View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18197_high_25 (Length: 237)
Name: NF18197_high_25
Description: NF18197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18197_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 36502443 - 36502657
Alignment:
| Q |
17 |
cgcctcagttgtatatgacggtgctctttgcaatatcaagactcacatcaggggg-tggcaaggcaagt-gcccataaggcataaacatctaatgataaa |
114 |
Q |
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| T |
36502443 |
cgcctcagttgtatatgaccgtgccctttgcaatatcaagactcacatcaggggggtggcaaggcaaaaagcccataaggcataaacatctaatgataaa |
36502542 |
T |
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| Q |
115 |
aagaaaaatctccacagagcaacactaatgaaaattgaagaatgcattacctcctcaggtgaaagaaaacgtgtataaggatcgcccaaactggccagca |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36502543 |
aagaaaaatctccacagagcaacactaatgaaaattgaagaatgcattacctcctcaggtgaaagaaaacgtgtataaggatcgcccaaactggccagca |
36502642 |
T |
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| Q |
215 |
ttcgcttgatgatgt |
229 |
Q |
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||||||||||||||| |
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| T |
36502643 |
ttcgcttgatgatgt |
36502657 |
T |
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