View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18198_high_1 (Length: 692)

Name: NF18198_high_1
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18198_high_1
NF18198_high_1
[»] chr5 (13 HSPs)
chr5 (375-502)||(41250586-41250713)
chr5 (1-198)||(41250896-41251094)
chr5 (150-252)||(7452918-7453020)
chr5 (278-363)||(41250757-41250842)
chr5 (150-253)||(18593572-18593675)
chr5 (150-252)||(698697-698799)
chr5 (150-253)||(29087808-29087904)
chr5 (556-612)||(41250471-41250527)
chr5 (162-252)||(18313303-18313393)
chr5 (150-252)||(34378429-34378531)
chr5 (150-253)||(7161662-7161765)
chr5 (150-245)||(5656749-5656844)
chr5 (159-253)||(18255098-18255192)
[»] chr8 (23 HSPs)
chr8 (150-248)||(16457128-16457226)
chr8 (150-252)||(9519836-9519938)
chr8 (150-252)||(12897925-12898027)
chr8 (150-252)||(22773951-22774053)
chr8 (150-252)||(20138756-20138858)
chr8 (150-252)||(31207011-31207113)
chr8 (154-253)||(15821025-15821123)
chr8 (150-252)||(32065934-32066035)
chr8 (150-248)||(37986508-37986606)
chr8 (150-252)||(24995044-24995146)
chr8 (150-252)||(36631153-36631254)
chr8 (157-249)||(35815896-35815988)
chr8 (150-221)||(27889176-27889247)
chr8 (150-221)||(27947834-27947905)
chr8 (150-251)||(35821585-35821685)
chr8 (154-252)||(3584071-3584170)
chr8 (150-194)||(41893112-41893156)
chr8 (150-197)||(34388711-34388758)
chr8 (159-253)||(13538324-13538418)
chr8 (159-253)||(13686056-13686150)
chr8 (192-253)||(9659474-9659535)
chr8 (154-197)||(10837941-10837984)
chr8 (165-246)||(38577441-38577522)
[»] chr7 (23 HSPs)
chr7 (150-253)||(31971783-31971886)
chr7 (150-253)||(5859931-5860034)
chr7 (150-252)||(10244510-10244612)
chr7 (150-252)||(47325534-47325636)
chr7 (150-253)||(42454382-42454485)
chr7 (150-252)||(44353213-44353315)
chr7 (158-251)||(3867453-3867545)
chr7 (150-252)||(25161138-25161240)
chr7 (150-252)||(33434480-33434582)
chr7 (150-252)||(3419048-3419148)
chr7 (150-213)||(38306590-38306653)
chr7 (154-252)||(6585220-6585318)
chr7 (150-251)||(41089396-41089494)
chr7 (151-252)||(48161690-48161790)
chr7 (154-252)||(34391516-34391614)
chr7 (150-250)||(37795326-37795426)
chr7 (150-250)||(37795654-37795754)
chr7 (155-250)||(11378772-11378866)
chr7 (150-238)||(3419321-3419407)
chr7 (150-247)||(43482235-43482331)
chr7 (190-252)||(40726140-40726202)
chr7 (150-203)||(40726203-40726256)
chr7 (178-252)||(35745481-35745555)
[»] chr3 (22 HSPs)
chr3 (150-252)||(2392152-2392254)
chr3 (150-252)||(2393915-2394017)
chr3 (150-252)||(45164183-45164285)
chr3 (150-253)||(47236028-47236131)
chr3 (150-252)||(19176836-19176938)
chr3 (151-252)||(21343678-21343779)
chr3 (150-253)||(31483210-31483313)
chr3 (154-246)||(40023224-40023316)
chr3 (151-253)||(34475406-34475508)
chr3 (150-222)||(30352118-30352190)
chr3 (154-252)||(23327997-23328095)
chr3 (156-253)||(50305222-50305319)
chr3 (150-245)||(17551287-17551382)
chr3 (150-225)||(43012707-43012782)
chr3 (150-252)||(53248230-53248332)
chr3 (150-213)||(9583741-9583804)
chr3 (157-252)||(25506719-25506814)
chr3 (154-252)||(45399119-45399217)
chr3 (155-252)||(4463734-4463831)
chr3 (154-246)||(50559978-50560070)
chr3 (174-250)||(37158660-37158735)
chr3 (189-252)||(47439284-47439347)
[»] chr1 (15 HSPs)
chr1 (150-252)||(30685573-30685675)
chr1 (150-253)||(31584688-31584790)
chr1 (154-245)||(46814121-46814212)
chr1 (150-252)||(40216155-40216257)
chr1 (150-252)||(6804868-6804969)
chr1 (150-252)||(7002517-7002619)
chr1 (150-253)||(24449579-24449681)
chr1 (150-253)||(41920787-41920890)
chr1 (150-222)||(5459490-5459562)
chr1 (150-253)||(24684141-24684243)
chr1 (155-252)||(14320658-14320755)
chr1 (154-203)||(24659264-24659313)
chr1 (150-213)||(5389111-5389174)
chr1 (157-246)||(27031496-27031585)
chr1 (150-198)||(46692522-46692570)
[»] chr4 (19 HSPs)
chr4 (150-253)||(35329337-35329440)
chr4 (150-253)||(30964767-30964870)
chr4 (155-252)||(46698428-46698525)
chr4 (150-252)||(8705789-8705891)
chr4 (151-252)||(7703018-7703118)
chr4 (155-248)||(49528421-49528514)
chr4 (157-253)||(2826118-2826214)
chr4 (150-252)||(27555579-27555682)
chr4 (150-253)||(4306035-4306137)
chr4 (157-246)||(35341006-35341097)
chr4 (154-221)||(52868792-52868859)
chr4 (150-252)||(8255357-8255459)
chr4 (150-252)||(8268775-8268877)
chr4 (154-247)||(31050315-31050408)
chr4 (150-198)||(20464919-20464967)
chr4 (169-252)||(9750116-9750198)
chr4 (150-252)||(36689454-36689556)
chr4 (150-251)||(11281375-11281476)
chr4 (150-252)||(30167212-30167316)
[»] chr6 (7 HSPs)
chr6 (150-248)||(3117824-3117922)
chr6 (150-252)||(3254287-3254389)
chr6 (150-252)||(15944329-15944431)
chr6 (155-209)||(33697789-33697843)
chr6 (150-253)||(10542161-10542263)
chr6 (168-253)||(15132488-15132573)
chr6 (179-247)||(14663414-14663480)
[»] scaffold0172 (1 HSPs)
scaffold0172 (157-251)||(19255-19349)
[»] chr2 (19 HSPs)
chr2 (158-252)||(14436916-14437010)
chr2 (151-252)||(14405530-14405630)
chr2 (150-252)||(10524428-10524529)
chr2 (157-253)||(5254590-5254685)
chr2 (153-252)||(39338510-39338609)
chr2 (150-252)||(387506-387608)
chr2 (157-253)||(43816095-43816191)
chr2 (155-253)||(3745676-3745774)
chr2 (154-236)||(17116553-17116635)
chr2 (153-246)||(41877207-41877300)
chr2 (154-252)||(14106172-14106269)
chr2 (156-245)||(13512495-13512584)
chr2 (154-198)||(7874610-7874654)
chr2 (175-251)||(15457817-15457893)
chr2 (154-252)||(7461010-7461107)
chr2 (155-253)||(45311452-45311550)
chr2 (157-246)||(43248882-43248971)
chr2 (169-238)||(7455601-7455669)
chr2 (155-184)||(15457278-15457307)
[»] scaffold0434 (1 HSPs)
scaffold0434 (150-221)||(2353-2424)
[»] scaffold0085 (1 HSPs)
scaffold0085 (150-252)||(48665-48767)
[»] scaffold0343 (1 HSPs)
scaffold0343 (150-246)||(6035-6131)
[»] scaffold0068 (1 HSPs)
scaffold0068 (200-253)||(35472-35525)


