45348079)
chr4 (11-96)||(45357470-45357558)
chr4 (2-96)||(5732486-5732581)
chr4 (11-96)||(3813846-3813935)
chr4 (1-117)||(16624183-16624297)
chr4 (2-118)||(25862197-25862309)
chr4 (10-117)||(31985815-31985919)
chr4 (12-96)||(18855549-18855637)
chr4 (48-96)||(24333641-24333689)
chr4 (66-117)||(8689714-8689765)
chr4 (63-106)||(16630913-16630956)
chr4 (10-96)||(3796704-3796788)
chr4 (67-117)||(5397069-5397119)
chr4 (63-117)||(34496056-34496108)
chr4 (63-117)||(38152673-38152727)
chr4 (10-96)||(54867013-54867096)
chr4 (1-85)||(5396848-5396929)
chr4 (63-119)||(10047188-10047243)
[»] scaffold0978 (1 HSPs)
scaffold0978 (2-117)||(412-527)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-96)||(35226-35323)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-118)||(24217-24332)
scaffold0188 (1-117)||(18124-18238)
[»] scaffold0355 (1 HSPs)
scaffold0355 (2-96)||(9805-9902)
[»] scaffold0197 (2 HSPs)
scaffold0197 (11-80)||(14482-14553)
scaffold0197 (11-76)||(19338-19404)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-80)||(182137-182208)
[»] scaffold0087 (2 HSPs)
scaffold0087 (2-96)||(44134-44225)
scaffold0087 (1-117)||(37006-37119)
[»] scaffold1805 (1 HSPs)
scaffold1805 (1-117)||(1217-1331)
[»] scaffold0184 (1 HSPs)
scaffold0184 (42-117)||(29703-29777)
[»] scaffold0078 (1 HSPs)
scaffold0078 (42-117)||(43067-43141)
[»] scaffold0464 (1 HSPs)
scaffold0464 (12-96)||(185-273)
[»] scaffold0036 (1 HSPs)
scaffold0036 (63-117)||(85495-85549)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-76)||(149129-149195)
[»] scaffold0127 (1 HSPs)
scaffold0127 (21-96)||(34132-34211)
[»] scaffold0148 (1 HSPs)
scaffold0148 (63-96)||(10558-10591)


Alignment Details
Target: chr2 (Bit Score: 345; Significance: 0; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 118 - 530
Target Start/End: Complemental strand, 32802593 - 32802181
Alignment:
Q  118 cataatatagtacaaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaa 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32802593 cataatatactacaaatcaagccaatgatttggcaagcaagaatagtacggctaacagaataattggcaagcaagaaaacaatcaaaattatgtgaacaa 32802494  T
Q  218 gttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctaccaaaacaaacttcaagta 317  Q
    | |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  32802493 ggtcatgaaatgtaactatctcaaaggtacttagaaaaataagcttctgttatataaaagaaacaagctactaaagagctaccaaaacaaacttcgagta 32802394  T
Q  318 cacaattcacaattattgtactacattcactacacaattattgatttgttgtaaggaactaattttccaatgcacgtttagcattctccaacgctgtctt 417  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32802393 cacaattcacaattattctacttcattcactacacaattattgagttgttgaaaggaactaattttccaatgcacgtttagcattctccaacgctgtctt 32802294  T
Q  418 ggctgcaatttgctttgtgtctctcttgacagtttttattcttgttgtttctacttctcgagttttatcttttacggttatgtcaacctccaacattatt 517  Q
    ||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32802293 ggctgaaatttgctttgtgtctctctctacagtttttatccttgttgtttctacttctcgagttttatcttttacggttatgtcaacctccaacattttt 32802194  T
Q  518 tttatgtcatcaa 530  Q
    |||||||||||||    
T  32802193 tttatgtcatcaa 32802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9296576 - 9296691
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  9296576 ctagggctgtttttgttgttgtttgcttggaaaccattttgctcatagattaccactaccttttgctccacacatctttg-ttttcattggtgtgagttt 9296674  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  9296675 taaccggattcacaaca 9296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11099102 - 11099217
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11099102 ctagggctgtttttgttgttgtt-gcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 11099200  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  11099201 caaccggattcacaaca 11099217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14291410 - 14291295
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14291410 ctagggctgtttttgttgttgtttgcttggaaaccattttgcccattgattaccactatctcttgctccacacacctttg-ttttcattggtgtgagttt 14291312  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  14291311 taaccggattcacaaca 14291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25403556 - 25403443
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||  |||||||||||||||    
T  25403556 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttgttta-cattggtgtgagttt 25403460  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  25403459 caaccggattcacaaca 25403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3491676 - 3491563
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  3491676 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 3491580  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  3491579 tatccgaattcacaaca 3491563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25398418 - 25398305
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  25398418 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 25398322  T
Q  101 taaccggattcacaaca 117  Q
     |||| |||||||||||    
T  25398321 caaccagattcacaaca 25398305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 44312798 - 44312885
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  44312798 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 44312885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19344332 - 19344243
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||   | ||||||||||||||    
T  19344332 ttttgttgttgttagcttggaggccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19349190 - 19349101
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||   | ||||||||||||||    
T  19349190 ttttgttgttgttagcttggaggccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 19349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 32246696 - 32246607
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| |||   | ||||||||||||||    
T  32246696 ttttgttgttgttagcttggagaccatttgttctcatagattaccactatcacttgctccacacatcattggtttatttcattggtgtga 32246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 39812153 - 39812250
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    |||||||||||| ||||||||| ||||||||||||||||  ||||| ||||| ||||||| |||||||||||||||||||   | ||||||||||||||    
T  39812153 tagggctgtttt-gttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 34682509 - 34682600
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtg 95  Q
    |||| ||||||||||||||||| ||||||||||  |||  || || |||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  34682509 taggtctgtttttgttgttgtt-gcttggagacactttatct-attgattaccactttcttttgctccacacatctttgttattcattggtgtg 34682600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 10445628 - 10445732
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||||||||||| ||||  ||| ||    
T  10445628 tttttgttgttgtt-gcttggagacactttatc-cattgattaccacttccttttgctccacacatctttgtttttcattggtgtga-ttttgtccgaat 10445724  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  10445725 tcacaaca 10445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 23078655 - 23078759
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||||||||||| ||||| | | ||    
T  23078655 tttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgtttttcattggtgtgatttttaccggaat 23078751  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  23078752 tcacaaca 23078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 42039850 - 42039956
Alignment:
Q  8 tgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccgg 107  Q
    |||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||| ||||||||||||| ||||| | |     
T  42039850 tgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgttattcattggtgtgatttttaccgga 42039946  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  42039947 attcacaaca 42039956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 8039982 - 8039890
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||| ||||||||||||||||| ||||| ||||  |||  || || ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  8039982 taggtctgtttttgttgttgtt-gcttgaagacactttatct-attgattaccacttccttttgctccacacatctttgttattcattggtgtga 8039890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 16940442 - 16940496
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| |||  |||| ||||||||||    
T  16940442 ttgctccacacatctttgttattcattggtgtgattttgtaccgaattcacaaca 16940496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 17011107 - 17011161
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| |||  |||| ||||||||||    
T  17011107 ttgctccacacatctttgttattcattggtgtgattttgtaccgaattcacaaca 17011161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 28259410 - 28259443
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||||||    
T  28259410 ttgctccacacatctttgtttttcattggtgtga 28259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 13569189 - 13569137
Alignment:
Q  66 ctccacacatctttgtttttcattggtgtgagttttaaccgg-attcacaaca 117  Q
    ||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||    
T  13569189 ctccacacatctttgttattcattggtgtgattttttaccggaattcacaaca 13569137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 10707472 - 10707525
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttta 102  Q
    |||||||||| ||| |||||||||||||||||||| ||||| ||||||| |||||    
T  10707472 gattaccact-tcttttgctccacacatctttgttattcatgggtgtgattttta 10707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 36757994 - 36758032
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagtttt 101  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  36757994 ttgctccacacatctttgttattcattggtgtgattttt 36758032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 32178458 - 32178425
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  32178458 ttgctccacacatctttgttattcattggtgtga 32178425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 8390389 - 8390441
Alignment:
Q  66 ctccacacatctttgtttttcattggtgtgagttttaaccgg-attcacaaca 117  Q
    |||||||||||||| |||||||||||||||| |||  ||||| ||||||||||    
T  8390389 ctccacacatctttatttttcattggtgtgattttgtaccggaattcacaaca 8390441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 193 - 531
Target Start/End: Original strand, 31783958 - 31784296
Alignment:
Q  193 aaaacaatcaaaattatgtgaacaagttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaa 292  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  31783958 aaaataatcaaaattatgtgaacaaggtcatgaaatgtaactatctcaaaggtacttggaaaaataagcttctgttatgtaaaagaaacaagcttctaaa 31784057  T
