View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18198_high_3 (Length: 525)

Name: NF18198_high_3
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18198_high_3
NF18198_high_3
[»] chr5 (40 HSPs)
chr5 (11-335)||(22298196-22298525)
chr5 (363-463)||(25328017-25328117)
chr5 (363-470)||(36568545-36568650)
chr5 (374-470)||(27502023-27502119)
chr5 (374-470)||(6500525-6500621)
chr5 (381-470)||(32487468-32487557)
chr5 (363-463)||(42405574-42405672)
chr5 (363-461)||(1028493-1028591)
chr5 (377-462)||(15370182-15370267)
chr5 (375-472)||(26074134-26074231)
chr5 (374-466)||(6500901-6500993)
chr5 (386-470)||(40296314-40296398)
chr5 (375-470)||(9498643-9498737)
chr5 (395-466)||(36492225-36492296)
chr5 (386-470)||(3295344-3295427)
chr5 (440-508)||(22298927-22298995)
chr5 (410-466)||(29549278-29549334)
chr5 (363-470)||(624271-624378)
chr5 (395-470)||(18603128-18603203)
chr5 (375-470)||(26074687-26074782)
chr5 (395-466)||(33747850-33747921)
chr5 (395-470)||(34753033-34753108)
chr5 (403-470)||(41170709-41170776)
chr5 (410-467)||(301029-301086)
chr5 (429-470)||(13042614-13042655)
chr5 (363-462)||(623901-623998)
chr5 (374-470)||(3295002-3295098)
chr5 (375-462)||(6224279-6224366)
chr5 (363-470)||(15370477-15370583)
chr5 (377-459)||(26900007-26900089)
chr5 (409-461)||(795254-795306)
chr5 (386-470)||(11416976-11417060)
chr5 (395-467)||(35150084-35150156)
chr5 (375-467)||(38427625-38427717)
chr5 (431-470)||(13112612-13112651)
chr5 (403-470)||(13415776-13415843)
chr5 (408-470)||(24489227-24489289)
chr5 (376-470)||(41632857-41632950)
chr5 (380-463)||(26590902-26590986)
chr5 (378-446)||(38427318-38427386)
[»] chr2 (31 HSPs)
chr2 (378-470)||(36178596-36178688)
chr2 (377-470)||(5542615-5542708)
chr2 (374-470)||(6421806-6421902)
chr2 (375-466)||(6421464-6421555)
chr2 (395-470)||(6422185-6422260)
chr2 (376-466)||(37106003-37106093)
chr2 (377-470)||(14745657-14745750)
chr2 (377-470)||(15511486-15511578)
chr2 (374-470)||(23346311-23346407)
chr2 (379-470)||(15880338-15880429)
chr2 (375-470)||(36178159-36178254)
chr2 (375-470)||(42514724-42514819)
chr2 (377-470)||(962673-962766)
chr2 (398-470)||(33731723-33731795)
chr2 (374-466)||(41283462-41283554)
chr2 (377-459)||(40163362-40163444)
chr2 (386-470)||(35580723-35580807)
chr2 (395-470)||(3672776-3672851)
chr2 (395-470)||(5543006-5543081)
chr2 (395-466)||(36005888-36005959)
chr2 (395-470)||(37106263-37106338)
chr2 (377-447)||(1769990-1770060)
chr2 (363-466)||(3673147-3673249)
chr2 (363-466)||(16590962-16591065)
chr2 (431-470)||(29874067-29874106)
chr2 (427-470)||(37895101-37895144)
chr2 (388-470)||(29676983-29677065)
chr2 (397-466)||(12529038-12529107)
chr2 (429-470)||(14745336-14745377)
chr2 (429-466)||(28254279-28254316)
chr2 (414-470)||(36784287-36784343)
[»] chr6 (32 HSPs)
chr6 (381-467)||(1846826-1846912)
chr6 (375-470)||(16454650-16454745)
chr6 (374-470)||(2578430-2578526)
chr6 (374-470)||(16454982-16455078)
chr6 (376-470)||(3415533-3415629)
chr6 (374-466)||(2578822-2578914)
chr6 (374-470)||(29518578-29518674)
chr6 (374-470)||(29518995-29519091)
chr6 (374-470)||(32741254-32741350)
chr6 (363-470)||(2377829-2377935)
chr6 (381-470)||(2378201-2378290)
chr6 (374-466)||(2843634-2843726)
chr6 (363-470)||(16107753-16107861)
chr6 (375-470)||(1127435-1127530)
chr6 (393-466)||(2579498-2579571)
chr6 (397-466)||(3409338-3409407)
chr6 (395-463)||(6999804-6999872)
chr6 (395-467)||(35210282-35210354)
chr6 (395-470)||(3058301-3058376)
chr6 (403-470)||(10074007-10074074)
chr6 (376-466)||(10074352-10074442)
chr6 (374-462)||(2579860-2579947)
chr6 (386-470)||(3409735-3409819)
chr6 (374-459)||(2579097-2579181)
chr6 (377-466)||(14748332-14748417)
chr6 (374-461)||(12071678-12071765)
chr6 (363-462)||(26544132-26544230)
chr6 (395-441)||(3409405-3409451)
chr6 (433-467)||(21130103-21130137)
chr6 (429-470)||(11637763-11637804)
chr6 (403-467)||(12085050-12085114)
chr6 (363-446)||(16108150-16108233)
[»] chr7 (35 HSPs)
chr7 (374-466)||(22567026-22567118)
chr7 (375-467)||(37533352-37533444)
chr7 (376-470)||(30244345-30244439)
chr7 (374-470)||(1085603-1085699)
chr7 (363-467)||(11845269-11845372)
chr7 (375-466)||(30245156-30245243)
chr7 (375-466)||(30253571-30253658)
chr7 (378-470)||(23368-23460)
chr7 (363-470)||(7517655-7517762)
chr7 (393-467)||(36939739-36939813)
chr7 (374-464)||(47129450-47129539)
chr7 (377-462)||(30032650-30032735)
chr7 (377-470)||(34218024-34218117)
chr7 (366-467)||(37167859-37167960)
chr7 (410-470)||(45754790-45754850)
chr7 (408-467)||(19122809-19122868)
chr7 (375-470)||(45433316-45433411)
chr7 (380-466)||(6054639-6054725)
chr7 (378-466)||(37533002-37533089)
chr7 (388-462)||(28300569-28300644)
chr7 (383-470)||(40094770-40094857)
chr7 (408-470)||(8128462-8128524)
chr7 (412-470)||(24177510-24177568)
chr7 (429-470)||(16569271-16569312)
chr7 (429-470)||(16596350-16596391)
chr7 (423-467)||(29157643-29157687)
chr7 (403-466)||(9901722-9901785)
chr7 (416-470)||(7554100-7554154)
chr7 (375-457)||(37532739-37532821)
chr7 (429-470)||(14681585-14681626)
chr7 (429-470)||(21416183-21416224)
chr7 (429-470)||(23569044-23569085)
chr7 (410-470)||(24838724-24838784)
chr7 (410-470)||(28300276-28300336)
chr7 (376-444)||(30245256-30245324)
[»] chr3 (36 HSPs)
chr3 (386-470)||(3135453-3135537)
chr3 (363-466)||(37990615-37990718)
chr3 (394-470)||(22303962-22304038)
chr3 (395-466)||(15772933-15773004)
chr3 (375-470)||(29644890-29644985)
chr3 (395-462)||(37990985-37991052)
chr3 (361-470)||(41359465-41359574)
chr3 (374-466)||(43346777-43346870)
chr3 (363-467)||(42342364-42342468)
chr3 (375-470)||(29644569-29644664)
chr3 (391-470)||(39934959-39935038)
chr3 (397-470)||(32462910-32462983)
chr3 (386-470)||(32589778-32589862)
chr3 (378-466)||(42342081-42342169)
chr3 (374-466)||(15773271-15773365)
chr3 (395-466)||(22304648-22304719)
chr3 (411-470)||(54017572-54017631)
chr3 (396-470)||(41359774-41359848)
chr3 (379-465)||(53577444-53577530)
chr3 (396-462)||(54018207-54018273)
chr3 (371-470)||(1634299-1634397)
chr3 (363-470)||(52634750-52634856)
chr3 (363-462)||(54017793-54017891)
chr3 (408-466)||(4823734-4823792)
chr3 (408-470)||(12114583-12114645)
chr3 (408-470)||(12749244-12749306)
chr3 (403-469)||(31190085-31190151)
chr3 (361-470)||(35946597-35946706)
chr3 (424-470)||(39389145-39389191)
chr3 (398-470)||(22303670-22303742)
chr3 (363-446)||(49336662-49336746)
chr3 (395-462)||(45901797-45901864)
chr3 (386-460)||(50612446-50612520)
chr3 (429-466)||(39336012-39336049)
chr3 (398-463)||(39914334-39914399)
chr3 (386-470)||(33803251-33803335)
[»] chr8 (42 HSPs)
chr8 (375-466)||(3669766-3669857)
chr8 (388-466)||(34834955-34835033)
chr8 (363-470)||(3038265-3038373)
chr8 (387-466)||(6731974-6732053)
chr8 (363-470)||(9483163-9483270)
chr8 (386-463)||(8919143-8919220)
chr8 (377-470)||(40518146-40518239)
chr8 (376-473)||(40579258-40579355)
chr8 (395-470)||(30441160-30441235)
chr8 (377-466)||(6651573-6651662)
chr8 (363-470)||(30359346-30359454)
chr8 (395-466)||(5915946-5916017)
chr8 (408-470)||(20870594-20870656)
chr8 (377-466)||(6876852-6876941)
chr8 (366-470)||(9482583-9482687)
chr8 (389-465)||(40579508-40579584)
chr8 (395-470)||(3670135-3670210)
chr8 (397-470)||(147895-147968)
chr8 (377-461)||(1014234-1014319)
chr8 (397-470)||(32640542-32640615)
chr8 (374-467)||(41129066-41129159)
chr8 (378-470)||(40518657-40518749)
chr8 (399-470)||(70286-70357)
chr8 (363-466)||(9309434-9309535)
chr8 (399-466)||(33113379-33113446)
chr8 (393-470)||(1013877-1013954)
chr8 (374-466)||(18371980-18372073)
chr8 (377-466)||(34835288-34835377)
chr8 (377-466)||(34835554-34835643)
chr8 (377-466)||(34835820-34835909)
chr8 (374-459)||(37544478-37544562)
chr8 (378-443)||(43274626-43274691)
chr8 (396-460)||(12283957-12284021)
chr8 (386-466)||(45122703-45122783)
chr8 (395-470)||(9507857-9507932)
chr8 (407-470)||(9609160-9609223)
chr8 (395-470)||(30359684-30359759)
chr8 (375-466)||(45121898-45121989)
chr8 (397-460)||(45122067-45122130)
chr8 (363-420)||(3037944-3038002)
chr8 (377-470)||(9309054-9309149)
chr8 (386-470)||(32305552-32305636)
[»] chr4 (48 HSPs)
chr4 (381-468)||(54343000-54343087)
chr4 (377-470)||(54017583-54017676)
chr4 (374-466)||(39792845-39792937)
chr4 (395-470)||(25483411-25483486)
chr4 (364-466)||(36629316-36629418)
chr4 (374-459)||(39404104-39404189)
chr4 (395-470)||(1731653-1731728)
chr4 (387-470)||(49302981-49303064)
chr4 (363-470)||(54936271-54936376)
chr4 (396-466)||(54108616-54108686)
chr4 (365-470)||(50630731-50630836)
chr4 (363-466)||(22028342-22028446)
chr4 (386-466)||(23817678-23817758)
chr4 (374-466)||(43827519-43827610)
chr4 (363-470)||(3340882-3340988)
chr4 (375-462)||(10246002-10246089)
chr4 (363-470)||(41370432-41370538)
chr4 (374-461)||(44620743-44620830)
chr4 (381-470)||(18932741-18932830)
chr4 (398-467)||(50788003-50788072)
chr4 (375-467)||(36608647-36608739)
chr4 (395-470)||(44620428-44620503)
chr4 (377-470)||(18879881-18879974)
chr4 (397-470)||(50459796-50459869)
chr4 (386-470)||(22183261-22183345)
chr4 (363-467)||(50002504-50002608)
chr4 (378-470)||(55933113-55933205)
chr4 (395-466)||(32941129-32941200)
chr4 (388-459)||(45489331-45489402)
chr4 (411-465)||(22027983-22028037)
chr4 (397-470)||(52884770-52884844)
chr4 (408-470)||(54108988-54109049)
chr4 (374-462)||(2740783-2740869)
chr4 (397-462)||(39404481-39404546)
chr4 (378-470)||(49076820-49076912)
chr4 (395-462)||(20825919-20825986)
chr4 (395-466)||(44621081-44621152)
chr4 (384-467)||(48111693-48111776)
chr4 (408-470)||(4955336-4955398)
chr4 (403-465)||(19504776-19504838)
chr4 (408-466)||(34646668-34646726)
chr4 (416-466)||(45496884-45496934)
chr4 (408-470)||(49880235-49880296)
chr4 (429-470)||(10396491-10396532)
chr4 (429-470)||(11197301-11197342)
chr4 (408-461)||(40067128-40067181)
chr4 (377-446)||(43174240-43174309)
chr4 (377-466)||(31691231-31691322)
[»] scaffold0391 (2 HSPs)
scaffold0391 (363-470)||(1083-1189)
scaffold0391 (429-470)||(1733-1774)
[»] chr1 (38 HSPs)
chr1 (363-470)||(45493951-45494057)
chr1 (377-470)||(41142447-41142541)
chr1 (395-467)||(41759561-41759633)
chr1 (363-470)||(44290800-44290908)
chr1 (375-470)||(26661886-26661981)
chr1 (363-466)||(40082485-40082588)
chr1 (363-470)||(44290435-44290541)
chr1 (398-462)||(5319976-5320040)
chr1 (375-470)||(17294652-17294748)
chr1 (363-470)||(34364582-34364688)
chr1 (396-470)||(37556186-37556260)
chr1 (408-466)||(39066221-39066279)
chr1 (396-466)||(41157070-41157140)
chr1 (384-465)||(14318947-14319028)
chr1 (374-470)||(3875318-3875414)
chr1 (395-470)||(3537607-3537682)
chr1 (403-470)||(29798274-29798341)
chr1 (395-470)||(32168706-32168781)
chr1 (396-462)||(37555812-37555878)
chr1 (396-470)||(41157450-41157524)
chr1 (393-470)||(34365000-34365077)
chr1 (375-460)||(50052012-50052096)
chr1 (379-463)||(11977026-11977110)
chr1 (363-447)||(21378036-21378119)
chr1 (410-466)||(26661545-26661601)
chr1 (395-466)||(48588496-48588567)
chr1 (375-470)||(50051677-50051771)
chr1 (385-463)||(34649520-34649598)
chr1 (397-470)||(9955984-9956057)
chr1 (374-463)||(31767148-31767237)
chr1 (376-460)||(5528743-5528827)
chr1 (423-470)||(3550795-3550842)
chr1 (384-463)||(11977362-11977441)
chr1 (403-470)||(38804371-38804438)
chr1 (429-463)||(12466365-12466399)
chr1 (386-460)||(45084461-45084535)
chr1 (468-509)||(37556121-37556162)
chr1 (417-470)||(44043802-44043855)
[»] scaffold0702 (2 HSPs)
scaffold0702 (363-470)||(491-597)
scaffold0702 (381-446)||(141-206)
[»] scaffold0078 (2 HSPs)
scaffold0078 (395-466)||(5061-5132)
scaffold0078 (429-470)||(5432-5473)
[»] scaffold0027 (1 HSPs)
scaffold0027 (386-470)||(47435-47519)


Alignment Details
Target: chr5 (Bit Score: 290; Significance: 1e-162; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 11 - 335
Target Start/End: Original strand, 22298196 - 22298525
Alignment:
Q  11 atgaagaaaagagggggcaagagtgcgcacgtggaattgggaaaagattggtgatgtaattgtgttttggcgtgtttggtaatggaagagacattgaacc 110  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22298196 atgaagaaaagagggggcaagagtgcgcacgtggaattaggaaaagattggtgatgtaattgtgttttggcgtgtttggtaatggaagagacattgcacc 22298295  T
Q  111 ggcaaaggaggaaagagtgagagatgaagcaatgcaagcatagaacacaacaccaatatacgacactagcagtaccactgccactccttgtgt-----ta 205  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||    
T  22298296 ggcaaaggaggaaagagtgagagatgaagcaatgcatgcatagaacacaacaccaatatacgacactagcagtaccactgccactccttgtgttatgcta 22298395  T
Q  206 tgctgctacacctctttctctaacacacactccagctctctatgtactataccaccaagataaatgttagggtgaaaaggtgtttcatagattccatgcc 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22298396 tgctgctacacctctttctctaacacacactccagctctctctgtactataccaccaagataattgttagggtgaaaaggtgtttcatagattccatgcc 22298495  T
Q  306 ttatgaagttactgtatggatgatctcacc 335  Q
    ||||||||||||||||||||||||||||||    
T  22298496 ttatgaagttactgtatggatgatctcacc 22298525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 25328117 - 25328017
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||   |||| |||||||||||||||||| | |||||||||||||    
T  25328117 tgttgggtcactgaggggagctcgggggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaaccttaaggc 25328018  T
Q  463 a 463  Q
    |    
T  25328017 a 25328017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 36568545 - 36568650
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| || |||||||||||||||||| | ||||||| |||||||||||||||||| |||  | |||||| ||||||||||| |||||||||||||||    
T  36568545 tgttgggtcattgaggggagctcgggggaccttccacatcgaggatagaacaaccacacaag--agagagacgccacactcttaccaaaaaccttaaggc 36568642  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  36568643 aatgggtt 36568650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 27502023 - 27502119
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| |||||| | ||||||| |||||||||||||||||| |||||| |||||||||||||| ||| |||||| ||||||||||| ||||    
T  27502023 tgaggggagctagggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtt 27502119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 6500621 - 6500525
