View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18198_high_10 (Length: 319)
Name: NF18198_high_10
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18198_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 32460809 - 32461111
Alignment:
| Q |
1 |
ataactaacttttatatctctaatatcaggaaccacagggaaatcgaaaggagtgatgcttactcatcgcaacttgacggcgacggtggcggcatacaat |
100 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460809 |
ataactagcttttatatctctaatatcaggaaccacagggaaatcgaaaggagtgatgcttactcatcgcaacttgacggcgacggtggcggcatacaat |
32460908 |
T |
|
| Q |
101 |
gccgttaggattccgacggcgagtcctgcggtgtgtttgttaacagtgccgtgttttcacgtgtacggttttacgtaccttttgaagggtgtggctatga |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460909 |
gccgttaggattccgacggcgaatcctgcggtgtgtttgttaacagtgccgtgttttcacgtgtacggttttacgtaccttttgaagggtgtggctatga |
32461008 |
T |
|
| Q |
201 |
tggaaacggtggtgatgatggagaggtttgaattggggaaaatgttgggtgccgtggagaggtttagagtgactaatgttgcggtggcgccgcccgtggt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32461009 |
tggaaacggtggtgatgatggagaggtttgaattggggaaaatgttgggtgccgtggagaggtttagagtgactaatgttgcggtggcgccgcccgtggt |
32461108 |
T |
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| Q |
301 |
ggt |
303 |
Q |
| |
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||| |
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| T |
32461109 |
ggt |
32461111 |
T |
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