Alignment Details
Target: chr5 (Bit Score: 128; Significance: 8e-66; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 375 - 502
Target Start/End: Complemental strand, 41250713 - 41250586
Alignment:
Q  375 gatcatgggggatgctatagaatctattgtcgatcatgtgaataattaccagataagcgtggtaaaattgccaaccgagtaataattaaaattaaaaaag 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41250713 gatcatgggggatgctatagaatctattgtcgatcatgtgaataattaccagataagcgtggtaaaattgccaaccgagtaataattaaaattaaaaaag 41250614  T
Q  475 ttttgactttttacatgtattaagacaa 502  Q
    ||||||||||||||||||||||||||||    
T  41250613 ttttgactttttacatgtattaagacaa 41250586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 41251094 - 41250896
Alignment:
Q  1 gcaaattaaagccaacttgttcttatcacatgttccttcgtgtttgcataaatccatgcaaaccaaaagttaaggccataatcacaagagtctccaaacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41251094 gcaaattaaagccaacttgttcttatcacatgttccttcgtgtttgcataaatccatgcaaaccaaaagataagaccataatcacaagagtctccaaacc 41250995  T
Q  101 aaaa-nnnnnnnnnnnnnnnnnnataatgaaaacaaataaattaataatatttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 198  Q
    ||||                   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  41250994 aaaattttgatttttctttttttataatgaaaacaaataaattaataatatttacgtggttatggtgtaccgtctatatgcggcaccatttatatcttg 41250896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 7452918 - 7453020
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  7452918 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgatttgtccataccttgcgtcttgcatggatgatgtttaataatatttgccg 7453017  T
Q  250 att 252  Q
    |||    
T  7453018 att 7453020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 41250842 - 41250757
Alignment:
Q  278 cattatcaggtggtgattaactgacttaaaaccaaggacgaatactaatgaatcttcaagataatgaaaatggtgttatatatata 363  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41250842 cattatcgggtggtgattaactgacttaaaaccaaggacgaatactaatgaatcttcaagaaaatgaaaatggtgttttatatata 41250757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 18593572 - 18593675
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||| | |||||| ||||||| ||||||| ||||||||||    
T  18593572 tttaggtggttatggtgtaccgtctatatgcggcaccatatttatcttgtttcgtccataccttgcatcttgcggggatgacgtttaataatatttgccg 18593671  T
Q  250 attc 253  Q
    ||||    
T  18593672 attc 18593675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 698697 - 698799
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |  |||  |||||||||||||||||||| ||||  ||||||| |||||||| |    
T  698697 tttaggtggttatagtgtaccgtctatatgcggcaccatttgtatcatatttcatccataccttacgtcttgcagagatgtcgtttaataatatttgctg 698796  T
Q  250 att 252  Q
    |||    
T  698797 att 698799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 29087808 - 29087904
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||       ||||||||||||| ||||||| |||||| |||    
T  29087808 tttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatac-------cttgcagggatgacgtttaataatattttccg 29087900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 41250527 - 41250471
Alignment:
Q  556 atcaagccaagactaagaaataaaataaacctgatttccctccttttaaatttaaat 612  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41250527 atcaaggcaagactaagaaataaaataaacctgatttccctccttttaaatttaaat 41250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 18313393 - 18313303
Alignment:
Q  162 tggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||| |||||| |||  ||||||||| |||||| |||| |||| ||||||| |||||| ||||||    
T  18313393 tggtgtaccgtctatatgcggcaccatttgcatcttgtttcatccataccttgcgtcttacaggaatgacgtttaataatatttaccgatt 18313303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 34378429 - 34378531
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |  ||| |||| |||| |||||||| | ||||  ||||||| ||||||| ||    
T  34378429 tttagatggttatggtgtaccgtctatatgcggcaccatttgtatctcgtctcgtccatgccttgcgtcttgcggagatggcgtttaataatatttgtcg 34378528  T
Q  250 att 252  Q
    |||    
T  34378529 att 34378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 7161765 - 7161662
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||  |||| ||||| ||| |||||||  |||| || ||||||| ||||||||||    
T  7161765 tttaggtgattatggtgtaccgtctatatgctacactatttgtatcttatttcgtccatatcttgcgtcttgtggggaagacgtttaataatatttgccg 7161666  T
Q  250 attc 253  Q
    ||||    
T  7161665 attc 7161662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 5656844 - 5656749
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 245  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||  ||||  |||||||| |||||||| | ||||  ||||||| ||||||    
T  5656844 tttaggtggttatcatgtaccgtctatatgcggcatcatttgtatcttatttcgttcataccttgcgtcttgcggtgatggcgtttaataatattt 5656749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 18255192 - 18255098
Alignment:
Q  159 ttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||| | ||||| | | |||| | ||||| | ||||||  ||||||||||||||    
T  18255192 ttatgatgtaccgtctatatgcggcactatttgtatcttgtttcgtctataccctgcatcttacggggataacgtttaacaatatttgccgattc 18255098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 16457226 - 16457128
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 248  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  16457226 tttaggtggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccataccttacgtcttgcagggatgacgtttaataatatttgcc 16457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 9519836 - 9519938
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| |||||||| ||||||| ||    
T  9519836 tttaggtggttatgatgtactgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgtagggatggtgtttaataatatttgtcg 9519935  T
Q  250 att 252  Q
    |||    
T  9519936 att 9519938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 12898027 - 12897925
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||| | |||||| ||||||| ||||||| ||||||||||    
T  12898027 tttaggtggtaatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatatcttgcatcttgcggggatgacgtttaataatatttgccg 12897928  T
Q  250 att 252  Q
    |||    
T  12897927 att 12897925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 22773951 - 22774053
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||  ||||||| ||||||||||    
T  22773951 tttagatggttatggtgtaccgtctatatgcggcaccatttgtatctagtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccg 22774050  T
Q  250 att 252  Q
    |||    
T  22774051 att 22774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 20138756 - 20138858
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| |||    
T  20138756 tttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccg 20138855  T
Q  250 att 252  Q
    |||    
T  20138856 att 20138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 31207113 - 31207011
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||| ||||||||  |||||  ||||||| ||||||||||    
T  31207113 tttaggtggttatggtgtaccgtttatatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcgaggatggcgtttaataatatttgccg 31207014  T
Q  250 att 252  Q
    |||    
T  31207013 att 31207011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 15821123 - 15821025
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | || ||||||||| ||||||||| |||||| ||||||| |||||||| |||||    
T  15821123 ggtggttatggtataccgtctatatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgca-ggatgacgtttaataatatttgctgattc 15821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 32066035 - 32065934
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||| | ||||  ||||||| ||||||||||    
T  32066035 tttaggtggttatg-tgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcatcttgcggtgatggcgtttaataatatttgccg 32065937  T
Q  250 att 252  Q
    |||    
T  32065936 att 32065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 37986606 - 37986508
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 248  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || | |||| |||||||| |||||||  |||||| |||||||||    
T  37986606 tttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccgtgccttgcgtcttgcggggatgacatttaataatatttgcc 37986508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 24995146 - 24995044
