View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18198_low_21 (Length: 247)
Name: NF18198_low_21
Description: NF18198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18198_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 41251077 - 41251301
Alignment:
| Q |
1 |
aagttggctttaatttgcagctatactaaggataatactttgtttttaacgataagcataatcttttgttatgatactatactagagtcatgtgaaaatc |
100 |
Q |
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| T |
41251077 |
aagttggctttaatttgcagctatactaaggataatactttgtttttgacgataagcataatattttgttatgatactatactagagtcatgtgaaaatc |
41251176 |
T |
|
| Q |
101 |
attgctggctctatacatttttccttttatacgcattttatagttagatcgaatatcttgaaaagaaaacacattaattattagttgctagctttacaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41251177 |
attgctggctctatacatttttccttttatacgcattttatagttagatcgaatatcttgaaaagaaaacacattaattattagttgctagctttacaac |
41251276 |
T |
|
| Q |
201 |
tatatttcctataaagttttataac |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
41251277 |
tatatttcctataaagttttataac |
41251301 |
T |
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