View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18198_low_17 (Length: 257)

Name: NF18198_low_17
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18198_low_17
NF18198_low_17
[»] chr2 (42 HSPs)
chr2 (101-228)||(24202142-24202269)
chr2 (101-224)||(36755618-36755741)
chr2 (101-205)||(29090431-29090534)
chr2 (124-223)||(20435778-20435877)
chr2 (104-163)||(38790074-38790133)
chr2 (101-176)||(42541199-42541274)
chr2 (102-176)||(5901808-5901882)
chr2 (125-182)||(8234791-8234849)
chr2 (101-210)||(1962836-1962944)
chr2 (133-194)||(32220996-32221057)
chr2 (125-176)||(3037621-3037673)
chr2 (104-176)||(18424131-18424203)
chr2 (124-204)||(33613604-33613684)
chr2 (125-176)||(34018069-34018121)
chr2 (146-182)||(41246427-41246463)
chr2 (101-168)||(5207050-5207117)
chr2 (102-176)||(29035020-29035092)
chr2 (101-168)||(37592198-37592265)
chr2 (101-171)||(42998685-42998754)
chr2 (146-176)||(1844864-1844894)
chr2 (101-167)||(5207145-5207211)
chr2 (124-210)||(12183734-12183820)
chr2 (101-199)||(18386790-18386887)
chr2 (146-176)||(36665474-36665504)
chr2 (133-175)||(37512356-37512398)
chr2 (124-170)||(37886224-37886270)
chr2 (128-176)||(17154693-17154742)
chr2 (124-173)||(20375640-20375689)
chr2 (101-158)||(34107556-34107613)
chr2 (124-169)||(43684329-43684374)
chr2 (136-176)||(580794-580834)
chr2 (124-168)||(3330200-3330244)
chr2 (146-178)||(5612999-5613031)
chr2 (125-172)||(11133124-11133172)
chr2 (125-199)||(20122474-20122550)
chr2 (136-172)||(32288424-32288460)
chr2 (150-194)||(32854561-32854605)
chr2 (101-181)||(33065233-33065313)
chr2 (101-181)||(41749986-41750065)
chr2 (124-168)||(42678323-42678367)
chr2 (101-169)||(43027206-43027274)
chr2 (125-172)||(44721703-44721751)
[»] chr7 (44 HSPs)
chr7 (101-227)||(29357794-29357919)
chr7 (108-221)||(44662446-44662559)
chr7 (101-177)||(6548688-6548764)
chr7 (101-220)||(5228071-5228189)
chr7 (101-208)||(46195930-46196037)
chr7 (101-197)||(13295351-13295447)
chr7 (101-220)||(26606085-26606204)
chr7 (124-220)||(24029985-24030081)
chr7 (101-176)||(28914853-28914928)
chr7 (101-176)||(48433686-48433761)
chr7 (102-176)||(15025200-15025274)
chr7 (146-199)||(25711152-25711206)
chr7 (101-181)||(3512634-3512714)
chr7 (101-173)||(23602321-23602393)
chr7 (102-198)||(29131992-29132088)
chr7 (136-199)||(36315985-36316049)
chr7 (104-176)||(37665788-37665860)
chr7 (124-176)||(40273865-40273917)
chr7 (101-172)||(4956068-4956139)
chr7 (124-219)||(47324482-47324576)
chr7 (101-176)||(29658250-29658323)
chr7 (124-221)||(9992609-9992704)
chr7 (125-176)||(21285352-21285404)
chr7 (124-220)||(25775612-25775708)
chr7 (124-168)||(38110182-38110226)
chr7 (124-220)||(38378219-38378315)
chr7 (125-199)||(47552233-47552309)
chr7 (101-220)||(14707293-14707411)
chr7 (101-172)||(31793516-31793587)
chr7 (101-168)||(48258160-48258227)
chr7 (154-228)||(46570000-46570074)
chr7 (123-220)||(8133793-8133890)
chr7 (101-169)||(27454062-27454131)
chr7 (124-176)||(3889799-3889851)
chr7 (124-176)||(10091456-10091508)
chr7 (124-176)||(12166126-12166178)
chr7 (125-176)||(14102505-14102557)
chr7 (125-176)||(14412522-14412574)
chr7 (124-172)||(20529944-20529992)
chr7 (148-176)||(27047738-27047766)
chr7 (101-169)||(32376490-32376558)
chr7 (125-176)||(33202553-33202605)
chr7 (124-172)||(33248801-33248849)
chr7 (146-194)||(46645738-46645786)
[»] chr8 (35 HSPs)
chr8 (102-220)||(10621352-10621470)
chr8 (101-205)||(30659968-30660072)
chr8 (101-176)||(17855693-17855768)
chr8 (104-215)||(19957300-19957411)
chr8 (102-228)||(31220336-31220460)
chr8 (124-206)||(43508447-43508529)
chr8 (102-220)||(10201262-10201380)
chr8 (101-171)||(41375536-41375606)
chr8 (125-199)||(4798540-4798616)
chr8 (101-176)||(4259903-4259978)
chr8 (101-202)||(39172189-39172289)
chr8 (146-215)||(43456673-43456742)
chr8 (124-176)||(1588811-1588863)
chr8 (146-198)||(7453377-7453429)
chr8 (146-194)||(13105120-13105168)
chr8 (125-176)||(15042364-15042416)
chr8 (125-172)||(33570428-33570476)
chr8 (124-176)||(41454826-41454878)
chr8 (101-172)||(38289211-38289282)
chr8 (125-182)||(14684215-14684273)
chr8 (124-198)||(35790840-35790914)
chr8 (125-182)||(44070367-44070425)
chr8 (101-158)||(8145835-8145892)
chr8 (124-176)||(1032614-1032666)
chr8 (101-201)||(1360111-1360210)
chr8 (124-176)||(2696577-2696629)
chr8 (124-176)||(2800063-2800115)
chr8 (125-199)||(17987448-17987524)
chr8 (146-178)||(25890397-25890429)
chr8 (101-172)||(31129350-31129419)
chr8 (125-199)||(34073238-34073314)
chr8 (146-194)||(34873115-34873163)
chr8 (135-200)||(35395658-35395724)
chr8 (146-194)||(36035172-36035220)
chr8 (146-182)||(42801642-42801678)
[»] chr4 (41 HSPs)
chr4 (101-207)||(2766734-2766840)
chr4 (104-220)||(38690666-38690782)
chr4 (112-189)||(2824623-2824700)
chr4 (101-206)||(45847902-45848007)
chr4 (101-198)||(56555571-56555667)
chr4 (101-176)||(11491195-11491270)
chr4 (101-176)||(37574316-37574391)
chr4 (101-172)||(48404113-48404184)
chr4 (101-220)||(50815707-50815826)
chr4 (101-172)||(16556499-16556570)
chr4 (101-172)||(44251303-44251374)
chr4 (124-175)||(46283167-46283218)
chr4 (104-198)||(29889757-29889851)
chr4 (102-172)||(37889583-37889653)
chr4 (101-171)||(40406936-40407006)
chr4 (101-198)||(45355694-45355790)
chr4 (101-198)||(45369435-45369531)
chr4 (125-199)||(20753124-20753200)
chr4 (124-172)||(43362167-43362215)
chr4 (125-176)||(47017945-47017997)
chr4 (124-198)||(9692983-9693058)
chr4 (124-198)||(20241392-20241467)
chr4 (101-176)||(26885376-26885451)
chr4 (103-158)||(35733436-35733491)
chr4 (101-172)||(51974795-51974866)
chr4 (123-176)||(548884-548938)
chr4 (101-198)||(24570232-24570329)
chr4 (130-211)||(34974711-34974791)
chr4 (125-176)||(3442887-3442939)
chr4 (125-176)||(3465627-3465679)
chr4 (124-176)||(14149837-14149889)
chr4 (125-169)||(21765409-21765453)
chr4 (124-220)||(22096390-22096486)
chr4 (124-176)||(28520730-28520782)
chr4 (124-172)||(29430545-29430593)
chr4 (125-168)||(32885740-32885784)
chr4 (125-176)||(36008319-36008371)
chr4 (146-194)||(36099176-36099224)
chr4 (124-176)||(48968209-48968261)
chr4 (101-153)||(49811384-49811436)
chr4 (125-176)||(53697979-53698031)
[»] chr3 (49 HSPs)
chr3 (101-223)||(166785-166907)
chr3 (101-223)||(27394505-27394626)
chr3 (124-222)||(9489475-9489573)
chr3 (101-158)||(54964517-54964574)
chr3 (101-215)||(1102672-1102786)
chr3 (101-210)||(54457163-54457272)
chr3 (101-176)||(29645803-29645878)
chr3 (104-170)||(45431677-45431743)
chr3 (101-171)||(47864685-47864755)
chr3 (101-170)||(49429510-49429579)
chr3 (101-176)||(33528181-33528256)
chr3 (101-168)||(43897654-43897721)
chr3 (124-227)||(50676866-50676969)
chr3 (101-171)||(1084011-1084080)
chr3 (101-171)||(31435477-31435547)
chr3 (104-210)||(37756392-37756498)
chr3 (146-199)||(54295226-54295280)
chr3 (101-220)||(55426114-55426229)
chr3 (101-158)||(8930953-8931010)
chr3 (101-198)||(32421370-32421467)
chr3 (102-171)||(48717462-48717531)
chr3 (125-176)||(24537871-24537923)
chr3 (124-176)||(29226370-29226422)
chr3 (125-176)||(46328923-46328975)
chr3 (125-199)||(49639048-49639124)
chr3 (101-176)||(50271773-50271848)
chr3 (101-171)||(27471553-27471623)
chr3 (101-155)||(38414948-38415002)
chr3 (101-171)||(39739323-39739393)
chr3 (124-198)||(50381736-50381810)
chr3 (136-177)||(53467991-53468032)
chr3 (125-199)||(335029-335105)
chr3 (125-176)||(2732707-2732759)
chr3 (124-176)||(9625027-9625079)
chr3 (124-176)||(10959177-10959229)
chr3 (124-176)||(11483657-11483709)
chr3 (125-199)||(13616073-13616149)
chr3 (124-176)||(27183680-27183732)
chr3 (146-194)||(27329925-27329973)
chr3 (125-199)||(31698553-31698629)
chr3 (125-199)||(32508793-32508869)
chr3 (125-176)||(33206801-33206853)
chr3 (125-172)||(36727462-36727510)
chr3 (125-172)||(43566795-43566843)
chr3 (146-194)||(44625218-44625266)
chr3 (125-199)||(45713500-45713576)
chr3 (146-194)||(51879124-51879172)
chr3 (101-176)||(52030165-52030238)
chr3 (146-182)||(53163635-53163671)
[»] chr1 (40 HSPs)
chr1 (101-215)||(19424051-19424165)
chr1 (101-198)||(25299881-25299978)
chr1 (101-210)||(29332296-29332403)
chr1 (101-176)||(46532471-46532546)
chr1 (101-171)||(2350351-2350421)
chr1 (104-223)||(17916704-17916819)
chr1 (101-210)||(8310664-8310772)
chr1 (101-169)||(21361656-21361724)
chr1 (101-221)||(35195587-35195707)
chr1 (101-220)||(15417793-15417912)
chr1 (101-176)||(24134600-24134675)
chr1 (101-227)||(43109214-43109340)
chr1 (101-198)||(41160865-41160962)
chr1 (101-198)||(42946443-42946540)
chr1 (101-229)||(34702289-34702417)
chr1 (151-226)||(34595866-34595941)
chr1 (124-215)||(50065015-50065106)
chr1 (124-206)||(14262720-14262802)
chr1 (101-192)||(32660858-32660948)
chr1 (101-181)||(7438660-7438740)
chr1 (101-181)||(10123029-10123109)
chr1 (125-199)||(15774311-15774387)
chr1 (101-197)||(25031473-25031569)
chr1 (146-177)||(19564146-19564177)
chr1 (101-176)||(40061487-40061562)
chr1 (101-192)||(32635168-32635258)
chr1 (125-177)||(32711143-32711196)
chr1 (125-169)||(34560337-34560382)
chr1 (124-172)||(3347702-3347750)
chr1 (136-176)||(4354116-4354156)
chr1 (125-172)||(11405504-11405552)
chr1 (124-176)||(17350105-17350157)
chr1 (146-194)||(18512568-18512616)
chr1 (125-176)||(23463985-23464037)
chr1 (140-192)||(32585376-32585428)
chr1 (125-172)||(37733803-37733851)
chr1 (125-168)||(39433410-39433454)
chr1 (125-168)||(39434670-39434714)
chr1 (146-178)||(44732678-44732710)
chr1 (136-176)||(50199487-50199527)
[»] chr6 (26 HSPs)
chr6 (102-215)||(7164700-7164812)
chr6 (101-176)||(6228236-6228311)
chr6 (101-176)||(18903343-18903418)
chr6 (101-210)||(5641666-5641774)
chr6 (101-220)||(17216958-17217077)
chr6 (101-176)||(20415538-20415613)
chr6 (124-176)||(4854305-4854357)
chr6 (125-176)||(6530203-6530255)
chr6 (136-199)||(9491746-9491810)
chr6 (146-198)||(31705924-31705976)
chr6 (101-176)||(11552915-11552990)
chr6 (101-171)||(5757847-5757917)
chr6 (133-171)||(29430311-29430349)
chr6 (146-223)||(30704961-30705037)
chr6 (125-176)||(3448396-3448448)
chr6 (146-178)||(3640559-3640591)
chr6 (124-172)||(3974489-3974537)
chr6 (101-176)||(6658521-6658594)
chr6 (125-176)||(12089141-12089193)
chr6 (125-199)||(18904682-18904758)
chr6 (136-176)||(19279493-19279533)
chr6 (125-176)||(22983624-22983676)
chr6 (125-176)||(23804732-23804784)
chr6 (125-176)||(25020527-25020579)
chr6 (146-194)||(27667189-27667237)
chr6 (124-215)||(32470689-32470781)
[»] scaffold0001 (1 HSPs)
scaffold0001 (101-176)||(419756-419831)
[»] chr5 (28 HSPs)
chr5 (101-167)||(15680877-15680943)
chr5 (101-176)||(31250191-31250266)
chr5 (124-210)||(34729482-34729567)
chr5 (101-178)||(5039722-5039799)
chr5 (125-199)||(8015855-8015931)
chr5 (124-176)||(38503256-38503308)
chr5 (124-176)||(43227910-43227962)
chr5 (124-227)||(20191435-20191537)
chr5 (125-227)||(35168632-35168734)
chr5 (125-178)||(38618680-38618734)
chr5 (146-178)||(20145557-20145589)
chr5 (125-199)||(29096307-29096383)
chr5 (101-172)||(17077409-17077480)
chr5 (123-177)||(26302491-26302546)
chr5 (146-176)||(6447501-6447531)
chr5 (146-176)||(6614059-6614089)
chr5 (102-172)||(9628165-9628235)
chr5 (124-176)||(1463915-1463967)
chr5 (103-143)||(12256474-12256514)
chr5 (146-182)||(12891598-12891634)
chr5 (146-194)||(17891852-17891900)
chr5 (125-176)||(18478047-18478099)
chr5 (125-176)||(19059003-19059055)
chr5 (146-194)||(23937926-23937974)
chr5 (151-223)||(28604410-28604481)
chr5 (125-176)||(32158413-32158465)
chr5 (125-176)||(33729822-33729874)
chr5 (101-177)||(42208959-42209035)
[»] scaffold0054 (1 HSPs)
scaffold0054 (104-215)||(22464-22575)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 24202269 - 24202142
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||  |||||||||||||| |    
T  24202269 gtcaagcagcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatccct 24202170  T
Q  201 tatcaagtgaactaaactcacggagact 228  Q
    || ||||||| |||| ||||||| ||||    
T  24202169 taccaagtgagctaagctcacggggact 24202142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 36755741 - 36755618
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||| | | | ||| ||||||||||||||||||||| ||||||||| ||||| ||||||| ||| || || |||||| |||||||| |    
T  36755741 gtcaagtagcctagcgaccggagaaagtcaccttaaaggtgaaatagttgggtgtccggggttcaaaccccgacccctatatatataatccattatccct 36755642  T
Q  201 tatcaagtgaactaaactcacgga 224  Q
    || |||||||  ||| ||||||||    
T  36755641 taccaagtgagttaagctcacgga 36755618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 29090534 - 29090431
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||| | ||||||||||||||| ||||  |||| |||||||| ||||||||| ||||||| |  || || |||||||||||| |    
T  29090534 gtcaagtagcctagcggctggagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaactccggcccctgtatata-aatgcattatccct 29090436  T
Q  201 tatca 205  Q
    |||||    
T  29090435 tatca 29090431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 20435877 - 20435778
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgg 223  Q
    ||||||||||||||| ||||  |||||| ||||||||||||||||||||| |||| |||  |  ||||| ||||| ||| ||||||| |||| |||||||    
T  20435877 aaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccgggccttgcataaaatatgcaatatcccttaccaagtgagctaagctcacgg 20435778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 38790074 - 38790133
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggtt 163  Q
    |||||| |||||||| | | ||||||| ||||||||||||||||||||||||||||||||    
T  38790074 aagtagtctagcggccggagaaattcatcttaaaggtgaaatagtggggtgtccgaggtt 38790133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 42541274 - 42541199
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||  | |||||||||||||||||||   ||||||||||| | |||||||||||| ||||    
T  42541274 gtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagccc 42541199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 5901808 - 5901882
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||| |||| || ||||||||||| ||| ||||  ||||||||||||| |||| | ||||||||||    
T  5901808 tcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggggtttgtaccccggccc 5901882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 8234791 - 8234849
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||||| |||||    
T  8234791 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacat 8234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 1962944 - 1962836
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||| || | | |||||||||||||| ||||  |||||||||||||  ||||||||| || ||| | |||  |  |||||||||||||    
T  1962944 gtcaagtagcctagcgact-agagaattcaccttaaagatgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctt 1962846  T
Q  201 tatcaagtga 210  Q
    || |||||||    
T  1962845 taccaagtga 1962836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 32221057 - 32220996
Alignment:
Q  133 ttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||| ||| || ||||||||||||||||||||||||||||||| | ||| || ||||||||    
T  32221057 ttaaatgtggaaaagtggggtgtccgaggttcgaaccccggcccctgcatataaaatgcatt 32220996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 3037621 - 3037673
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  3037621 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 3037673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 18424131 - 18424203
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||  | ||||||||||||||| ||||  |||||| ||||||  ||||||||||||||||    
T  18424131 aagtagcctagtggctagagaaattcaccttaaagatgaataagtgggatgtccggagttcgaaccccggccc 18424203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 33613604 - 33613684
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatc 204  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||| ||| ||||  ||| ||  ||||||||||| |||||    
T  33613604 aaattcaacttaaaggtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatcccttatc 33613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 34018069 - 34018121
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  34018069 aattcaccttataaggtgaataagtggggtgtccgaggttcgaaccccagccc 34018121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 41246463 - 41246427
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41246463 agtggggtgtccggggttcgaaccccggcccttacat 41246427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 5207117 - 5207050
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    |||||||||||||||| ||  |||||||||  ||||| || ||  |||||||||||||||||||||||    
T  5207117 gtcaagtagcctagcgactagaaaaattcattttaaaagtaaataagtggggtgtccgaggttcgaac 5207050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 29035092 - 29035020
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||| ||||  | |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  29035092 tcaagtagcctagtggct--agaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 29035020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 37592198 - 37592265
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||| |||||||||  | ||||||||||||||||| ||  ||||||||||| | |||||||||    
T  37592198 gtcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggtgtctggggttcgaac 37592265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 42998754 - 42998685
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaata-gtggggtgtccgaggttcgaacccc 171  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||| ||||| ||| |||||||||||||||    
T  42998754 gtcaagtagcctagcggctagagaaattcaccttaaaggt-aaatatgtgggctgt-cgaggttcgaacccc 42998685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Complemental strand, 1844894 - 1844864
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||||||||||||||    
T  1844894 agtggggtgtccgaggttcgaaccccggccc 1844864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 5207211 - 5207145
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaa 167  Q
    ||||||||| |||| |||| || ||||||| ||||||||||||  ||||||||||| | ||||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgtctggggttcgaa 5207145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 12183734 - 12183820
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtga 210  Q
    ||||||||||||||||| |||||||||| |||| |  ||||||| |||| ||| | |||  |||||||||||| | ||| |||||||    
T  12183734 aaattcaccttaaaggtaaaatagtgggatgtctggagttcgaatcccgacccctgcatacataatgcattattccttaccaagtga 12183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 18386790 - 18386887
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcc 198  Q
    |||||||||||||||||||   | |||||| |||| ||||||||  |||||||||||||  ||||||||||| |||| ||||| | |||||||||| |||    
T  18386790 gtcaagtagcctagcggct---agaattcatcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcattgtcc 18386886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Complemental strand, 36665504 - 36665474
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||||||||||||||    
T  36665504 agtggggtgtccgaggttcgaaccccggccc 36665474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 37512356 - 37512398
Alignment:
Q  133 ttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcc 175  Q
    ||||| |||||  ||||||||||||||||||||||||||||||    
T  37512356 ttaaacgtgaagaagtggggtgtccgaggttcgaaccccggcc 37512398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 37886224 - 37886270
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccc 170  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||    
T  37886224 aaattcaccttaaaggtgaataagtggggtgtccagggttcgaaccc 37886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 17154742 - 17154693
Alignment:
Q  128 tcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  17154742 tcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 17154693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 20375689 - 20375640
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccgg 173  Q
    ||||||||||||||| ||||  ||||| ||||| ||||||||||||||||    
T  20375689 aaattcaccttaaagatgaataagtggcgtgtctgaggttcgaaccccgg 20375640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 34107613 - 34107556
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccg 158  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  |||||||||||||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccg 34107556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 43684374 - 43684329
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    ||||||||||||||||||||  |||||||||| || ||||||||||    
T  43684374 aaattcaccttaaaggtgaataagtggggtgttcggggttcgaacc 43684329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 580794 - 580834
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||  ||||||||||||| |||||||||||||||||    
T  580794 aaggtgaataagtggggtgtccggggttcgaaccccggccc 580834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 3330200 - 3330244
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||    
T  3330200 aaattcaccttaaagatgaataagtggggtgtccggggttcgaac 3330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 5613031 - 5612999
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||||||||||| |||||||||||||||||||    
T  5613031 agtggggtgtccggggttcgaaccccggccctt 5612999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 11133172 - 11133124
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  11133172 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 11133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 20122474 - 20122550
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||| ||||  ||||| ||||||| ||||||||||||||||| ||||| | |||||||||| ||||    
T  20122474 aattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcct 20122550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 32288460 - 32288424
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||  |||||||||||||||||||||||||||    
T  32288460 aaggtgaataagtggggtgtccgaggttcgaaccccg 32288424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 32854605 - 32854561
Alignment:
Q  150 gggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||| ||||||||||||||||||| ||| || ||||||||    
T  32854605 gggtgtccggggttcgaaccccggcccttgcatataaaatgcatt 32854561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 33065233 - 33065313
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttaca 181  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||| |||||| ||  |||||||||||| ||| ||||    
T  33065233 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctaca 33065313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 41750065 - 41749986
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttaca 181  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||| ||||||||| ||||| ||||||| ||| ||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcaaaccccgacccctaca 41749986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 42678323 - 42678367
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||    
T  42678323 aaattcaccttaaagatgaataagtggggtgtccggggttcgaac 42678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 43027274 - 43027206
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    ||||||||| |||| ||||  | ||||||||||||||||||||  | ||||||||| | ||||||||||    
T  43027274 gtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacc 43027206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 44721703 - 44721751
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  | |||||||||||||||||||||||||    
T  44721703 aattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccg 44721751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 29357919 - 29357794
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||  ||||||||| ||||||| | ||| ||||||||||||||| |    
T  29357919 gtcaattagcctagcggccgaagaaattcaccttaaaggtgaaatagtggagtgtccagggttcgaactccggccc-tgcatatataatgcattatccct 29357821  T
Q  201 tatcaagtgaactaaactcacggagac 227  Q
    |||||||||| |||| |||||||||||    
T  29357820 tatcaagtgagctaagctcacggagac 29357794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 44662446 - 44662559
Alignment:
Q  108 agcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaag 207  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||  |||||||||||||| ||| | ||    
T  44662446 agcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttacctag 44662545  T
Q  208 tgaactaaactcac 221  Q
    ||| |||| |||||    
T  44662546 tgagctaagctcac 44662559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 6548688 - 6548764
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccct 177  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  6548688 gtcaagtagcctagcggccggagaaattcaccttaaaggtgaaatagtggggtgtccggagttcgaaccccggccct 6548764  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 5228189 - 5228071
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||  | ||||||||||||||| | |||  | ||||||||||||||    
T  5228189 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccaggattcgaaccccggcccctgcat-aaaaatgcattatcctt 5228091  T
Q  201 tatcaagtgaactaaactca 220  Q
    |||||||||| |||| ||||    
T  5228090 tatcaagtgagctaagctca 5228071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 208
Target Start/End: Complemental strand, 46196037 - 46195930