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||| |||||| | ||||||  ||| ||| |||||||| |    
T  24995146 tttaggtggttatggtgtactgtctataagcggcaccatttgtatcttgtttcgtccataccttgcgtcttacggggatggcgttcaataatatttgctg 24995047  T
Q  250 att 252  Q
    |||    
T  24995046 att 24995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 36631153 - 36631254
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||   |||||||| |||||||||||||||  || |||| |||||| |||    
T  36631153 tttaggtgattatggtgtaccgtctatatgcggcaccatttgtatcttgtttc-ttcataccttgcgtcttgcagggatggcgtataataatattttccg 36631251  T
Q  250 att 252  Q
    |||    
T  36631252 att 36631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 35815988 - 35815896
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||| ||| ||||  |||||  ||||||| ||||||||||    
T  35815988 ggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccataccttgcgttttgcgaggatggcgtttaataatatttgccg 35815896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27889176 - 27889247
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttg 221  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27889176 tttaggtggttatggtgtacagtctatatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27889247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 27947834 - 27947905
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttg 221  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27947834 tttaggtggttatggtgtacagtctatatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27947905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 35821585 - 35821685
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| || |||| |||| |||| |||||||| | ||||  ||||||| ||||||||||    
T  35821585 tttaagtggttatggtgtaccgtctatatgcggcatcatttgtatcatgtttcgtccat-ccttgcgtcttgcggagatggcgtttaataatatttgccg 35821683  T
Q  250 at 251  Q
    ||    
T  35821684 at 35821685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 3584071 - 3584170
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatc-ttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||  |||||||  ||||||  ||||||| |||||||| ||||    
T  3584071 ggtggttatggtgtaccgtctatatgcggcaccatttgtatctttgtttcgttcatacctcgcgtcttgtggggatggcgtttaataatatttgctgatt 3584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 41893156 - 41893112
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtat 194  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  41893156 tttaggtggttatggtgtaccgtctatatgcgacaccatttgtat 41893112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 34388758 - 34388711
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatctt 197  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34388758 tttaggtggttatggtgtaccgtctatatgcagcactatttgtatctt 34388711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 13538324 - 13538418
Alignment:
Q  159 ttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||| |||||||||||||||||| ||||||||||| ||  |||| ||||||||| |||||||  | ||||  ||||||| |||||||| |||||    
T  13538324 ttatgatgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatatttgctgattc 13538418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 13686150 - 13686056
Alignment:
Q  159 ttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||| |||||||||||||||||| ||||||||||| ||  |||| ||||||||| |||||||  | ||||  ||||||| |||||||| |||||    
T  13686150 ttatgatgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatatttgctgattc 13686056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 9659474 - 9659535
Alignment:
Q  192 tatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  9659474 tatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgattc 9659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 10837984 - 10837941
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatctt 197  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  10837984 ggtggttatggtgtaccgtctatatgcggcacgatttgcatctt 10837941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 38577522 - 38577441
Alignment:
Q  165 tgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    |||||||||||||||||||| ||||||||| ||| ||||  ||||| |||| |||||| |  |||| ||||||| |||||||    
T  38577522 tgtaccgtctatatgcggcatcatttgtatattgtttcgttcatacattacatcttgcggaaatgacgtttaataatatttg 38577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 9e-35; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 31971886 - 31971783
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| ||||||||||    
T  31971886 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccg 31971787  T
Q  250 attc 253  Q
    ||||    
T  31971786 attc 31971783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 5860034 - 5859931
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| ||||||| ||||||||||    
T  5860034 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaataatatttgccg 5859935  T
Q  250 attc 253  Q
    ||||    
T  5859934 attc 5859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 10244510 - 10244612
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||  ||||||| ||||||||||    
T  10244510 tttaggtggttatggtgtactgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggagatggagtttaataatatttgccg 10244609  T
Q  250 att 252  Q
    |||    
T  10244610 att 10244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 47325636 - 47325534
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||| |  |||||| ||||||| ||||||||||    
T  47325636 tttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttacgaggatgacgtttaataatatttgccg 47325537  T
Q  250 att 252  Q
    |||    
T  47325536 att 47325534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 42454485 - 42454382
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||| |||| | ||| ||| |||||||| ||||||||||||||| |||||||| |    
T  42454485 tttaggtggttatggtgtactgtctatatgcggcaccatttgtaccttgtttcgtctatatcttgcgtcttgcggggatgatgtttaataatatttgctg 42454386  T
Q  250 attc 253  Q
    ||||    
T  42454385 attc 42454382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 44353315 - 44353213
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| |||    
T  44353315 tttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccg 44353216  T
Q  250 att 252  Q
    |||    
T  44353215 att 44353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 3867453 - 3867545
Alignment:
Q  158 gttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 251  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  3867453 gttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtcaataccttacgtcttgc-gggatgaagtttaataatatttgccgat 3867545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 25161138 - 25161240
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||  |||||||||  |||| | ||||||| ||||||| ||||||||||    
T  25161138 tttaggtggttatggtgtaccgtctatatacggcaccatttgcatcttgtttcgttcataccttaaatcttacggggatgacgtttaataatatttgccg 25161237  T
Q  250 att 252  Q
    |||    
T  25161238 att 25161240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 33434582 - 33434480
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||| |||| ||||||||| ||| |||| ||||||  ||||||| ||||||||||    
T  33434582 tttaggtggttatggtgtaccgtctatatacagaaccatttgtatcttgcttcgtccataccttgcgtattgcggggatggcgtttaataatatttgccg 33434483  T
Q  250 att 252  Q
    |||    
T  33434482 att 33434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 3419148 - 3419048
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||| ||    
T  3419148 tttaggtggttatggtgtaccgtctat--gcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgtcg 3419051  T
Q  250 att 252  Q
    |||    
T  3419050 att 3419048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 38306590 - 38306653
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccatacctt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  38306590 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatacctt 38306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 6585220 - 6585318
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||| |||| | |||||| ||||||  ||||||| |||||||| ||||    
T  6585220 ggtggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccattccttgcatcttgcggggatggcgtttaataatatttgctgatt 6585318  T