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||  |||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  6500621 tgaggggagcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtt 6500525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 470
Target Start/End: Complemental strand, 32487557 - 32487468
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||||| ||||||||| |||| |||||||||||||||||||| ||| ||  |||||||||| | |||||||||||||||||||||    
T  32487557 agcttgggggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtt 32487468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 463
Target Start/End: Original strand, 42405574 - 42405672
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||| || ||||  ||||||||||||||||||| | |||||||||||||    
T  42405574 tgttgggtcactggggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagc--aagagacaccacactcttacccaaaaccttaaggc 42405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 461
Target Start/End: Original strand, 1028493 - 1028591
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||| |||||||||||||| |||||| | ||||||| |||| |||||||||| || |||  | |||||| ||||||||||| ||||||||||||||    
T  1028493 tgttgggtcactgaggggagctagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaagg 1028591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 15370267 - 15370182
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||||||||||| | ||||||| |||| |||||||| | || |||||| |||||||||||||||||| | |||||||||||||    
T  15370267 ggggagctcgggggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggc 15370182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 472
Target Start/End: Original strand, 26074134 - 26074231
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggttca 472  Q
    ||||||||||  |||||||| |||||| |||| |||| ||||||||  ||  | |||||||||||||||||| | |||||||||||||||||||||||    
T  26074134 gaggggagctttggggatcacccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttca 26074231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 6500993 - 6500901
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||  |||||| | ||||||| |||| ||||| |||| || ||| || |||||||||||||||||||| |||||||||||||||||    
T  6500993 tgaggggagcctgggggaccgtccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatg 6500901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 40296314 - 40296398
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | ||||||| |||||||||||||    
T  40296314 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtt 40296398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 9498643 - 9498737
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| |||||| | |||||||||||| |||| || | |||||| ||| |||||||||||||||||| | |||| ||||||||||||||||    
T  9498643 gaggggagctagggggaccgtccacattgaggctagaccagc-acataaacaagagagacaccacactcttacccaaaatcttaaggcaatgggtt 9498737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 36492225 - 36492296
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| ||||||| |||| ||||    
T  36492225 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatg 36492296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 3295344 - 3295427
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| ||||||||||||| |||||| ||||||| |||||||||| | |||||||||||||||| ||||    
T  3295344 gggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactctta-ccaaaaccttaaggcaattggtt 3295427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 22298927 - 22298995
Alignment:
Q  440 actcttatcaaaaaccttaaggcaatgggttcaacctttactatttttaagcgatgtgagacatataac 508  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||||||   |||||||||||||||||    
T  22298927 actcttacccaaaaccttaaggcaatggattcaacctttattatttttatctgatgtgagacatataac 22298995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 29549278 - 29549334
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||    
T  29549278 gaacaaccacataagcaagagagacgccacactcttatccaaaaccttaaggtaatg 29549334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 624378 - 624271
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||  ||||||||||||| | | ||||||| |||| |||||||||| || |||  | |||||||||||||||||| | ||||||| |||||    
T  624378 tgttgggtcactagggggagctcggggaaccgtccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggc 624279  T
Q  463 aatgggtt 470  Q
     |||||||    
T  624278 tatgggtt 624271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 18603128 - 18603203
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||| |||||| |||||| |||||  ||||||||||| | |||||||||||||||||||||    
T  18603128 tccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtt 18603203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 26074782 - 26074687
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||   ||||||| |||||| |||| |||| ||||||||  ||  | |||||||||||||||||| | |||||||||||||||||||||    
T  26074782 gaggggagctttagggatcacccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtt 26074687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 33747921 - 33747850
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||  ||| |||||||||| |||||| || |||||||||||||||||||| |||| ||||||||||||    
T  33747921 tccacatcaaggctagaacaaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatg 33747850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 34753033 - 34753108
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||||| || |||||| |||||| ||||||||||| | |||||||||||||||| ||||    
T  34753033 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtt 34753108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 41170776 - 41170709
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||||||||||| |||||| | | |||||||||||||| | |||||||||||||||||||||    
T  41170776 gaggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtt 41170709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 301086 - 301029
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||| ||||| |||||| |||||||||||||||||| |||||| |||||||||||||    
T  301086 gaacagccacacaagcaagagagacaccacactcttaccaaaaatcttaaggcaatgg 301029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 13042655 - 13042614
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  13042655 agagacaccacactcttatccaaaaccttaaggcaatgggtt 13042614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 623998 - 623901
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||||||  ||||||||||| | || ||||||||| |||||||||| || |||  | ||||||||||||||||||   |||||||||||||    
T  623998 tgttgggtcactgagg--agctcgggggaccgtctacattgaggctagaacaaccccacaagtgagagagacaccacactcttactcaaaaccttaaggc 623901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 3295002 - 3295098
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||  ||||||   ||||||| |||| || |||||||||| || ||| ||||||||||||||| || | ||||||| |||||||||||||    
T  3295002 tgaggggagcgagggggactgtccacatcgaggctacaacaaccacacaaccaagagagacaccacactcatacccaaaacctcaaggcaatgggtt 3295098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 6224366 - 6224279
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||||  |||||| | |||| ||||||| |||| ||||| || ||||||  ||| ||||||||||||| |||||||||||||||    
T  6224366 gaggggagcctgggggaccgtccatattgaggctagaccaaccgcacaagcaactgaggcaccacactcttaccaaaaaccttaaggc 6224279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 15370583 - 15370477
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||||| ||||||||||  || ||| | ||||||| |||| |||||||||| || || ||| |||||| |||||||||||   |||||||||||||    
T  15370583 tgttgggaca-tgaggggagcatggaggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggc 15370485  T
Q  463 aatgggtt 470  Q
     |||||||    
T  15370484 tatgggtt 15370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 459
Target Start/End: Original strand, 26900007 - 26900089
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    |||||||| |||||| | |||||||  ||| |||||||| | || |||||| |||||||||||||||||| | ||||||||||    
T  26900007 ggggagcttgggggaccgtccacatcaaggctagaacaaacccacaagcaagagagacaccacactcttacccaaaaccttaa 26900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 795254 - 795306
Alignment:
Q  409 agaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||||| || |||||| |||||||||||||||||| | ||||||||||||    
T  795254 agaacaaccgcacaagcaagagagacaccacactcttacctaaaaccttaagg 795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 11416976 - 11417060
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| ||||||||| || | |||||||| | || |||||| ||||| | ||||||||||   |||||||||||||||||||||    
T  11416976 gggggaccatccacatcgaagctagaacaatcccacaagcaagagagagatcacactcttacacaaaaccttaaggcaatgggtt 11417060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 35150156 - 35150084
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||||||| |||||||||||||  ||  | |||||||||||||| ||| | ||||||||||| ||||||    
T  35150156 tccacattgaggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatgg 35150084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 38427717 - 38427625
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||||||||  |||||||||||| |||| |||||||||| || |||  | ||||||  ||||||||||   ||||||||||| ||||||    
T  38427717 gaggggagctcggaagatcatccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatgg 38427625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Complemental strand, 13112651 - 13112612
Alignment:
Q  431 agacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  13112651 agacaccacactcttatccaaaaccttaagacaatgggtt 13112612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 13415776 - 13415843
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||||||||| || |||||| |||||| ||||||||||| | |||||||||||| ||| ||||    
T  13415776 gaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtt 13415843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 24489227 - 24489289
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| || ||| ||||||||| |||||||||||   |||| ||||||||||||||||    
T  24489227 tagaacaaccgcacaagtaaaagagacgccacactcttacgcaaaatcttaaggcaatgggtt 24489289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 41632950 - 41632857
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||||| | ||||||| |||  || ||||||| || |||||| |||||||||||||||||| | |||| ||||| ||| ||||||    
T  41632950 aggggagct-gggggaccgtccacatcgagactaaaacaaccgcacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtt 41632857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 26590902 - 26590986
Alignment:
Q  380 gagctcgggggatc-atccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||||||||| | |||||||| |||| |||||||||||||  ||  | |||||| |||||||||||   ||||||||||||||    
T  26590902 gagctcgggggaaccatccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggca 26590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 38427386 - 38427318
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactctta 446  Q
    |||||||||||||| |  | |||| |||| |||||||||| || |||||| |||||| |||||||||||    
T  38427386 gggagctcgggggaccgccaacatcgaggttagaacaaccgcacaagcaagagagacgccacactctta 38427318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 378 - 470
Target Start/End: Original strand, 36178596 - 36178688
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| ||||||||| ||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  36178596 gggagcgcgggggatcgtccacatagaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtt 36178688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 5542615 - 5542708
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||| | ||||||| |||  | |||||||| || |||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  5542615 ggggagctcgggggaccgtccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtt 5542708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 6421902 - 6421806
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | ||||||| ||||  |||||||||||| |||  | |||||||||||||||||| | |||||||||||||||| ||||    
T  6421902 tgaggggagctcgggggaccgtccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtt 6421806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 6421555 - 6421464
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||||| | ||||||| |||  |||||||||| || |||||| |||||||||||||||||| | ||||||| |||||||||    
T  6421555 gaggggagctcgggggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatg 6421464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 6422260 - 6422185
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||||||||| |||||||    
T  6422260 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtt 6422185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 466
Target Start/End: Complemental strand, 37106093 - 37106003
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||| | ||||||| |||| ||||||||||  | |||||| |||||||||||||||||| | |||| ||||||||||||    
T  37106093 aggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatg 37106003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 14745657 - 14745750
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||   ||||||| |||| |||||||||||||   |||| |||||| ||||||||||| | |||||||||||||||||||||    
T  14745657 ggggagctcgggggactgtccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaaccttaaggcaatgggtt 14745750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 15511486 - 15511578
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||| ||| ||||||| |||  ||||||||||||| |||||| |||||||||||||||||| | |||| |||||| |||||||||    
T  15511486 ggggagctcgggg-atcgtccacatcgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtt 15511578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 23346407 - 23346311
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||| || | |||||||  ||| |||||||||| || |||||| ||||||| |||||||||| | ||||||||||||| |||||||    