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||| || |||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| | |||  ||||| |||||||| |    
T  46196037 gtcaagcagactagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcaaaccccgacccctgcatacataatacattatccct 46195938  T
Q  201 tatcaagt 208  Q
    ||||||||    
T  46195937 tatcaagt 46195930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 13295351 - 13295447
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatc 197  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| || | | |||||||||||||||||| ||| |||||  ||||| |||||||    
T  13295351 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaaataatgagatatccgaggttcgaaccccgacccctacatacataatacattatc 13295447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 26606085 - 26606204
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||||| |||||||  | ||||||||||||||||||||  ||||| ||||||  ||||| ||||||||||| ||||| |    |||||||| | |    
T  26606085 gtcaagtagccaagcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccctacatatgatttgcattattcct 26606184  T
Q  201 tatcaagtgaactaaactca 220  Q
    ||||||||||||||| ||||    
T  26606185 tatcaagtgaactaagctca 26606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 24030081 - 24029985
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactca 220  Q
    ||||||||||||||| ||||  | ||||||||| | ||||||||||||||||| ||||  |||  |||||||||| ||||||| ||| |||||||||    
T  24030081 aaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaatgagctaaactca 24029985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 28914853 - 28914928
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||| || |||||  ||||||||||||| |||||||||||||||||    
T  28914853 gtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccc 28914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 48433686 - 48433761
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||| ||||||||||||    
T  48433686 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggccc 48433761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 15025274 - 15025200
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||| |  | ||||||||||||||||||||  |||||||||| || |||| ||||||||||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggccc 15025200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 25711152 - 25711206
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  25711152 agtggggtgtccgaggttcgaaccccggcccctacatataataatgcattatcct 25711206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 3512634 - 3512714
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttaca 181  Q
    ||||||||||| |||||| | | |  ||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||    
T  3512634 gtcaagtagcccagcggccggagatgttcaccttaaaagtgaaatagtagggtgtctggggttcgaaccccggcccctaca 3512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 23602393 - 23602321
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccgg 173  Q
    ||||||||| |||| |||| || ||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  23602393 gtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccgg 23602321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 29131992 - 29132088
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||| |||| ||||| ||| | ||||||||||||||| | ||||||||||||||| | ||||| ||||||| | ||| |||  ||||||||||||||    
T  29131992 tcaaatagcttagcgactggagaaattcaccttaaagataaaatagtggggtgtctggggttcaaaccccgactcttgcatacataatgcattatcc 29132088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 36315985 - 36316049
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||  ||||||||||||||||||||||||||||||| | ||| | |||||||||||||||    
T  36315985 aaggtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattatcct 36316049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 37665860 - 37665788
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||| |||| |||| || |||||||||||||||| |||  ||||||||||||| |||| ||||||||||||    
T  37665860 aagtagtctagtggctaaagaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggccc 37665788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 40273917 - 40273865
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  40273917 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 40273865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 4956068 - 4956139
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||  |||||||||||||    
T  4956068 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccg 4956139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 47324482 - 47324576
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactc 219  Q
    |||||||||||||||||||   ||||||||||| |||||||||||| | || | | ||| ||| ||||||||||||||| ||| ||| ||||||||    
T  47324482 aaattcaccttaaaggtgattaagtggggtgtcagaggttcgaacctcagctcatgcatatattatgcattatcctttaccaa-tgatctaaactc 47324576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 29658250 - 29658323
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||   | ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  29658250 gtcaagtagcctagtggct---agaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 29658323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 9992704 - 9992609
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcac 221  Q
    |||||||||| |||||||||||| |||||||| || |||||||||||||  |  |||||  |||||||||||||| ||||||| ||| |||| |||||    
T  9992704 aaattcacct-aaaggtgaaata-tggggtgttcggggttcgaaccccgatctctacatacataatgcattatcccttatcaaatgagctaagctcac 9992609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 21285352 - 21285404
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  21285352 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 21285404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 25775612 - 25775708
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactca 220  Q
    ||||||||||||||| ||||  ||||||||||  |  ||||||||| |||  ||| ||| ||| || |||||||||||| ||||||| |||||||||    
T  25775612 aaattcaccttaaagatgaataagtggggtgtttggagttcgaacctcggttcttgcatatattatacattatcctttaccaagtgagctaaactca 25775708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 38110182 - 38110226
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||    
T  38110182 aaattcatcttaaaggtgaaatagtggagtgttcgaggttcgaac 38110226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 38378315 - 38378219
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactca 220  Q
    ||||||||||||||  ||||  ||||||||||||| ||||| ||||||||||| | ||  |||  |||||||||| ||| ||| | |||||||||||    
T  38378315 aaattcaccttaaaaatgaataagtggggtgtccggggttcaaaccccggcccctgcacatattgtgcattatcccttaccaaataaactaaactca 38378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 47552309 - 47552233
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||| ||||||||| ||||||||||||||||||| ||| | |||||||||| ||||    
T  47552309 aattcaccttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgcatataataatgcattgtcct 47552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 14707411 - 14707293
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||| ||| |||||  | ||||||||  ||||||||||  ||||||||||||| ||||||||||||  ||| | ||| || |||||||||||| |    
T  14707411 gtcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata-aatgcattatccct 14707313  T
Q  201 tatcaagtgaactaaactca 220  Q
    || ||| ||| |||| ||||    
T  14707312 taccaaatgagctaagctca 14707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 31793587 - 31793516
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||| ||||| ||||  | |||| |||||||||| ||||  ||||||||||||| |||||||||||||    
T  31793587 gtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccg 31793516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 48258160 - 48258227
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    |||| ||||||||||||||  | |||||||| |||||||||||  | ||||||||||| |||||||||    
T  48258160 gtcaggtagcctagcggctagacaaattcactttaaaggtgaataaatggggtgtccggggttcgaac 48258227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 46570000 - 46570074
Alignment:
Q  154 gtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacggagact 228  Q
    ||||| ||||||||||||||||| | |||  |  ||||||||||| ||||||||||| |||| ||||||| ||||    
T  46570000 gtccggggttcgaaccccggcccctgcataaactatgcattatcccttatcaagtgagctaagctcacggggact 46570074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 8133793 - 8133890
Alignment:
Q  123 aaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactca 220  Q
    |||||||||||||||||  || || ||||||||| |  ||||||||  |||||| | |||  || ||||||||||| ||||||||||| |||| ||||    
T  8133793 aaaattcaccttaaaggcaaattaatggggtgtctggagttcgaacttcggcccctgcataaattatgcattatccattatcaagtgagctaagctca 8133890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 27454131 - 27454062
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcacctta-aaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    |||||||||||||| ||||  | |||||||||||  ||| ||||  ||||||||||||||||||||||||    
T  27454131 gtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacc 27454062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 3889799 - 3889851
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||| ||||  ||||||||||||| ||||||||||| |||||    
T  3889799 aaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccc 3889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 10091456 - 10091508
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||||||||  ||| |||||||   |||||||||||||||||    
T  10091456 aaattcaccttaaaggtgaataagttgggtgtctagggttcgaaccccggccc 10091508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 12166178 - 12166126
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  ||||||||||| | |||||||||||| ||||    
T  12166178 aaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagccc 12166126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 14102557 - 14102505
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| ||||| |||||||||||    
T  14102557 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggccc 14102505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 14412574 - 14412522
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| ||||| |||||||||||    
T  14412574 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggccc 14412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 20529992 - 20529944
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||||||||  ||||||||||||| || | ||||||||    
T  20529992 aaattcaccttaaaggtgaataagtggggtgtccggggcttgaaccccg 20529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 27047738 - 27047766
Alignment:
Q  148 tggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||||||||||||    
T  27047738 tggggtgtccgaggttcgaaccccggccc 27047766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 32376558 - 32376490
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    |||||||||  |||||||| || ||||||||||||||| ||||  | ||||||||||||| ||| ||||    
T  32376558 gtcaagtagtttagcggctaaagaaattcaccttaaagttgaataaatggggtgtccgagattcaaacc 32376490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 33202553 - 33202605
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||| ||||  ||||||||||||| |||||||||||||||||    
T  33202553 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggccc 33202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 33248801 - 33248849
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||| ||||  ||| ||||||||| |||||||||||||    
T  33248801 aaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccg 33248849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 46645786 - 46645738
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  46645786 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 46645738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 10621352 - 10621470
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatccttt 201  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| | ||||||||||| ||||| ||||| | ||| | |||  |||||||||||||| ||    
T  10621352 tcaagtagcctagcggcggaagaaattcacattaaaggtgaaaaaatggggtgtccggggttcaaaccctgacccctgcatacataatgcattatccctt 10621451  T
Q  202 atcaagtgaactaaactca 220  Q
    ||||||||| |||| ||||    
T  10621452 atcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 30660072 - 30659968
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||| |||||||| ||| | |||  ||||| |||||||| |    
T  30660072 gtcaaatagcctagcggttggaaaaatttaccttaaaggtgaaatagtggggtgtccggggtttgaaccccgacccctgcatacataatacattatccct 30659973  T
Q  201 tatca 205  Q
    |||||    