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Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 41089494 - 41089396
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||  ||||||||| ||||   |||||| ||||||||||    
T  41089494 tttaggtggttatggtgtaccgtctatatgcggcacca-ttgtatcttgtttcgtccatacctt--gtcttgcagagatggcatttaataatatttgccg 41089398  T

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Target: chr7; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 48161790 - 48161690
Alignment:
Q  151 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| ||| |||| ||||| |||  ||||||||||||||| ||||||| |||||||| ||    
T  48161790 ttaggtggttatggtgtgccgtctatatgcggcactatttgtattttg-ttcgtccatatcttgtgtcttgcagggatgacgtttaataatatttgctga 48161692  T
Q  251 tt 252  Q
    ||    
T  48161691 tt 48161690  T

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Target: chr7; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 34391516 - 34391614
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||| |||||||||||||||  |||||||||||| |||| ||||||| | |||| ||| ||||||| ||||||| |||||||| ||||    
T  34391516 ggtggttatggtgtatcgtctatatgcggcattatttgtatcttgtttcgtccataccctgcgtcctgcggggatgacgtttaataatatttgctgatt 34391614  T

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Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 37795326 - 37795426
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||| ||   ||| |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| ||||||||||    
T  37795326 tttaggtggttatggtgtaccgtttaatcgcgacaccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccg 37795425  T
Q  250 a 250  Q
    |    
T  37795426 a 37795426  T

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Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 37795654 - 37795754
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||| ||   ||| |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| ||||||||||    
T  37795654 tttaggtggttatggtgtaccgtttaatcgcgacaccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccg 37795753  T
Q  250 a 250  Q
    |    
T  37795754 a 37795754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 11378866 - 11378772
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||| |||||||| ||| ||  ||||||| |||||||||||    
T  11378866 gtggttatggtgtaccgtttatatgcggcatcatctgtatctt-attcgtccataccttgcgtcttgcggggttggcgtttaataatatttgccga 11378772  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 3419407 - 3419321
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaat 238  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||| |||| ||||||||| |||||||| ||||||  |||||||    
T  3419407 tttaggtggttatggtgtaccgtctat--gcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaat 3419321  T

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Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 43482235 - 43482331
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 247  Q
    ||||||||||| ||||||||||||| ||||| |||| |||||||||||  |||| ||||||||| |||| | | ||||||| ||||||| ||||||||    
T  43482235 tttaggtggttgtggtgtaccgtctgtatgcagcactatttgtatcttatttcgtccataccttgcgtc-tacggggatgacgtttaataatatttgc 43482331  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 40726202 - 40726140
Alignment:
Q  190 tgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||| |||| ||||||||| |||||||| |||||||  |||||| |||||||||||||    
T  40726202 tgtatcttgtttcgtccataccttgcgtcttgcggggatgacatttaataatatttgccgatt 40726140  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 40726256 - 40726203
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcg 203  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||| ||| ||||    
T  40726256 tttaggtggttatggtgtaccgtctatatgtagcatcatttgtattttgtttcg 40726203  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 35745555 - 35745481
Alignment:
Q  178 tgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||| |||||||||||||||| |||| ||||||||| ||| || | | ||||| ||||||| |||||||| ||||    
T  35745555 tgcgacaccatttgtatcttgtttcgtccataccttgcgttttacggagatgacgtttaataatatttgctgatt 35745481  T

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Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 2392254 - 2392152
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| |||    
T  2392254 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccg 2392155  T
Q  250 att 252  Q
    |||    
T  2392154 att 2392152  T

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Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 2394017 - 2393915
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| |||    
T  2394017 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccg 2393918  T
Q  250 att 252  Q
    |||    
T  2393917 att 2393915  T

