View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18196_high_30 (Length: 338)

Name: NF18196_high_30
Description: NF18196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18196_high_30
NF18196_high_30
[»] chr6 (15 HSPs)
chr6 (37-336)||(20743881-20744177)
chr6 (294-336)||(33938701-33938743)
chr6 (292-336)||(9111042-9111086)
chr6 (292-336)||(28951394-28951438)
chr6 (292-336)||(32053783-32053827)
chr6 (292-338)||(9558443-9558489)
chr6 (292-336)||(4494893-4494937)
chr6 (292-336)||(9392690-9392734)
chr6 (292-336)||(9444952-9444996)
chr6 (292-336)||(9677230-9677274)
chr6 (292-336)||(12333590-12333634)
chr6 (292-336)||(12700443-12700487)
chr6 (292-336)||(13496111-13496155)
chr6 (292-336)||(17382079-17382123)
chr6 (292-336)||(29335597-29335641)
[»] chr4 (28 HSPs)
chr4 (18-114)||(1475221-1475317)
chr4 (292-338)||(9913894-9913940)
chr4 (292-336)||(160704-160748)
chr4 (292-336)||(2186355-2186399)
chr4 (292-336)||(35287529-35287573)
chr4 (292-336)||(52270052-52270096)
chr4 (297-336)||(3936627-3936666)
chr4 (292-338)||(32430143-32430189)
chr4 (294-336)||(32923252-32923294)
chr4 (295-336)||(37463520-37463561)
chr4 (295-336)||(40070990-40071031)
chr4 (292-336)||(4916150-4916194)
chr4 (292-336)||(7230275-7230319)
chr4 (292-336)||(9946422-9946466)
chr4 (292-336)||(10069110-10069154)
chr4 (292-336)||(11949785-11949829)
chr4 (292-336)||(12322668-12322712)
chr4 (292-336)||(15170121-15170165)
chr4 (292-336)||(19479499-19479543)
chr4 (292-336)||(19854560-19854604)
chr4 (292-336)||(20799416-20799460)
chr4 (292-336)||(23809944-23809988)
chr4 (292-336)||(24665013-24665057)
chr4 (292-336)||(37193244-37193288)
chr4 (292-336)||(38453260-38453304)
chr4 (292-336)||(43034364-43034408)
chr4 (292-336)||(50362161-50362205)
chr4 (292-336)||(54859731-54859775)
[»] chr7 (29 HSPs)
chr7 (24-95)||(46471566-46471637)
chr7 (292-338)||(48980482-48980528)
chr7 (292-337)||(5526720-5526765)
chr7 (292-336)||(3953436-3953480)
chr7 (292-336)||(10244722-10244766)
chr7 (292-336)||(39801701-39801745)
chr7 (292-336)||(46207755-46207799)
chr7 (292-336)||(46737780-46737824)
chr7 (292-336)||(47589575-47589619)
chr7 (295-336)||(3671822-3671863)
chr7 (295-336)||(7670432-7670473)
chr7 (294-335)||(20131841-20131882)
chr7 (292-333)||(20243250-20243291)
chr7 (292-333)||(47943211-47943252)
chr7 (292-333)||(47948641-47948682)
chr7 (292-336)||(3830063-3830107)
chr7 (292-336)||(8683065-8683109)
chr7 (296-336)||(9522911-9522951)
chr7 (296-336)||(13955479-13955519)
chr7 (292-332)||(14786118-14786158)
chr7 (292-336)||(19416509-19416553)
chr7 (296-336)||(22327677-22327717)
chr7 (292-336)||(22600426-22600470)
chr7 (292-336)||(27462458-27462502)
chr7 (292-336)||(27993051-27993095)
chr7 (292-336)||(35142171-35142215)
chr7 (292-336)||(40752861-40752905)
chr7 (292-336)||(41527555-41527599)
chr7 (298-338)||(45051698-45051738)
[»] chr1 (22 HSPs)
chr1 (292-336)||(48681955-48681999)
chr1 (292-338)||(27853350-27853396)
chr1 (292-338)||(35308180-35308226)
chr1 (283-336)||(42045394-42045447)
chr1 (292-336)||(1794591-1794635)
chr1 (292-331)||(39452455-39452494)
chr1 (292-338)||(3157737-3157783)
chr1 (292-338)||(26086924-26086970)
chr1 (292-333)||(24752673-24752714)
chr1 (292-336)||(2613717-2613761)
chr1 (292-336)||(15602199-15602243)
chr1 (292-336)||(17139539-17139583)
chr1 (292-336)||(21400045-21400089)
chr1 (292-336)||(24695554-24695598)
chr1 (292-336)||(25532968-25533012)
chr1 (292-336)||(26803473-26803517)
chr1 (292-336)||(27449467-27449511)
chr1 (292-336)||(30795696-30795740)
chr1 (292-336)||(37045168-37045212)
chr1 (292-336)||(44243868-44243912)
chr1 (296-336)||(45140028-45140068)
chr1 (292-336)||(52441533-52441577)
[»] chr8 (26 HSPs)
chr8 (292-338)||(33445565-33445611)
chr8 (292-336)||(23852906-23852950)
chr8 (292-330)||(8639905-8639943)
chr8 (292-338)||(10732795-10732841)
chr8 (296-333)||(1135419-1135456)
chr8 (292-337)||(18148823-18148868)
chr8 (295-332)||(35103104-35103141)
chr8 (298-338)||(7280683-7280723)
chr8 (292-336)||(8717497-8717541)
chr8 (292-336)||(11708981-11709025)
chr8 (292-336)||(13286126-13286170)
chr8 (292-336)||(13357463-13357507)
chr8 (292-336)||(14975885-14975929)
chr8 (292-336)||(17704008-17704052)
chr8 (292-332)||(19163562-19163602)
chr8 (292-336)||(21557428-21557472)
chr8 (292-336)||(27191753-27191797)
chr8 (292-336)||(27718916-27718960)
chr8 (296-336)||(30694461-30694501)
chr8 (296-336)||(32878660-32878700)
chr8 (292-336)||(33105386-33105430)
chr8 (292-336)||(33451371-33451415)
chr8 (292-336)||(37117546-37117590)
chr8 (292-336)||(39821879-39821923)
chr8 (296-336)||(41625193-41625233)
chr8 (292-336)||(44293570-44293614)
[»] chr5 (27 HSPs)
chr5 (292-338)||(22619869-22619915)
chr5 (292-337)||(10199014-10199059)
chr5 (296-336)||(6234822-6234862)
chr5 (292-336)||(18589889-18589933)
chr5 (290-338)||(20175718-20175766)
chr5 (292-336)||(27721697-27721741)
chr5 (292-336)||(37932325-37932369)
chr5 (294-336)||(26034630-26034672)
chr5 (292-338)||(41939282-41939328)
chr5 (292-337)||(18995639-18995684)
chr5 (292-337)||(40730216-40730261)
chr5 (292-336)||(5485181-5485225)
chr5 (292-336)||(6489002-6489046)
chr5 (292-336)||(6624771-6624815)
chr5 (292-336)||(8410467-8410511)
chr5 (292-332)||(12165233-12165273)
chr5 (292-336)||(12909188-12909232)
chr5 (292-336)||(15889406-15889450)
chr5 (292-336)||(19248474-19248518)
chr5 (292-336)||(22522823-22522867)
chr5 (292-336)||(24485694-24485738)
chr5 (296-336)||(26409252-26409292)
chr5 (292-336)||(28207127-28207171)
chr5 (292-336)||(31708168-31708212)
chr5 (292-336)||(34436846-34436890)
chr5 (292-336)||(36321516-36321560)
chr5 (292-336)||(42505867-42505911)
[»] chr3 (26 HSPs)
chr3 (294-336)||(43490439-43490481)
chr3 (256-288)||(431551-431583)
chr3 (292-336)||(7868717-7868761)
chr3 (292-336)||(10498717-10498761)
chr3 (292-336)||(22722397-22722441)
chr3 (295-338)||(7938722-7938765)
chr3 (292-337)||(2496550-2496595)
chr3 (292-329)||(3149105-3149142)
chr3 (295-336)||(5941316-5941357)
chr3 (295-336)||(8942015-8942056)
chr3 (291-336)||(25340946-25340991)
chr3 (292-336)||(1149091-1149135)
chr3 (292-336)||(1757691-1757735)
chr3 (292-336)||(4332689-4332733)
chr3 (292-336)||(16980376-16980420)
chr3 (292-336)||(18870747-18870791)
chr3 (292-336)||(21331439-21331483)
chr3 (292-336)||(21506780-21506824)
chr3 (292-336)||(28244126-28244170)
chr3 (292-336)||(29631181-29631225)
chr3 (292-336)||(32632316-32632360)
chr3 (292-336)||(33223863-33223907)
chr3 (287-331)||(39481131-39481175)
chr3 (292-336)||(43345029-43345073)
chr3 (292-336)||(44579631-44579675)
chr3 (292-336)||(53996294-53996338)
[»] chr2 (26 HSPs)