T  23346407 tgaggggagctcgggcgaccgtccacatctaggctagaacaaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggtt 23346311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 379 - 470
Target Start/End: Complemental strand, 15880429 - 15880338
Alignment:
Q  379 ggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| ||| | ||||||| |||| || ||||||| || |||||| |||||| ||||||||||| | |||||||||||||||||||||    
T  15880429 ggagctcggaggaacgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtt 15880338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 36178159 - 36178254
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| ||||||| | || |||| |||| || |||||||||| |||||| |||| ||||||||||||| | |||| ||||||||||||||||    
T  36178159 gaggggagcgcgggggaccgtctacatcgaggctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtt 36178254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 42514819 - 42514724
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||||| | ||||||| |||| |||||||||| || ||| || |||||| ||||||||||| | |||| |||||||| |||||||    
T  42514819 gaggggagctcgggggaccgtccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtt 42514724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 962766 - 962673
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| ||||| || | ||||||| |||| ||||||||||||| |||||| || |||| |||||||||| | ||||||||||| |||||||||    
T  962766 ggggagttcgggagaccgtccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtt 962673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 33731795 - 33731723
Alignment:
Q  398 acattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||| |||||||||| ||||||||| |||||||||| ||||||| | |||||||||||||||| ||||    
T  33731795 acatcgaggctagaacaaccgcataagcaagagagacaccatactcttacccaaaaccttaaggcaataggtt 33731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 41283462 - 41283554
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||  |||||| | |||||||  ||| ||||||||||||| || ||| |||||| ||||||||||| | |||||||||||||||||    
T  41283462 tgaggggagcatgggggaccgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaaggcaatg 41283554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 459
Target Start/End: Original strand, 40163362 - 40163444
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    ||||||||| || || |||| |||| |||| ||||||||||||| |||||| |||||||||||||| ||| | ||||||||||    
T  40163362 ggggagctcaggagaccatctacatcgaggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaa 40163444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 35580723 - 35580807
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| |||||||||| || || ||| |||||| || |||||||| | |||||||||||||||||||||    
T  35580723 gggggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactcttacccaaaaccttaaggcaatgggtt 35580807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 3672851 - 3672776
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||  ||||||||||||| ||  || |||||||||||||||||| | |||| ||||||||||||||||    
T  3672851 tccacatcgagactagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggtt 3672776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 5543006 - 5543081
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| | |||||||| || |||||| |||||||||||||||||| | |||| ||||||||||| ||||    
T  5543006 tccacatcgaggcttgaacaaccgcacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtt 5543081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 36005888 - 36005959
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| |||||||||| || |||||| |||||| ||||||| ||| | |||||||||||||||||    
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatg 36005959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 37106338 - 37106263
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||| | || |||||| ||| |||||||||||||| | |||||||||||| ||||||||    
T  37106338 tccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtt 37106263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 447
Target Start/End: Complemental strand, 1770060 - 1769990
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttat 447  Q
    |||||||| || ||||| | ||||| |||| |||||||||| || |||||| |||||||||||||||||||    
T  1770060 ggggagctaggaggatcgttcacatcgaggctagaacaacctcacaagcaagagagacaccacactcttat 1769990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 3673249 - 3673147
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| |||||||  |||||| | ||||||| |||| |||||||||||||  || || ||||||| |||||||||| | |||| ||||| ||    
T  3673249 tgttgggtcactg-ggggagccagggggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagc 3673151  T
Q  463 aatg 466  Q
    ||||    
T  3673150 aatg 3673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 16591065 - 16590962
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| || ||||||||||||||| ||   |||||||||||| |||||||||| || ||| || |||||||  | | |||||   |||||||||||||    
T  16591065 tgttgggtcattgaggggagctcgggagactgtccacattgaggctagaacaaccccacaagtaagagagacattagattcttacttaaaaccttaaggc 16590966  T
Q  463 aatg 466  Q
    ||||    
T  16590965 aatg 16590962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 29874067 - 29874106
Alignment:
Q  431 agacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  29874067 agacgccacactcttatccaaaaccttaaggcaatgggtt 29874106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Original strand, 37895101 - 37895144
Alignment:
Q  427 aaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  37895101 aaagaaacaccacactcttacccaaaaccttaaggcaatgggtt 37895144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 29677065 - 29676983
Alignment:
Q  388 gggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||||||| |||| | |||||||| || ||  || ||||||||||||||||||   ||| |||||||||||||||||    
T  29677065 gggaccatccacatcgaggttggaacaaccccacaattaagagagacaccacactcttacttaaagccttaaggcaatgggtt 29676983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 12529038 - 12529107
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||| |||||||||| || || ||| |||||||| ||  ||||||| ||||| |||||||||||    
T  12529038 cacattgaggttagaacaaccgcacaaacaagagagacactacgttcttatctaaaactttaaggcaatg 12529107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 14745336 - 14745377
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  14745336 agagacgccacactcttacccaaaaccttaaggcaatgggtt 14745377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Original strand, 28254279 - 28254316
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||||| | |||||||||||||||||    
T  28254279 agagacaccacactcttacccaaaaccttaaggcaatg 28254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 36784287 - 36784343
Alignment:
Q  414 aaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||||| |||||||| ||||| ||||| ||||||||||| ||| |||||    
T  36784287 aaccacacaagcaagagagacacaacacttttatccaaaaccttaagacaaagggtt 36784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 381 - 467
Target Start/End: Complemental strand, 1846912 - 1846826
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||||||| | ||||||| |||| |||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1846912 agctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatgg 1846826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 16454745 - 16454650
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||||| | ||||||| |||| |||||||||| || |||||| |||||| ||||||||||||| |||| ||||||||||||||||    
T  16454745 gaggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtt 16454650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 2578430 - 2578526
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| ||| |||||| | ||||||| |||| |||||||||| || ||||||||||||||||||||||||| | ||||||||||||| |||||||    
T  2578430 tgaggggggctagggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtt 2578526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 16455078 - 16454982
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | ||||||| |||| |||||||||| || |||||| |||||| ||||||||||| | |||||||||||||||| ||||    
T  16455078 tgaggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtt 16454982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 3415629 - 3415533
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggataga--acaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||||| | ||||||| |||| ||||  |||||| || |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3415629 aggggagcttgggggaccttccacatcgaggctagagaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtt 3415533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 2578822 - 2578914
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||  |||||| | ||||||| ||||  |||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||    
T  2578822 tgaggggagcctgggggaccgtccacatcgaggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaaggtaatg 2578914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 29518674 - 29518578
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||| ||||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||| ||||||||    
T  29518674 tgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtt 29518578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 29519091 - 29518995
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||| ||||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||| ||||||||    
T  29519091 tgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtt 29518995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Complemental strand, 32741350 - 32741254
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||| ||||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||| ||||||||    
T  32741350 tgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtt 32741254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 2377935 - 2377829
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||| ||||||||||| | ||||||| |||| ||||| ||||||  |||||| | |||||||||||||||| | |||||||||||||    
T  2377935 tgttgggtcactg-gggaagctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggc 2377837  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  2377836 aatgggtt 2377829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 470
Target Start/End: Complemental strand, 2378290 - 2378201
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| | ||||||| |||| ||||||||||||  |||||| |||||||||||| ||||| | |||||||||||| ||||||||    
T  2378290 agctcgggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtt 2378201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 2843726 - 2843634
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||| | |||||| | ||||||| |||| ||||||||||||  |||||| ||||| |||||||||||| | |||||||||||||||||    
T  2843726 tgaggggagttagggggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatg 2843634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 16107861 - 16107753
Alignment:
Q  363 tgttgggacactga-ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||| |||||| |||||| | |||| | || |||||| |||| |||| ||||| || |||||| |||||||||||||||||| | ||||||||||||    
T  16107861 tgttgggtcactgaaggggagttaggggtaccacccacatcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaagg 16107762  T
Q  462 caatgggtt 470  Q
    |||||||||    
T  16107761 caatgggtt 16107753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 1127530 - 1127435
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||  ||||| || |||||| |||| |||| |||||||||||| || |||||| ||||||||||| | |||||||||||| ||||||||    
T  1127530 gaggggagctttggggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtt 1127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 2579498 - 2579571
Alignment:
Q  393 catccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||| |||| ||||||||||||| |||||| |||||||||| ||| ||| | |||||||||||||||||    
T  2579498 catccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatg 2579571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 3409407 - 3409338
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 3409338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 6999804 - 6999872
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    ||||||| |||  |||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||    
T  6999804 tccacatcgagactagaacaaccacattagcaagagagacgccacactcttatccaaaaccttaaggca 6999872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 35210354 - 35210282
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||| |||| |||| ||||| || |||||||||| |||||||||||||| | ||||||||||||||||||    
T  35210354 tccacatcgaggctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatgg 35210282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 3058376 - 3058301
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||| |||  | |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  3058376 tccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtt 3058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 10074007 - 10074074
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||||||||| |||||| | |||||||||||||| ||| | |||||||||||||||||||||    
T  10074007 gaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtt 10074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 10074352 - 10074442
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||  ||||||  |||||||| |||| |||||||||||||  ||  | |||||||||||||||||| | |||||||||||||||||    
T  10074352 aggggagcctgggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatg 10074442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 462
Target Start/End: Original strand, 2579860 - 2579947
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||||||| |||| | | ||||||| |||| |||||||||| || |||||| |||||||||||| ||||| | |||||||||||||    
T  2579860 tgaggggagcttgggg-accttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggc 2579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 3409819 - 3409735
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | ||||  | |||||||||||||    