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Target: chr3; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 45164183 - 45164285
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |||||| ||||| ||||||||| ||||||||||    
T  45164183 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttagtccataccttgcatcttgcggggataatgtttaataatatttgccg 45164282  T
Q  250 att 252  Q
    |||    
T  45164283 att 45164285  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 47236028 - 47236131
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||  ||||||| |||||||| |    
T  47236028 tttagatggttatggtataccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcagggatggcgtttaataatatttgctg 47236127  T
Q  250 attc 253  Q
    ||||    
T  47236128 attc 47236131  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 19176836 - 19176938
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || |||| |||||| || ||||||||||| |||| ||||||| ||||||||||    
T  19176836 tttaggtcgttatggtgtaccgtctatatgcggcaccatttgtatcatgtttcgtccatactttgcgtcttgcaggaatgacgtttaataatatttgccg 19176935  T
Q  250 att 252  Q
    |||    
T  19176936 att 19176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 21343678 - 21343779
Alignment:
Q  151 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||  ||||||| ||||||| ||||||| ||||||| |||    
T  21343678 ttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgtgtcttgccgggatgacgtttaataatatttgtcga 21343777  T
Q  251 tt 252  Q
    ||    
T  21343778 tt 21343779  T

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Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 31483210 - 31483313
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || |  |||||||| |||||||  |||||| |||||||| ||||||||||    
T  31483210 tttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgttttgttcataccttgcgtcttgtggggatggtgtttaataatatttgccg 31483309  T
Q  250 attc 253  Q
    ||||    
T  31483310 attc 31483313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 40023316 - 40023224
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||  | |||||||| ||||||||||||||| |||||||    
T  40023316 ggtggttatggtgtaccgtctatatgcggcatcatttgtatcttgtttcgtccatacaatgcgtcttgcggggatgatgtttaataatatttg 40023224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 34475508 - 34475406
Alignment:
Q  151 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||  |||||| | |||||||| ||||||| ||||||| |||| ||||||    
T  34475508 ttaggtggttatggtataccgtctatatggggcaccatttgtatcttgtttcgttcataccctgcgtcttgcggggatgacgtttaataatatgtgccga 34475409  T
Q  251 ttc 253  Q
    |||    
T  34475408 ttc 34475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 30352190 - 30352118
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgc 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  30352190 tttaggtggttatggtgtaccttctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgc 30352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 23328095 - 23327997
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||| ||| ||||||||||   ||||||| |||||||| ||||    
T  23328095 ggtggttatggtgtaccgtatatatgcggcaccatttatatcttgtttcgtccataccttgcgtattgcagggatagcgtttaataatatttgctgatt 23327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 50305319 - 50305222
Alignment:
Q  156 tggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    |||||||||||||||||||||||||| |||||||||||||||| | || ||||||||| |||||||| || |||  ||||||| |||||||| |||||    
T  50305319 tggttatggtgtaccgtctatatgcgacaccatttgtatcttgttccgtccataccttgcgtcttgcgggaatggcgtttaataatatttgctgattc 50305222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 17551287 - 17551382
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 245  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| ||||  |||||| | | |||||||||||| | ||||||| ||||||    
T  17551287 tttaggtggttatggtgtacagtctatatgcggcaccatttgtattttgtttcgttcataccctgcatcttgcagggataacgtttaataatattt 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 43012707 - 43012782
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagg 225  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||  |||||||| |||||||||||    
T  43012707 tttaggtggttatggtgtatcgtctatatgcggcaccatttgtatattgtttcgttcataccttgcgtcttgcagg 43012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 53248230 - 53248332
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||| ||||||||||||||   ||||||||| |||||||||||||||| || | |||||||||||| ||||| ||||||| ||||||| ||||||| ||    
T  53248230 tttagatggttatggtgtacaacctatatgcgacaccatttgtatcttgttttgtccataccttacgccttgcggggatgacgtttaataatatttgtcg 53248329  T
Q  250 att 252  Q
    |||    
T  53248330 att 53248332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 9583804 - 9583741
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccatacctt 213  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||    
T  9583804 tttaggtggttatggtgtatcgtctatatgcggcaccatttgtatcttgtttcgtctatacctt 9583741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 25506814 - 25506719
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |   ||| |||  ||||||| ||||||||||||||| ||||||| |||||    
T  25506814 ggttatggtgtaccgtctatatgcggcaccatttgtatattgttttgtttatatcttgggtcttgcggggatgatgtttaataatatttgtcgatt 25506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 45399119 - 45399217
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||  |||||| | | ||||  ||||||| |||||||| ||||    
T  45399119 ggtggttatggtgtaccgtctatatgcggcaccgtttgtatcttgtttcgttcatacctcgcgtctttcggagatgtcgtttaataatatttgctgatt 45399217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 4463831 - 4463734
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||| ||||||||||||||||||||||||| | ||| |||| ||||  ||| |||||||  ||| ||| ||||||| |||||||||||||    
T  4463831 gtggttatggtgcaccgtctatatgcggcaccatttgtgtgttgtttcgtccatgtcttgcgtcttgtggggttgacgtttaataatatttgccgatt 4463734  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 50559978 - 50560070
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    ||||||||||||| ||||||||| ||||||| | ||||||||||| |||| ||||| ||| ||| ||||  |||||| ||||||| |||||||    
T  50559978 ggtggttatggtgcaccgtctatgtgcggcatcttttgtatcttgtttcgtccatatcttgcgtattgcgaggatgacgtttaataatatttg 50560070  T

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Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 37158660 - 37158735
Alignment:
Q  174 tatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    |||||||||||||||||||||| || |||| ||||||||| |||||||| ||||||  |||| || |||||||||||    
T  37158660 tatatgcggcaccatttgtatcctgtttcgtccataccttgcgtcttgcggggatggcgttt-ataatatttgccga 37158735  T