T  30659972 tatca 30659968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 17855768 - 17855693
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| ||||||||||  |||||||||| ||||| |||||  ||||||||||||| |||||||||||||||||    
T  17855768 gtcaagtaacctagcggctagaaaaattcactttaaatgtgaataagtggggtgtccggggttcgaaccccggccc 17855693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 19957300 - 19957411
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttat 203  Q
    |||||||||||| |||  | ||||||||||||||||||||  ||||||||||||| |||||||||| || ||| | ||| ||  ||||||||||| |||     
T  19957300 aagtagcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttac 19957399  T
Q  204 caagtgaactaa 215  Q
    ||||||| ||||    
T  19957400 caagtgagctaa 19957411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 31220460 - 31220336
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatccttt 201  Q
    |||| ||||||||||||  || |||||||||||||| |||||||||||| ||||||  | ||| |||||| |||  | ||| ||||||||||||||| ||    
T  31220460 tcaattagcctagcggccaaagaaattcaccttaaatgtgaaatagtggagtgtccaggattcaaaccccagcc--tgcatatataatgcattatccctt 31220363  T
Q  202 atcaagtgaactaaactcacggagact 228  Q
    | ||||||| |||| ||||||| ||||    
T  31220362 accaagtgagctaagctcacggggact 31220336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 43508447 - 43508529
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaa 206  Q
    ||||||||||| ||||||||  ||||||||||||| ||||| ||||||||||| ||||| ||| ||||||| ||| |||||||    
T  43508447 aaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtcccttatcaa 43508529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 10201380 - 10201262
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatccttt 201  Q
    ||||||||| || |||||  | |||||||| |||||||||||  | || |||||||| ||||||||||||| ||| ||||| ||| ||||||||||  ||    
T  10201380 tcaagtagcttaacggctagagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctctt 10201281  T
Q  202 atcaagtgaactaaactca 220  Q
    | ||| | |||||||||||    
T  10201280 accaactaaactaaactca 10201262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 41375606 - 41375536
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||||||||| |||| | |||||||| ||||||||||||||||| ||||||||  |||| ||||||    
T  41375606 gtcaagtagcctagcagctggagaaattcactttaaaggtgaaatagtgaggtgtccggagttcaaacccc 41375536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 4798540 - 4798616
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||    
T  4798540 aattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatcct 4798616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 4259978 - 4259903
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||| ||||| |||| ||||||||||||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggccc 4259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 39172189 - 39172289
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| |||| || |||||||| |||||||||||  | ||||||||||| | |||||||  |||||  |||||  | ||||||||||||||    
T  39172189 gtcaagtagcctaggggctaaagaaattcactttaaaggtgaataaatggggtgtccgggattcgaacttcggcctctacataca-aatgcattatcctt 39172287  T
Q  201 ta 202  Q
    ||    
T  39172288 ta 39172289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 43456673 - 43456742
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaa 215  Q
    ||||||||||||| ||||||||||||| ||||||||| |||  |||||||||| ||| ||| ||| ||||    
T  43456673 agtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgagctaa 43456742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 1588863 - 1588811
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  |||||||||||||||||||||||||||||||    
T  1588863 aaattcacttttaaagtgaataagtggggtgtccgaggttcgaaccccggccc 1588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 7453429 - 7453377
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||||||| ||||||||||||||||| ||||| || |||||| |||||    
T  7453429 agtggggtgtccggggttcgaaccccggcccctacatataaaatgcaatatcc 7453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 13105168 - 13105120
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| |||||||    
T  13105168 agtggggtgtctgaggttcgaaccccggcccttgcatatattatgcatt 13105120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 15042364 - 15042416
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  15042364 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 15042416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 33570428 - 33570476
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  33570428 aattcaccttataaggtgaataagtggggtgtccgaggttcgaaccccg 33570476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 41454826 - 41454878
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| |||||| ||||  ||||||||||||| |||||||||||||||||    
T  41454826 aaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggccc 41454878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 38289211 - 38289282
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||| ||| ||||  | ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccg 38289282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 14684215 - 14684273
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||| ||| ||||  |||||||||||||| |||||||||||||||| |||||    
T  14684215 aattcaccttataagatgaataagtggggtgtccgaagttcgaaccccggcccctacat 14684273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 35790840 - 35790914
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||| ||| ||||| |||||||||||| | ||  |||||||||||||||| | |||  ||||||||||||||    
T  35790840 aaattcaactttaaggtaaaatagtggggttttcggagttcgaaccccggcccctgcatacataatgcattatcc 35790914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 44070367 - 44070425
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||| ||||||||  ||| |||||||||||||||||||| |||||| |||||    
T  44070367 aattcaccttataaggtgaataagtagggtgtccgaggttcgaaccgcggcccctacat 44070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 8145892 - 8145835
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccg 158  Q
    |||||||||| |||||| |  | ||||||||||||||||||||  |||||||||||||    
T  8145892 gtcaagtagcgtagcggttagagaaattcaccttaaaggtgaataagtggggtgtccg 8145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 1032666 - 1032614
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  ||||||||||| | |||||||||||| ||||    
T  1032666 aaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagccc 1032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 1360111 - 1360210
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| || |  | |||||||| |||||  ||||  ||||||||||||| |||||||||||| |||| ||||  |||  ||||||||||||    
T  1360111 gtcaagtagcctagtggttagagaaattcactttaaaa-tgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctt 1360209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 2696629 - 2696577
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  2696629 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 2696577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 2800115 - 2800063
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  2800115 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 2800063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 17987448 - 17987524
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  | ||||||||||| ||||||||| ||||||| | ||| | |||||||||||||||    
T  17987448 aattcaccttataaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcattatcct 17987524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 25890397 - 25890429
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||||||||||| |||||||||||||||||||    
T  25890397 agtggggtgtccggggttcgaaccccggccctt 25890429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 31129419 - 31129350
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||| ||||||||| ||||  |||||||||| || || |||||  ||||||||||||| |||||||||||||    
T  31129419 gtcaggtagcctagtggct--aaaaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccg 31129350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 34073238 - 34073314
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||  | ||| ||||| | |||||||||||||||    
T  34073238 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcattatcct 34073314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 34873163 - 34873115
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||||||||||||||||| ||| | ||| || ||||||||    
T  34873163 agtggggtgtccgaggttcgaaccccgacccctgcatataaaatgcatt 34873115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 35395724 - 35395658
Alignment:
Q  135 aaaggtgaaatagtggggtgtccgaggttcgaacccc--ggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||| ||||| | ||||||||||||  |||||||  || |||||||||||||||||    
T  35395724 aaaggtgaaatagtggagtgtcgg-ggttcgaaccccccggcccttggatatataatgcattatcctt 35395658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 36035172 - 36035220
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||||||||||||||||| ||| | ||| || ||||||||    
T  36035172 agtggggtgtccgaggttcgaaccccgacccctgcatataaaatgcatt 36035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 42801642 - 42801678
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  42801642 agtggggtgtccgaggttcgaaccccgacccctacat 42801678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 2766734 - 2766840
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| |||| | | |||||||| |||||||| | |||  |||||||||||||| |    
T  2766734 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaaatagtgaggtgcctggggttcgaatcccggcccctgcatacataatgcattatccct 2766833  T
Q  201 tatcaag 207  Q
    || ||||    
T  2766834 taccaag 2766840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 38690782 - 38690666
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttat 203  Q
    ||||||||||||||||  | |||||||||||||||| |||  ||||||||||||| ||||||||||||| ||| | ||| ||  ||||||||||| |||     
T  38690782 aagtagcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttac 38690683  T
Q  204 caagtgaactaaactca 220  Q
    ||||||| |||| ||||    
T  38690682 caagtgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 2824700 - 2824623
Alignment:
Q  112 tagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataat 189  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||  |||||||| ||| ||| ||||| ||||||    
T  2824700 tagcggctggagaaattcaccttaaaggtgaaatagtgggatgtccggagttcgaactccgacccctacatatataat 2824623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 45847902 - 45848007
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||| ||||||| |||| || ||||||||||||||| ||||  ||||||||||||| |||||||||||||  || | ||  ||| ||||||||||| |    
T  45847902 gtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccct 45848001  T
Q  201 tatcaa 206  Q
    ||||||    
T  45848002 tatcaa 45848007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 56555667 - 56555571
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||| |||||||| |||||  | ||||||||||||||||||||  |||||||||| |||||||||||||||| ||| | ||| || ||||||||||||    
T  56555667 gtcaggtagcctaacggctagagaaattcaccttaaaggtgaataagtggggtgttcgaggttcgaaccccgacccctgcatata-aatgcattatcc 56555571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 11491195 - 11491270
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| ||||||||| |||||||    
T  11491195 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccggccc 11491270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 37574391 - 37574316
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||||||||  ||||||||| ||| |||| ||||||||||||    
T  37574391 gtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtttgaaccccggccc 37574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 48404113 - 48404184
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||||| |||| || ||||||||||||||| ||||  |||| |||||||| |||||||||||||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccg 48404184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 50815826 - 50815707
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| ||||  | ||||||||||| ||| ||||   |||||||||||| ||||||||||||||||| | ||   ||  ||||||||||||    
T  50815826 gtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaaccccggcccctgcacaaattgtgcattatcctt 50815727  T
Q  201 tatcaagtgaactaaactca 220  Q
    |||||| ||| |||| ||||    
T  50815726 tatcaaatgagctaagctca 50815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 16556570 - 16556499
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  |||||||||| || |||||||||||||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccg 16556499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 44251303 - 44251374