T  3409819 gggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtt 3409735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 2579097 - 2579181
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    |||||||||||||||| | | | ||||| |||| |||||||||||||  ||||| |||||||||||||||||| | ||| ||||||    
T  2579097 tgaggggagctcgggg-accgtgcacatcgaggctagaacaaccacacgagcaagagagacaccacactcttagccaaagccttaa 2579181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 14748332 - 14748417
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| ||||||| | ||||||| |||| ||||||||||||| |||||    ||| |||||||||||| | |||||||||| ||||||    
T  14748332 ggggagcgcgggggaccgtccacatcgaggctagaacaaccacacaagca----agagaccacactcttacccaaaaccttaacgcaatg 14748417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 461
Target Start/End: Original strand, 12071678 - 12071765
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    |||||||||||  ||||| | | ||||| |||| ||||||||||||| |||  | |||||| ||||||||||| | ||||||||||||    
T  12071678 tgaggggagcttaggggaccgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaagg 12071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 462
Target Start/End: Complemental strand, 26544230 - 26544132
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||| |||||||||||   | |||||||||| |||||||| | || |||||| ||||||| ||||||||||   |||||||||||||    
T  26544230 tgttgggtcactg-gggaagctcgggggactcttcacattgaggctagaacaatcgcacaagcaagagagacatcacactcttactcaaaaccttaaggc 26544132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Complemental strand, 3409451 - 3409405
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacac 441  Q
    ||||||| |||| |||||||||| ||||||||| |||||||||||||    
T  3409451 tccacatcgaggctagaacaaccgcataagcaagagagacaccacac 3409405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 21130103 - 21130137
Alignment:
Q  433 acaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||||||||||| ||||||||||||||||||    
T  21130103 acaccacactcttatccaaaaccttaaggcaatgg 21130137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 11637763 - 11637804
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  11637763 agagacaccacactcttatccaaaatcttaagacaatgggtt 11637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 467
Target Start/End: Original strand, 12085050 - 12085114
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||| ||||||||||||| |||  | |||||| ||||||||||| | ||||||||||||| ||||    
T  12085050 gaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggccatgg 12085114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 16108233 - 16108150
Alignment:
Q  363 tgttgggacactgaggggagctcgg-gggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactctta 446  Q
    ||||||| ||||| ||||||||||| |||| | ||||||| |||| || ||||||| || |||||| ||||||||||||| ||||    
T  16108233 tgttgggtcactg-ggggagctcggagggaccgtccacatcgaggttataacaaccccacaagcaagagagacaccacaccctta 16108150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 22567026 - 22567118
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||||| ||||||||| ||||   |||||||| || |||||| |||||||||||||||||| |||||||||||||||||||    
T  22567026 tgaggggagctcgggggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatg 22567118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 375 - 467
Target Start/End: Original strand, 37533352 - 37533444
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||||| ||||||| | ||||||| |||| |||||||||| || ||||||||||||||||||||||||| | ||||||||||||||||||    
T  37533352 gaggggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatgg 37533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 30244439 - 30244345
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||| ||||||||| |||| | ||||||||||| |||  | |||||||||||||||||| | |||||||||||||||||||||    
T  30244439 aggggagctcgggggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtt 30244345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 1085603 - 1085699
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||  |||||| | ||||||| |||| ||||||||||||| ||| || |||||| ||||||||||| | |||||||||||||||||||||    
T  1085603 tgaggggagccagggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtt 1085699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 363 - 467
Target Start/End: Complemental strand, 11845372 - 11845269
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||| ||||||| | || |||| |||| |||||||||  || |||||| |||||||||||||||||||| |||||||||||||    
T  11845372 tgttgggtcactg-ggggagcacgggggaccgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaaggc 11845274  T
Q  463 aatgg 467  Q
    |||||    
T  11845273 aatgg 11845269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 30245243 - 30245156
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||||| ||||||||| |||| | ||||||||||| |||    |||||||||||||||||| | |||||||||||||||||    
T  30245243 gaggggagctcgggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactcttacccaaaaccttaaggcaatg 30245156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 30253658 - 30253571
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||||| ||||||||| |||| | ||||||||||| |||    |||||||||||||||||| | |||||||||||||||||    
T  30253658 gaggggagctcgggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactcttacccaaaaccttaaggcaatg 30253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 470
Target Start/End: Original strand, 23368 - 23460
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||| | |||| || |||| |||||||||| || | |||| |||||||||||||||||| | |||||||||||||||| ||||    
T  23368 gggagctcgggggaccgtccaaatcgaggctagaacaaccgcacatgcaagagagacaccacactcttacccaaaaccttaaggcaataggtt 23460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 7517762 - 7517655
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||  ||||||||||||   ||||| || |||||| |||| ||||||||||||| |||  | | |||||||||||||||| | |||||||||||||    
T  7517762 tgttgggttactgaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggc 7517663  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  7517662 aatgggtt 7517655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 36939739 - 36939813
Alignment:
Q  393 catccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||||| |||| |||||||||| ||||||||| ||| |||||||||| ||| | ||||||||||||||||||    
T  36939739 catccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatgg 36939813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 464
Target Start/End: Complemental strand, 47129539 - 47129450
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaa 464  Q
    |||||||||||||||| | | ||||||| |||| |||| ||||| || |||||| |||||||||||||||||| | |||||||||||||||    
T  47129539 tgaggggagctcgggg-accgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 30032735 - 30032650
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||||||||||| | ||||||| ||||||||||||||| || |||||| |||||   |||||||||| | |||||||||||||    
T  30032735 ggggagctcgggggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggc 30032650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 34218024 - 34218117
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| ||| | ||||||| |||| | ||||||||| | |||| | |||||||||||||||||| | ||||||||||| |||||||||    
T  34218024 ggggagctcggaggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtt 34218117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 37167960 - 37167859
Alignment:
Q  366 tgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    |||| ||||| ||||||| ||| ||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | ||||| ||||| ||||    
T  37167960 tgggtcactggggggagcgcggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaactttaagtcaat 37167861  T
Q  466 gg 467  Q
    ||    
T  37167860 gg 37167859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 45754850 - 45754790
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| |||||| |||||||||||||||||| | ||||||||||||| |||||||    
T  45754850 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtt 45754790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 467
Target Start/End: Complemental strand, 19122868 - 19122809
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||||||||| |||||| | |||||||||||||||| | ||||||||||||||||||    
T  19122868 tagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatgg 19122809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 45433411 - 45433316
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||  |||||| |  |||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||| ||||||||||| ||||    
T  45433411 gaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtt 45433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 6054725 - 6054639
Alignment:
Q  380 gagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||| | |||||||  ||| ||||||||||| | ||| |  |||||||||||||||||| | |||||||||||||||||    
T  6054725 gagctcgggggaccgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaaggcaatg 6054639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 37533002 - 37533089
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| ||||||| | ||||||| |||| |||||||| | || |||||| |||||||||||||| ||| | |||||||||||||||||    
T  37533002 gggagcgcgggggaccgtccacatcgaggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatg 37533089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 28300569 - 28300644
Alignment:
Q  388 gggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactctta-tcaaaaaccttaaggc 462  Q
    |||||| ||||||| |||| ||||| ||||||| |||||| ||||||||||||||||||  | |||||||||||||    
T  28300569 gggatcgtccacatcgaggctagaataaccacacaagcaagagagacaccacactcttaccccaaaaccttaaggc 28300644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 470
Target Start/End: Original strand, 40094770 - 40094857
Alignment:
Q  383 ctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |  |||||| |||| |||||||||| || |||||| |||||| ||||||||||| | ||||||||||| | |||||||    
T  40094770 ctcgggggaccgaccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtt 40094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 8128462 - 8128524
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | || ||||||||||||||| | ||||||||||||  |||||||    
T  8128462 tagaacaaccacataagcgagagtgacaccacactcttaaccaaaaccttaaggttatgggtt 8128524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Complemental strand, 24177568 - 24177510
Alignment:
Q  412 acaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| || |||||| |||||| ||||||||||| ||||||| |||||||||||||||    
T  24177568 acaaccgcacaagcaagagagacgccacactcttaccaaaaactttaaggcaatgggtt 24177510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 16569312 - 16569271
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  16569312 agagacaccgcactcttaccaaaaaccttaaggcaatgggtt 16569271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 16596350 - 16596391
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  16596350 agagacaccgcactcttaccaaaaaccttaaggcaatgggtt 16596391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 29157687 - 29157643
Alignment:
Q  423 agcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||    
T  29157687 agcaagagagacaccacactcttacccaaaaccttaaggcaatgg 29157643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 9901785 - 9901722
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||| |||||||||| ||  ||||| |||||||||||||||||| | ||||||||||| |||||    
T  9901785 gaggctagaacaaccgcactagcaagagagacaccacactcttacccaaaaccttaagacaatg 9901722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 7554154 - 7554100
Alignment:
Q  416 ccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| | |||||||||||||||||| | ||||||||||||| |||||||    
T  7554154 ccacacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtt 7554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 457
Target Start/End: Original strand, 37532739 - 37532821
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaacctt 457  Q
    ||||||||| ||| ||| | ||||||| |||| |||||||||  || |||| | |||||||||||||||||| | ||||||||    
T  37532739 gaggggagcgcggaggaccgtccacatcgaggctagaacaacagcacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 14681626 - 14681585
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | ||||||||||| |||||||||    
T  14681626 agagacaccacactcttacccaaaaccttaagacaatgggtt 14681585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 21416183 - 21416224
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | |||||| ||||||||||||||    
T  21416183 agagacaccacactcttacccaaaaccctaaggcaatgggtt 21416224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 23569044 - 23569085
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||||||||| | |||||||||||||||||||||    
T  23569044 agagacatcacactcttacccaaaaccttaaggcaatgggtt 23569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 24838724 - 24838784
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| |||||| ||||||  |||||||||| | ||||||||||| ||| |||||    
T  24838724 gaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtt 24838784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 28300276 - 28300336
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||   |||| |||||| ||||||||||| | |||| ||||||||||||||||    
T  28300276 gaacaaccacacttgcaagagagacgccacactcttacccaaaatcttaaggcaatgggtt 28300336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 30245324 - 30245256
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactct 444  Q
    ||||||||  |||||| | |||||||||||| | ||||||||||| |||  | ||||||||||||||||    
T  30245324 aggggagcatgggggaccgtccacattgaggcttgaacaaccacacaagtgagagagacaccacactct 30245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 3135453 - 3135537
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3135453 gggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggtt 3135537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 466
Target Start/End: Original strand, 37990615 - 37990718