Q  293 gagctaccaaaacaaacttcaagtacacaattcacaattattgtactacattcactacacaattattgatttgttgtaaggaactaattttccaatgcac 392  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31784058 gagctaccaaaacaaacttcaagtacacaattcacgattattctactacaatcactacacaattattgagttgttgtaaggaactaattttccaatgcac 31784157  T
Q  393 gtttagcattctccaacgctgtcttggctgcaatttgctttgtgtctctcttgacagtttttattcttgttgtttctacttctcgagttttatcttttac 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| |    
T  31784158 gtttagcattctccaacgctgtcttggctgcaatttgctttgtgtctctctgtacagtttttatccttgttgtttctacttctcgagttttatctttttc 31784257  T
Q  493 ggttatgtcaacctccaacattatttttatgtcatcaag 531  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  31784258 ggttatgtcaacctccaacattttttttatgtcgtcaag 31784296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 1457336 - 1457445
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||  ||||||    
T  1457336 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccgg 1457435  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  1457436 attcacaaca 1457445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 27444878 - 27444770
Alignment:
Q  14 tgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccggat 109  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||  ||||||||    
T  27444878 tgttgttgtttgcttggagaccatttgtactcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccggat 27444779  T
Q  110 tcacaacac 118  Q
    |||||||||    
T  27444778 tcacaacac 27444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24135772 - 24135658
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||| ||||||||||||||||||||  |||  ||||||||||||||||  || ||||||||||||||||| |||| |||||||||||||||    
T  24135772 ctagggctgtttt-gttgttgtttgcttggagactcttta-ctcatagattaccactcccttttgctccacacatctttatttt-cattggtgtgagttt 24135676  T
Q  101 taaccggattcacaacac 118  Q
    || |||||||||||||||    
T  24135675 tatccggattcacaacac 24135658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 27449722 - 27449615
Alignment:
Q  14 tgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccggat 109  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||  ||||||||    
T  27449722 tgttgttgtttgcttggagaccatttgtactcattgattaccactatctcttgctccacatatcattgtttatttcattggtgtgagtttggaaccggat 27449623  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  27449622 tcacaaca 27449615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 43592189 - 43592078
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||| |||  ||||||    
T  43592189 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattgatgtgactttggaaccgg 43592090  T
Q  108 attcacaacaca 119  Q
    ||||||||||||    
T  43592089 attcacaacaca 43592078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 43598634 - 43598525
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||  ||||||    
T  43598634 tttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccgg 43598535  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  43598534 attcacaaca 43598525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 43604126 - 43604017
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||  ||||||    
T  43604126 tttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccgg 43604027  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  43604026 attcacaaca 43604017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 43609618 - 43609509
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||  ||||||    
T  43609618 tttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgactttggaaccgg 43609519  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  43609518 attcacaaca 43609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38192096 - 38191982
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||  |||||||||||||||    
T  38192096 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttgttta-cattggtgtgagttt 38192000  T
Q  101 taaccggattcacaacac 118  Q
     |||||||||||||||||    
T  38191999 caaccggattcacaacac 38191982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38219321 - 38219207
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||  |||||||||||||||    
T  38219321 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttgttta-cattggtgtgagttt 38219225  T
Q  101 taaccggattcacaacac 118  Q
     |||||||||||||||||    
T  38219224 caaccggattcacaacac 38219207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35387587 - 35387474
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    |||||| |||||||||||||||| ||||||||||  |||  | ||||||||| ||||  || |||||||||||||||||||||  |||||||||||||||    
T  35387587 ctagggttgtttttgttgttgtt-gcttggagacacttta-cacatagattatcacttccttttgctccacacatctttgttta-cattggtgtgagttt 35387491  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  35387490 taaccggattcacaaca 35387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 31180142 - 31180079
Alignment:
Q  54 cactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  31180142 cactatctcttgctccacacatcattgttattcattggtgtgagtttcaaccggattcacaaca 31180079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30631327 - 30631224
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgag 97  Q
    ||||||||||||| ||||||||| ||||| | ||||||||  ||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||    
T  30631327 ctagggctgtttt-gttgttgtt-gcttgaaaaccatttgttctcatagattaccactatctcttgctccacacatcattgtttatttcatttgtgtgag 30631230  T
Q  98 ttttaa 103  Q
    ||||||    
T  30631229 ttttaa 30631224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15044607 - 15044512
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||| ||||||||| | ||||||||||||||  ||||| ||||||||||||| ||||||| |||| || |||| ||||||||||||||    
T  15044607 ctagggctgtttt-gttgttgttggtttggagaccatttgttctcattgattaccactatcacttgctctacacgtcattgtatttcattggtgtga 15044512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15464456 - 15464343
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||  |||||||||||||||    
T  15464456 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttccttttgctccacacatctttgttta-cattggtgtgagttt 15464360  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  15464359 tatccgaattcacaaca 15464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 37556797 - 37556867
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| ||||||| |||||||||||||||||||    
T  37556797 ttttgttgttgttagcttggaggccatttgctctcatagattatcactatcacttgctccacacatctttg 37556867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 37561619 - 37561689
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| ||||||| |||||||||||||||||||    
T  37561619 ttttgttgttgttagcttggaggccatttgctctcatagattatcactatcacttgctccacacatctttg 37561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 17004134 - 17004226
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||| ||||||||||||||||| ||||||||||  |||  || || ||||||||||  || ||||||||||| ||||||||||||||||||||||    
T  17004134 taggtctgtttttgttgttgtt-gcttggagacactttatct-attgattaccacttccttttgctccacacctctttgtttttcattggtgtga 17004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14520152 - 14520039
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||| ||||||||||||| |||    
T  14520152 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgttattcattggtgtga-ttt 14520057  T
Q  101 taaccgg-attcacaaca 117  Q
    | ||||| ||||||||||    
T  14520056 tcaccggaattcacaaca 14520039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 2785287 - 2785221
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  2785287 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 2785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 28807749 - 28807837
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  28807749 tttgttgttgtttgcttggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 28807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 31397166 - 31397232
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  31397166 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 31397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 31402023 - 31402089
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  31402023 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 31402089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 33791228 - 33791162
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  33791228 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 33791162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 42126640 - 42126693
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||    
T  42126640 ttgctccacacatctttgttattcattggtgtga-ttttatccgaattcacaaca 42126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 213789 - 213846
Alignment:
Q  62 cttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaacaca 119  Q
    ||||||| ||||||||||||| ||||||||||||| ||||| | | ||||||||||||    
T  213789 cttgctctacacatctttgttattcattggtgtgatttttaccggaattcacaacaca 213846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 3880181 - 3880133
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  3880181 gattaccacttccttttgctccacacatctttgttattcattggtgtga 3880133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 19588660 - 19588557
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| ||||||||||||| ||||  ||| ||    
T  19588660 tttttgttgttgtt-gcttggagacgctttatct-attgattaccacttcct-ttgctccacacatctttgttattcattggtgtga-ttttgtccgaat 19588565  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  19588564 tcacaaca 19588557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 11182017 - 11182100
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  11182017 tttttgttgttgtt-gcttggagacactttatct-attgattaccacttact-ttgctccacacatctttgttattcattggtgtga 11182100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 33768091 - 33768025
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| ||||||||  ||||||  ||||||||||| | ||||| |||||||||||||||    
T  33768091 ttttgttgttgttagcttggaggtcatttgcactcatagattatctctatcacttgctccacacatc 33768025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 42127593 - 42127695
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||||||  |||  | ||| |||||||||| ||| |||||||||||||||||||| |||||| |||||| ||||  ||| |||    
T  42127593 ttttgttgttgtt-gcttggagacactttatc-cattgattaccactttct-ttgctccacacatctttgttattcattagtgtga-ttttgtccgaatt 42127688  T
Q  111 cacaaca 117  Q
    |||||||    