chr2 (292-338)||(9517029-9517075)
chr2 (292-336)||(7201502-7201546)
chr2 (292-336)||(9383231-9383275)
chr2 (292-336)||(17736788-17736832)
chr2 (292-335)||(44526123-44526166)
chr2 (292-334)||(19967413-19967455)
chr2 (292-336)||(346146-346190)
chr2 (292-336)||(2256966-2257010)
chr2 (292-336)||(3196555-3196599)
chr2 (292-336)||(4122035-4122079)
chr2 (292-336)||(4238754-4238798)
chr2 (292-336)||(8091180-8091224)
chr2 (292-336)||(13196695-13196739)
chr2 (292-336)||(16877119-16877163)
chr2 (292-336)||(16989250-16989294)
chr2 (256-288)||(20120172-20120204)
chr2 (292-336)||(20455886-20455930)
chr2 (292-336)||(20517017-20517061)
chr2 (292-336)||(22523034-22523078)
chr2 (292-336)||(32204539-32204583)
chr2 (292-336)||(33063981-33064025)
chr2 (292-336)||(34977199-34977243)
chr2 (292-336)||(40365428-40365472)
chr2 (292-336)||(40546311-40546355)
chr2 (294-338)||(40896529-40896573)
chr2 (300-336)||(41668658-41668694)
[»] scaffold0098 (1 HSPs)
scaffold0098 (292-336)||(5420-5464)
[»] scaffold0118 (1 HSPs)
scaffold0118 (294-336)||(39995-40037)
[»] scaffold0006 (1 HSPs)
scaffold0006 (295-336)||(223699-223740)
[»] scaffold0040 (1 HSPs)
scaffold0040 (292-336)||(56779-56823)
[»] scaffold0012 (1 HSPs)
scaffold0012 (292-336)||(118814-118858)
[»] scaffold0011 (1 HSPs)
scaffold0011 (292-336)||(185258-185302)


Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 37 - 336
Target Start/End: Original strand, 20743881 - 20744177
Alignment:
Q  37 taaagtttatgcaagttaaaggaactcacgatggggtcaggcacttcatatttgtagacatgataatgtggcccagaatataatatgtaatattcttacc 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  20743881 taaagtttatgcaagttaaaggaactcacggtggggtcaggcacttcatatttgtagacttgataatgtggcccagaatataatatctaatattcttacc 20743980  T
Q  137 aactgagtcaagatcaaagacttctaagtcaannnnnnnattaatgtactcatagaaaataaatatgtctggtaaaatatatgaatatttgctcatattt 236  Q
    |||||||| ||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  20743981 aactgagttaagatcaaagagttctaagtcaattttt---ttaatgtactcatagaaaataaatatgtctggtaaaatatacaaatatttgctcatattt 20744077  T
Q  237 attannnnnnnnnnnnnnnagatactttgtggctcattttagatactattgtatctcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||               ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  20744078 attattttttgggttttttagatactttgtggctcattttagatactattgtctctcctcgtgagcttagctcagttggtatggacaatgcataatatat 20744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 33938743 - 33938701
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  33938743 ctcgtgagcttagctcagttggtatgaacaatgcataatatat 33938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 9111042 - 9111086
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  9111042 tcctcgtgagcttagttcagttggtatgaacaatgcataatatat 9111086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 28951394 - 28951438
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataatatat 28951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 32053783 - 32053827
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  32053783 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 32053827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 9558443 - 9558489
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  9558443 tcctcgtgagcttagctcggttggtatgaacaatacataatatatac 9558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 4494937 - 4494893
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  4494937 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 4494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 9392734 - 9392690
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||||| ||||||||||||||    
T  9392734 tcctcgtgagcttagctcagttgttatgaaaaatgcataatatat 9392690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 9444952 - 9444996
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  |||||||||||| |||| ||||    
T  9444952 tcctcgtgagcttagctcagttggtatgaacaatgtataaaatat 9444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 9677230 - 9677274
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || || ||||||||||||||||    
T  9677230 tcctcgtgagcttagctcagttggtttggacaatgcataatatat 9677274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 12333634 - 12333590
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  12333634 tcctcgtgagcttagctcagttagtatggacaatgcataaaatat 12333590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 12700487 - 12700443
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||    
T  12700487 tccttgtgagcttagttcagttggtatgaacaatgcataatatat 12700443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 13496111 - 13496155
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||   |||||||||||||||||||||    
T  13496111 tcctcgtgagcttaactcagttgatatgaacaatgcataatatat 13496155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 17382079 - 17382123
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataatatat 17382123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 29335641 - 29335597
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||    
T  29335641 tcctcgtgagcttaactcagttagtataaacaatgcataatatat 29335597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 1475317 - 1475221
Alignment:
Q  18 gacacaacaataacagtcgtaaagtttatgcaagttaaaggaactcacgatggggtcaggcacttcatatttgtagacatgataatgtggcccagaa 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  1475317 gacacaacaataacagtcataaagtttatgcaagttaaaggaactcacggtggagtcaggcacttcatatttgtagacttgataatgtggcccagaa 1475221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 9913894 - 9913940
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  9913894 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatatac 9913940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 160704 - 160748
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||    
T  160704 tcctcgtgagcttagttcagtaggtattaacaatgcataatatat 160748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 2186399 - 2186355
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  2186399 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 2186355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 35287573 - 35287529
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  35287573 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 35287529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 52270096 - 52270052
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  52270096 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 52270052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 3936627 - 3936666
Alignment:
Q  297 gtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataatatat 3936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 32430189 - 32430143
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  32430189 tcctcgtgagcttaactcagttagtatgaacaatgcataaaatatac 32430143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 32923294 - 32923252
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  32923294 ctcgtgagcttaactcagttggtatgaacaatgcataatatat 32923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 37463520 - 37463561
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  37463520 tcgtgagcttagctcggttggtatgaacaatgcataatatat 37463561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 40071031 - 40070990
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  40071031 tcgtgagcttaactcagttggtatgaacaatgcataatatat 40070990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 4916150 - 4916194
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||||||||||  || |||||||||||||||||||    
T  4916150 tcctcgtgaacttagctcagttggtttgaacaatgcataatatat 4916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 7230275 - 7230319
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  7230275 tcctcgtgagcttagctcagttggtaaggacaatgcataatatat 7230319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 9946422 - 9946466
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  9946422 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 9946466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 10069154 - 10069110
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||||||||||  |||||||||||| |||||||||    
T  10069154 tcctcgtgaacttagctcagttggtatgaacaatgtataatatat 10069110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 11949829 - 11949785
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||    
T  11949829 tcctcatgagcttagctcagttggtatggacaatgcataatatat 11949785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 12322668 - 12322712
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  12322668 tcctcgtgagcttagctcagttggtacggacaatgcataatatat 12322712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 15170165 - 15170121
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||    
T  15170165 tcctcgtgaacttaactcagttggtatgaacaatgcataatatat 15170121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 19479543 - 19479499
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||||||||||||||||   |||||||||||||||||||||    
T  19479543 tccttgtgagcttagctcagttaatatgaacaatgcataatatat 19479499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 19854560 - 19854604
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||||||||||||||||  ||||| ||||||||||||||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataatatat 19854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 20799460 - 20799416
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  20799460 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 20799416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 23809944 - 23809988
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| |||| |||||||||||    
T  23809944 tcctcgtgagcttagctcagttggtatggacaaagcataatatat 23809988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 24665057 - 24665013
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| | ||||||||||||||    
T  24665057 tcctcgtgagcttagctcagttggtatggagaatgcataatatat 24665013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 37193244 - 37193288
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||    
T  37193244 tcctcgtgagcttagctcagttagtatggacaatgtataatatat 37193288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 38453260 - 38453304
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  | ||| ||||||||||||||||    
T  38453260 tcctcgtgagcttagctcagttggcatggacaatgcataatatat 38453304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 43034408 - 43034364
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  43034408 tcctcgtgagcttaactcagttggtatggacaatgcataatatat 43034364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 50362205 - 50362161
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  50362205 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 50362161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 54859775 - 54859731
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||| ||  || |||||||||||||||||||    
T  54859775 tcctcgtgagcttagctcggttggtttgaacaatgcataatatat 54859731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 46471637 - 46471566
Alignment:
Q  24 acaataacagtcgtaaagtttatgcaagttaaaggaactcacgatggggtcaggcacttcatatttgtagac 95  Q
    |||||| || || |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  46471637 acaataccattcataaagtgtatgcaagttaaaggaactcacggtggagtcaggcacttcatatttgtagac 46471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 48980482 - 48980528
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||    
T  48980482 tcctcgtgagcttagctcagttggtatggacaatgcataatatatac 48980528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 5526720 - 5526765
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  5526720 tcctcgtgagcttagctcagttggtatggacaatgcataatatata 5526765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 3953436 - 3953480
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  3953436 tcctcgtgagcttagctcagtcggtatggacaatgcataatatat 3953480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 10244722 - 10244766
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  10244722 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 10244766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 39801701 - 39801745
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  39801701 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 39801745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 46207755 - 46207799
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  46207755 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 46207799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 46737780 - 46737824
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  46737780 tcctcgtgagcttagctcagtttgtttggacaatgcataatatat 46737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 47589619 - 47589575
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  47589619 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 47589575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 3671822 - 3671863
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||| |||||||||||  ||||||||||||||||||||||    