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| || ||||| |||||||||||| | ||||||| |||| |||||||| |||| |||||| |||||||||||||||||| | |||||||||||||    
T  37990615 tgttgggtcattgaggagagctcgggggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggc 37990714  T
Q  463 aatg 466  Q
    ||||    
T  37990715 aatg 37990718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 22303962 - 22304038
Alignment:
Q  394 atccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| |||| ||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  22303962 atccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggcaatgggtt 22304038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 15773004 - 15772933
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||    
T  15773004 tccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatg 15772933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 29644890 - 29644985
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| |||||| | ||||||| |||| || ||||||| ||||||||| |||||| ||||||||||| | ||||||||||| |||||||||    
T  29644890 gaggggagcttgggggaccgtccacatcgaggctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtt 29644985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 462
Target Start/End: Original strand, 37990985 - 37991052
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  37990985 tccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggc 37991052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 41359465 - 41359574
Alignment:
Q  361 tatgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    ||||||||| ||  ||||||||   |||||| | |||||||||||| |||||||||| || ||||||||||||| ||||||||||| | |||||||||||    
T  41359465 tatgttgggtcagcgaggggagtctgggggaccgtccacattgaggctagaacaaccgcacaagcaaaagagacgccacactcttacccaaaaccttaag 41359564  T
Q  461 gcaatgggtt 470  Q
    |  |||||||    
T  41359565 gttatgggtt 41359574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 43346777 - 43346870
Alignment:
Q  374 tgaggggagct-cgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||| ||| ||| | ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||    
T  43346777 tgaggggagcttcggaggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 43346870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 467
Target Start/End: Original strand, 42342364 - 42342468
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| |||| ||||||||  |||||| | |||||||||||| |||||||||| || |||||| ||||||  |||||||||| | ||||||||||| |    
T  42342364 tgttgggtcactaaggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagac 42342463  T
Q  463 aatgg 467  Q
    |||||    
T  42342464 aatgg 42342468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 29644569 - 29644664
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| | |||||| ||||||||| || | || ||||||| ||||||||| |||||| ||||||||||| | ||||||||||| |||||||||    
T  29644569 gaggggagtttgggggaccatccacatcgaagctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtt 29644664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 39934959 - 39935038
Alignment:
Q  391 atcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||| ||||||||||   ||||| |||||||||||||||    
T  39934959 atcatccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtt 39935038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 32462910 - 32462983
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| |||||||||| || |||||| ||||||||||||||||||   |||||||||||||||||||||    
T  32462910 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtt 32462983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 32589862 - 32589778
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||  ||||||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||||||    
T  32589862 gggggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtt 32589778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 42342081 - 42342169
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||| |||| ||| | ||||||| |||| |||||||||| || |||||| |||||| ||||||||||| | |||||||||||||||||    
T  42342081 gggagttcggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatg 42342169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 15773365 - 15773271
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaa--aagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||| | || ||||| ||||||| |||| ||||||||||||| ||||||  |||||||| |||||||||| | ||||| |||||||||||    
T  15773365 tgaggggagttaggaggatcgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatg 15773271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 22304719 - 22304648
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||  |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||    
T  22304719 tccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 22304648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 470
Target Start/End: Original strand, 54017572 - 54017631
Alignment:
Q  411 aacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||||||| || |||||||||||||||||| | |||||||||||||||||||||    
T  54017572 aacaatcacataagtaatagagacaccacactcttacccaaaaccttaaggcaatgggtt 54017631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 41359774 - 41359848
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| |||| ||||||||||||| |||| | |||||| ||||| ||||| | |||||||||||||||||||||    
T  41359774 ccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtt 41359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 53577530 - 53577444
Alignment:
Q  379 ggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    |||| |||||||| ||||||||  |||| |||||||||||||   |||| |||||||||||||||||| | || |||||||||||||    
T  53577530 ggagttcgggggaccatccacaccgaggctagaacaaccacacttgcaagagagacaccacactcttacccaagaccttaaggcaat 53577444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 54018207 - 54018273
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||| |||| ||||||||||||| |||||  |||||||||||||||||| | |||||||||||||    
T  54018207 ccacatcgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggc 54018273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 1634299 - 1634397
Alignment:
Q  371 cactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||| |||||| | ||||||| |||| ||||||||||| || ||  | ||||| ||| |||||||| | ||||||||||| |||||||||    
T  1634299 cactgaggggagctagggggaccgtccacatcgaggctagaacaaccatat-agtgagagagataccgcactcttacccaaaaccttaagccaatgggtt 1634397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 52634856 - 52634750
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| |||||||||||||||   || ||||  ||| |||||||||  || |||||| ||||||  |||||||||| | |||||||||||||    
T  52634856 tgttgggtcactg-ggggagctcgggggacagtctacatcaaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggc 52634758  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  52634757 aatgggtt 52634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 462
Target Start/End: Original strand, 54017793 - 54017891
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| |||||||  |||||| |  |||||| || | ||||||||||||| ||| || |||||||||||||||||| | |||||||||||||    
T  54017793 tgttgggtcactg-ggggagccagggggaccgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaaggc 54017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 4823792 - 4823734
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| || ||||||||||| |||||||||||||||| | |||| ||||||||||||    
T  4823792 tagaacatccgcataagcaaaaaagacaccacactcttacccaaaatcttaaggcaatg 4823734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 12114583 - 12114645
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| || ||| || |||||||||||||||||| | ||||||||||| |||||||||    
T  12114583 tagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtt 12114645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 12749306 - 12749244
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||||| || || ||  |||||||||||||||||||||||| ||||| ||||    
T  12749306 tagaacaaccacataagtaagagtgagtccacactcttatcaaaaaccttaatgcaattggtt 12749244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 31190151 - 31190085
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggt 469  Q
    |||| ||||||||||  | |||||| |||||||||||||||||| | ||||||||||||| ||||||    
T  31190151 gaggctagaacaacccgacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggt 31190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 35946706 - 35946597
Alignment:
Q  361 tatgttgggacactgaggggagctc-gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    ||||||||| ||||| ||||||||  |||||| | ||||||| |||| ||||||||   || |||||| |||||||||||||| ||| | ||||||||||    
T  35946706 tatgttgggtcactg-ggggagctttgggggaccgtccacatcgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaaccttaa 35946608  T
Q  460 ggcaatgggtt 470  Q
    ||||| |||||    
T  35946607 ggcaacgggtt 35946597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 39389191 - 39389145
Alignment:
Q  424 gcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||    
T  39389191 gcaaaagagacaccacactcttacccaaaaccttaagacaatgggtt 39389145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 22303670 - 22303742
Alignment:
Q  398 acattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||| |||||||| | || ||| || ||| |||||||||||||| | |||||||||||||||||||||    
T  22303670 acatcgaggctagaacaatcgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggtt 22303742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 49336662 - 49336746
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaa-agagacaccacactctta 446  Q
    ||||||| ||||||| | |||| |||| |  |||||||||||||||||||||||| || ||  ||| ||||||||||||||||||    
T  49336662 tgttgggtcactgagagaagctaggggtacgatccacattgaggatagaacaaccgcacaaaaaaagagagacaccacactctta 49336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 45901864 - 45901797
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| || | ||||||||||  ||||| || |||||||||||||||||| ||||||| |||||||    
T  45901864 tccacatcgaagttagaacaaccctataagtaagagagacaccacactcttaccaaaaactttaaggc 45901797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 460
Target Start/End: Original strand, 50612446 - 50612520
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    |||||| | ||||| | |||||| ||||||||||  |||||| ||||||| |||||||||| | |||||||||||    
T  50612446 gggggaccgtccacgtcgaggatggaacaaccactcaagcaagagagacatcacactcttacccaaaaccttaag 50612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Original strand, 39336012 - 39336049
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||||| | |||||||||||||||||    
T  39336012 agagacaccacactcttacccaaaaccttaaggcaatg 39336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 39914399 - 39914334
Alignment:
Q  398 acattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||| |||| |||||||||| ||||||  | |||||||||||||||||||| ||||  ||||||||    
T  39914399 acatcgaggctagaacaaccgcataagtgagagagacaccacactcttatccaaaatattaaggca 39914334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 33803251 - 33803335
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| ||||||||||||| |||  |  ||||| ||||||||||| | || ||||||| ||||||||||    
T  33803251 gggggaccgtccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtt 33803335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 3669857 - 3669766
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||| |||||| ||||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||    
T  3669857 gaggggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 3669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 466
Target Start/End: Complemental strand, 34835033 - 34834955
Alignment:
Q  388 gggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||    
T  34835033 gggatcatccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 34834955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 3038265 - 3038373
Alignment:
Q  363 tgttgggacactgag-gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||| ||||||| |||||||||| ||| | ||||||| |||| ||||||||||||| |||||| |||||  ||||||||||| | ||||||||||||    
T  3038265 tgttgggtcactgagagggagctcggaggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaagg 3038364  T
Q  462 caatgggtt 470  Q
    |||||||||    
T  3038365 caatgggtt 3038373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 6732053 - 6731974
Alignment:
Q  387 ggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||||   |||||||||||||||||    
T  6732053 ggggatcatccacatcgaggttagaacaaccgcataagcaagagagacaccacactcttactcaaaaccttaaggcaatg 6731974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 9483163 - 9483270
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||| |||||||||||||  ||| | | ||||||| |||| |||||||||| ||  |||||||||||||||||||||||| | ||||||||||| |    
T  9483163 tgttgggatactgaggggagctatgggaaccgtccacatcgaggctagaacaaccgcacgagcaaaagagacaccacactcttacccaaaaccttaagac 9483262  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  9483263 aatgggtt 9483270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 8919143 - 8919220
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||| | ||||||| || | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8919143 gggggaccgtccacatcgaagctagaacaaccacacaagcaaaagagacaccacactcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 40518239 - 40518146
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||| | |||||||  ||| ||||||||||||| |||||| |||||| ||||||||||| | |||||||||||||| ||||||    
T  40518239 ggggagctcgggggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtt 40518146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 376 - 473
Target Start/End: Original strand, 40579258 - 40579355
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggttcaa 473  Q
    ||||||||||||||||   ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||| | |||||||||||||||||    
T  40579258 aggggagctcgggggacagtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaatcctaaggcaatgggttcaa 40579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 30441235 - 30441160