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||  | ||||||||||| | |||||||||||    
T  44251303 gtcaaatagcctagcggctagaaaaattcaccttaaagatgaataaatggggtgtccgggattcgaaccccg 44251374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 46283218 - 46283167
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcc 175  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||||    
T  46283218 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcc 46283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 29889757 - 29889851
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||||||||||  | |||||||||||||| |||||  | |||||  ||||| |||||||||||||||| | ||| ||  |||||||||||    
T  29889757 aagtagcctagcggctagagaaattcaccttaaatgtgaataaatggggcatccgaagttcgaaccccggcccctgcatataatatgcattatcc 29889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 37889583 - 37889653
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||| ||||  | |||||||||||||| |||||  |||| |||||||| |||||||||||||    
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggggttcgaaccccg 37889653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 40406936 - 40407006
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    |||||| ||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| ||||||||||||    
T  40406936 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccc 40407006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 45355694 - 45355790
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||| ||||||||| ||||||||||||| ||| ||||  |||  ||||||||||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatcc 45355790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 45369435 - 45369531
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||| ||||||||| ||||||||||||| ||| ||||  |||  ||||||||||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatcc 45369531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 20753124 - 20753200
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  |||| |||||||| ||||||||||||||||| ||||| | |||||||||| ||||    
T  20753124 aattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcattttcct 20753200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 43362167 - 43362215
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||||||    
T  43362167 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccg 43362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 47017945 - 47017997
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  47017945 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 47017997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 9693058 - 9692983
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcc 198  Q
    |||||||| || || |||||  ||||||||||||| ||||||||||||||||| | ||| | ||||||||||||||    
T  9693058 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatcc 9692983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 20241467 - 20241392
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc-ggcccttacatctataatgcattatcc 198  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| |||| | ||||||||| |||  ||||||||||    
T  20241467 aaattcacctttaagatgaaaaagtggggtgtccgaagttcgacccccagtcccttacatatattgtgcattatcc 20241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 26885376 - 26885451
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | |||| |||||||||| | ||  ||||| ||||||| |||||||||||||||||    
T  26885376 gtcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccc 26885451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 35733491 - 35733436
Alignment:
Q  103 caagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccg 158  Q
    ||||||| ||||||||| || ||| ||||||||||||||||  |||||||||||||    
T  35733491 caagtagtctagcggctaaagaaactcaccttaaaggtgaataagtggggtgtccg 35733436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 51974866 - 51974795
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||||| ||||  | ||||||||||||||| | ||  |||||| ||||||||||||||| ||||    
T  51974866 gtcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccg 51974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 548884 - 548938
Alignment:
Q  123 aaaattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||    
T  548884 aaaattcaccttataaggtgaataagtggggtgtctgagtttcgaaccccggccc 548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 24570329 - 24570232
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||| | || ||| ||| ||||||||||||||| ||||  ||| |||||| || ||||||||||||  ||| ||||| |||  ||||||||||    
T  24570329 gtcaagtagtccagtggccgaagaaattcaccttaaagttgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcc 24570232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 34974791 - 34974711
Alignment:
Q  130 accttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaa 211  Q
    |||||||||| |||  ||||||||||||| |||||||||||| |||| |||||  | |||||||||||| ||| ||| ||||    
T  34974791 accttaaaggagaataagtggggtgtccggggttcgaaccccagcccctacataca-aatgcattatcccttaccaaatgaa 34974711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 3442939 - 3442887
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||| | |||||||||||||||||    
T  3442939 aattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccc 3442887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 3465679 - 3465627
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||| |||||||    
T  3465679 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccggccc 3465627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 14149889 - 14149837
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  14149889 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 14149837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 21765409 - 21765453
Alignment:
Q  125 aattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    |||| |||| |||||||||  ||||||||||||||||||||||||    
T  21765409 aatttacctcaaaggtgaataagtggggtgtccgaggttcgaacc 21765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 22096390 - 22096486
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactca 220  Q
    ||||||||||||||  ||||  |||||||||||||  ||||||||| |||||| | ||  |||  |||||||||| ||| ||| |||| ||||||||    
T  22096390 aaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaaatgaattaaactca 22096486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 28520730 - 28520782
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  28520730 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 28520782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 29430593 - 29430545
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||| ||||  ||| ||||||||| |||||||||||||    
T  29430593 aaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccg 29430545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 32885784 - 32885740
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  32885784 aattcaccttataaggtgaataagtggggtgtccgaggttcgaac 32885740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 36008371 - 36008319
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  |||||||||| || |||||||||||||||||    
T  36008371 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggccc 36008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 36099176 - 36099224
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  36099176 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 36099224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 48968209 - 48968261
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  48968209 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 48968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 49811384 - 49811436
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggt 153  Q
    |||||||||||||||||||  | ||||||| ||||||||||||  ||||||||    
T  49811384 gtcaagtagcctagcggctagagaaattcatcttaaaggtgaataagtggggt 49811436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 53697979 - 53698031
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||| ||  ||||||||||||| |||||||||||||||||    
T  53697979 aattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggccc 53698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 166907 - 166785
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||||||||||||| || |||||||| |||||||||||  |||| |||||| | ||||||||||||||||| | |||  || ||||||||||| |    
T  166907 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccct 166808  T
Q  201 tatcaagtgaactaaactcacgg 223  Q
    || ||||||| |||| |||||||    
T  166807 taccaagtgagctaagctcacgg 166785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 27394626 - 27394505
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||| ||||| |||||| |||| | ||| || |||||||||||| |    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatata-aatgcattatccct 27394528  T
Q  201 tatcaagtgaactaaactcacgg 223  Q
    || ||||||| || | |||||||    
T  27394527 taccaagtgagcttagctcacgg 27394505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 9489573 - 9489475
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacg 222  Q
    ||||||| ||||||||||||||||| |||| |||  ||||||||||||||||| | |||  |||||||||||||| ||| |||| || |||||||||||    
T  9489573 aaattcatcttaaaggtgaaatagtagggtatccagggttcgaaccccggcccctgcatacataatgcattatcccttaccaagcgagctaaactcacg 9489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 54964517 - 54964574
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccg 158  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  54964517 gtcaagtagcctagcggctggagaaatacaccttaaaggtgaaatagtggggtgtccg 54964574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 1102672 - 1102786
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||  ||||||||| ||| ||| | |||  || ||||||||||| |    
T  1102672 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatccct 1102771  T
Q  201 tatcaagtgaactaa 215  Q
    || || |||| ||||    
T  1102772 taccaggtgagctaa 1102786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 54457272 - 54457163
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  | ||||||||||| ||||  |||||| || | |||||  || ||||||||||  |    
T  54457272 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggtgtccggggtttaaaccccagctcctacataaattatgcattatctct 54457173  T
Q  201 tatcaagtga 210  Q
    ||||||||||    
T  54457172 tatcaagtga 54457163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 29645803 - 29645878
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||| |||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 29645878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 45431743 - 45431677
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccc 170  Q
    ||||||||||||||||    ||||||||||||||||||||  ||||||||||||| |||||||||||    
T  45431743 aagtagcctagcggctagggaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccc 45431677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 47864755 - 47864685
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| ||||||||||||    
T  47864755 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccc 47864685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 49429579 - 49429510
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccc 170  Q
    ||||| |||| ||||||||  | ||||||||||||||||||||  ||||||||||||| |||||||||||    
T  49429579 gtcaaatagcttagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccc 49429510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 33528181 - 33528256
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||| | |||||||||||| ||||    
T  33528181 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagccc 33528256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 43897721 - 43897654
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||||| ||| |  | ||||||||||||||||||||  ||||||||||| |||||||||||    
T  43897721 gtcaagtagcctaacggttagagaaattcaccttaaaggtgaataagtggggtgtctgaggttcgaac 43897654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 50676866 - 50676969
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgg 223  Q
    ||||||||||||||||||||  |||||||||| || ||||||||||||  ||| ||||| ||  ||| ||| ||| ||| |||||||  |||||||| ||    
T  50676866 aaattcaccttaaaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtcccttaccaagtgagttaaactcatgg 50676965  T
Q  224 agac 227  Q
    ||||    
T  50676966 agac 50676969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 1084011 - 1084080