T  3671822 tcgtgatcttagctcagtcggtatgaacaatgcataatatat 3671863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 7670432 - 7670473
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  7670432 tcgtgagcttagctcagttggtttgaacaatgcataatatat 7670473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 20131841 - 20131882
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatata 335  Q
    |||||||||||||||||||  | |||||||||||||||||||    
T  20131841 ctcgtgagcttagctcagttggcatgaacaatgcataatata 20131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 20243250 - 20243291
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataata 333  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  20243250 tcctcgtgagcttagctcagttggtatggacaatgcataata 20243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 47943211 - 47943252
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataata 333  Q
    |||||||||||||| |||||| || |||||||||||||||||    
T  47943211 tcctcgtgagcttaactcagtttgcatgaacaatgcataata 47943252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 47948641 - 47948682
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataata 333  Q
    |||||||||||||| |||||| || |||||||||||||||||    
T  47948641 tcctcgtgagcttaactcagtttgcatgaacaatgcataata 47948682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 3830063 - 3830107
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| ||||||||||| |||| | ||||||||||||||||    
T  3830063 tcctcgtgaacttagctcagtttgtagggacaatgcataatatat 3830107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 8683065 - 8683109
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||    
T  8683065 tcctcgtgagcttagctcagttggtatagacaatgcataatatat 8683109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 9522911 - 9522951
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||| |||||||||||  ||||||||||||||||||||||    
T  9522911 cgtgaacttagctcagttggtatgaacaatgcataatatat 9522951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 13955479 - 13955519
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||||||||||||||||| ||||    
T  13955479 cgtgagcttagctcagttggtatgaacaatgcataaaatat 13955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 14786118 - 14786158
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataat 332  Q
    |||||||||||||||||||||  ||||||||||||| ||||    
T  14786118 tcctcgtgagcttagctcagttggtatgaacaatgcttaat 14786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 19416509 - 19416553
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  19416509 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 19416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 22327677 - 22327717
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  22327677 cgtgagcttagctcagttcgtaagaacaatgcataatatat 22327717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 22600426 - 22600470
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||| ||||||||||||||    
T  22600426 tcctcgtgagcttagctcagtcagtttgaataatgcataatatat 22600470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 27462502 - 27462458
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||    
T  27462502 tcctcgtgagcatagctcagttggtatggacaatgcataatatat 27462458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 27993095 - 27993051
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||    
T  27993095 tcctcgtgagcttaactcagttggtatgaacaatgcataaaatat 27993051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 35142215 - 35142171
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  35142215 tcctcgtgagcttagctcagttgatatggacaatgcataatatat 35142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 40752905 - 40752861
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||| ||||||||||    
T  40752905 tcctcgtgagcttagctcagttagtatggacaatacataatatat 40752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 41527555 - 41527599
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||| |||  ||||| ||||||||||||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatat 41527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 45051698 - 45051738
Alignment:
Q  298 tgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  45051698 tgagcttagctcagttggtatgaacaatgcataatgtatac 45051738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 48681999 - 48681955
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  48681999 tcctcgtgagcttagctcagttggtatgaacaatgcataatatat 48681955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 27853350 - 27853396
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  27853350 tcctcgtgagcttaactcagttggtatgaacaatgcataatatatac 27853396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 35308180 - 35308226
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  35308180 tcctcgtgagcttagttcagttggtatgaacaatgcataatatatac 35308226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 42045447 - 42045394
Alignment:
Q  283 tattgtatctcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||| |||||||||||||||||||||  ||||| ||||||||||||||||    
T  42045447 tattctatgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 42045394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 1794591 - 1794635
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  1794591 tcctcgtgagcttagctcagttagtatggacaatgcataatatat 1794635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 39452455 - 39452494
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataa 331  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  39452455 tcctcgtgagcttagctcagttggtatgaacaatgcataa 39452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 3157783 - 3157737
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    ||||||||||||||||||| |  || |||||||||||||||||||||    
T  3157783 tcctcgtgagcttagctcaattagtttgaacaatgcataatatatac 3157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 26086924 - 26086970
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||| ||||||  |||||| |||||||||||||||||    
T  26086924 tcctcgtgagcttaactcagttggtatgatcaatgcataatatatac 26086970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 24752714 - 24752673
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataata 333  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  24752714 tcctcgtgagcttagctcagttggtatggacaatgcataata 24752673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 2613717 - 2613761
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  2613717 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 2613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 15602243 - 15602199