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  30441235 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtt 30441160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 6651662 - 6651573
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| | |||||| ||||||||| |||| |||||||| | || |||||| |||||||||||||||||| | |||||||||||||||||    
T  6651662 ggggagttagggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 6651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 30359454 - 30359346
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatc-atccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||| || ||||||||||||| |||| | ||||||||||||| || ||||||  || ||| || |||||||||||||||||| | ||||||||||||    
T  30359454 tgttgggtcattgaggggagctcgagggaaccatccacattgaggctaaaacaacatcacaagaaagagagacaccacactcttacccaaaaccttaagg 30359355  T
Q  462 caatgggtt 470  Q
    | |||||||    
T  30359354 ctatgggtt 30359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 5916017 - 5915946
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||    
T  5916017 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 5915946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 20870594 - 20870656
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||||    
T  20870594 tagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtt 20870656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 6876852 - 6876941
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||| | ||||||| |||| ||||||||||||| || ||| ||| |||||||||||||| | |||||| |||| |||||    
T  6876852 ggggagctcgggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatg 6876941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 9482583 - 9482687
Alignment:
Q  366 tgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    ||||||||||||||||| |  ||| | | ||||||| |||| |||||||||| || |||||| ||||| |||||||||||||  |||| ||| |||||||    
T  9482583 tgggacactgaggggagttatgggaaccgtccacatcgaggctagaacaaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaat 9482682  T
Q  466 gggtt 470  Q
    |||||    
T  9482683 gggtt 9482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 40579508 - 40579584
Alignment:
Q  389 ggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    ||||| ||||||| |||||||||||||||  | |||||| |||||||||||||||||| | |||||||||| |||||    
T  40579508 ggatcgtccacatcgaggatagaacaaccgtacaagcaatagagacaccacactcttacctaaaaccttaaagcaat 40579584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 3670210 - 3670135
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||||| || |||||| |||||||||||||||||| | |||||||||||| ||| ||||    
T  3670210 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtt 3670135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 147968 - 147895
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| |||||||||  || ||| || |||||||||||||||||| | |||||||||||||||| ||||    
T  147968 cacattgaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaaccttaaggcaataggtt 147895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 1014234 - 1014319
Alignment:
Q  377 ggggagctcgggggatc-atccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||||||||||| | |||||||| |||| |||||||||| || |||||  |||||||||||||||||| | ||||| ||||||    
T  1014234 ggggagctcgggggaaccatccacatcgaggctagaacaaccgcacaagcaggagagacaccacactcttacccaaaactttaagg 1014319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 32640542 - 32640615
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| |||||||| |||| |||||| |||||| | ||||||||| | |||||||||||||||||||||    
T  32640542 cacatcgaggctagaacaatcacaaaagcaagagagacgcaacactcttacccaaaaccttaaggcaatgggtt 32640615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 467
Target Start/End: Complemental strand, 41129159 - 41129066
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||||||  |||||| | ||||||| |||| | ||||||||||| ||| || ||||||||||||||| || | ||||||||||| ||||||    
T  41129159 tgaggggagcctgggggaccgtccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaagacaatgg 41129066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 470
Target Start/End: Complemental strand, 40518749 - 40518657
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| | ||| | |||||||||||| ||||||||||||| |||||| || |||  |||||||||| | ||||||||||| || ||||||    
T  40518749 gggagctcagaggaccgtccacattgaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtt 40518657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 470
Target Start/End: Original strand, 70286 - 70357
Alignment:
Q  399 cattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| ||||||||||||| |||||| | ||||  |||||||||| | |||||||||||||| ||||||    
T  70286 cattgaggttagaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtt 70357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 9309535 - 9309434
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||||||| |   | |||||||||||||||||| |  | ||||||||||    
T  9309535 tgttgggtcactg-ggggagctcgggggaccgtccacatcgaggctagaacaaccacat-actgagagagacaccacactcttacccgacaccttaaggc 9309438  T
Q  463 aatg 466  Q
    ||||    
T  9309437 aatg 9309434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 33113379 - 33113446
Alignment:
Q  399 cattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||  |||||||||||||  ||||| |||||||||||||||||| | |||| ||||||||||||    
T  33113379 cattgagcctagaacaaccacactagcaagagagacaccacactcttacccaaaatcttaaggcaatg 33113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 1013877 - 1013954
Alignment:
Q  393 catccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||| |||||||||| || ||| |||||||||| ||||||||||   |||||  ||||||||||||||    
T  1013877 catccacatcgaggctagaacaaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtt 1013954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 18371980 - 18372073
Alignment:
Q  374 tgaggggagctcgggggatca-tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||||||||| |  | |||||||||| |||| ||||| || |||| | ||| |||||||||||||| | |||||||||| ||||||    
T  18371980 tgaggggagctcgggggaaccgttcacattgaggctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatg 18372073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 34835377 - 34835288
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||  |||||| | || |||| |||| ||||| ||||||| |||||| || ||||||||||||||| | ||||| |||||||||||    
T  34835377 ggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatg 34835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 34835643 - 34835554
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||  |||||| | || |||| |||| ||||| ||||||| |||||| || ||||||||||||||| | ||||| |||||||||||    
T  34835643 ggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatg 34835554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 34835909 - 34835820
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||  |||||| | || |||| |||| ||||| ||||||| |||||| || ||||||||||||||| | ||||| |||||||||||    
T  34835909 ggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatg 34835820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 37544478 - 37544562
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    |||||||| ||||||| ||| ||||||| |||| |||||||||| || ||| || | |||||||||||||||| | ||||||||||    
T  37544478 tgaggggaactcgggg-atcgtccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaa 37544562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 43274626 - 43274691
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactc 443  Q
    |||||||||||||| | ||||||| |||| | |||||||| |||||| || |||||||||||||||    
T  43274626 gggagctcgggggaccgtccacatcgaggctggaacaaccccataagtaagagagacaccacactc 43274691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 12284021 - 12283957
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    |||||| |||| ||||||||||||| |||  | |||||||| ||||||||||| |||||||||||    
T  12284021 ccacatagaggctagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaag 12283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 45122783 - 45122703
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| | ||||||| |||| | ||||||||||| |||||| |||||| |||||||| || | ||||||||||| |||||    
T  45122783 gggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatg 45122703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 9507932 - 9507857
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| | ||||||||| |||||  | |||||| ||||||||||| | |||||||||||| ||||||||    
T  9507932 tccacatcgaggcttgaacaaccatataagagatagagacgccacactcttacccaaaaccttaaggtaatgggtt 9507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 9609223 - 9609160
Alignment:
Q  407 atagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||  ||||| |||||| ||||||||||| | ||||| ||||||| |||||||    
T  9609223 atagaacaaccacactagcaagagagacgccacactcttaccgaaaacattaaggcgatgggtt 9609160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 30359759 - 30359684
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| || | |||||||||| |||||| || |||||||||||||||||| | |||| |||||||  |||||||    
T  30359759 tccacatcgaagttagaacaaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtt 30359684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 45121898 - 45121989
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||  |||||| | ||||||| |||| | ||| |||||||  |||||||||||| ||||||| ||| | |||| ||||||||||||    
T  45121898 gaggggagcctgggggaccttccacatcgaggcttgaataaccacacgagcaaaagagacgccacactgttacccaaaatcttaaggcaatg 45121989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 460
Target Start/End: Original strand, 45122067 - 45122130
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    ||||| |||| |||||||||| || ||| || |||||||||||||||||| | |||||||||||    
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaag 45122130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 420
Target Start/End: Original strand, 3037944 - 3038002
Alignment:
Q  363 tgttgggacactgagggg-agctcgggggatcatccacattgaggatagaacaaccaca 420  Q
    ||||||| |||||||||| ||||||||||| | ||||||| |||| |||||||||||||    
T  3037944 tgttgggtcactgagggggagctcgggggaccgtccacatcgaggctagaacaaccaca 3038002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 9309149 - 9309054
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacact---cttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||||||| | ||||||| |||| ||||||||||||||| |  | ||||||||||||||   |||  | |||||||| ||||||||||||    
T  9309149 ggggagctcgggggaccgtccacatcgaggctagaacaaccacata-gtgagagagacaccacactactcttgcccaaaacctttaggcaatgggtt 9309054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 32305636 - 32305552
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | |||||||  ||| |||||||||  |||||| || | |||| ||||||||||||| |||| ||||||| ||||||||    
T  32305636 gggggaccgtccacatcaaggttagaacaactgcataagtaataaagacgccacactcttatccaaaatcttaaggtaatgggtt 32305552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 381 - 468
Target Start/End: Original strand, 54343000 - 54343087
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatggg 468  Q
    ||||||||||| ||||||||| |||| ||||||||||||  |||||| |||||||||||||||||| | |||||||||||||||||||    
T  54343000 agctcgggggaccatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaaggcaatggg 54343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 54017583 - 54017676
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| ||| || | ||||||| |||| |||||||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||    
T  54017583 ggggagctagggagaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtt 54017676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 39792845 - 39792937
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||||||||| | ||| | ||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||    
T  39792845 tgaggggagctcagaggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatg 39792937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 25483486 - 25483411
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||||    
T  25483486 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtt 25483411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 466
Target Start/End: Complemental strand, 36629418 - 36629316
Alignment:
Q  364 gttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||| || ||||||||||  | |||| | ||||||| |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||    
T  36629418 gttgggtcattgaggggagcatgtgggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 36629319  T
Q  464 atg 466  Q
    |||    
T  36629318 atg 36629316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 39404189 - 39404104
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    |||||||||||||||||| | ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||| | ||||||||||    
T  39404189 tgaggggagctcgggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaa 39404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 1731653 - 1731728
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||| ||||||||||||| |||||| ||| |||||||||||||| | |||||||||||||||| ||||    
T  1731653 tccacattgaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtt 1731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 49303064 - 49302981
Alignment:
Q  387 ggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| ||||||| ||||||||||||| | |||||| || ||| |||||||||||||| | |||||||||||||||||||||    
T  49303064 ggggatcgtccacatcgaggatagaacaatcgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtt 49302981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 54936376 - 54936271
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| |||||||||||||||   ||||||| |||| ||||||||||||||| |  | |||||||||||||||||| | |||||||||||||    
T  54936376 tgttgggtcactg-ggggagctcgggggactgtccacatcgaggctagaacaaccacata-gtgagagagacaccacactcttacccaaaaccttaaggc 54936279  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  54936278 aatgggtt 54936271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 54108686 - 54108616
