View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18197_high_20 (Length: 263)
Name: NF18197_high_20
Description: NF18197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18197_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 7198407 - 7198166
Alignment:
| Q |
10 |
catcatcacattttcttgggtattgcttcaaagttttaatacatgttcttgtttaacgagtaatcaaatatgaacatcaaaggcagggagttgctaacct |
109 |
Q |
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| T |
7198407 |
catcaacacattttcttgggtattgcttcaaagttttaatacatgttcttgtttaacgagtaatcaaatatgaacatcaagggcagggagttgctaacct |
7198308 |
T |
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| Q |
110 |
ctgatgctcaatctgtgttgggaagagactgagaagaacggaaaaggtgagtcacaaacaatacttttatgccattgttaacatttagatttatttttca |
209 |
Q |
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| T |
7198307 |
ctgatgctcaatctgtgttgggaagagactgagaagaacggaaaaggtgagtcacaaacaatacttttatgccattgttaacatttagatttatttttca |
7198208 |
T |
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| Q |
210 |
ttgttttctataccagaaaactttggacaattaccttgatga |
251 |
Q |
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| T |
7198207 |
ttgttttctataccagaaaactttggacaattaccttgatga |
7198166 |
T |
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