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||    
T  15602243 tcctcgtgagcatagctcagttggtatggacaatgcataatatat 15602199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 17139583 - 17139539
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  17139583 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 17139539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 21400089 - 21400045
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  21400089 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 21400045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 24695554 - 24695598
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  24695554 tcctcgtgagtttagctcagttggtatgaacaatacataatatat 24695598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 25532968 - 25533012
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  25532968 tcctcgtgagcttagttcagttggtatggacaatgcataatatat 25533012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 26803517 - 26803473
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||||||||||  ||||| ||||||||||||||||    
T  26803517 tcctcgtgaacttagctcagttggtatggacaatgcataatatat 26803473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 27449511 - 27449467
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  27449511 tcctcgtgagcttagctcagttaatatggacaatgcataatatat 27449467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 30795696 - 30795740
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||    
T  30795696 tcctcgtgaacttagctcagttggtaagaacaatgcataatatat 30795740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 37045212 - 37045168
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||    
T  37045212 tcctcgtgagctcagctcagttggtaggaacaatgcataatatat 37045168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 44243868 - 44243912
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||    
T  44243868 tcctcgtgagtttagctcagttggtaggaacaatgcataatatat 44243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 45140068 - 45140028
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  45140068 cgtgagcttagctcagttggtatggacaatgcataatatat 45140028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 52441577 - 52441533
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||    
T  52441577 tcctcgtgagcttagctcagttggtatagacaatgcataatatat 52441533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 33445565 - 33445611
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  33445565 tcctcgtgagcttagctcagttggtaggaacaatgcataatatatac 33445611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 23852906 - 23852950
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  23852906 tcctcgtgagcttagctcagtcggtatggacaatgcataatatat 23852950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 8639905 - 8639943
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcata 330  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  8639905 tcctcgtgagcttagctcagtttgtatggacaatgcata 8639943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 10732841 - 10732795
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||    
T  10732841 tcctcgtgagcttaactcaattggtatgaacaatgcataatatatac 10732795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 1135456 - 1135419
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataata 333  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  1135456 cgtgagcttaactcagtttgtatgaacaatgcataata 1135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 18148868 - 18148823
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    |||||||||||||| ||||||   ||||||||||||||||||||||    
T  18148868 tcctcgtgagcttaactcagttaatatgaacaatgcataatatata 18148823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 35103104 - 35103141
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataat 332  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  35103104 tcgtgagcttagctcagttggtatgaacaatgcataat 35103141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 7280723 - 7280683
Alignment:
Q  298 tgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||  ||| ||||||||||||||||||||    
T  7280723 tgagcttagctcagtgggtaggaacaatgcataatatatac 7280683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 8717541 - 8717497
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatat 8717497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 11708981 - 11709025
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  11708981 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 11709025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 13286126 - 13286170
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||    
T  13286126 tcctcgtgagcttagctcagttggtatagacaatgcataatatat 13286170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 13357507 - 13357463
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  13357507 tcctcgtgagcttaactcagttggtatggacaatgcataatatat 13357463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 14975929 - 14975885
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||| ||||||| ||||    
T  14975929 tcctcgtgagcttagctcagttggtatgaacagtgcataaaatat 14975885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 17704008 - 17704052
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  17704008 tcctcgtgagcttagctcagttggtaaggacaatgcataatatat 17704052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 19163602 - 19163562
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataat 332  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  19163602 tcctcgtgagcttagctcagttggtatggacaatgcataat 19163562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 21557428 - 21557472
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  21557428 tcctcgtgagcttaactcagttagtatggacaatgcataatatat 21557472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 27191753 - 27191797
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||    
T  27191753 tcctcgtgagcttagctcagttggtaagaacaattcataatatat 27191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 27718960 - 27718916
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  27718960 tcctcgtgagcttagctcagttgatatggacaatgcataatatat 27718916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 30694501 - 30694461
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  30694501 cgtgagcttatctcagtttgtatgaacaatgcataaaatat 30694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 32878660 - 32878700
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  32878660 cgtgagcttagctcagttggtaagaacaatgcataatatat 32878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 33105386 - 33105430