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||| ||||||||||||| |||||| | |||||||||||||||| | |||||||||||||||||    
T  54108686 ccacattgaggctagaacaaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatg 54108616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 50630731 - 50630836
Alignment:
Q  365 ttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaa 464  Q
    ||||| || ||||||||||| || ||| |  |||||| |||| || ||||||| || |||||| |||||||||||||||||| | |||||||||||||||    
T  50630731 ttgggtcagtgaggggagctaggcggaccgcccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 50630830  T
Q  465 tgggtt 470  Q
    ||||||    
T  50630831 tgggtt 50630836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 466
Target Start/End: Original strand, 22028342 - 22028446
Alignment:
Q  363 tgttgggacactgaggggagctc-gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||| || |||||||||||  |||||| | |||||||||||| |||||||||| || |||||| |||||||||||||||||| | ||||| |||||     
T  22028342 tgttgggtcagtgaggggagctttgggggaccgtccacattgaggctagaacaacctcacaagcaagagagacaccacactcttacccaaaacattaaga 22028441  T
Q  462 caatg 466  Q
    |||||    
T  22028442 caatg 22028446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 23817678 - 23817758
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| | ||||||| |||| |||||||||||||  ||||| |||||||||||||||||| | |||||||||||||||||    
T  23817678 gggggaccgtccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggcaatg 23817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 43827610 - 43827519
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| ||||||||||| | ||||||| |||| |||||||||| || ||| || ||||||||||||||||||||  ||||||||||||||||    
T  43827610 tgagggaagctcgggggaccgtccacatcgaggttagaacaaccgcacaagtaagagagacaccacactcttatc-caaaccttaaggcaatg 43827519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 3340988 - 3340882
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||| || || | ||||||| |||| |||||||||| || |||||| | |||||||||||||||| | |||||||||||||    
T  3340988 tgttgggtcactg-ggggagctcaggagaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggc 3340890  T
Q  463 aatgggtt 470  Q
    | ||||||    
T  3340889 agtgggtt 3340882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 10246089 - 10246002
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||||| |||||| | ||||||| |||| ||||||||||| | ||||||  ||||||||||||||||| | |||||||||||||    
T  10246089 gaggggagcttgggggagcgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaaggc 10246002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 41370538 - 41370432
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||| || |||||||| | ||||||| |||| ||||||||||||  |||||| |||||||| ||||||||| | ||||| |||||||    
T  41370538 tgttgggtcactg-gggaagttcgggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacactacactcttacccaaaactttaaggc 41370440  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  41370439 aatgggtt 41370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 461
Target Start/End: Complemental strand, 44620830 - 44620743
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    ||||||||||| |||||| | ||||||| ||||||| ||||||| || |||||| ||||| |||||||||||| | ||||||||||||    
T  44620830 tgaggggagcttgggggaccgtccacatcgaggatataacaaccgcacaagcaagagagaaaccacactcttacccaaaaccttaagg 44620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 18932741 - 18932830
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| | | ||||| |||| || |||||||||  ||| || |||||||||||||||||| | |||||||||||||||||||||    
T  18932741 agctcgggggaccgtacacatcgaggctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggtt 18932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 467
Target Start/End: Original strand, 50788003 - 50788072
Alignment:
Q  398 acattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    ||||||| | |||| |||||| |||||| | |||||||||||||||||||| ||||||||||||||||||    
T  50788003 acattgaagttagagcaaccaaataagcgacagagacaccacactcttatctaaaaccttaaggcaatgg 50788072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 467
Target Start/End: Original strand, 36608647 - 36608739
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||||| |||||| | ||||||| |||| |||||||||||||  ||  | |||||||||||||||||| | ||||||||||| ||||||    
T  36608647 gaggggagcttgggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatgg 36608739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 44620503 - 44620428
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||  ||| ||||||||||||| |||||| ||| ||| |||||||||| | |||||||||||||||||||||    
T  44620503 tccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtt 44620428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 18879974 - 18879881
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||||| ||| | ||||||| || | ||||||||||||| || ||||||||||  |||||||||| | |||||||||||| ||| ||||    
T  18879974 ggggagctcggaggaccgtccacatcgaagctagaacaaccacacaaccaaaagagacgtcacactcttacccaaaaccttaaggaaataggtt 18879881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 50459869 - 50459796
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| ||||||||||||| |||||| ||||||||||| |||||| | |||||||||||  ||||||||    
T  50459869 cacatcgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtt 50459796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 22183261 - 22183345
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| ||||||||||  | |||  | |||||| ||||||||||||| |||||||||||||||||||||    
T  22183261 gggggaccgtccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtt 22183345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 467
Target Start/End: Complemental strand, 50002608 - 50002504
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| |||| ||||  | |||||||| |  |||||| |||| |||||||||| || ||| || |||||||||||||||||| | ||||||||||| |    
T  50002608 tgttgggtcacttagggtggttcgggggaccgcccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagac 50002509  T
Q  463 aatgg 467  Q
    |||||    
T  50002508 aatgg 50002504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 470
Target Start/End: Original strand, 55933113 - 55933205
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||||| | ||||||| |||| |||||||||   | ||| || |||||||||||||||||| | ||||| |||||||||||||||    
T  55933113 gggagcttgggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtt 55933205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 32941129 - 32941200
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| |||||||||| || |||||| ||||||  |||||||||| | |||||||||||||||||    
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatg 32941200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 459
Target Start/End: Original strand, 45489331 - 45489402
Alignment:
Q  388 gggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaa 459  Q
    |||| ||||||||| |||| |||||||| ||||  ||||||||||||| |||||||||| |||||| |||||    
T  45489331 gggaccatccacatcgaggctagaacaatcacactagcaaaagagacatcacactcttaccaaaaatcttaa 45489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 22027983 - 22028037
Alignment:
Q  411 aacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    ||||||||||||||| | |||||||||||| ||||| | ||||||||||||||||    
T  22027983 aacaaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaat 22028037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 52884844 - 52884770
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactctta-tcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| |||| ||||| || |||||| ||||||||||||||||||  | |||||||||||||||||||||    
T  52884844 cacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtt 52884770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 54109049 - 54108988
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| || |||||| |||||||||||||||||| | |||| ||||||||||||||||    
T  54109049 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaa-cttaaggcaatgggtt 54108988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 2740869 - 2740783
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||||||||||||| |||||| || |||| ||||||||||||  |||  | |||||| |||||||||||   |||||||||||||    
T  2740869 tgaggggagctcgggggaccatccatatcgaggctagaacaaccac--aagtgagagagacgccacactcttacgtaaaaccttaaggc 2740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 39404546 - 39404481
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||| |||| ||||||||||||| |||||| |||||||||||| ||||  | |||||||||||||    
T  39404546 cacatcgaggctagaacaaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggc 39404481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 470
Target Start/End: Original strand, 49076820 - 49076912
Alignment:
Q  378 gggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||| |||||   ||||||| |||| |||||||||| || |||||| | |||||||||||||| | | ||||||||||||  |||||||    
T  49076820 gggagctcaggggacagtccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtt 49076912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 20825986 - 20825919
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||||  ||| |||||||||| |||||| || ||| |||||||||||||| | |||||||||||||    
T  20825986 tccacatcaaggctagaacaaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggc 20825919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 44621152 - 44621081
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| ||||| |||| || |||||| ||| |||||||||||||| | ||||||||||| |||||    
T  44621152 tccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatg 44621081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 467
Target Start/End: Original strand, 48111693 - 48111776
Alignment:
Q  384 tcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||| | |||||||||||| ||||| ||||||||  |  | ||||||||||||||| || | |||||||||||| |||||    
T  48111693 tcgggggaccgtccacattgaggttagaaaaaccacatttgtgagagagacaccacactcatacctaaaaccttaaggtaatgg 48111776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 4955336 - 4955398
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| ||||| || ||| || |||||| ||||||||||| | |||||||||||||||||||||    
T  4955336 tagagcaaccgcacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtt 4955398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 19504838 - 19504776
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    |||| ||||||||||||| |||||| | |||| ||||||||||| | ||||| ||||||||||    
T  19504838 gaggctagaacaaccacacaagcaagatagacgccacactcttacccaaaactttaaggcaat 19504776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 34646668 - 34646726
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||| |  | | |||||||||||||||||| | |||||||||||||||||    
T  34646668 tagaacaaccacacagaccagagagacaccacactcttacccaaaaccttaaggcaatg 34646726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 45496934 - 45496884
Alignment:
Q  416 ccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||| |||||| |||||||||||||||||| | ||||||||||| |||||    
T  45496934 ccacacaagcaagagagacaccacactcttacccaaaaccttaagacaatg 45496884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 49880296 - 49880235
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||||| ||| ||||||||||| |||||| | |||||||||||||| ||||||    
T  49880296 tagaacaac-acataaacaagagagacaccacgctcttacccaaaaccttaaggcagtgggtt 49880235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 10396532 - 10396491
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||||||||||||| |||||| ||||||||||||||    
T  10396532 agagagaccacactcttatccaaaaccctaaggcaatgggtt 10396491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 11197342 - 11197301
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| | |||||| ||||||||||||||    
T  11197342 agagacaccacactcttacccaaaaccctaaggcaatgggtt 11197301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 40067181 - 40067128
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaagg 461  Q
    |||||||||||||||||||| ||||||| |||||| ||| | |||| |||||||    
T  40067181 tagaacaaccacataagcaagagagacatcacacttttacccaaaatcttaagg 40067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 43174309 - 43174240
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactctta 446  Q
    ||||||||||||||| | |||||||  ||| | ||||||||||| |||  | ||||||||||||||||||    
T  43174309 ggggagctcgggggaccgtccacatcaaggcttgaacaaccacacaagtgagagagacaccacactctta 43174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 31691322 - 31691231
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaaga--gacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||  ||||| ||||||| |||| |||||||| |  | |||||| |||  ||| ||||||||||| | |||||||||||||||||    
T  31691322 ggggagctcgaaggatcgtccacatcgaggctagaacaatcgtacaagcaagagatagacgccacactcttacccaaaaccttaaggcaatg 31691231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 1083 - 1189
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| |||||||| |||| | | ||||||| |||| |||||||||||||||| ||| |||||||||| ||||||| | |||||||||||||    
T  1083 tgttgggtcactg-ggggagcttggggaaccgtccacatcgaggctagaacaaccacataaacaagagagacaccatactcttacccaaaaccttaaggc 1181  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  1182 aatgggtt 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 1733 - 1774
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1733 agagacaccacactcttaccaaaaaccttaaggcaatgggtt 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 45493951 - 45494057
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| || || |||||||| |||||| | ||||||| |||| | ||||||||||||||| || |||||||||||||||||||| ||||| |||||||    
T  45493951 tgttgggtcattggggggagct-gggggaccgtccacatcgaggcttgaacaaccacataaggaagagagacaccacactcttatccaaaactttaaggc 45494049  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  45494050 aatgggtt 45494057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 41142541 - 41142447