T  42127689 cacaaca 42127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 10281726 - 10281693
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  10281726 ttgctccacacatctttgttattcattggtgtga 10281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 1e-98; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 131 - 489
Target Start/End: Complemental strand, 37392008 - 37391664
Alignment:
Q  131 aaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaagttcatgaaatgt 230  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||| ||||    
T  37392008 aaatcaagtcaatgatttggcaagcaagaatagtacagccaacagaataactggcaagcaagaaaacaatcaaaattatgtaaacaagatcatgacatgt 37391909  T
Q  231 aactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctaccaaaacaaacttcaagtacacaattcacaat 330  Q
    |||||||||||||| |||| ||||| |||| |||| |||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||| |    
T  37391908 aactatctcaaaggaacttagaaaaataaggttctattatataaaagaaacatgcttcaaaagagctaccaaaacaaaatacaagtacacaattcacagt 37391809  T
Q  331 tattgtactacattcactacacaattattgatttgttgtaaggaactaattttccaatgcacgtttagcattctccaacgctgtcttggctgcaatttgc 430  Q
    ||||   ||||||           ||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| | |||| || ||||||||||     
T  37391808 tatt---ctacat-----------ttattgagttgttgtaaggaaataattttccaatgcacgttaagcattctccaatgttgtcctgactgcaatttga 37391723  T
Q  431 tttgtgtctctcttgacagtttttattcttgttgtttctacttctcgagttttatcttt 489  Q
    |||||||| ||||  ||| ||||||| ||||||| ||||||||||||||||||||||||    
T  37391722 tttgtgtcgctctctacaatttttatccttgttgcttctacttctcgagttttatcttt 37391664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36979299 - 36979183
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979299 ctagggctgtttttgttgttgtt-gcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 36979201  T
Q  101 taaccggattcacaacac 118  Q
     |||||||||||||||||    
T  36979200 caaccggattcacaacac 36979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4760251 - 4760366
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4760251 ctagggctgtttttgttgttgtt-gcttggaaaccattttgctcattgattaccactatctctagctccacacatctttgtttttcattgatgtgagttt 4760349  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  4760350 caaccggattcacaaca 4760366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 10689318 - 10689435
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    |||||| |||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10689318 ctagggttgtttttgttgttgtt-gcttggaaaccattagactcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 10689416  T
Q  101 taaccggattcacaacaca 119  Q
     ||||| |  |||||||||    
T  10689417 caaccgaaaacacaacaca 10689435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18853343 - 18853457
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    |||||||  ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  18853343 ctagggcgtttttttttgttgtttgcttggaaaccatttgactcatagattaccactatctcttgctccacacatctttg--tttcgttggtgtgagttt 18853440  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  18853441 caaccggattcacaaca 18853457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 18870749 - 18870849
Alignment:
Q  16 ttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaa 115  Q
    |||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18870749 ttgttgtttgcttggaaaccatttaactcatagattaccattatctcttgctccacacatctttg-ttttcattggtgtgagtttcaaccggattcacaa 18870847  T
Q  116 ca 117  Q
    ||    
T  18870848 ca 18870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30655563 - 30655448
Alignment:
Q  1 ctagggctgttttt-gttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtt 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30655563 ctagggctgttttttgttgttgtt-gcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttg-ttttcattggtgtgagtt 30655466  T
Q  100 ttaaccggattcacaaca 117  Q
    | ||||||||||||||||    
T  30655465 tcaaccggattcacaaca 30655448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 6311208 - 6311100
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgttt--ttcattggtgtgagttttaaccgga 108  Q
    |||||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  6311208 tttgttgttgtttgcttggaaaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtgagtttcaaccgga 6311109  T
Q  109 ttcacaaca 117  Q
    |||||||||    
T  6311108 ttcacaaca 6311100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1262125 - 1262238
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  ||||||||||||||||  || || ||||||||||||||||||| |||||||||||||||    
T  1262125 ctagggctgtttttgttgttgtt-gcttggagacacttta-ctcatagattaccactcccttttactccacacatctttgtttt-cattggtgtgagttt 1262221  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  1262222 taaccggattcacaaca 1262238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33037981 - 33038096
Alignment:
Q  1 ctagggctgttt-ttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtt 99  Q
    |||||||||||| ||||||||||| ||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||| || |    
T  33037981 ctagggctgtttattgttgttgtt-gcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttg-ttttcattggtgttagat 33038078  T
Q  100 ttaaccggattcacaaca 117  Q
    ||||||| || |||||||    
T  33038079 ttaaccgcatccacaaca 33038096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 7290101 - 7290210
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||||||||||||  ||||  ||||||||||||||||||  ||||||    
T  7290101 tttgttgttgtttgtttggagaccatttgttctcattgattaccactatctcttgctccacacatcaatgtttatttcattggtgtgagtttggaaccgg 7290200  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  7290201 attcacaaca 7290210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26287826 - 26287713
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  26287826 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 26287730  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  26287729 tatccgaattcacaaca 26287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26313077 - 26312964
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  26313077 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 26312981  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  26312980 tatccgaattcacaaca 26312964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31071402 - 31071516
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgag-tt 99  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||| ||    
T  31071402 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 31071498  T
Q  100 ttaaccggattcacaaca 117  Q
    ||| ||| ||||||||||    
T  31071499 ttatccgaattcacaaca 31071516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 39784989 - 39785086
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    |||||||||||| |||||| || ||||||||||||||||  ||||| ||||| ||||||| |||||||||||||||||||   | ||||||||||||||    
T  39784989 tagggctgtttt-gttgttattggcttggagaccatttgttctcattgattatcactatcacttgctccacacatctttggtttatttcattggtgtga 39785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 10684437 - 10684508
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  10684437 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 10684508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 26301070 - 26300958
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttt 101  Q
    |||||||||||||||||||||| |||||  |||  |||  | ||||||||||||||  || ||||||||| |||||||||||  ||||||||||||||||    
T  26301070 tagggctgtttttgttgttgtt-gcttgttgacacttta-cacatagattaccacttccttttgctccacgcatctttgttta-cattggtgtgagtttt 26300974  T
Q  102 aaccggattcacaaca 117  Q
    | ||| ||||||||||    
T  26300973 atccgaattcacaaca 26300958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 19752612 - 19752681
Alignment:
Q  48 gattaccactatctcttgctccacacatctttg-tttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||||  || |||||||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  19752612 gattaccacttccttttgctccacacatctttgttttttcattggtgtga-tttttaccggattcacaaca 19752681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 19175990 - 19176044
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| ||||| | | ||||||||||    
T  19175990 ttgctccacacatctttgttattcattggtgtgatttttaccagaattcacaaca 19176044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 25328451 - 25328517
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||| ||||||| |||||||| ||||||    
T  25328451 ttttgttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctccgcacatc 25328517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 35745303 - 35745237
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  35745303 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 35745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 7412201 - 7412168
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||||||    
T  7412201 ttgctccacacatctttgtttttcattggtgtga 7412168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 6127097 - 6127049
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  6127097 gattaccacttccttttgctccacacatctttgttattcattggtgtga 6127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5702657 - 5702749
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||| ||||||||||||||||| ||| ||||||  |||   |||| |||||||||| ||  |||||||||||||||||||| |||||||||||||    
T  5702657 ctaggtctgtttttgttgttgtt-gctaggagacactttat-tcattgattaccact-tcatttgctccacacatctttgttattcattggtgtga 5702749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 26403449 - 26403496
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtg 95  Q
    ||||||||||  || |||||||||||||||||||| ||||||||||||    
T  26403449 gattaccacttccttttgctccacacatctttgttattcattggtgtg 26403496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 4455892 - 4455838
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||| | ||||||||||||| ||||||  | ||||||||||    
T  4455892 ttgctccacacatctttgatattcattggtgtgatttttaagggaattcacaaca 4455838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 28307420 - 28307368
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||    
T  28307420 ttgctccacacatctttg-ttttcattggtgtga-ttttatccgaattcacaaca 28307368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 9766053 - 9766086
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  9766053 ttgctccacacatctttgttattcattggtgtga 9766086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 10015389 - 10015443
Alignment:
Q  64 tgctccacacatctttgtttttcattggtgtgagttttaa--ccggattcacaaca 117  Q