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||   || |||||||||||||||||||    
T  33105386 tcctcgtgagcttagctcagctggtttgaacaatgcataatatat 33105430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 33451415 - 33451371
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| | ||||||||||||||    
T  33451415 tcctcgtgagcttagctcagttggtatggataatgcataatatat 33451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 37117590 - 37117546
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||| ||| |  ||||||||||||||||||||||    
T  37117590 tcctcgtgagcttagatcaattggtatgaacaatgcataatatat 37117546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 39821879 - 39821923
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  39821879 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 39821923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 41625193 - 41625233
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  41625193 cgtgagcttagctcagttggtatgaataatgcataatatat 41625233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 44293570 - 44293614
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||    
T  44293570 tcctcgtgagcttagctcagttggtatagacaatgcataatatat 44293614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 22619869 - 22619915
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  22619869 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatatac 22619915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 10199014 - 10199059
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  10199014 tcctcgtgagcttagctcagttggtatggacaatgcataatatata 10199059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 6234862 - 6234822
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  6234862 cgtgagcttagctcagttagtatgaacaatgcataatatat 6234822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 18589933 - 18589889
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||    
T  18589933 tcctcgtgagcttaactcagttggtatgaacaatgcataatatat 18589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 20175718 - 20175766
Alignment:
Q  290 tctcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||||||  ||||| |||||| |||||||||||    
T  20175718 tctcctcgtgagcttagctcagttggtatggacaatgtataatatatac 20175766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 27721741 - 27721697
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  27721741 tcctcgtgagcttagctcagttggtaggaacaatgcataatatat 27721697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 37932325 - 37932369
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  37932325 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 37932369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 26034672 - 26034630
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  26034672 ctcgtgagcttaactcagttggtatgaacaatgcataatatat 26034630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 41939328 - 41939282
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    ||||||||||||||||||| |  ||||||| ||||||||||||||||    
T  41939328 tcctcgtgagcttagctcaattggtatgaataatgcataatatatac 41939282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 18995639 - 18995684
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    ||||||||| |||| |||||| |||||| |||||||||||||||||    
T  18995639 tcctcgtgaacttaactcagtttgtatggacaatgcataatatata 18995684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 40730261 - 40730216
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    ||||||||||||||||| |||   ||||||||||||||||||||||    
T  40730261 tcctcgtgagcttagctaagttgatatgaacaatgcataatatata 40730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 5485181 - 5485225
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  5485181 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 5485225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 6489002 - 6489046
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  6489002 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 6489046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 6624771 - 6624815
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  | ||| ||||||||||||||||    
T  6624771 tcctcgtgagcttagctcagttggcatggacaatgcataatatat 6624815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 8410511 - 8410467
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||||||||||||| ||||    
T  8410511 tcctcgtgagcttagctcagttagtgtgaacaatgcataaaatat 8410467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 12165233 - 12165273
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataat 332  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  12165233 tcctcgtgagcttagctcaggtggtatgaacaatgcataat 12165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 12909232 - 12909188
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||  ||||||||||  ||||||||||||||||||||||    
T  12909232 tcctcgtgaatttagctcagttggtatgaacaatgcataatatat 12909188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15889406 - 15889450
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  15889406 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 15889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 19248474 - 19248518
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||    
T  19248474 tcctcgtgagcttagctcagttggtatagacaatgcataatatat 19248518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 22522867 - 22522823
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||| ||  ||||| ||||||||||||||||    
T  22522867 tcctcgtgagcttagctcggttggtatggacaatgcataatatat 22522823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 24485694 - 24485738
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||| |||  ||||| ||||||||||||||||    
T  24485694 tcctcgtgagcttagcttagttggtatggacaatgcataatatat 24485738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 26409252 - 26409292
Alignment:
Q  296 cgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||  ||||| ||||||||||||||||    
T  26409252 cgtgagcttagctcagttggtatggacaatgcataatatat 26409292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 28207127 - 28207171
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  28207127 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 28207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 31708212 - 31708168
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||    
T  31708212 tcctcgtgagcattgctcagttggtatgaacaatgcataatatat 31708168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 34436846 - 34436890