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Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 47439284 - 47439347
Alignment:
Q  189 ttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||| |||| |||||||||| |||||| |||||||| ||||| | |||||||||||||    
T  47439284 ttgtatcttgtttcgtccataccttatgtcttgtagggatgacgtttagtaatatttgccgatt 47439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 30685675 - 30685573
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||    
T  30685675 tttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccg 30685576  T
Q  250 att 252  Q
    |||    
T  30685575 att 30685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 31584790 - 31584688
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||| ||||||||  ||||| |||||||| ||||||||||    
T  31584790 tttaggtggttatggtgtatcgtctatatgcggcaccatttgtatcttgtttc-gtcataccttgcgtcttgcgaggatggtgtttaataatatttgccg 31584692  T
Q  250 attc 253  Q
    ||||    
T  31584691 attc 31584688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 46814212 - 46814121
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  |||||  ||||||| ||||||    
T  46814212 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttacgtcttgcgaggatggcgtttaataatattt 46814121  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 40216257 - 40216155
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||  |||||| ||||||| |||||||| |    
T  40216257 tttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttgattcgtccatatctggcgtcttgcgaggatgacgtttaataatatttgctg 40216158  T
Q  250 att 252  Q
    |||    
T  40216157 att 40216155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 6804868 - 6804969
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||| |||||   ||||||| |||||| |||    
T  6804868 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatctt-tttcgtccataccttgcgtcttgcggggatagcgtttaataatatttaccg 6804966  T
Q  250 att 252  Q
    |||    
T  6804967 att 6804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 7002517 - 7002619
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||| | ||||  |||||| ||||||| ||||||||||    
T  7002517 tttaagtggttatggtgtaccgtttatatgcggcaccttttgtatcttgtttcgtccataccttacattttgcgaggatgacgtttaataatatttgccg 7002616  T
Q  250 att 252  Q
    |||    
T  7002617 att 7002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 24449681 - 24449579
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | |||||| ||||||  ||||||| |||||||||     
T  24449681 tttatgtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttgcatcttgc-gggatggcgtttaataatatttgcca 24449583  T
Q  250 attc 253  Q
    ||||    
T  24449582 attc 24449579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 41920787 - 41920890
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| ||  |||| |||||||||||||||||| | ||||| ||||||| ||||||| ||    
T  41920787 tttaggtggttacggtgtaccgtctatatgcagcacaatttgtattttatttcgtccataccttacgtcttgcggagatgacgtttaataatatttgtcg 41920886  T
Q  250 attc 253  Q
    ||||    
T  41920887 attc 41920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 5459490 - 5459562
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| ||||    
T  5459490 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatgttgcttcgtccataccttgcgtattgc 5459562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 24684243 - 24684141
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| || |  |||||||| | ||||||||||||||  | |||| ||||||||||    
T  24684243 tttaggtgattatggtgtaccgtctatatgtggcaccatttgtatcttg-tttgttcataccttgcatcttgcagggatgacatataataatatttgccg 24684145  T
Q  250 attc 253  Q
    ||||    
T  24684144 attc 24684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 14320658 - 14320755
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||||||||||||||| |||||||||||| | | || | ||||||||| | |||||  ||||||| ||||||| |||||||||||||    
T  14320658 gtggttatggtgtaccgtctatatgcgacaccatttgtatttggttttgtccataccttgcatcttgtggggatgacgtttaataatatttgccgatt 14320755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 24659264 - 24659313
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24659264 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcg 24659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 5389174 - 5389111
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccatacctt 213  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||  |||| |||||||||    
T  5389174 tttaggtggttatagtgtgccgtctatatgcggcaccatttgtatcttatttcgtccatacctt 5389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 27031585 - 27031496
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    |||||||||||||||| ||||||||||||||||| ||| ||| | || ||||| ||| ||||||||  |||||| ||||||| |||||||    
T  27031585 ggttatggtgtaccgtatatatgcggcaccatttatatattgttccgtccatatcttgcgtcttgcgaggatgacgtttaataatatttg 27031496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 46692570 - 46692522
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 198  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  46692570 tttaggtggttatggtgtaccgtctttatgcggcaccatttttatcttg 46692522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 35329337 - 35329440
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||  ||||| | ||||||||||    
T  35329337 tttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccataccttacgtcttgcggggatggcgtttactaatatttgccg 35329436  T
Q  250 attc 253  Q
    ||||    
T  35329437 attc 35329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 30964767 - 30964870
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| ||||||| ||    
T  30964767 tttaggtggttatggtgtaccgtctatatgcaacatcatttgtatcttgtttcgtccataccttgcgtcttgcagggatggtgtttaataatatttgtcg 30964866  T
Q  250 attc 253  Q
    ||||    
T  30964867 attc 30964870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 46698525 - 46698428
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||| || |||||| ||||||| |||||||| ||||    
T  46698525 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgaccataccttgcgtctttcatggatgacgtttaataatatttgctgatt 46698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 8705891 - 8705789
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||  ||| ||||||||  ||||||| |||||||| ||||||| ||||||||||    
T  8705891 tttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcctgcctcgtccatacctcgcgtcttgaagggatgacgtttaataatatttgccg 8705792  T
Q  250 att 252  Q
    |||    
T  8705791 att 8705789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 7703018 - 7703118
Alignment:
Q  151 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||  ||||||| ||||||| ||||||| |||||||||||    
T  7703018 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatctt-tttcatccataccttgtgtcttgcggggatgacgtttaataatatttgccga 7703116  T
Q  251 tt 252  Q
    ||    
T  7703117 tt 7703118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 49528421 - 49528514
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 248  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||| ||| || ||||||||||||||||||    
T  49528421 gtggttttggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttatgttttgcggggttggtgtttaatgatatttgcc 49528514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 2826118 - 2826214
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    |||||||||||||||| ||||||||||||||||||||||||| | || ||||||||| |||||||||| ||||| ||||||| |||||||| |||||    
T  2826118 ggttatggtgtaccgtatatatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgcagagatgacgtttaataatatttgctgattc 2826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 27555682 - 27555579
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgc-agggatgatgtttaatgatatttgcc 248  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||| ||||||||  ||||||  ||||||| |||||||||    
T  27555682 tttaggtggttatggtgtaccatctatatgcggcacaatttgtatcttgtttcgtccataccttgcgtcttgcgggggatggcgtttaataatatttgcc 27555583  T
Q  249 gatt 252  Q
    ||||    
T  27555582 gatt 27555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 4306035 - 4306137
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  |||||||| |||||| | |||||||  |||||| ||||||||||    
T  4306035 tttaggtggttatggtgtaccgtctatatgcggcaccatttatatctt-tttcgttcataccttgcgtcttccggggatgacatttaataatatttgccg 4306133  T
Q  250 attc 253  Q
    ||||    
T  4306134 attc 4306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 35341097 - 35341006
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgc--agggatgatgtttaatgatatttg 246  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||||| || ||||||||   ||||||| ||||||| |||||||    
T  35341097 ggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccatacattgcgtcttgcggggggatgacgtttaataatatttg 35341006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 52868859 - 52868792
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttg 221  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||  ||||||||||||||||    
T  52868859 ggtggttatggtgtaccgtctatacgcgacaccatttgtatcttaattcgttcataccttacgtcttg 52868792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 8255357 - 8255459
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||  ||| ||| ||||||  |||||| | |||   ||||||| ||||||||||    
T  8255357 tttaggtggttatgatgtaccgtctatatgcggcatcatttgtatcttgtctcgtccacaccttatatcttgcggagatagcgtttaataatatttgccg 8255456  T
Q  250 att 252  Q
    |||    
T  8255457 att 8255459  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 8268775 - 8268877
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||  ||| ||| ||||||  |||||| | |||   ||||||| ||||||||||    
T  8268775 tttaggtggttatgatgtaccgtctatatgcggcatcatttgtatcttgtctcgtccacaccttatatcttgcggagatagcgtttaataatatttgccg 8268874  T
Q  250 att 252  Q
    |||    
T  8268875 att 8268877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 31050408 - 31050315
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 247  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||| |||||| |  | |||||| |||| || ||||||| ||||||||    
T  31050408 ggtggttatggtgtaccgtctatatgcgacatcatttgtatcttgtttcgtccatacatcgcatcttgcggggacgacgtttaataatatttgc 31050315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 20464919 - 20464967
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20464919 tttaggtggttatggtgtaccgtctatatacggcaccatttgtatcttg 20464967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 9750116 - 9750198
Alignment:
Q  169 ccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||| |||| ||| ||| | |||||||| ||||||| ||||||| ||||||| |||||    
T  9750116 ccgtctatatgcggcaccatttgtatcttgtttcgtccaaacc-tgcgtcttgcggggatgacgtttaataatatttgtcgatt 9750198  T