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    |||||||||||||| ||||||  |||||||| |||||| || ||||||| |||||||| ||||||||||||    
T  1084011 gtcaagtagcctagtggctgacgaaattcactttaaagatg-aatagtgaggtgtccggggttcgaacccc 1084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 31435477 - 31435547
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||| |||| ||||  | ||||||||||||||| ||||  |||||| |||||||||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaacccc 31435547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 37756392 - 37756498
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttat 203  Q
    |||||||||||||||   | ||| |||| |||||||||||  ||||||||||  | |||||||||||| |||| | |||  || ||||||||||| ||||    
T  37756392 aagtagcctagcggcgagagaaactcacgttaaaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatcccttat 37756491  T
Q  204 caagtga 210  Q
    |||||||    
T  37756492 caagtga 37756498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 54295280 - 54295226
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatcta-taatgcattatcct 199  Q
    ||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  54295280 agtggagtgtccgaggttcgaaccccggcccctacatatattaatgcattatcct 54295226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 55426229 - 55426114
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| ||||  | ||||||||||||||| |||    |||||||||||| |||||||||| |||||| | ||  |||  ||||||||||||    
T  55426229 gtcaagtagcctagtggctagagaaattcaccttaaagatga----gtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatcctt 55426134  T
Q  201 tatcaagtgaactaaactca 220  Q
    || ||| ||| |||| ||||    
T  55426133 taccaaatgagctaagctca 55426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 8930953 - 8931010
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccg 158  Q
    |||||||||||||||||||  | |||||||| |||||||||||  |||||||||||||    
T  8930953 gtcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggtgtccg 8931010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 32421467 - 32421370
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||||||||  ||| ||||  ||||||||| ||||||| ||||  ||||||| || |||||||||||||||| ||| | ||| ||| |||||||||||    
T  32421467 gtcaagtagtttagtggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatcc 32421370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 48717531 - 48717462
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||  ||||||||| | ||||||||||||||| ||||| ||||||||||  | ||||||||||||    
T  48717531 tcaagtagtttagcggctggagaaattcaccttaaagatgaaaaagtggggtgtttggggttcgaacccc 48717462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 24537923 - 24537871
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  24537923 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 24537871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 29226422 - 29226370
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  |||||||||| || |||||||||||||||||    
T  29226422 aaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccggccc 29226370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 46328923 - 46328975
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  46328923 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccc 46328975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 49639124 - 49639048
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  |||||||||| || ||||||||||||||||| ||||| | |||||||||| ||||    
T  49639124 aattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcct 49639048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 50271848 - 50271773
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||| ||||||| |  | ||||||||||||||||||||  |||||| ||| || |||||||||| ||||||    
T  50271848 gtcaagtagtctagcggttagagaaattcaccttaaaggtgaataagtgggatgtacggggttcgaaccacggccc 50271773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 27471623 - 27471553
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||| |||| ||||  | ||||| ||||||||| ||||  ||||||||||||| ||||||||||||    
T  27471623 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaacccc 27471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 38415002 - 38414948
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgt 155  Q
    ||||||||||||||||||   | ||||||||||||||||||||  ||||||||||    
T  38415002 gtcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggtgt 38414948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 39739393 - 39739323
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||| |||| ||||  | ||||||||||||||| ||||  |||| |||||||| ||||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaacccc 39739323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 50381810 - 50381736
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||||||||| ||||  ||||||||||||| | ||||||||||| ||| | ||| |||  ||||||||||    
T  50381810 aaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatcc 50381736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 53468032 - 53467991
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggccct 177  Q
    ||||||||  ||||||||||||||||||||||||||| ||||    
T  53468032 aaggtgaataagtggggtgtccgaggttcgaaccccgcccct 53467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 335029 - 335105
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||  ||||||||| |||| |||||||| | |||||||||| ||||    
T  335029 aattcaccttataaggtgaataagtggggtgtccagggttcgaactccggtccttacatataataatgcattgtcct 335105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 2732759 - 2732707
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||| ||||    
T  2732759 aattcaccttataaggtgaataagtggggtgtccggggttcgaacccctgccc 2732707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 9625079 - 9625027
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  9625079 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 9625027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 10959229 - 10959177
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  10959229 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 10959177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 11483709 - 11483657
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  |||||||||||||  |||||||||| |||||    
T  11483709 aaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggccc 11483657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 13616073 - 13616149
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||| ||||  ||||||||||||||||||||||| ||| ||| ||||| | |||||||||| ||||    
T  13616073 aattcaccttataagatgaataagtggggtgtccgaggttcgaactccgacccctacatataataatgcattgtcct 13616149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 27183680 - 27183732
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  27183680 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 27183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 27329925 - 27329973
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  27329925 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 27329973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 31698629 - 31698553
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||| ||||  |||||||||| |||||||||||||||||| | | ||| | |||||||||||||||    
T  31698629 aattcaccttataagatgaataagtggggtgttcgaggttcgaaccccggctcctgcatataataatgcattatcct 31698553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 32508793 - 32508869
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  |||||||||| || ||||||||||||| ||| | ||| | |||||||||||||||    
T  32508793 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattatcct 32508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 33206853 - 33206801
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||| ||||    
T  33206853 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagccc 33206801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 36727462 - 36727510
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  36727462 aattcaccttataagatgaataagtggggtgtccgaggttcgaaccccg 36727510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 43566795 - 43566843
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  ||||||||||| |||||||||||||||    
T  43566795 aattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccg 43566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 44625218 - 44625266
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  44625218 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 44625266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 45713576 - 45713500
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  |||||||||||||  |||||||| ||||||| ||||| | |||||||||| ||||    
T  45713576 aattcaccttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcattgtcct 45713500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 51879172 - 51879124
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  51879172 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 51879124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 52030238 - 52030165
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||| ||||||||| ||||  |||||||||| || || |||||  ||| ||||||||| |||||||||||||||||    
T  52030238 gtcaggtagcctagtggct--aaaaattcacttttaaagtgaataagtagggtgtccggggttcgaaccccggccc 52030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 53163671 - 53163635
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  53163671 agtggggtgtccggggttcgaaccccggcccctacat 53163635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 19424165 - 19424051
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||| ||||||||||||| ||| | ||| ||  ||||||||||| |    
T  19424165 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 19424066  T
Q  201 tatcaagtgaactaa 215  Q
    |||||| ||| ||||    
T  19424065 tatcaaatgagctaa 19424051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 25299978 - 25299881
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    |||||||||||||||||||| | |||||||||||  |||||||||||||||||||||  ||| ||||||| | ||| | ||| |||||||||||||||    
T  25299978 gtcaagtagcctagcggctggagaaattcaccttcgaggtgaaatagtggggtgtccagggtacgaaccctgacccctgcatatataatgcattatcc 25299881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 29332403 - 29332296
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||| | ||| ||| || |||||||| |    
T  29332403 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccggcccatgcat-tat-atacattatccct 29332306  T
Q  201 tatcaagtga 210  Q
    ||||||||||    
T  29332305 tatcaagtga 29332296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 46532471 - 46532546
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||| |||||| |  | ||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  46532471 gtcaagtagcttagcggttagagaaattcaccttaaaggtgaaatagtggggtgtctgaagttcgaatcccggccc 46532546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 2350351 - 2350421
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    ||||||||||||||||||| || |||||||| |||||||||||  |||||||||| || ||||||||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggtgttcggggttcgaacccc 2350421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 17916819 - 17916704
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttat 203  Q
    |||||||||||||| || | |||||||| |||||||||||||||| ||||||     |||||||||||| ||| | ||| |||||| ||||||||||||     
T  17916819 aagtagcctagcggttggagaaattcacattaaaggtgaaatagtagggtgt----agttcgaaccccgacccctgcatatataatacattatcctttac 17916724  T
Q  204 caagtgaactaaactcacgg 223  Q
    ||| ||| |||| |||||||    
T  17916723 caaatgagctaagctcacgg 17916704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 8310772 - 8310664
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||||||||||| || | |||||||||||||| || |||||||||||| |||| ||||||||||| | ||| | ||| |||||| |||||||  |    
T  8310772 gtcaagtagcctagcggttggagaaattcaccttaaa-gtaaaatagtggggtatccggggttcgaaccctgacccctgcatatataatacattatctct 8310674  T
Q  201 tatcaagtga 210  Q
    || |||||||    
T  8310673 taccaagtga 8310664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 21361724 - 21361656
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    ||||||||||||| |||||||| ||||||||||||||| | |||||||||||| || | ||||||||||    
T  21361724 gtcaagtagcctaacggctgaataaattcaccttaaagattaaatagtggggtatctggggttcgaacc 21361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 35195587 - 35195707
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||||||||  | ||||| ||||||||||||||  ||||| |||| || ||||||||||| || || | ||| ||  ||||||||||| |    
T  35195587 gtcaagtagcctagcggctagagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccct 35195686  T