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  34436846 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 34436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 36321560 - 36321516
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  36321560 tcctcgtgagcttagctcagttggtaaggacaatgcataatatat 36321516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 42505867 - 42505911
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||| |||||||||||||  ||||| ||||||||||||||||    
T  42505867 tcctcgtaagcttagctcagttggtatggacaatgcataatatat 42505911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 43490481 - 43490439
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  43490481 ctcgtgagcttagctcagttggtatgaacaatgcataatatat 43490439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 431583 - 431551
Alignment:
Q  256 agatactttgtggctcattttagatactattgt 288  Q
    |||||||||||||||||||||||||||||||||    
T  431583 agatactttgtggctcattttagatactattgt 431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 7868717 - 7868761
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  7868717 tcctcgtgagcttagctcagttggtaagaacaatgcataatatat 7868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 10498761 - 10498717
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  10498761 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 10498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 22722397 - 22722441
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  22722397 tcctcgtgagcttagctcagttagtatgaacaatgcataaaatat 22722441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 7938722 - 7938765
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||| |||||  ||||||||||||||||||||||||    
T  7938722 tcgtgagcttagttcagttggtatgaacaatgcataatatatac 7938765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 2496550 - 2496595
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatata 337  Q
    ||||||||||||||| |||||   ||||||||||||||||||||||    
T  2496550 tcctcgtgagcttagttcagttgctatgaacaatgcataatatata 2496595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 3149142 - 3149105
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcat 329  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  3149142 tcctcgtgagcttaactcagtttgtatgaacaatgcat 3149105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 5941357 - 5941316
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  5941357 tcgtgagcttaactcagttggtatgaacaatgcataatatat 5941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 8942015 - 8942056
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  8942015 tcgtgagcttaactcagttggtatgaacaatgcataatatat 8942056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 25340991 - 25340946
Alignment:
Q  291 ctcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||||  ||||| ||||||||||| ||||    
T  25340991 ctcctcgtgagcttagctcagttggtatggacaatgcataaaatat 25340946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 1149135 - 1149091
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  1149135 tcctcgtgagcttagctcagttggtaaggacaatgcataatatat 1149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 1757735 - 1757691
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||| ||||||||||||||||||    
T  1757735 tcctcgtgagcttaactcagttggtaggaacaatgcataatatat 1757691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 4332733 - 4332689
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||| ||||||||||||||    
T  4332733 tcctcgtgagcttagctcagttggtttgaataatgcataatatat 4332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 16980420 - 16980376
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  16980420 tcctcgtgagcttagctcagttggtaaggacaatgcataatatat 16980376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 18870791 - 18870747
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||    
T  18870791 tcctcgtgagcttagctcagttggtagggacaatgcataatatat 18870747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 21331483 - 21331439
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  21331483 tcctcgtgagcttagctcagttgttatggacaatgcataatatat 21331439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 21506824 - 21506780
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  21506824 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 21506780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 28244170 - 28244126
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||    
T  28244170 tcctcgtgagcttaactcagttggtatgaacaatgcataaaatat 28244126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 29631181 - 29631225
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||    
T  29631181 tcctcatgagcttagctcagttggtatggacaatgcataatatat 29631225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 32632316 - 32632360
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||| |||||||  |||| |||||||||||||||||    
T  32632316 tcctcgtgagctttgctcagttggtataaacaatgcataatatat 32632360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 33223863 - 33223907
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  |||  |||||||||||||||||    
T  33223863 tcctcgtgagcttagctcagttggtagaaacaatgcataatatat 33223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 39481131 - 39481175
Alignment:
Q  287 gtatctcctcgtgagcttagctcagtatgtatgaacaatgcataa 331  Q
    |||| |||||||||||||||||||||  ||||| |||||||||||    
T  39481131 gtatgtcctcgtgagcttagctcagttggtatggacaatgcataa 39481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 43345073 - 43345029
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  43345073 tcctcgtgagtttagctcagttggtatgaacaatacataatatat 43345029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 44579631 - 44579675
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  44579631 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 44579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 53996294 - 53996338
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||||||||||||||||  ||||| ||||||||||||||||    
T  53996294 tccttgtgagcttagctcagttggtatggacaatgcataatatat 53996338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 9517075 - 9517029
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  9517075 tcctcgtgagattagctcagttggtatgaacaatgcataatatatac 9517029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 7201502 - 7201546
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||||||||||||||||||    
T  7201502 tcctcgtgagcttagctcagttggtttgaacaatgcataatatat 7201546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 9383275 - 9383231
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||    
