View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18198_high_23 (Length: 238)
Name: NF18198_high_23
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18198_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 5409043 - 5408859
Alignment:
| Q |
35 |
tttatactcatcaacaatttgcaagttcaacagcaatgatcatacacaaacaagctaaatcacgcaaaagcagaaaaacgcgaacacacataaattcatt |
134 |
Q |
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| T |
5409043 |
tttatactcatcaacaatttgcaagttcaacagcaatgatcatacacaaacaagctaaatcacgcaaaagcagaaaaacgcgaacacacataaattcatt |
5408944 |
T |
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| Q |
135 |
tccaaacactataagcaacaaaaataatgttcatcatcatcgatcaacaacatgcaaggatcacacgaacaagctaaatcgtgca |
219 |
Q |
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| T |
5408943 |
tccaaacactataagcaacaaaaataatgttcatcatcatcgatcaacaacatgcaaggatcacacgaacaagctaaatcgtgca |
5408859 |
T |
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