    ||||||||||||||||| ||||||||||||| ||||||||  ||| ||||||||||    
T  10015389 tgctccacacatctttg-ttttcattggtgtaagttttaaatccgaattcacaaca 10015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 3768 - 3583
Alignment:
Q  118 cataatatagtacaaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaa 217  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  3768 cataatatactacaaaccaagccaatgatttggcaagcaagaactgtacggccatgagaataattggcaagcaagaaaacaatcaaaattatgtgaacaa 3669  T
Q  218 gttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctaccaaa 303  Q
    | |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  3668 ggtcatgaaatgtaaccatctcaaaggtacttagaaaaataagcttctgttatataaaagaaacgggcttctaaagagctaccaaa 3583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 1537639 - 1537454
Alignment:
Q  118 cataatatagtacaaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaa 217  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  1537639 cataatatactacaaaccaagccaatgatttggcaagcaagaactgtacggccatgagaataattggcaagcaagaaaacaatcaaaattatgtgaacaa 1537540  T
Q  218 gttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctaccaaa 303  Q
    | |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  1537539 ggtcatgaaatgtaaccatctcaaaggtacttagaaaaataagcttctgttatataaaagaaacgggcttctaaagagctaccaaa 1537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 118 - 303
Target Start/End: Complemental strand, 17767686 - 17767501
Alignment:
Q  118 cataatatagtacaaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaa 217  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  17767686 cataatatactacaaaccaagccaatgatttggcaagcaagaactgtacggccatgagaataattggcaagcaagaaaacaatcaaaattatgtgaacaa 17767587  T
Q  218 gttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctaccaaa 303  Q
    | |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  17767586 ggtcatgaaatgtaaccatctcaaaggtacttagaaaaataagcttctgttatataaaagaaacgggcttctaaagagctaccaaa 17767501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 24202942 - 24203054
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttt 101  Q
    |||||||||||| ||||||||||||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||| ||||||||||||||||    
T  24202942 tagggctgtttt-gttgttgtttgcttggagacacttta-cacatagattaccactcccttttgctccacacatctttgtttt-cattggtgtgagtttt 24203038  T
Q  102 aaccggattcacaaca 117  Q
    ||||||||||||||||    
T  24203039 aaccggattcacaaca 24203054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 19359028 - 19359132
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||  ||||||||||||||||||||||||    
T  19359028 tttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttgttta-cattggtgtgagttttaaccggat 19359124  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  19359125 tcacaaca 19359132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24787539 - 24787625
Alignment:
Q  1 ctagggctgttttt-gttgttgtt--tgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttt 84  Q
    |||||||||||||| |||||||||  |||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  24787539 ctagggctgttttttgttgttgttgttgcttggaaaccattttgctcatttattaccactatctcttgctccacacatctttgtttt 24787625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 19361650 - 19361722
Alignment:
Q  44 catagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  19361650 catagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttttaaccagattcacaaca 19361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 19380290 - 19380362
Alignment:
Q  44 catagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  19380290 catagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttttaaccagattcacaaca 19380362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 41398160 - 41398084
Alignment:
Q  2 tagggctgtttt--tgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacat 75  Q
    ||||||||||||  |||||||||||||||||||||||| ||  ||||| ||||| ||||||| ||||||||||||||    
T  41398160 tagggctgttttgttgttgttgtttgcttggagaccatatgttctcattgattatcactatcacttgctccacacat 41398084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 27104587 - 27104635
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  27104587 gattaccacttccttttgctccacacatctttgtttttcattggtgtga 27104635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 21536802 - 21536841
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagtttta 102  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  21536802 ttgctccacacatctttgtttttcattggtgtgattttta 21536841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 25445264 - 25445352
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  25445264 tttgttgttgtttgcttggaagccatttgttctcattgattatcactatcgcttgctccacacatcattggtttatttcattggtgtga 25445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 29651674 - 29651620
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| ||||  ||| ||||||||||    
T  29651674 ttgctccacacatctttgttattcattggtgtgatttttgtccgaattcacaaca 29651620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 37069632 - 37069599
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||||||    
T  37069632 ttgctccacacatctttgtttttcattggtgtga 37069599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 41386650 - 41386571
Alignment:
Q  21 gtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  41386650 gtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 41386571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 9024049 - 9024096
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  9024049 gattaccactttctct-gctccacacttctttgtttttcattggtgtga 9024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16124691 - 16124799
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||| || ||||   |||| ||||||||||  || ||||| |||||||||||||| ||||||||||||| |||    
T  16124691 ctaggtctgtttttgttgttgtt-gcttggacac-attttattcattgattaccacttcct-ttgcttcacacatctttgttattcattggtgtga-ttt 16124786  T
Q  101 taaccggattcac 113  Q
    |  ||||||||||    
T  16124787 tgtccggattcac 16124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 775594 - 775483
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttt 101  Q
    |||| ||||||||||||||||| ||||||||||  |||  || || | ||||||||  || |||||||||||||||||||| ||||||||||||| ||||    
T  775594 taggtctgtttttgttgttgtt-gcttggagacactttatct-attggttaccacttcct-ttgctccacacatctttgttattcattggtgtga-tttt 775499  T
Q  102 aaccggattcacaaca 117  Q
      ||| ||||||||||    
T  775498 gtccgaattcacaaca 775483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 3281566 - 3281519
Alignment:
Q  71 cacatctttgtttttcattggtgtgagttttaaccggattcacaacac 118  Q
    |||||||||||| ||||||||||||| ||||||| | |||||||||||    
T  3281566 cacatctttgttattcattggtgtgatttttaacggaattcacaacac 3281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 40816916 - 40817020
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| ||||||||||||  ||||  ||| ||    
T  40816916 tttttgttgttgtt-gcttggagacactttatct-attgattaccacttcct-ttgctccacacatctttgttattcattggtgtgttttttgtccgaat 40817012  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  40817013 tcacaaca 40817020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 39445410 - 39445322
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  | ||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  39445410 tttgttgttgtttgcttggaagccatttgttcacattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 39445322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 43988639 - 43988705
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||  |||||||  ||||||||||| | ||||| |||||||||||||||    
T  43988639 ttttgttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatc 43988705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 44024047 - 44024135
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  ||||| ||||| |||||||  |||||||||||||| |||   | ||||||||||||||    
T  44024047 tttgttgttgtttgcttggaagccatttgttctcattgattatcactatcagttgctccacacatcattggtttatttcattggtgtga 44024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 9476126 - 9476093
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||| |||||||||||||||||||||||||||    
T  9476126 ttgctctacacatctttgtttttcattggtgtga 9476093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 26645130 - 26645163
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  26645130 ttgctccacacatctttgttattcattggtgtga 26645163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 32889317 - 32889249
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||| |||| ||| |||||||||||||||||| ||||||||||| ||| ||||   |||||||||||||    
T  32889317 gattatcactttcttttgctccacacatctttg-ttttcattggtatgatttttgtacggattcacaaca 32889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 47099056 - 47099089
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  47099056 ttgctccacacatctttgttattcattggtgtga 47099089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 47704156 - 47704204
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||  || |||||||||||||||||||| ||||||| |||||    
T  47704156 gattaccacttccttttgctccacacatctttgttattcattgatgtga 47704204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 118 - 301
Target Start/End: Original strand, 273073 - 273256
Alignment:
Q  118 cataatatagtacaaatcaagccaatgatttggcaagcaagaatagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaa 217  Q
    ||||||||| |||||| ||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  273073 cataatatactacaaaccaagccaatgatttggcaagcaagaactgtacggccatgagaataattggcaagcaagaaaacaatcaaaattatgtgaacaa 273172  T
Q  218 gttcatgaaatgtaactatctcaaaggtactttgaaaattaagcttctgttatataaaagaaacaagcttctaaagagctacca 301  Q
    |  ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  273173 gggcatgaaatgtaaccatctcaaaggtacttagaaaaataagcttctgttatataaaagaaacgggcttctaaagagctacca 273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2671761 - 2671876
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2671761 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttg-ttttcattggtgtgagttt 2671859  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  2671860 taaccggattcacaaca 2671876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7167165 - 7167051
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7167165 ctagggctgtttt-gttgttgtt-gcttggaaaccattttgctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 7167068  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  7167067 caaccggattcacaaca 7167051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8739239 - 8739354