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Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 36689556 - 36689454
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||| |||||||| ||||||||||||||||||  ||||||||||||||  |||| ||||||||  |||||||| | |||| | |||||| ||||||| ||    
T  36689556 tttaagtggttatagtgtaccgtctatatgcgataccatttgtatcttatttcgtccatacctcgcgtcttgcggagatggtatttaataatatttgtcg 36689457  T
Q  250 att 252  Q
    |||    
T  36689456 att 36689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 11281476 - 11281375
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||||||||||| |||||||||||| | ||||||||| |||| || |||| ||||| ||| |||||||  | ||||| ||| ||| ||||||||||    
T  11281476 tttaggtggttatggtataccgtctatatacagcaccatttatatcatgtttcgtccatatcttgcgtcttgtggagatgacgttcaataatatttgccg 11281377  T
Q  250 at 251  Q
    ||    
T  11281376 at 11281375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 30167316 - 30167212
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcg--gcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 247  Q
    ||||| ||||||| |||||||||||||||     ||| ||||||||||||| |||| ||||||||| ||||||||  |||||| ||||||| |||||||     
T  30167316 tttagatggttatagtgtaccgtctatattttttgcatcatttgtatcttgtttcgtccataccttgcgtcttgcgaggatgacgtttaataatatttgt 30167217  T
Q  248 cgatt 252  Q
    |||||    
T  30167216 cgatt 30167212  T

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Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 3117824 - 3117922
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 248  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  3117824 tttaggtggttatggtgtagcgtctatatgctgcaccatttgtatcttatttcgtccataccttacgtcttgcaggaatgacgtttaataatatttgcc 3117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 3254287 - 3254389
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||| ||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||    
T  3254287 tttaggtggctatggtgtactatctatatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccg 3254386  T
Q  250 att 252  Q
    |||    
T  3254387 att 3254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 15944329 - 15944431
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||  |  | ||||||||| |||||| ||||||||  ||||||| ||||||||||    
T  15944329 tttaggtgtttatggtgtaccgtctatatgcgacaccatttgtatcttcttctgtccataccttgcgtcttacagggatggcgtttaataatatttgccg 15944428  T
Q  250 att 252  Q
    |||    
T  15944429 att 15944431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 33697843 - 33697789
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccata 209  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33697843 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccata 33697789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 10542161 - 10542263
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||  |||| ||| | |||||| ||||||  | ||||| |||||| |||    
T  10542161 tttaggtggttatggtgtatcgtctatatgcggcaccttttgtatcttgtttcgttcatatcttgcatcttgc-gggatggcgcttaataatattttccg 10542259  T
Q  250 attc 253  Q
    ||||    
T  10542260 attc 10542263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 15132573 - 15132488
Alignment:
Q  168 accgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||||||||| ||||| ||||||||||||| || | ||||||||||||||||||   ||||  ||||||| |||||||| |||||    
T  15132573 accgtctatatacggcatcatttgtatcttgttttgtccataccttacgtcttgcgatgatggcgtttaataatatttgctgattc 15132488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 14663414 - 14663480
Alignment:
Q  179 gcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 247  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||||||||    
T  14663414 gcggcagcatttgtatcttg-ttcgtccatacctttcgtcttgca-ggatgacgtttaataatatttgc 14663480  T