T  9383275 tcctcgtgagcttagctcagttggtatggacaatgcataatatat 9383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 17736788 - 17736832
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  17736788 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 17736832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 44526123 - 44526166
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatata 335  Q
    |||||||||||||||||||||  ||||| |||||||||||||||    
T  44526123 tcctcgtgagcttagctcagttggtatggacaatgcataatata 44526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 19967413 - 19967455
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatat 334  Q
    |||||||||||||||||||||   |||||||||||||||||||    
T  19967413 tcctcgtgagcttagctcagttgatatgaacaatgcataatat 19967455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 346190 - 346146
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||| ||||||||||||||    
T  346190 tcctcgtgagcttagctcagttggtttgaataatgcataatatat 346146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 2256966 - 2257010
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  2256966 tcctcgtgagcttaactcagttggtatggacaatgcataatatat 2257010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 3196555 - 3196599
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||| |||||||   |||||||||||||||||||||    
T  3196555 tcctcgtgagctttgctcagttgatatgaacaatgcataatatat 3196599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 4122079 - 4122035
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||   ||||| ||||||||||||||||    
T  4122079 tcctcgtgagcttagctcagctggtatggacaatgcataatatat 4122035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 4238754 - 4238798
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||||||||||||||||  ||||| ||||||||||||||||    
T  4238754 tccttgtgagcttagctcagttagtatggacaatgcataatatat 4238798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 8091224 - 8091180
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  8091224 tccttgtgagcttatctcagtaggtatggacaatgcataatatat 8091180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 13196695 - 13196739
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||    
T  13196695 tcctcgtgaacttaactcagttggtatgaacaatgcataatatat 13196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 16877119 - 16877163
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||   ||||| ||||||||||||||||    
T  16877119 tcctcgtgagcttagctcagctggtatggacaatgcataatatat 16877163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 16989250 - 16989294
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||||   ||||| ||||||||||||||||    
T  16989250 tcctcgtgagcttagctcagctggtatggacaatgcataatatat 16989294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 20120172 - 20120204
Alignment:
Q  256 agatactttgtggctcattttagatactattgt 288  Q
    ||||||||||||||||||| |||||||||||||    
T  20120172 agatactttgtggctcattgtagatactattgt 20120204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 20455886 - 20455930
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||| |  ||||| ||||||||||||||||    
T  20455886 tcctcgtgagcttagctcaattggtatggacaatgcataatatat 20455930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 20517017 - 20517061
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||    
T  20517017 tcctcgtgagtttagctcagttggtaagaacaatgcataatatat 20517061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 22523078 - 22523034
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||| ||||||||||    
T  22523078 tcctcgtgagcttagctcagttggtatggacaatacataatatat 22523034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 32204539 - 32204583
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||| |  | ||||||||||||||||||||    
T  32204539 tcctcgtgagcttagctcaattggcatgaacaatgcataatatat 32204583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 33063981 - 33064025
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   |||| ||||||||||||||||    
T  33063981 tcctcgtgagcttagctcagttgatatggacaatgcataatatat 33064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 34977199 - 34977243
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  34977199 tcctcgtgagcttaactcagttggtatggacaatgcataatatat 34977243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 40365472 - 40365428
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  40365472 tcctcgtgagcttagctcagttggtatgtacaatgcataaaatat 40365428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 40546311 - 40546355
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||   || ||||||||||||||||||    
T  40546311 tcctcgtgagcttagctcagttaataagaacaatgcataatatat 40546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 40896573 - 40896529
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatatac 338  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||    
T  40896573 ctcgtgagcttagctcagttggtatagacaatgcataatatatac 40896529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 41668658 - 41668694
Alignment:
Q  300 agcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||  ||||||||||||||||||||||    
T  41668658 agcttagctcagttggtatgaacaatgcataatatat 41668694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 5420 - 5464
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    
T  5420 tcctcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 39995 - 40037
Alignment:
Q  294 ctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  39995 ctcgtgagcttagctcagttggtatggacaatgcataatatat 40037  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 223740 - 223699
Alignment:
Q  295 tcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    ||||||||||||||||||  || |||||||||||||||||||    
T  223740 tcgtgagcttagctcagttagtttgaacaatgcataatatat 223699  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 56779 - 56823
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| |||||| |||||||||    
T  56779 tcctcgtgagcttagctcagttggtatggacaatgtataatatat 56823  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 118814 - 118858
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  || |||||||||||||| ||||    
T  118814 tcctcgtgagcttagctcagttggtttgaacaatgcataaaatat 118858  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 185258 - 185302
Alignment:
Q  292 tcctcgtgagcttagctcagtatgtatgaacaatgcataatatat 336  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||    
T  185258 tcctcgtgagcttagctcagttggtatggacaatgcataaaatat 185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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