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |    
T  8739239 ctagggcggtttttgttgttatttgcttggaaaccatttgactcatagattaccactatttcttgctccacacatctttg-ttttcattggtgtgagtct 8739337  T
Q  101 taaccggattcacaaca 117  Q
     ||||| ||||||||||    
T  8739338 caaccgaattcacaaca 8739354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9091477 - 9091592
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |    
T  9091477 ctagggcggtttttgttgttatttgcttggaaaccatttgactcatagattaccactatttcttgctccacacatctttg-ttttcattggtgtgagtct 9091575  T
Q  101 taaccggattcacaaca 117  Q
     ||||| ||||||||||    
T  9091576 caaccgaattcacaaca 9091592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 40372979 - 40373085
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||| ||||||||||||||| ||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40372979 tttttgatgttgtttgcttggaaaccattttgcccattgattaccactatctcttgctccacacacctttg-ttttcattggtgtgagttttaaccggat 40373077  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  40373078 tcacaaca 40373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22173359 - 22173456
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  22173359 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 22173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 28504040 - 28504145
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||| |||||||  ||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||   ||||||||    
T  28504040 ttttgttgttgtt-gcttggaaaccatttttctcatagattatcactaccttttgctccacacatcattgttattcattggtgtgagttaagaccggatt 28504138  T
Q  111 cacaaca 117  Q
    |||||||    
T  28504139 cacaaca 28504145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8477286 - 8477171
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||| ||||||||||||| ||||||  | | |||  ||| | |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  8477286 ctagggctggttttgttgttgtt-gcttgggaaactttttactctttgattaccactatcttttgctccacacatctttg-ttttcattggtgtgagttt 8477189  T
Q  101 ta-accggattcacaaca 117  Q
    || |||||||||||||||    
T  8477188 tataccggattcacaaca 8477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1305874 - 1305761
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||   | |||||||||||||||||||||  |||||||||||||||    
T  1305874 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttctttttgctccacacatctttgttta-cattggtgtgagttt 1305778  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  1305777 tatccgaattcacaaca 1305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 18656351 - 18656256
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgt-ttttcattggtgtga 96  Q
    |||||||||||| ||||||||| ||||||||||||||||  ||||| ||||||||| ||| ||||||||||||||| |||| |||||||||||||||    
T  18656351 tagggctgtttt-gttgttgttagcttggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtattttcattggtgtga 18656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32143246 - 32143133
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  32143246 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 32143150  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  32143149 tatccgaattcacaaca 32143133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1309779 - 1309668
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||| ||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  1309779 ctagggctgtttttgttgttgtt-gcttgaagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 1309683  T
Q  101 taaccggattcacaa 115  Q
    || ||| ||||||||    
T  1309682 tatccgaattcacaa 1309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30709955 - 30710070
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||| ||||||||||||| |||    
T  30709955 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgttattcattggtgtgatttt 30710051  T
Q  101 taaccggattcacaacaca 119  Q
    || | | ||||||||||||    
T  30710052 taccggaattcacaacaca 30710070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36029028 - 36028931
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| |||||||||| ||  |||||||||||||||||||| ||||||||||||| |||    
T  36029028 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccact-tcatttgctccacacatctttgttattcattggtgtgatttt 36028932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 27026809 - 27026754
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccgg-attcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||    
T  27026809 ttgctccacacatctttgttattcattggtgtgattttttaccggaattcacaaca 27026754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 32475397 - 32475326
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || | |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  32475397 ttttgttgttgattagtttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 32475326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 32480255 - 32480184
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || | |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  32480255 ttttgttgttgattagtttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 32480184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 2677261 - 2677327
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  2677261 ttttgttgttgttagcttggaggccatttgctctcatagattatctctatcacttgctccacacatc 2677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 10207845 - 10207779
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  10207845 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 10207779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 27038154 - 27038100
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||| ||| ||||||||||||| |||| |||| ||||||||||    
T  27038154 ttgctccacacatcttagttattcattggtgtgattttttaccgaattcacaaca 27038100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 1417712 - 1417745
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||||||    
T  1417712 ttgctccacacatctttgtttttcattggtgtga 1417745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 3716172 - 3716259
Alignment:
Q  7 ctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||| ||||| ||||  |||  || || ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  3716172 ctgtttttgttgttgtt-gcttgtagacactttatct-attgattaccacttccttttgctccacacatctttgttattcattggtgtga 3716259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35925405 - 35925292
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| |||||||||||||||||  ||||||||| ||||  | ||| |||||||||   || |||||||||| |||||||||||||||||||||| ||||    
T  35925405 ctaggtctgtttttgttgttgtta-cttggagac-attttacacattgattaccacctgct-ttgctccacatatctttgtttttcattggtgtg-gttt 35925310  T
Q  101 taaccgg-attcacaaca 117  Q
    | ||||| ||||||||||    
T  35925309 ttaccggaattcacaaca 35925292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 16264265 - 16264180
Alignment:
Q  8 tgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||||||||| |||||||||  |||  | ||| |||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  16264265 tgtttttgttgttgttt-cttggagacacttta-cacattgattaccact-tctgttgctccacacgtctttgttattcattggtgtga 16264180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 18554497 - 18554563
Alignment:
Q  49 attaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||  ||| ||||||||||    
T  18554497 attaccactttct-ttgctccacacatctttgttattcattggtgtga-ttttgtccgaattcacaaca 18554563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 2673105 - 2673171
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| ||||||   ||||||||||| | ||||| |||||||||||||||    
T  2673105 ttttgttgttgttagcttggaggccatttactctcatagattatctctatcacttgctccacacatc 2673171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 6794935 - 6794988
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||| ||||||||||||||||||| ||||  ||| ||||||||||    
T  6794935 ttgctccacacatcgttgtttttcattggtgtga-ttttgtccgaattcacaaca 6794988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 8512127 - 8512061
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||  |||||||  ||||||||||| | ||||| |||||||||||||||    
T  8512127 ttttgttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatc 8512061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 8517007 - 8516941
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||  |||||||  ||||||||||| | ||||| |||||||||||||||    
T  8517007 ttttgttgttgttagcttggaagccatttgctctcatagattatctctatcacttgctccacacatc 8516941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 24968019 - 24967957
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccaca 72  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||    
T  24968019 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccaca 24967957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 47649655 - 47649571
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||| ||||||||||  |||  || || ||||||||||  || ||| |||||||||||||||| |||||||||||||    
T  47649655 tttttgttgttgtt-gcttggagacactttatct-attgattaccacttccttttgttccacacatctttgttattcattggtgtga 47649571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 3323786 - 3323819
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  3323786 ttgctccacacatctttgttattcattggtgtga 3323819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 27986649 - 27986724
Alignment:
Q  44 catagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaacacata 121  Q
    ||||||||||||||  || |||||||| ||||||||| ||| |||||||||||| |||  ||| ||||||||||||||    
T  27986649 catagattaccacttccttttgctccatacatctttg-tttacattggtgtgag-tttgtccgaattcacaacacata 27986724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 27452841 - 27452786
Alignment:
Q  44 catagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||  || |||||||||||||||||| ||| ||||||||| |||||    
T  27452841 catagattaccacttccttttgctccacacatctttg-tttacattggtgttagttt 27452786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 39040218 - 39040274
Alignment:
Q  67 tccacacatctttgtttttcattggtgtgagttttaaccgg-attcacaacacataa 122  Q
    ||||||||||||| || || |||||||||| |||| ||||| |||||||||||||||    
T  39040218 tccacacatctttattatttattggtgtgattttttaccggaattcacaacacataa 39040274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20357722 - 20357840
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20357722 ctagggctgtttttgttgttgttagcttggagaccatttggctcatagattaccactatctcttgctccacacatctttg-ttttcattggtgtgagttt 20357820  T
Q  101 taaccggattcacaacacat 120  Q
     |||||||||||||||||||    