Alignment:
Q  377 ggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactc-ttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| ||||||||| | ||||||| |||| ||||||||||||| |||||| |||||| |||||||| ||| |||||||||||||||||||||||    
T  41142541 ggggaactcgggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtt 41142447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 41759633 - 41759561
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgg 467  Q
    |||||||  ||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  41759633 tccacatcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcaatgg 41759561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 44290800 - 44290908
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactc-ttatcaaaaaccttaagg 461  Q
    ||||||| || || ||||||||||||||| | ||||||| |||| |||||||||| || |||||| ||| ||||||||||| ||| | ||||||||||||    
T  44290800 tgttgggtcagtggggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaagg 44290899  T
Q  462 caatgggtt 470  Q
    |||||||||    
T  44290900 caatgggtt 44290908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 26661886 - 26661981
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| ||| || ||||| |||  ||||| ||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| ||||    
T  26661886 gaggggagctagggagaccatccgcatcaaggattgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtt 26661981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 40082588 - 40082485
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||||| |||  |||||||| |||| |||||||| | || |||||| ||||| |||||||||||| | |||||||||||||    
T  40082588 tgttgggtcactggggggagctcggaggactatccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggc 40082489  T
Q  463 aatg 466  Q
    ||||    
T  40082488 aatg 40082485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 44290435 - 44290541
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||||||||| | ||||||| |||| ||||||||||  | |||||| | |||||||| ||||||| | |||||||||||||    
T  44290435 tgttgggtcactg-ggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggc 44290533  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  44290534 aatgggtt 44290541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 5319976 - 5320040
Alignment:
Q  398 acattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||||    
T  5319976 acattgaggctagaacaaccacataagcaagagagacactacactcttacccaaaaccttaaggc 5320040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 17294748 - 17294652
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaacca-cataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||| || | ||||||| |||| |||| |||||  ||||||| | |||||||||||||||||| | |||||||||||||||||||||    
T  17294748 gaggggagctcgggcgaccgtccacatcgaggctagagcaacctgcataagcgagagagacaccacactcttacccaaaaccttaaggcaatgggtt 17294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 34364688 - 34364582
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||||||||| ||| | ||||||||| |||| |||| ||||| ||||||| | ||||||| |||||||||| | |||||||||||||    
T  34364688 tgttgggtcactg-ggggagctcagggaaccatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggc 34364590  T
Q  463 aatgggtt 470  Q
     |||||||    
T  34364589 tatgggtt 34364582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 37556260 - 37556186
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| |||| | ||||||||||| |||||| |||||||||||||||||| | ||||||||||||| |||||||    
T  37556260 ccacatcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtt 37556186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 39066221 - 39066279
Alignment:
Q  408 tagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||    
T  39066221 tagaacaaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatg 39066279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 41157140 - 41157070
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    |||||| |||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||| ||||||    
T  41157140 ccacatcgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatg 41157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 14319028 - 14318947
Alignment:
Q  384 tcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaat 465  Q
    |||||||| | |||||||||||| |||||||||| || ||  || |||||||||||||||||| | ||||||||||||||||    
T  14319028 tcgggggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaat 14318947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 3875318 - 3875414
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||| ||| | ||||||| |||| |||||||||||||  ||  | |||||| ||||| ||||| | |||||||||||||||||||||    
T  3875318 tgaggggagctcggaggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtt 3875414  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 3537607 - 3537682
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||||| || |||||| |||||| ||||||||||| | ||||||||||| |||||||||    
T  3537607 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtt 3537682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Complemental strand, 29798341 - 29798274
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||||||||||||   |||| |||||||||||||||||||| || ||||||||||||||||||    
T  29798341 gaggttagaacaaccacacttgcaagagagacaccacactcttatccaagaccttaaggcaatgggtt 29798274  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 32168706 - 32168781
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| |||| |||||||||| || |||||| |||||| ||||||||||| | ||||||| |||||||||||||    
T  32168706 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtt 32168781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 37555878 - 37555812
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    |||||| |||| | ||||||||||| |||||| |||||||||||||||||| | |||||||||||||    
T  37555878 ccacatcgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggc 37555812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 41157524 - 41157450
Alignment:
Q  396 ccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| |||| ||||||||||||| |||||| | ||||||||||||||||   ||||||| |||||||||||||    
T  41157524 ccacatcgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtt 41157450  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 34365077 - 34365000
Alignment:
Q  393 catccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||||| |||| |||| ||||  ||||||| | |||||||||||||||||| | ||||||||||||| |||||||    
T  34365077 catccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtt 34365000  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 50052012 - 50052096
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    |||||||||||||||||   ||||||| |||| ||||||||| |||||| ||| |||||||||||||||||| | ||||| |||||    
T  50052012 gaggggagctcgggggactgtccacatcgaggttagaacaac-acataaacaagagagacaccacactcttacccaaaactttaag 50052096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 463
Target Start/End: Complemental strand, 11977110 - 11977026
Alignment:
Q  379 ggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    ||||||||||||| | ||||||| |||| |||||| ||| ||   |||| |||||||||||||||||| | ||||||||||||||    
T  11977110 ggagctcgggggaccgtccacatcgaggctagaactaccgcacttgcaagagagacaccacactcttacccaaaaccttaaggca 11977026  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 447
Target Start/End: Original strand, 21378036 - 21378119
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttat 447  Q
    ||||||| ||||| ||||||| | ||||| | |||||||||||| ||||||||||||| |||||| | |||| ||||||||||||    
T  21378036 tgttgggtcactg-ggggagcgcaggggaccgtccacattgaggctagaacaaccacacaagcaatatagacgccacactcttat 21378119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 26661545 - 26661601
Alignment:
Q  410 gaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||||||| |||| | |||||||||||||||||| | |||||||||||||||||    
T  26661545 gaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatg 26661601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 48588496 - 48588567
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| |||||||||| || ||| || ||||||||| |||||||| | |||||||||||||||||    
T  48588496 tccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatg 48588567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 50051677 - 50051771
Alignment:
Q  375 gaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||| |||||| | ||||||| || | ||||||||| |||||| ||| ||||||||||||||||||   |||||||||||  ||||||||    
T  50051677 gaggggagctagggggaccgtccacatcgatgctagaacaac-acataaacaagagagacaccacactcttacgcaaaaccttaagataatgggtt 50051771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 463
Target Start/End: Complemental strand, 34649598 - 34649520
Alignment:
Q  385 cgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    ||||||| | ||||||| |||| |||||||||||||  ||||| |||||| || |||||||| | ||||||||||||||    
T  34649598 cgggggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggca 34649520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 9956057 - 9955984
Alignment:
Q  397 cacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||| |||| ||||| || |||||| ||||||| |||||||||| | |||||||||||||||| ||||    
T  9956057 cacatcgaggctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtt 9955984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 463
Target Start/End: Original strand, 31767148 - 31767237
Alignment:
Q  374 tgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||| |||| |||||| | ||||||| |||  ||||||||||||| |||||| | ||||  |||||||||| | ||||||||||||||    
T  31767148 tgagggaagcttgggggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggca 31767237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 5528743 - 5528827
Alignment:
Q  376 aggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    |||||||  |||||| |||||||||| ||||||||||||||| |||||  || |||||| ||||||  ||| | |||||||||||    
T  5528743 aggggagtccggggggtcatccacatcgaggatagaacaaccgcataaagaagagagacgccacacatttacccaaaaccttaag 5528827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 3550842 - 3550795
Alignment:
Q  423 agcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||| |||||||||||||||||| | ||||| |||||||||||||||    
T  3550842 agcaagagagacaccacactcttacccaaaactttaaggcaatgggtt 3550795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 11977441 - 11977362
Alignment:
Q  384 tcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||||| | ||||||| |||| |||||||||| ||   |||| ||||||| |||||||||| | ||||||||||||||    
T  11977441 tcgggggaccgtccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggca 11977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 38804371 - 38804438
Alignment:
Q  403 gaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||| |||||||||| || |||||| |||||||| ||||||||| | ||||||||||||  |||||||    
T  38804371 gaggctagaacaaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtt 38804438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 463
Target Start/End: Complemental strand, 12466399 - 12466365
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggca 463  Q
    |||||||||||||||||| ||||||||||||||||    
T  12466399 agagacaccacactcttaccaaaaaccttaaggca 12466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 460
Target Start/End: Complemental strand, 45084535 - 45084461
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaag 460  Q
    |||||| | ||| ||| |||| |||||||||| || |||||| ||||||||||| |||||| | |||||||||||    
T  45084535 gggggaccgtccgcatcgaggttagaacaaccgcacaagcaagagagacaccactctcttacccaaaaccttaag 45084461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 37556162 - 37556121
Alignment:
Q  468 gttcaacctttactatttttaagcgatgtgagacatataact 509  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  37556162 gttcaacctttactatttttatccgatgtgggacatataact 37556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 44043802 - 44043855
Alignment:
Q  417 cacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    ||||||| ||| |||||||||||||||||| | |||| |||||| |||||||||    
T  44043802 cacataaacaagagagacaccacactcttacccaaaatcttaagacaatgggtt 44043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 491 - 597
Alignment:
Q  363 tgttgggacactgaggggagctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggc 462  Q
    ||||||| ||||| ||| ||||||||||| | ||||||| |||| ||||| ||||||  |||||| | |||||||||||||||| | |||||||||||||    
T  491 tgttgggtcactg-gggaagctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaaccttaaggc 589  T
Q  463 aatgggtt 470  Q
    ||||||||    
T  590 aatgggtt 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 446
Target Start/End: Original strand, 141 - 206
Alignment:
Q  381 agctcgggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactctta 446  Q
    ||||||||||| | ||||||| |||| ||||||||||||  |||||| |||||||||||| |||||    
T  141 agctcgggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccacattctta 206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 5132 - 5061
Alignment:
Q  395 tccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatg 466  Q
    ||||||| |||| |||| ||||| ||||||| | |||||||||||||||||| | |||||| ||||||||||    
T  5132 tccacatcgaggctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatg 5061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 470
Target Start/End: Complemental strand, 5473 - 5432
Alignment:
Q  429 agagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  5473 agagacaccacactcttatccaaaatcttaaggcaatgggtt 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 47519 - 47435
Alignment:
Q  386 gggggatcatccacattgaggatagaacaaccacataagcaaaagagacaccacactcttatcaaaaaccttaaggcaatgggtt 470  Q
    |||||| | ||||||| |||| |||||||||| |  |||||| |||||||||||| | ||| | ||||| |||||||||||||||    
T  47519 gggggaccgtccacatcgaggttagaacaaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtt 47435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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