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Target: scaffold0172 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 19255 - 19349
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 251  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||  |||||| ||||||| ||||||||||||    
T  19255 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccatgcgtcttgcgaggatgacgtttaataatatttgccgat 19349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 14437010 - 14436916
Alignment:
Q  158 gttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| |||||||| ||||    
T  14437010 gttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgctgatt 14436916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 14405530 - 14405630
Alignment:
Q  151 ttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 250  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||| || | ||||||| |||||||| ||    
T  14405530 ttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttg-ttcgttcataccttacgtcttgcaggaataacgtttaataatatttgctga 14405628  T
Q  251 tt 252  Q
    ||    
T  14405629 tt 14405630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 10524428 - 10524529
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||| ||||||||| |||||||||||| ||  ||||||| ||||||||||    
T  10524428 tttaggtggttatggtgtaccatctatatgctgcaccatttgtatattgtttcgtccataccttgcgtcttgcaggg-tggcgtttaataatatttgccg 10524526  T
Q  250 att 252  Q
    |||    
T  10524527 att 10524529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 5254590 - 5254685
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||||  |||||| ||||||| |||||||| |||||    
T  5254590 ggttatggtgtaccgtctatatgcggcaccatttgtatc-tatttcgtccataccttacgtcttgcgaggatgacgtttaataatatttgctgattc 5254685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 39338609 - 39338510
Alignment:
Q  153 aggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| || |||||| |   ||||  ||||||| |||||||||||||    
T  39338609 aggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatacattgcgtcttacgatgatggcgtttaataatatttgccgatt 39338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 387506 - 387608
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | || ||||| | ||||| ||||||| |||| || ||    
T  387506 tttaagtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccctgcgacttgcggtgatgacgtttaataatatctgtcg 387605  T
Q  250 att 252  Q
    |||    
T  387606 att 387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 43816191 - 43816095
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||| ||||||||| ||| |||| || |||| ||||||| ||||||||||||||    
T  43816191 ggttatggtgtaccgtctatatgcggcatcatttgtactttgtttcgtccataccttgcgttttgcgggaatgacgtttaataatatttgccgattc 43816095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 3745676 - 3745774
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||| ||||||   |||||||  |||||| ||||||||||||||    
T  3745676 gtggttatgatgtaccatctatatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttatggggatgacatttaataatatttgccgattc 3745774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 17116635 - 17116553
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgttta 236  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||  ||| ||||||||| |||||||| ||||||| |||||    
T  17116635 ggtggttatagtgtaccgtctatatgcggcatcatttgtatcttgtctcgtccataccttgcgtcttgcggggatgacgttta 17116553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 41877300 - 41877207
Alignment:
Q  153 aggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||| |||| ||||| ||| |||||||| ||||||  ||||||| |||||||    
T  41877300 aggtggttatggtgtaccgtctatatacggtaccatttgtatattgtttcgtccatatcttgcgtcttgcggggatggagtttaataatatttg 41877207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 14106269 - 14106172
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||| | ||||||||  |||||  ||||||| |||||||| ||||    
T  14106269 ggtggttatggtgtaccgtctatatgcggcaccatttctatcttgtttc-gtcataccctgcgtcttgcgaggatggcgtttaataatatttgctgatt 14106172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 13512584 - 13512495
Alignment:
Q  156 tggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 245  Q
    |||||||| |||||||||||||||||||| ||||||||| ||| |||| |||||| || |||||||| || |||| ||||||| ||||||    
T  13512584 tggttatgttgtaccgtctatatgcggcatcatttgtattttgtttcgtccatacattgcgtcttgcgggaatgacgtttaataatattt 13512495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 7874610 - 7874654
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  7874610 ggtggttatggtgtaccgtctatatgcggcgccatttgtatcttg 7874654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 15457817 - 15457893
Alignment:
Q  175 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 251  Q
    |||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| |||||||  |||||||||||    
T  15457817 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaatattatttgccgat 15457893  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 7461010 - 7461107
Alignment:
Q  154 ggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 252  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||| ||| | |||||  | |||||||| ||||||| ||||||| |||||||| ||||    
T  7461010 ggtggttatggtgtactgtctatatgcaacaccatttgtattttgtttc-gtcatactctgcgtcttgcggggatgacgtttaataatatttgctgatt 7461107  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 253
Target Start/End: Complemental strand, 45311550 - 45311452
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    ||||||||||||| |||| |||||| |||||||||||||||||| |||| || | |||| | |||||| ||| ||  ||||||| ||||| ||||||||    
T  45311550 gtggttatggtgttccgtatatatgtggcaccatttgtatcttgtttcgtcctttccttgcatcttgcggggttggcgtttaataatattggccgattc 45311452  T

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Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 43248971 - 43248882
Alignment:
Q  157 ggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    ||||||| | ||||||||||||||||| |||||| ||||||| |||| |||||||||  ||||||   |||||| ||||||| |||||||    
T  43248971 ggttatgatataccgtctatatgcggcgccatttatatcttgtttcgtccataccttgtgtcttgtgaggatgacgtttaataatatttg 43248882  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 7455601 - 7455669
Alignment:
Q  169 ccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaat 238  Q
    |||||||| ||||||||||||||||||||  ||||  |||||| | |||||||| ||||||| |||||||    
T  7455601 ccgtctatttgcggcaccatttgtatcttatttcgttcatacc-tgcgtcttgcggggatgacgtttaat 7455669  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 184
Target Start/End: Original strand, 15457278 - 15457307
Alignment:
Q  155 gtggttatggtgtaccgtctatatgcggca 184  Q
    ||||||||||||||||||||||||||||||    
T  15457278 gtggttatggtgtaccgtctatatgcggca 15457307  T

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Target: scaffold0434 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 2424 - 2353
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttg 221  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  2424 tttaggtggttatggtgtaccgtctatatgcggcaccatctgtatcttgtttcgtccataccttgcgtcttg 2353  T

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Target: scaffold0085 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 48665 - 48767
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||  ||||||| |||| || ||| ||| |||||||| |    
T  48665 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttagtccatatcttgtgtcttgcggggaggacgttgaataatatttgcgg 48764  T
Q  250 att 252  Q
    |||    
T  48765 att 48767  T

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Target: scaffold0343 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 6035 - 6131
Alignment:
Q  150 tttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 246  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||  |||  |||| ||| |||||||| ||||||| ||||||| |||||||    
T  6035 tttaggtggttatgatgtaacgtctatatacggcaccatttgtatcttgtctcgttcatatcttgcgtcttgcggggatgacgtttaataatatttg 6131  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 35525 - 35472
Alignment:
Q  200 ttcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 253  Q
    |||| |||||||||||||||| | ||||||| ||| ||| ||||||||||||||    
T  35525 ttcgtccataccttacgtcttacggggatgacgttcaataatatttgccgattc 35472  T

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