T  20357821 caaccggattcacaacacat 20357840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2057881 - 2057765
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2057881 ctagggcggtttttgttgttgtttgcttggaaaccatttgactcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 2057782  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  2057781 caaccggattcacaaca 2057765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21645931 - 21645818
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  ||||||||||||||||  || |||||||||||||||||||||  |||||||||||||||    
T  21645931 ctagggctgtttttgttgttgtt-gcttggagacacttta-ctcatagattaccactcccttttgctccacacatctttgttta-cattggtgtgagttt 21645835  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  21645834 taaccggattcacaaca 21645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 311 - 443
Target Start/End: Original strand, 32595826 - 32595958
Alignment:
Q  311 tcaagtacacaattcacaattattgtactacattcactacacaattattgatttgttgtaaggaactaattttccaatgcacgtttagcattctccaacg 410  Q
    ||||||||||| |||||||||||| |||||||||||||  ||| ||||||| || ||||||   |||| |||||||||||||||||||| |||||||  |    
T  32595826 tcaagtacacagttcacaattattctactacattcactttacagttattgagttattgtaaaccactacttttccaatgcacgtttagccttctccagtg 32595925  T
Q  411 ctgtcttggctgcaatttgctttgtgtctctct 443  Q
    ||||| ||||||||| |||| ||||||||||||    
T  32595926 ctgtcctggctgcaacttgcgttgtgtctctct 32595958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 4866641 - 4866528
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggc-tcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga--gtttt--aa 103  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||  |||||  ||    
T  4866641 ttttgttgttgtttgcttggagaccatttgtcctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaaggtttttgaa 4866542  T
Q  104 ccggattcacaaca 117  Q
    ||||||||||||||    
T  4866541 ccggattcacaaca 4866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 12396822 - 12396710
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga--gtttt--aac 104  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||  |||||  |||    
T  12396822 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaaggtttttgaac 12396723  T
Q  105 cggattcacaaca 117  Q
    |||||||||||||    
T  12396722 cggattcacaaca 12396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21639733 - 21639618
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  ||||||||||||||||  || |||||||||||||||||| ||| ||||| |||||||||    
T  21639733 ctagggctgtttttgttgttgtt-gcttggagacacttta-ctcatagattaccactcccttttgctccacacatctttg-tttacattgatgtgagttt 21639637  T
Q  101 taaccggattcacaacaca 119  Q
    ||| |||||||||||||||    
T  21639636 taatcggattcacaacaca 21639618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 443
Target Start/End: Original strand, 32600431 - 32600549
Alignment:
Q  325 cacaattattgtactacattcactacacaattattgatttgttgtaaggaactaattttccaatgcacgtttagcattctccaacgctgtcttggctgca 424  Q
    |||||||||| |||||||||| ||  ||| ||||||| |||||| |||  ||||||||||||| ||||||||||| |||||||  |||||| ||||||||    
T  32600431 cacaattattctactacattccctttacagttattgagttgttgaaagccactaattttccaacgcacgtttagccttctccagtgctgtcctggctgca 32600530  T
Q  425 atttgctttgtgtctctct 443  Q
    | |||||||||||||||||    
T  32600531 acttgctttgtgtctctct 32600549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 1533620 - 1533730
Alignment:
Q  4 gggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaa 103  Q
    |||||| ||||||||||||| ||||||| ||  |||  ||||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  1533620 gggctggttttgttgttgtt-gcttggaaactttttt-ctcattgattaccactatattttgctccacacatctttgtttt-cattggtgtgagttttaa 1533716  T
Q  104 ccggattcacaaca 117  Q
    ||||||||||||||    
T  1533717 ccggattcacaaca 1533730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 12406242 - 12406155
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  12406242 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 12406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 24024501 - 24024589
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  24024501 ttttgttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 24024589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18413566 - 18413453
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || ||||||| |||||||||||||  |||||||||||||||    
T  18413566 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctcctcacatctttgttta-cattggtgtgagttt 18413470  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  18413469 tatccgaattcacaaca 18413453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 21812413 - 21812501
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    |||||||||||| |||||||  |||||||  |||||||||||||||||||||||||||||||||||||||   | ||||||||||||||    
T  21812413 tttgttgttgttagcttggaagccatttgctctcatagattaccactatctcttgctccacacatctttggtttatttcattggtgtga 21812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 18408685 - 18408576
Alignment:
Q  5 ggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaac 104  Q
    ||||||||||||||||||| || |||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| ||||||||||||||||| |    
T  18408685 ggctgtttttgttgttgtt-gcgtggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttttatc 18408589  T
Q  105 cggattcacaaca 117  Q
    || ||||||||||    
T  18408588 cgaattcacaaca 18408576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 9190191 - 9190294
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||||||||||| |||| |||| |||    
T  9190191 ttttgttgttgtt-gcttggagacacttta-cacattgattaccacttccttttgctccacacatctttgtttttcattggtgtga-ttttgaccgaatt 9190287  T
Q  111 cacaaca 117  Q
    |||||||    
T  9190288 cacaaca 9190294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 31109748 - 31109844
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    |||||||||||| ||||||||| ||||||||||||||||  ||||| ||||| ||||||| |||||| |||||||| |||||  ||||||||||||||    
T  31109748 tagggctgtttt-gttgttgttggcttggagaccatttgttctcattgattatcactatcacttgctgcacacatcattgtttatttcattggtgtga 31109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 49091585 - 49091472
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| ||||||||||||| |||    
T  49091585 ctaggtctgtttttgttgttgtt-gcttggagacactttatct-attgattaccacttcct-ttgctccacacatctttgttattcattggtgtgatttt 49091489  T
Q  101 taaccggattcacaaca 117  Q
      |||| ||||||||||    
T  49091488 gtaccgaattcacaaca 49091472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 16879985 - 16879914
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  16879985 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 16879914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 16884841 - 16884770
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  16884841 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 16884770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24261496 - 24261567
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  24261496 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 24261567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 24266375 - 24266446
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  24266375 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 24266446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 9185346 - 9185449
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||||||  |||  | ||| ||||||||||  || ||||||||||||||||||||||||||| |||||| |||| |||| |||    
T  9185346 ttttgttgttgtt-gcttggagacacttta-cacattgattaccacttccttttgctccacacatctttgtttttcattagtgtga-ttttgaccgaatt 9185442  T
Q  111 cacaaca 117  Q
    |||||||    
T  9185443 cacaaca 9185449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2479262 - 2479144
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| |||| |||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||||||||||| | |    
T  2479262 ctaggtctgtttttgttgttgtt-gcttagagacacttta-cacattgattaccacttcct-ttgctccacacatctttgtttttcattggtgtgattat 2479166  T
Q  101 taaccgg-attcacaacacata 121  Q
     |||||| | ||||||||||||    
T  2479165 caaccggaactcacaacacata 2479144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 35960678 - 35960622
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga-gttttaaccggattcacaacac 118  Q
    ||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||    
T  35960678 ttgctccacacatctttgtttttcattggtgtgattttttgaccgaattcacaacac 35960622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 29159725 - 29159633
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||| ||||||||||||||||| ||||||||||  |||  || || ||||||||||  |  |||||||||||||||||||| |||||||||||||    
T  29159725 taggtctgtttttgttgttgtt-gcttggagacactttatct-attgattaccacttccctttgctccacacatctttgttattcattggtgtga 29159633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 44848868 - 44848951
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||| ||||||||||  |||| | ||| ||||| ||||| || |||||||||||||| |||||||||||||||||||    
T  44848868 tttttgttgttgtt-gcttggagacactttg-cacattgattagcactacct-ttgctccacacatccttgtttttcattggtgtga 44848951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 46516544 - 46516597
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| ||||||||||||| ||||  ||| ||||||||||    
T  46516544 ttgctccacacatctttgttattcattggtgtga-ttttgtccgaattcacaaca 46516597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 4796903 - 4796936
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  4796903 ttgctccacacatctttgttattcattggtgtga 4796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 47263544 - 47263511
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||| ||||||||||||||||||||||||    
T  47263544 ttgctccacgcatctttgtttttcattggtgtga 47263511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30125969 - 30126084
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||    
T  30125969 ctagggctgtttttgttgtagttagcttggagaccatttggctcatagattatcactacctcttgctccacacatctttg-ttttcattggtgtgatttt 30126067  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  30126068 caaccggattcacaaca 30126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5674943 - 5675057
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||| ||||||||||||| ||||||  | | |||  ||| | |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  5674943 ctagggctggttttgttgttgtt-gcttgggaaactttttactctttgattaccactatcttttgctccacacatctttgtttt-cattggtgtgagttt 5675040  T
Q  101 taaccggattcacaaca 117  Q