Q  201 tatcaagtgaactaaactcac 221  Q
    ||| |||||| |||| |||||    
T  35195687 tattaagtgagctaagctcac 35195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 15417793 - 15417912
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| | ||  | ||||||| ||||||| ||||  ||||||||||||||| |||||||||| |||| ||||  |||  ||||||||||||    
T  15417793 gtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctt 15417892  T
Q  201 tatcaagtgaactaaactca 220  Q
    || ||| ||| |||| ||||    
T  15417893 taccaaatgagctaagctca 15417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 24134600 - 24134675
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||| ||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  24134600 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 24134675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 43109214 - 43109340
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  | || |||||||| ||||||||||||||||| | ||  |||  |||||||||| |    
T  43109214 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccct 43109313  T
Q  201 tatcaagtgaactaaactcacggagac 227  Q
    || ||| ||| |||| |||| ||||||    
T  43109314 taccaaatgagctaagctcatggagac 43109340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 41160962 - 41160865
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||| ||| || ||||||||||||||||||||| ||||||||||| |||| || | ||||||| ||| | | | |||  ||||||||||||||    
T  41160962 gtcaagtagtctaacgactgaaaaaattcaccttaaagatgaaatagtggagtgttcgggattcgaactccgactcctgcatacataatgcattatcc 41160865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 42946443 - 42946540
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||||||| |||||  | ||||||||||| ||||||||  ||||||||||||| ||||| |||||| |||| | ||| ||  |||||||||||    
T  42946443 gtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatcc 42946540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 34702289 - 34702417
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||| |||| |||| || ||||||| ||||||| ||||  |||| |||||||| ||||||||||||||||| | ||  |||  |||||||||| |    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 34702388  T
Q  201 tatcaagtgaactaaactcacggagactt 229  Q
    || ||| ||| |||| |||| || |||||    
T  34702389 taccaaatgagctaagctcatggggactt 34702417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 34595941 - 34595866
Alignment:
Q  151 ggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacggaga 226  Q
    |||| |||||||| ||||||||| |||| ||| ||| |||||||||||||  |||| |||||||| ||||||||||    
T  34595941 ggtggccgaggtttgaaccccggaccttgcatatattatgcattatccttagtcaactgaactaagctcacggaga 34595866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 50065106 - 50065015
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaa 215  Q
    ||||||||||||||| ||||  ||||||||||||||| |||||||||||| || | ||  |||  |||||||||| ||||||| ||| ||||    
T  50065106 aaattcaccttaaagatgaataagtggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatcccttatcaaatgagctaa 50065015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 14262720 - 14262802
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaa 206  Q
    ||||||||||||||| ||||  ||| ||||||||| ||||||||||||| ||| | ||| |||  |||||||||| |||||||    
T  14262720 aaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatcccttatcaa 14262802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 32660948 - 32660858
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcacct-taaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgca 192  Q
    |||||||||||||| ||||  | |||||||||| | ||||||||| ||||||||||||| |||| ||||||| |||| | ||| |||||||||    
T  32660948 gtcaagtagcctagtggct--agaaattcacctcttaaggtgaaaaagtggggtgtccggggtttgaaccccagcccctgcatatataatgca 32660858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 7438740 - 7438660
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttaca 181  Q
    ||||||||| |||| |||| || ||||||||||| ||| ||||  |||||||||||||  |||||||||||| ||| ||||    
T  7438740 gtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctaca 7438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 10123029 - 10123109
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttaca 181  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||  | ||||||||||||| ||| ||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctaca 10123109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 15774311 - 15774387
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||| ||| ||||| | |||||||||| ||||    
T  15774311 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcct 15774387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 25031473 - 25031569
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatc 197  Q
    |||||| ||||||| ||||  | ||||||||||||||| ||||  |||||||||||||   ||||||||||||||| | ||  ||| ||||||||||    
T  25031473 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggaattcgaaccccggcccctgcacatattatgcattatc 25031569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 177
Target Start/End: Original strand, 19564146 - 19564177
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccct 177  Q
    ||||||||||||||||||||||||||||||||    
T  19564146 agtggggtgtccgaggttcgaaccccggccct 19564177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 40061562 - 40061487
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | |||| |||||||||| ||||  |||||||||||||  ||||||||||| ||||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagccc 40061487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 32635258 - 32635168
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcacct-taaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgca 192  Q
    |||||||||||||| ||||  | |||||||||| | ||||||||  ||||||||||||| ||||||||||||  ||| | ||| |||||||||    
T  32635258 gtcaagtagcctagtggct--agaaattcacctcttaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatatataatgca 32635168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 32711143 - 32711196
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccct 177  Q
    ||||||||||| ||||||||  ||||||||||| | ||||||||||||||||||    
T  32711143 aattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccct 32711196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 34560337 - 34560382
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaacc 169  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||    
T  34560337 aattcaccttataaggtgaataagtggggtgtccgaggttcgaacc 34560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 3347702 - 3347750
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||| ||||  |||||||||| || |||||||||||||    
T  3347702 aaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccg 3347750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 4354116 - 4354156
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  4354116 aaggtgaataagtggggtgtccgaagttcgaaccccggccc 4354156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 11405552 - 11405504
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  11405552 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 11405504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 17350157 - 17350105
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  17350157 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 17350105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 18512568 - 18512616
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  18512568 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 18512616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 23463985 - 23464037
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| || |||||  ||||||||||||| |||||||||||||||||    
T  23463985 aattcaccttataaagtgaacaagtggggtgtccggggttcgaaccccggccc 23464037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 32585428 - 32585376
Alignment:
Q  140 tgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgca 192  Q
    ||||| ||||||||||||| |||||||||||| |||| | ||| |||||||||    
T  32585428 tgaaaaagtggggtgtccggggttcgaacccctgcccctgcatttataatgca 32585376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 37733851 - 37733803
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  37733851 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccg 37733803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 39433454 - 39433410
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  39433454 aattcaccttataaggtgaataagtggggtgtccgaggttcgaac 39433410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 39434714 - 39434670
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaac 168  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  39434714 aattcaccttataaggtgaataagtggggtgtccgaggttcgaac 39434670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 44732710 - 44732678
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||||||||||| |||||||||||||||||||    
T  44732710 agtggggtgtccggggttcgaaccccggccctt 44732678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 50199487 - 50199527
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||  ||||||||||||| |||||||||||||||||    
T  50199487 aaggtgaataagtggggtgtccggggttcgaaccccggccc 50199527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 7164812 - 7164700
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatccttt 201  Q
    |||||||| |||||||||  | ||||||||||||||||||||  |||||||||  || ||||||||| ||||||| ||||| || |||||||||||| ||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtggtcggggttcgaactccggcccctacatata-aatgcattatccctt 7164714  T
Q  202 atcaagtgaactaa 215  Q
    ||||| ||| ||||    
T  7164713 atcaaatgagctaa 7164700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 6228236 - 6228311
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  6228236 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 6228311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 18903343 - 18903418
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  18903343 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 18903418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 5641666 - 5641774
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    ||||||||| |||||||||  | ||||||||||||||||||||  |||||||||||||  ||||||||||||| || | |||  || ||||||||||| |    
T  5641666 gtcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggagttcgaaccccggtcc-tgcataaattatgcattatccat 5641764  T
Q  201 tatcaagtga 210  Q
    || |||||||    
T  5641765 taccaagtga 5641774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 17217077 - 17216958
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctt 200  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  |||||||||||||  |||||||| ||| ||| ||||  ||| ||||||||||| |    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccct 17216978  T
Q  201 tatcaagtgaactaaactca 220  Q
    || ||| ||| |||| ||||    
T  17216977 taccaaatgagctaagctca 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 20415538 - 20415613
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||| ||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| ||||||||||| |||||    
T  20415538 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggccc 20415613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 4854305 - 4854357
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||| ||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  4854305 aaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 4854357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 6530203 - 6530255
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  |||||||||||||||||| ||||||||||||    
T  6530203 aattcaccttataaggtgaataagtggggtgtccgaggtttgaaccccggccc 6530255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 9491746 - 9491810
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||| | |||||||||| ||||    
T  9491746 aaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattgtcct 9491810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 31705976 - 31705924
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcc 198  Q
    ||||||||||||| ||||||||||||| ||| ||||| ||||||||| |||||    
T  31705976 agtggggtgtccgtggttcgaaccccgacccctacatatataatgcaatatcc 31705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 11552990 - 11552915
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||| |||| ||||  ||||||| ||||||||| ||||  ||||||||| | | |||||||||||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtgcctggggttcgaaccccggccc 11552915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 5757847 - 5757917
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    |||||||||||| ||||||  | |||||||||||||| |||||  |||| ||||| || ||||||||||||    
T  5757847 gtcaagtagcctggcggctagagaaattcaccttaaatgtgaataagtgaggtgttcggggttcgaacccc 5757917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 29430311 - 29430349
Alignment:
Q  133 ttaaaggtgaaatagtggggtgtccgaggttcgaacccc 171  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  29430311 ttaaaggtgaataagtggggtgtccgaggttcgaacccc 29430349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 30705037 - 30704961
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgg 223  Q
    ||||||||||||| ||||||||||||||||| ||||| ||  ||||| |||||  || ||| |||||||| |||||||    
T  30705037 agtggggtgtccggggttcgaaccccggcccctacatataacatgcaatatcc-ctaccaactgaactaagctcacgg 30704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 3448448 - 3448396
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||| ||||  ||||||||||||| |||||||||||||||||    
T  3448448 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggccc 3448396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 3640591 - 3640559
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||| |||||||||||||||||||||||||||    
T  3640591 agtggagtgtccgaggttcgaaccccggccctt 3640559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 3974537 - 3974489
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    ||||||||||||||| ||||  ||||||| |||||| ||||||||||||    
T  3974537 aaattcaccttaaagatgaataagtggggagtccgaagttcgaaccccg 3974489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 6658521 - 6658594
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | |||||| | || |||| |||  ||||||||||||| |||||||||||||||||    
T  6658521 gtcaagtagcctagtggct--agaaattctcttttaaggagaataagtggggtgtccggggttcgaaccccggccc 6658594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 12089193 - 12089141
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||| |||||||    
T  12089193 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccggccc 12089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 18904682 - 18904758
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||   |||||||||||||||| ||||| | |||||||||| ||||    
T  18904682 aattcaccttataaggtgaataagtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcct 18904758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 19279533 - 19279493
Alignment:
Q  136 aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||  ||||||||||||||||||||||| |||||||    
T  19279533 aaggtgaataagtggggtgtccgaggttcgaactccggccc 19279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 22983676 - 22983624
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||| ||||  ||||||||||||| |||||||||||||||||    
T  22983676 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggccc 22983624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 23804732 - 23804784
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||| ||||  ||||||||||||| |||||||||||||||||    
T  23804732 aattcaccttataagatgaataagtggggtgtccggggttcgaaccccggccc 23804784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 25020527 - 25020579
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||| |||||    
T  25020527 aattcaccttataaggtgaataagtggggtgtccggggttcgaacccaggccc 25020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 27667237 - 27667189
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  27667237 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 27667189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 32470781 - 32470689
Alignment:
Q  124 aaattcaccttaaaggtgaaatagt-ggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaa 215  Q
    ||||||||||||||||||||  ||| |||||||| ||||||| |||| | |||| | ||| ||| ||||||||| ||||| |||  |||||||    
T  32470781 aaattcaccttaaaggtgaataagtaggggtgtctgaggttcaaacctcagcccctgcatatattatgcattattctttaccaaaggaactaa 32470689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 419831 - 419756
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 419756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 15680877 - 15680943
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaa 167  Q
    ||||||||||||||||| |  | ||||||||||||||||||||  ||||||||||||||||||||||    
T  15680877 gtcaagtagcctagcggttagagaaattcaccttaaaggtgaataagtggggtgtccgaggttcgaa 15680943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 31250266 - 31250191
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||| ||||||| ||||  | ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  31250266 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 31250191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 34729567 - 34729482
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtga 210  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||| ||| | ||| ||  ||||||||||| ||| |||||||    
T  34729567 aaattcaccttaaaggtgaataagtggggtgtccg-ggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtga 34729482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 5039799 - 5039722
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||||||| |||| ||||  | ||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccgaagttcgaaccccggccctt 5039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 8015931 - 8015855
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||    
T  8015931 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataatgcattatcct 8015855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 38503256 - 38503308
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  38503256 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 38503308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 43227962 - 43227910
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  43227962 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccc 43227910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 20191537 - 20191435
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgg 223  Q
    ||||| ||||||||||||||  ||||| ||||||| ||||||||||||| ||| | ||| || |||||||||||| ||| |||||||  ||| ||||| |    
T  20191537 aaatttaccttaaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatata-aatgcattatcccttaccaagtgagttaagctcacag 20191439  T
Q  224 agac 227  Q
    ||||    
T  20191438 agac 20191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 35168632 - 35168734
Alignment:
Q  125 aattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgga 224  Q
    |||||||||||||||||||  ||||||||||||| |||||||||| ||| || |  ||  || |||  | ||||| || |||||||||||| ||||||||    
T  35168632 aattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcggtccatggatagattatgtgtcatcctctaccaagtgaactaagctcacgga 35168731  T
Q  225 gac 227  Q
    |||    
T  35168732 gac 35168734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 38618680 - 38618734
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccctt 178  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  38618680 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggccctt 38618734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 20145557 - 20145589
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccctt 178  Q
    |||||||||||||||||||||||||||||||||    
T  20145557 agtggggtgtccgaggttcgaaccccggccctt 20145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 29096307 - 29096383
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatct-ataatgcattatcct 199  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||| ||||||||| ||| | |||||||||| ||||    
T  29096307 aattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccttgcatataataatgcattgtcct 29096383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 17077480 - 17077409
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||||| ||||  | ||||||||||| ||| ||||  ||||||||||||| |||||||| ||||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccg 17077409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 26302491 - 26302546
Alignment:
Q  123 aaaattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccct 177  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||    
T  26302491 aaaattcaccttataagatgaataagtggggtgtccgaggttcgaactccggccct 26302546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 6447501 - 6447531
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||||||||||||||    
T  6447501 agtggggtgtccgaggttcgaaccccggccc 6447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 6614059 - 6614089
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||||||||||||||||||||||||||    
T  6614059 agtggggtgtccgaggttcgaaccccggccc 6614089  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 9628235 - 9628165
Alignment:
Q  102 tcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccg 172  Q
    |||||||||||| || || || || |||||||||||||||||  | | ||||||| |||||||||||||||    
T  9628235 tcaagtagcctatcgactaaagaatttcaccttaaaggtgaataaatagggtgtctgaggttcgaaccccg 9628165  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 1463967 - 1463915
Alignment:
Q  124 aaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    |||||||| || || |||||  ||||||||||||| |||||||||||||||||    
T  1463967 aaattcacttttaaagtgaataagtggggtgtccggggttcgaaccccggccc 1463915  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 12256474 - 12256514
Alignment:
Q  103 caagtagcctagcggctgaaaaaattcaccttaaaggtgaa 143  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  12256474 caagtagcctagcggctagagaaattcaccttaaaggtgaa 12256514  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 12891634 - 12891598
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacat 182  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  12891634 agtggggtgtccggggttcgaaccccggcccctacat 12891598  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 17891852 - 17891900
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  17891852 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 17891900  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 18478099 - 18478047
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||  |||||||||||||||||    
T  18478099 aattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggccc 18478047  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 19059003 - 19059055
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||||  |||||||||||||||||    
T  19059003 aattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggccc 19059055  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 23937926 - 23937974
Alignment:
Q  146 agtggggtgtccgaggttcgaaccccggcccttacatctataatgcatt 194  Q
    ||||||||||||| ||||||||||||||||| | ||| || ||||||||    
T  23937926 agtggggtgtccggggttcgaaccccggcccctgcatataaaatgcatt 23937974  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 28604410 - 28604481
Alignment:
Q  151 ggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttatcaagtgaactaaactcacgg 223  Q
    |||||||| | |||||||||||| |||||||| ||| ||||||| | ||||| ||| ||| ||||||||||||    
T  28604410 ggtgtccgtgattcgaaccccggaccttacatttattatgcattgt-ctttaccaactgagctaaactcacgg 28604481  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 32158413 - 32158465
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  |||||||||| || |||||||||||||||||    
T  32158413 aattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggccc 32158465  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 33729874 - 33729822
Alignment:
Q  125 aattcacctta-aaggtgaaatagtggggtgtccgaggttcgaaccccggccc 176  Q
    ||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||    
T  33729874 aattcaccttataaggtgaataagtggggtgtctgagattcgaaccccggccc 33729822  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 42209035 - 42208959
Alignment:
Q  101 gtcaagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggccct 177  Q
    |||||||||||||| | ||  | ||||||||||||||| ||||  |||| ||||||||  ||||||||| |||||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcggccct 42208959  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 22575 - 22464
Alignment:
Q  104 aagtagcctagcggctgaaaaaattcaccttaaaggtgaaatagtggggtgtccgaggttcgaaccccggcccttacatctataatgcattatcctttat 203  Q
    |||||| |||||| || |||||||||||||||||  ||||  |||||| |||| | |||||||||| | |||| ||||| ||  ||| ||||||| |||     
T  22575 aagtagactagcgactaaaaaaattcaccttaaaaatgaataagtgggatgtctggggttcgaacctcagcccctacatataatatgtattatcccttac 22476  T
Q  204 caagtgaactaa 215  Q
    ||||||| ||||    
T  22475 caagtgagctaa 22464  T

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