    |||||||||||||||||    
T  5675041 taaccggattcacaaca 5675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11856892 - 11856795
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  11856892 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 11856795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 22010871 - 22010958
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  22010871 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 22010958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14737741 - 14737838
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||| |||||  ||||||||||||||    
T  14737741 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14737838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 31936501 - 31936398
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31936501 ttttgttgttgtt-gcttggagacacttta-cacattgattaccacttccttttgctccacacatctttgtttttcattggtgtga-ttttaaccggatt 31936405  T
Q  111 cacaaca 117  Q
    |||||||    
T  31936404 cacaaca 31936398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14742600 - 14742697
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| |||||||| |||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||| |||||  ||||||||||||||    
T  14742600 ctagggctgtttt-gttgttgtatgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattgtttatttcattggtgtga 14742697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 31086642 - 31086752
Alignment:
Q  7 ctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccg 106  Q
    |||||||||||||| |||||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||| ||||||||||||| |||  ||||    
T  31086642 ctgtttttgttgtt-tttgcttggagacactttatc-cattgattaccacttcct-ttgctccacacatctttgttcttcattggtgtgattttgtaccg 31086738  T
Q  107 gattcacaacacat 120  Q
     |||||||||||||    
T  31086739 aattcacaacacat 31086752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 6438411 - 6438324
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||||||||||  ||||| |  ||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  6438411 tttgttgttgtttgcttggaagccattggttctcattgattaccactatcacttgctccacacatcattgtttatttcattggtgtga 6438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22708942 - 22708829
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||||||||||||||  |  |||| | |||||||||||||| | ||||||||||||||    
T  22708942 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccactcccctttgcactacacatctttgtttat-attggtgtgagttt 22708846  T
Q  101 taaccggattcacaaca 117  Q
    || ||||||||||||||    
T  22708845 tatccggattcacaaca 22708829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 28155744 - 28155817
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgttt 83  Q
    ||||||||||||| ||||| ||||||||||  ||||| ||||| ||||||| ||||||||||||||| ||||||    
T  28155744 ttttgttgttgttagcttgaagaccatttgctctcattgattatcactatcacttgctccacacatcattgttt 28155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28184425 - 28184325
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg---ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgt 94  Q
    ||||||||||||| |||||||||||||||||||||||||     ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||    
T  28184425 ctagggctgtttt-gttgttgtttgcttggagaccatttttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgt 28184327  T
Q  95 ga 96  Q
    ||    
T  28184326 ga 28184325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21355961 - 21355869
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||| ||||||||||||||||| ||||| ||||  |||  | ||| ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  21355961 ctaggtctgtttttgttgttgtt-gcttgaagacacttta-cacattgattaccacttcct-ttgctccacacatctttgtttttcattggtgtga 21355869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 5343392 - 5343326
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  5343392 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 5343326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 5757651 - 5757742
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || ||||||||||| ||||||||||||||||||||||    
T  5757651 taggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacttctttgtttttcattggtgtga 5757742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 6005329 - 6005263
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  6005329 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 6005263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 33330620 - 33330686
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  33330620 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 33330686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 5572829 - 5572884
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaacaca 119  Q
    |||||||||||||||||||| ||||||||||||| ||||  ||| ||||||||||||    
T  5572829 ttgctccacacatctttgttattcattggtgtga-ttttgtccgaattcacaacaca 5572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 5017705 - 5017759
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||||| |||||| |||||| ||||| | | ||||||||||    
T  5017705 ttgctccacacatctttgttattcattagtgtgatttttaccggaattcacaaca 5017759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 33336117 - 33336183
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| | |||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  33336117 ttttgttgttgttagtttggaggccatttgcactcatagattatctctatcacttgctccacacatc 33336183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 160 - 304
Target Start/End: Original strand, 23911043 - 23911187
Alignment:
Q  160 atagtacggccaacagaataattggaaagcaagaaaacaatcaaaattatgtgaacaagttcatgaaatgtaactatctcaaaggtactttgaaaattaa 259  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||  ||||  ||| ||||||||||||||||||  |||||  ||    
T  23911043 atagtacagccaacagaataattggcaagaaagaaaacaatcaaatttatgtgaataaggccatggcatgcaactatctcaaaggtactaagaaaaacaa 23911142  T
Q  260 gcttctgttatataaaagaaacaagcttctaaagagctaccaaaa 304  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  23911143 gcttctgttacataaaagaaacaagcttctaaagagctaccaaaa 23911187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24741862 - 24741748
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24741862 ctagggctgtttttgttgttgtt-gcttggaaaccattttgttcattgattaccactatctcttgctccacacatctttg-ttttcattggtgtgagttt 24741765  T
Q  101 taaccggattcacaaca 117  Q
     ||||||||||||||||    
T  24741764 caaccggattcacaaca 24741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 29760554 - 29760445
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggatt 110  Q
    ||||||||||||| ||||||| ||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29760554 ttttgttgttgtt-gcttggaaaccattttgtttattgattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttcaaccggatt 29760456  T
Q  111 cacaacacata 121  Q
    |||||||||||    
T  29760455 cacaacacata 29760445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 51520367 - 51520258
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||||  ||||||    
T  51520367 tttgttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgagtttggaaccgg 51520268  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  51520267 attcacaaca 51520258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9224571 - 9224668
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  9224571 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9224668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9229358 - 9229455
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  9229358 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 9229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 56146886 - 56146995
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtgagttt-taaccgg 107  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||  ||||||    
T  56146886 tttgttgttgtttgcttggagaccaattgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtgaatttggaaccgg 56146985  T
Q  108 attcacaaca 117  Q
    ||||||||||    
T  56146986 attcacaaca 56146995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28468700 - 28468813
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||||||||||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| |||||||||||||||    
T  28468700 ctagggctgtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtgtgagttt 28468796  T
Q  101 taaccggattcacaaca 117  Q
    || ||| ||||||||||    
T  28468797 tatccgaattcacaaca 28468813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 45347991 - 45348079
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  45347991 ttttgttgttgttagcttgaagaccatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 45357470 - 45357558
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  45357470 ttttgttgttgttagcttgaagaccatttgttctcatagattaccactatcacttgctccacacatcattgtttatttcattggtgtga 45357558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 5732581 - 5732486
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgt-ttttcattggtgtga 96  Q
    |||||||||||| ||||||||| ||||||||||||||||  ||||| ||||||||| ||| ||||||||||||||| |||| |||||||||||||||    
T  5732581 tagggctgtttt-gttgttgttagcttggagaccatttgttctcattgattaccaccatcacttgctccacacatcattgtattttcattggtgtga 5732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 3813935 - 3813846
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||   | ||||||||||||||    
T  3813935 ttttgttgttgtttgcttggagaccatttgctctcattgattaccactatcacttgctccacacatcattggtttatttcattggtgtga 3813846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16624183 - 16624297
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||| ||||  || |||||||||||||||||||| ||||||||||||| |||    
T  16624183 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattatcacttcct-ttgctccacacatctttgttattcattggtgtgatttt 16624279  T
Q  101 taaccgg-attcacaaca 117  Q
    | ||||| ||||||||||    
T  16624280 ttaccggaattcacaaca 16624297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 25862197 - 25862309
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtttt 101  Q
    |||| ||||||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| ||||||||||||| ||||    
T  25862197 taggtctgtttttgttgttgtt-gcttggagacactttatct-attgattaccacttcct-ttgctccacacatctttgttattcattggtgtga-tttt 25862292  T
Q  102 aaccggattcacaacac 118  Q
      ||| |||||||||||    
T  25862293 gtccgaattcacaacac 25862309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 31985815 - 31985919
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggat 109  Q
    |||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||| ||||||||||||| ||| ||||||||||||||||  ||| ||    
T  31985815 tttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgcaccacacatctttg-tttacattggtgtgagttttgtccgaat 31985911  T
Q  110 tcacaaca 117  Q
    ||||||||    
T  31985912 tcacaaca 31985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 18855637 - 18855549
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  18855637 tttgttgttgtttgcttggaagccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 18855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 24333689 - 24333641
Alignment:
Q  48 gattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  24333689 gattaccacttccttttgctccacacatctttgttattcattggtgtga 24333641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 8689714 - 8689765
Alignment:
Q  66 ctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||||||||||||||| ||||||||||||| ||||| | | ||||||||||    
T  8689714 ctccacacatctttgttattcattggtgtgatttttaccggaattcacaaca 8689765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 16630913 - 16630956
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccg 106  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||    
T  16630913 ttgctccacacatctttgttattcattggtgtgattttttaccg 16630956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 3796704 - 3796788
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||| ||||||||||  |||  || || ||||| ||||  || |||||||||||||||||||| |||||||||||||    
T  3796704 tttttgttgttgtt-gcttggagacactttatct-attgattatcacttccttttgctccacacatctttgttattcattggtgtga 3796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 5397069 - 5397119
Alignment:
Q  67 tccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||| ||||||||||||| ||||| | | ||||||||||    
T  5397069 tccacacatctttgttattcattggtgtgatttttaccggaattcacaaca 5397119  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 34496056 - 34496108
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  34496056 ttgctccacacatctttg-ttttcattggtgtga-ttttgaccgaattcacaaca 34496108  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 38152673 - 38152727
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||| ||||||||||||| ||||||||||||| ||||| | | ||||||||||    
T  38152673 ttgctctacacatctttgttattcattggtgtgatttttaccggaattcacaaca 38152727  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 54867096 - 54867013
Alignment:
Q  10 tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||| ||||||||||  |||  || || ||||||||||  || |||||||||||||||||||| |||||||||||||    
T  54867096 tttttgttgttgtt-gcttggagacactttatct-attgattaccacttcct-ttgctccacacatctttgttattcattggtgtga 54867013  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5396848 - 5396929
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgttttt 85  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||    
T  5396848 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgttttt 5396929  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 10047243 - 10047188
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaacaca 119  Q
    ||||||||||||| |||||| ||||||||||||| ||||  ||| ||||||||||||    
T  10047243 ttgctccacacatttttgttattcattggtgtga-ttttgtccgaattcacaacaca 10047188  T

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Target: scaffold0978 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 412 - 527
Alignment:
Q  2 tagggctgttttt-gttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtt 99  Q
    ||||||||||||| ||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  412 tagggctgttttttgttgttgtt-gcttggaaaccatttttgctcatagattaccactatctcttgctccacacatctttg-ttttcattggtgtgagtt 509  T
Q  100 ttaaccggattcacaaca 117  Q
    ||||  ||||||||||||    
T  510 ttaaatggattcacaaca 527  T

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Target: scaffold0135 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35226 - 35323
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttgtt--tttcattggtgtga 96  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  35226 ctagggctgtttt-gttgttgtttgcttggagaccatttgttctcattgattaccactatctcttgctccacacatcattgtttatttcattggtgtga 35323  T

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Target: scaffold0188 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24217 - 24332
Alignment:
Q  1 ctagggctg-tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtt 99  Q
    ||||||||| |||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||||||  ||||||||||||||    
T  24217 ctagggctggtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttgttta-cattggtgtgagtt 24313  T
Q  100 ttaaccggattcacaacac 118  Q
    |||||||||||||||||||    
T  24314 ttaaccggattcacaacac 24332  T

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Target: scaffold0188; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18124 - 18238
Alignment:
Q  1 ctagggctg-tttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagtt 99  Q
    ||||||||| |||||||||||||| ||||||||||  |||  | ||||||||||||||  || |||||||||||||||||| ||| ||||||| ||||||    
T  18124 ctagggctggtttttgttgttgtt-gcttggagacacttta-cacatagattaccacttccttttgctccacacatctttg-tttacattggtttgagtt 18220  T
Q  100 ttaaccggattcacaaca 117  Q
    ||||||||||||||||||    
T  18221 ttaaccggattcacaaca 18238  T

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Target: scaffold0355 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 9805 - 9902
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttg-gctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  9805 tagggctgtttt-gttgttgtttggttggagaccatttgctctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 9902  T

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Target: scaffold0197 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 14482 - 14553
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  14482 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 14553  T

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Target: scaffold0197; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 19338 - 19404
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  19338 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 19404  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 182137 - 182208
Alignment:
Q  11 ttttgttgttgttt-gcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg 80  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||    
T  182137 ttttgttgttgattagcttggaggccatttgcactcatagattacctctatctcttgctccacacatctttg 182208  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 44134 - 44225
Alignment:
Q  2 tagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtga 96  Q
    |||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || ||||||||||||||||||||||||||||||||||    
T  44134 taggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgtttttcattggtgtga 44225  T

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Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37006 - 37119
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttt 100  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || |||||||||||||||||||||||||| ||||||| |||    
T  37006 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgtttttcatcggtgtga-ttt 37101  T
Q  101 taaccgg-attcacaaca 117  Q
    | ||||| ||||||||||    
T  37102 tcaccggaattcacaaca 37119  T

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Target: scaffold1805 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1805
Description:

Target: scaffold1805; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1331 - 1217
Alignment:
Q  1 ctagggctgtttttgttgttgtttgcttggagaccatttggctcatagattaccactatctcttgctccacacatctttgt-ttttcattggtgtgagtt 99  Q
    ||||| ||||||||||||||||| ||||||||||  |||  | ||| ||||||||||  || ||||||||||||||||||| ||||||||||||||| ||    
T  1331 ctaggtctgtttttgttgttgtt-gcttggagacacttta-cacattgattaccacttcct-ttgctccacacatctttgttttttcattggtgtgattt 1235  T
Q  100 ttaaccggattcacaaca 117  Q
    ||| | | ||||||||||    
T  1234 ttaccagaattcacaaca 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 29703 - 29777
Alignment:
Q  42 ctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||| ||||||||||  || ||||| ||||||| |||||||||||||||||||| |||| |||| ||||||||||    
T  29703 ctcattgattaccacttcct-ttgcttcacacatttttgtttttcattggtgtgatttttgaccgaattcacaaca 29777  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 43141 - 43067
Alignment:
Q  42 ctcatagattaccactatctcttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    ||||| ||||||||||  || ||||| ||||||| |||||||||||||||||||| |||| |||| ||||||||||    
T  43141 ctcattgattaccacttcct-ttgcttcacacatttttgtttttcattggtgtgatttttgaccgaattcacaaca 43067  T

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Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 273 - 185
Alignment:
Q  12 tttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  |||||||  ||||| ||||| ||| ||| |||||||||||||||||||   | ||||||||||||||    
T  273 tttgttgttgtttgcttggaagccatttgttctcattgattatcaccatcacttgctccacacatctttggtttatttcattggtgtga 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 85549 - 85495
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtgagttttaaccggattcacaaca 117  Q
    |||||| ||||||||||||||||||||||||||| ||||| | | ||||||||||    
T  85549 ttgctctacacatctttgtttttcattggtgtgatttttaccggaattcacaaca 85495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 149129 - 149195
Alignment:
Q  11 ttttgttgttgtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatc 76  Q
    ||||||||||||| |||||||| |||||||  ||||||||||| | ||||| |||||||||||||||    
T  149129 ttttgttgttgttagcttggaggccatttgcactcatagattatctctatcacttgctccacacatc 149195  T

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Target: scaffold0127 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 34132 - 34211
Alignment:
Q  21 gtttgcttggagaccatttgg-ctcatagattaccactatctcttgctccacacatctttg---tttttcattggtgtga 96  Q
    ||||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||| |||   | ||||||||||||||    
T  34132 gtttgcttggagaccatttgttctcattgattatcactatcacttgctccacacatcattggtttatttcattggtgtga 34211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 10591 - 10558
Alignment:
Q  63 ttgctccacacatctttgtttttcattggtgtga 96  Q
    |||||||||||||||||||| |||||||||||||    
T  10591 ttgctccacacatctttgttattcattggtgtga 10558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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